Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6908145
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 609258 609384 -487110 -697621 -702571 -684157 +126 -44.4243% -53.3755% -53.5515% -52.8902% +0.0207%
MTAC_3P_Alternating 586322 615762 610710 599881 652779 653162 +66840 +37400 +42452 +53281 +383 +11.3999% +6.0738% +6.9513% +8.8819% +0.0587%
MTAC_3P_Standard 596590 623022 617574 607435 657870 658420 +61830 +35398 +40846 +50985 +550 +10.3639% +5.6817% +6.6139% +8.3935% +0.0836%
MTAC_Yeast_Alternating_3min 137548 136839 135560 153375 153383 +15835 +16544 +17823 +8 +11.5123% +12.0901% +13.1477% +0.0052%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 172424 172345 +16704 +15794 +15836 +17310 -79 +10.7324% +10.0887% +10.1183% +11.1652% -0.0458%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 154988 155894 +17385 +16509 +16602 +18009 +906 +12.5515% +11.8442% +11.9188% +13.0609% +0.5846%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 174769 174780 +15818 +16048 +15620 +16858 +11 +9.9508% +10.1101% +9.8140% +10.6749% +0.0063%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3524144
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1352361 1355640 +332904 +200971 +231767 +171556 +3279 +32.5503% +17.4051% +20.6222% +14.4885% +0.2425%
SCIEX_3P 672242 749525 722698 714454 788797
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 57592 57261 +16379 +15561 +14836 +15161 -331 +40.0641% +37.3165% +34.9699% +36.0119% -0.5747%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 55514 55247 +14178 +12845 +13224 +14095 -267 +34.5224% +30.2934% +31.4685% +34.2511% -0.4810%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 45794 45920 +37180 +22805 +22905 +23007 +126 +425.4005% +98.6589% +99.5221% +100.4102% +0.2751%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 30986 30672 +13737 +13119 +12263 +12324 -314 +81.1160% +74.7394% +66.6142% +67.1681% -1.0134%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 121766 121474 +21566 +18583 +22491 +22826 -292 +21.5859% +18.0609% +22.7221% +23.1388% -0.2398%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 90579 90629 +19531 +17901 +19184 +19503 +50 +27.4705% +24.6136% +26.8514% +27.4204% +0.0552%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 132122 132706 +27002 +26209 +27084 +28272 +584 +25.5449% +24.6101% +25.6424% +27.0716% +0.4420%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 136464 136580 +21423 +19264 +22258 +23499 +116 +18.6033% +16.4206% +19.4696% +20.7807% +0.0850%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 20212 19921 +9727 +9115 +8683 +8688 -291 +95.4189% +84.3513% +77.2646% +77.3435% -1.4397%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 22233 22174 +7367 +6741 +6133 +6475 -59 +49.7535% +43.6791% +38.2333% +41.2447% -0.2654%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 9573 9579 +8318 +7547 +7129 +7193 +6 +659.6352% +371.4075% +290.9796% +301.4669% +0.0627%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16464 16757 +15321 +11974 +11067 +11026 +293 +1066.9220% +250.3450% +194.4991% +192.3923% +1.7796%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 33931 33849 +12139 +11954 +11269 +11386 -82 +55.9143% +54.5969% +49.9070% +50.6878% -0.2417%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 34373 34347 +8487 +8204 +8087 +8722 -26 +32.8190% +31.3812% +30.7959% +34.0371% -0.0756%
SCP_Astral_500pg_3ms 3484 6898 6834 21584 21443 +17959 +14545 +14609 -141 +515.4707% +210.8582% +213.7694% -0.6533%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 30704 30668 +19969 +19194 +17786 +17779 -36 +186.6436% +167.2826% +138.0686% +137.9393% -0.1172%
SCP_Astral_MBR 92167 93585 91884 90864 114837 114520 +22353 +20935 +22636 +23656 -317 +24.2527% +22.3700% +24.6354% +26.0345% -0.2760%
Seer_Astral_45 2512737 3124006 3135497 2971207 3097308
Seer_Astral_single 56699 55793 55891 65642 65643 +8944 +9850 +9752 +1 +15.7745% +17.6545% +17.4482% +0.0015%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17806832
EWZ_2P_MBR_Exploris 1776128 1934220 1935694 +159566 +1474 +8.9839% +0.0762%
EWZ_2P_MBR_Exploris_Human 836809 910963 911031 +74222 +68 +8.8696% +0.0075%
EWZ_2P_MBR_Exploris_YeastHuman 914924 1013389 1013017 +98093 -372 +10.7214% -0.0367%
MacCoss_Eclipse_Normalization_noNorm 2078034 2344055 2340237 +262203 -3818 +12.6178% -0.1629%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2344055 2340237 +262203 -3818 +12.6178% -0.1629%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 106978
KEAP1KO_Eclipse 111504 133619 131359 132031 121976 122170 +10666 -11449 -9189 -9861 +194 +9.5656% -8.5684% -6.9953% -7.4687% +0.1590%
MTAC_3P_Alternating 108267 117352 114659 114816 129393 129450 +21183 +12098 +14791 +14634 +57 +19.5655% +10.3092% +12.9000% +12.7456% +0.0441%
MTAC_3P_Standard 110265 118693 115800 116148 131045 130945 +20680 +12252 +15145 +14797 -100 +18.7548% +10.3224% +13.0786% +12.7398% -0.0763%
MTAC_Yeast_Alternating_3min 48858 49032 48995 57766 57838 +8980 +8806 +8843 +72 +18.3798% +17.9597% +18.0488% +0.1246%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 64336 64403 +10434 +9328 +8563 +8519 +67 +19.3333% +16.9369% +15.3349% +15.2441% +0.1041%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 59031 59160 +10539 +9495 +8871 +8700 +129 +21.6758% +19.1181% +17.6400% +17.2414% +0.2185%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 65297 65179 +10119 +9260 +8472 +8352 -118 +18.3781% +16.5597% +14.9400% +14.6972% -0.1807%
Olsen_Astral_3P 198770 231103 234505 234149 250788
Olsen_Exploris_3P 51272 58784 55047 58593 75777 75936 +24664 +17152 +20889 +17343 +159 +48.1042% +29.1780% +37.9476% +29.5991% +0.2098%
SCIEX_3P 82206 93920 87927 87858 109922
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 22358 22269 +7829 +7311 +7020 +6562 -89 +54.2175% +48.8769% +46.0358% +41.7776% -0.3981%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 21182 21037 +6554 +5972 +6121 +5967 -145 +45.2531% +39.6416% +41.0365% +39.5952% -0.6845%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 18920 18988 +10248 +9612 +9599 +9624 +68 +117.2540% +102.5171% +102.2367% +102.7766% +0.3594%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 18076 17887 +8989 +8628 +8103 +8077 -189 +101.0227% +93.1850% +82.8189% +82.3344% -1.0456%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 44916 44853 +9988 +8556 +10511 +10428 -63 +28.6476% +23.5722% +30.6068% +30.2919% -0.1403%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 33624 33644 +8995 +8178 +8525 +8421 +20 +36.4924% +32.1134% +33.9385% +33.3862% +0.0595%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 49845 50060 +13372 +12384 +12411 +12639 +215 +36.4479% +32.8697% +32.9650% +33.7752% +0.4313%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 50398 50469 +10313 +8924 +10426 +10576 +71 +25.6823% +21.4803% +26.0370% +26.5109% +0.1409%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 8482 8299 +4633 +4350 +4090 +4053 -183 +126.3775% +110.1545% +97.1727% +95.4545% -2.1575%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 9024 8906 +3607 +3295 +3051 +2840 -118 +68.0694% +58.7239% +52.1093% +46.8183% -1.3076%
SCP_Astral_250pg_3ms 675 721 908 879 4615 4596 +3921 +3875 +3688 +3717 -19 +580.8889% +537.4480% +406.1674% +422.8669% -0.4117%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6914 7139 +5703 +5401 +4994 +4976 +225 +397.1448% +310.7595% +232.8205% +230.0509% +3.2543%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 13595 13520 +5726 +5548 +5268 +5114 -75 +73.4668% +69.5936% +63.8391% +60.8375% -0.5517%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 13338 13336 +4178 +3994 +3965 +3922 -2 +45.6213% +42.7532% +42.3114% +41.6614% -0.0150%
SCP_Astral_500pg_3ms 1846 2600 2586 9353 9562 +7716 +6962 +6976 +209 +417.9848% +267.7692% +269.7602% +2.2346%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 12715 12589 +8715 +8434 +7815 +7784 -126 +224.9613% +202.9844% +163.6992% +161.9979% -0.9910%
SCP_Astral_MBR 24110 24991 24570 24544 32322 32468 +8358 +7477 +7898 +7924 +146 +34.6661% +29.9188% +32.1449% +32.2849% +0.4517%
Seer_Astral_45 69584 90103 87204 87620 97031
Seer_Astral_single 56699 55793 55891 65642 65643 +8944 +9850 +9752 +1 +15.7745% +17.6545% +17.4482% +0.0015%
YEAST_KO_Astral 66823 87888 87428 86498 88267
EWZ_2P_MBR_Exploris 55271 65021 65048 +9777 +27 +17.6892% +0.0415%
EWZ_2P_MBR_Exploris_Human 48465 56314 56331 +7866 +17 +16.2303% +0.0302%
EWZ_2P_MBR_Exploris_YeastHuman 51246 60605 60771 +9525 +166 +18.5868% +0.2739%
MacCoss_Eclipse_Normalization_noNorm 73278 83711 83763 +10485 +52 +14.3085% +0.0621%
MacCoss_Eclipse_Normalization_yesNorm 73278 83711 83763 +10485 +52 +14.3085% +0.0621%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 629764
KEAP1KO_Eclipse 87920 92888 93982 93441 41873 41881 -46039 -51007 -52101 -51560 +8 -52.3646% -54.9124% -55.4372% -55.1792% +0.0191%
MTAC_3P_Alternating 63773 63974 63611 63015 67275 67400 +3627 +3426 +3789 +4385 +125 +5.6874% +5.3553% +5.9565% +6.9587% +0.1858%
MTAC_3P_Standard 64317 64464 64219 63385 67724 67801 +3484 +3337 +3582 +4416 +77 +5.4169% +5.1765% +5.5778% +6.9669% +0.1137%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12891 12909 +842 +939 +969 +18 +6.9777% +7.8446% +8.1156% +0.1396%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 13135 13177 +745 +706 +815 +849 +42 +5.9926% +5.6611% +6.5928% +6.8868% +0.3198%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12759 12717 +709 +670 +757 +749 -42 +5.9044% +5.5616% +6.3294% +6.2584% -0.3292%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 13236 13245 +684 +780 +768 +835 +9 +5.4454% +6.2575% +6.1553% +6.7284% +0.0680%
Olsen_Astral_3P 236395 245756 242430 240719 242703
Olsen_Exploris_3P 146224 153534 153990 155827 161287 161370 +15146 +7836 +7380 +5543 +83 +10.3581% +5.1038% +4.7925% +3.5571% +0.0515%
SCIEX_3P 70810 74366 72157 71550 76034
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 12208 12032 +2869 +2504 +2447 +2698 -176 +31.3107% +26.2804% +25.5295% +28.9051% -1.4417%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11913 11930 +2632 +2169 +2518 +2377 +17 +28.3072% +22.2211% +26.7531% +24.8822% +0.1427%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 10104 10141 +7691 +4057 +3894 +4025 +37 +313.9184% +66.6831% +62.3339% +65.8110% +0.3662%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6934 6907 +2204 +2319 +1949 +1984 -27 +46.8637% +50.5449% +39.3102% +40.3006% -0.3894%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17919 17876 +1686 +1596 +1851 +1821 -43 +10.4138% +9.8034% +11.5507% +11.3423% -0.2400%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 15431 15415 +1816 +1574 +1727 +1744 -16 +13.3539% +11.3720% +12.6169% +12.7569% -0.1037%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 18446 18474 +2222 +2198 +2357 +2549 +28 +13.6722% +13.5045% +14.6243% +16.0063% +0.1518%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18932 18891 +1874 +1713 +1978 +2146 -41 +11.0125% +9.9721% +11.6951% +12.8158% -0.2166%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5675 5678 +2031 +1765 +1814 +2139 +3 +55.6896% +45.1061% +46.9462% +60.4408% +0.0529%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 6227 6215 +1915 +1612 +1418 +1238 -12 +44.5349% +35.0206% +29.5601% +24.8744% -0.1927%
SCP_Astral_250pg_3ms 576 22 936 741 3102 3181 +2605 +3159 +2245 +2440 +79 +452.2569% +14359.0909% +239.8504% +329.2848% +2.5467%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4896 5025 +4388 +2945 +2996 +2979 +129 +688.8540% +141.5865% +147.6589% +145.6012% +2.6348%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 8467 8454 +2209 +2108 +2438 +2327 -13 +35.3723% +33.2178% +40.5253% +37.9794% -0.1535%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8529 8557 +1835 +1828 +1545 +1534 +28 +27.2984% +27.1660% +22.0337% +21.8425% +0.3283%
SCP_Astral_500pg_3ms 982 2365 2177 5861 5906 +4924 +3541 +3729 +45 +501.4257% +149.7252% +171.2908% +0.7678%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7952 7849 +4141 +3842 +3804 +3931 -103 +111.6775% +95.8822% +94.0420% +100.3318% -1.2953%
SCP_Astral_MBR 20165 20129 20074 19793 21827 21696 +1531 +1567 +1622 +1903 -131 +7.5924% +7.7848% +8.0801% +9.6145% -0.6002%
Seer_Astral_45 225377 241455 241952 237727 240131
Seer_Astral_single 4685 4700 4632 5275 5269 +584 +569 +637 -6 +12.4653% +12.1064% +13.7522% -0.1137%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1359370
EWZ_2P_MBR_Exploris 245259 255021 254107 +8848 -914 +3.6076% -0.3584%
EWZ_2P_MBR_Exploris_Human 115447 118330 118132 +2685 -198 +2.3257% -0.1673%
EWZ_2P_MBR_Exploris_YeastHuman 128968 135107 135119 +6151 +12 +4.7694% +0.0089%
MacCoss_Eclipse_Normalization_noNorm 178174 196412 196256 +18082 -156 +10.1485% -0.0794%
MacCoss_Eclipse_Normalization_yesNorm 178174 196412 196256 +18082 -156 +10.1485% -0.0794%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6462
KEAP1KO_Eclipse 7845 8175 8155 8203 7477 7484 -361 -691 -671 -719 +7 -4.6017% -8.4526% -8.2281% -8.7651% +0.0936%
MTAC_3P_Alternating 11361 11494 11351 11338 12368 12344 +983 +850 +993 +1006 -24 +8.6524% +7.3952% +8.7481% +8.8728% -0.1940%
MTAC_3P_Standard 11473 11560 11477 11396 12441 12451 +978 +891 +974 +1055 +10 +8.5244% +7.7076% +8.4865% +9.2576% +0.0804%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4465 4473 +345 +381 +373 +8 +8.3576% +9.3109% +9.0976% +0.1792%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4527 4545 +330 +297 +327 +331 +18 +7.8292% +6.9915% +7.7525% +7.8548% +0.3976%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4415 4402 +327 +268 +312 +305 -13 +8.0245% +6.4828% +7.6284% +7.4445% -0.2945%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4552 4549 +300 +312 +305 +318 -3 +7.0605% +7.3637% +7.1866% +7.5160% -0.0659%
Olsen_Astral_3P 13820 14378 14293 14296 14857
Olsen_Exploris_3P 7255 7582 7340 7479 8252 8224 +969 +642 +884 +745 -28 +13.3563% +8.4674% +12.0436% +9.9612% -0.3393%
SCIEX_3P 8652 9109 8679 8618 9806
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4420 4349 +1104 +960 +938 +1031 -71 +34.0216% +28.3269% +27.4993% +31.0729% -1.6063%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4306 4309 +1055 +876 +1018 +875 +3 +32.4216% +25.5170% +30.9328% +25.4805% +0.0697%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3809 3849 +1399 +1453 +1399 +1452 +40 +57.1020% +60.6427% +57.1020% +60.5757% +1.0501%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3770 3751 +1243 +1315 +1117 +1109 -19 +49.5614% +53.9819% +42.4070% +41.9758% -0.5040%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6244 6238 +659 +582 +734 +692 -6 +11.8122% +10.2900% +13.3358% +12.4775% -0.0961%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5438 5422 +701 +584 +639 +611 -16 +14.8485% +12.0711% +13.3598% +12.7001% -0.2942%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6505 6536 +925 +881 +940 +983 +31 +16.4855% +15.5791% +16.7977% +17.7021% +0.4766%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6630 6625 +779 +676 +782 +820 -5 +13.3254% +11.3633% +13.3835% +14.1258% -0.0754%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 2128 2136 +844 +712 +730 +848 +8 +65.3251% +50% +51.9203% +65.8385% +0.3759%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2323 2326 +758 +666 +568 +453 +3 +48.3418% +40.1205% +32.3094% +24.1858% +0.1291%
SCP_Astral_250pg_3ms 307 8 350 283 1306 1366 +1059 +1358 +1016 +1083 +60 +344.9511% +16975% +290.2857% +382.6855% +4.5942%
SCP_Astral_250pg_6ms 637 756 751 766 1876 1943 +1306 +1187 +1192 +1177 +67 +205.0235% +157.0106% +158.7217% +153.6554% +3.5714%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 3130 3113 +906 +838 +944 +883 -17 +41.0512% +36.8352% +43.5224% +39.5964% -0.5431%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 3133 3132 +729 +744 +655 +593 -1 +30.3371% +31.1558% +26.4433% +23.3557% -0.0319%
SCP_Astral_500pg_3ms 525 902 828 2319 2336 +1811 +1434 +1508 +17 +344.9524% +158.9800% +182.1256% +0.7331%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 3007 2940 +1622 +1493 +1454 +1505 -67 +123.0653% +103.1790% +97.8466% +104.8780% -2.2281%
SCP_Astral_MBR 4708 4720 4712 4715 5341 5303 +595 +583 +591 +588 -38 +12.6381% +12.3517% +12.5424% +12.4708% -0.7115%
Seer_Astral_45 5802 6297 6122 6133 6500
Seer_Astral_single 4685 4700 4632 5275 5269 +584 +569 +637 -6 +12.4653% +12.1064% +13.7522% -0.1137%
YEAST_KO_Astral 4565 4795 4676 4673 4789
EWZ_2P_MBR_Exploris 7041 7537 7473 +432 -64 +6.1355% -0.8491%
EWZ_2P_MBR_Exploris_Human 6167 6401 6381 +214 -20 +3.4701% -0.3125%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7414 7432 +545 +18 +7.9135% +0.2428%
MacCoss_Eclipse_Normalization_noNorm 5804 6518 6522 +718 +4 +12.3708% +0.0614%
MacCoss_Eclipse_Normalization_yesNorm 5804 6518 6522 +718 +4 +12.3708% +0.0614%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 629753
KEAP1KO_Eclipse 41870 41876 +6
MTAC_3P_Alternating 67267 67392 +125
MTAC_3P_Standard 67713 67789 +76
MTAC_Yeast_Alternating_3min 12878 12893 +15
MTAC_Yeast_Alternating_5min 13124 13167 +43
MTAC_Yeast_Standard_3min 12741 12709 -32
MTAC_Yeast_Standard_5min 13232 13243 +11
Olsen_Astral_3P 242617
Olsen_Exploris_3P 161285 161369 +84
SCIEX_3P 76024
SCP_Astral_1000pg_12ms 12202 12027 -175
SCP_Astral_1000pg_24ms 11911 11930 +19
SCP_Astral_1000pg_3ms 10099 10130 +31
SCP_Astral_1000pg_6ms 6912 6883 -29
SCP_Astral_10ng_12ms 17915 17873 -42
SCP_Astral_10ng_24ms 15429 15413 -16
SCP_Astral_10ng_3ms 18431 18458 +27
SCP_Astral_10ng_6ms 18923 18877 -46
SCP_Astral_250pg_12ms 5673 5676 +3
SCP_Astral_250pg_24ms 6227 6211 -16
SCP_Astral_250pg_3ms 3098 3179 +81
SCP_Astral_250pg_6ms 4889 5021 +132
SCP_Astral_500pg_12ms 8465 8453 -12
SCP_Astral_500pg_24ms 8528 8556 +28
SCP_Astral_500pg_3ms 5855 5896 +41
SCP_Astral_500pg_6ms 7949 7847 -102
SCP_Astral_MBR 21825 21691 -134
Seer_Astral_45 240116
Seer_Astral_single 5275 5269 -6
YEAST_KO_Astral 1359356
EWZ_2P_MBR_Exploris 254989 254077 -912
EWZ_2P_MBR_Exploris_Human 118299 118103 -196
EWZ_2P_MBR_Exploris_YeastHuman 135075 135088 +13
MacCoss_Eclipse_Normalization_noNorm 196405 196250 -155
MacCoss_Eclipse_Normalization_yesNorm 196405 196250 -155

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0009 -0.0002 +0.0010 +0.0008
KEAP1KO_Eclipse_Entrapment -0.0007 0.0002 0.0005 +0.0012 +0.0003
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0004 -0.0004 +0.0001 -0.0003 +0.0006 +0.0003 +0.0000
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0008 +0.0006 -0.0013 -0.0002 -0.0001 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0023 -0.0018 -0.0003 +0.0001 +0.0008 +0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0010 -0.0012 -0.0008 +0.0001 +0.0002 +0.0003 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0015 -0.0017 +0.0002 -0.0004 -0.0005 +0.0003 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0013 -0.0010 +0.0001 +0.0010 +0.0015 +0.0003
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 -0.0003 -0.0009 -0.0002
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0013
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 -0.0002 -0.0001 +0.0001 -0.0003 +0.0010 -0.0005 +0.0002
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0003
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0009 -0.0015 +0.0007 +0.0014 -0.0006
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0001 -0.0003 +0.0051 +0.0030 +0.0028 +0.0043 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0004 -0.0007 +0.0022 +0.0040 +0.0022 +0.0031 -0.0012
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0015 -0.0011 -0.0009 +0.0000 +0.0025 +0.0015 +0.0004
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0021 -0.0010 +0.0012 +0.0007 +0.0014 +0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0009 -0.0012 +0.0008 -0.0021 +0.0003 +0.0001 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0016 -0.0018 +0.0006 +0.0008 -0.0000 -0.0001 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0005 -0.0005 +0.0003 -0.0005 +0.0017 +0.0007 +0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0018 0.0003 +0.0042 +0.0043 +0.0000 +0.0055 -0.0015
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 0.0000 -0.0007 -0.0005 +0.0005 +0.0017 +0.0024 -0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 -0.0013 -0.0013 +0.0056 -0.0013 +0.0000
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0018 0.0002 +0.0053 +0.0029 +0.0052 -0.0015
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0010 0.0004 +0.0026 +0.0014 +0.0032 +0.0030 -0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0007 -0.0005 +0.0007 +0.0019 +0.0007 +0.0006 -0.0012
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0003 0.0016 +0.0029 +0.0038 +0.0051 +0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0013 0.0015 +0.0045 +0.0047 +0.0029 +0.0001
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0002 0.0003 +0.0030 +0.0023 +0.0018 +0.0026 +0.0006
Seer_Astral_45_Entrapment -0.0023 -0.0003
Seer_Astral_single_Entrapment -0.0022 0.0015 0.0018 +0.0040 +0.0004
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0005
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0008 -0.0011 +0.0015 -0.0003
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0023 -0.0037 -0.0008 -0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0033 -0.0037 -0.0027 -0.0026 -0.0043 -0.0045 -0.0004
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0033 -0.0023 -0.0010 +0.0002 +0.0006 +0.0003 +0.0010
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0058 -0.0053 +0.0012 -0.0001 -0.0005 +0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0004 -0.0013 +0.0028 +0.0025 +0.0035 +0.0020 -0.0009
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0053 -0.0030 +0.0028 +0.0017 -0.0010 -0.0002 +0.0023
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0031 -0.0018 +0.0018 +0.0027 +0.0038 +0.0014
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0035 -0.0024 -0.0021 +0.0011
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0031
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0032 -0.0023 +0.0006 -0.0021 +0.0006 -0.0014 +0.0009
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0031
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 0.0010 -0.0012 +0.0037 +0.0029 +0.0030 -0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0051 -0.0059 +0.0011 -0.0001 +0.0011 +0.0012 -0.0008
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0033 -0.0036 +0.0024 +0.0023 +0.0036 +0.0036 -0.0003
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0027 -0.0012 +0.0006 +0.0038 +0.0031 +0.0033 +0.0015
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0061 -0.0059 -0.0004 -0.0019 -0.0005 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0046 -0.0042 -0.0009 -0.0019 -0.0025 +0.0003 +0.0004
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0029 -0.0032 +0.0004 +0.0041 +0.0034 +0.0029 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0050 -0.0032 +0.0023 -0.0012 +0.0022 +0.0015 +0.0019
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0005 0.0010 +0.0063 +0.0086 +0.0044 +0.0074 +0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0040 -0.0045 -0.0004 -0.0003 -0.0020 -0.0032 -0.0006
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 -0.0036 0.0000 +0.0028 +0.0000 +0.0085 +0.0000 +0.0036
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0009 0.0020 +0.0118 +0.0086 +0.0104 +0.0107 +0.0011
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0018 0.0000 +0.0036 +0.0040 -0.0014 +0.0020 +0.0018
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0023 -0.0034 -0.0014 -0.0033 +0.0017 +0.0028 -0.0011
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0021 0.0015 +0.0057 -0.0056 -0.0005 +0.0016 +0.0036
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0012 0.0015 +0.0060 +0.0061 +0.0023 +0.0071 +0.0003
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0031 -0.0041 +0.0019 -0.0011 -0.0015 +0.0009 -0.0010
Seer_Astral_45_Entrapment -0.0049 -0.0030
Seer_Astral_single_Entrapment -0.0074 0.0022 0.0018 +0.0092 -0.0004
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0062

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 0.0002 0.0004 +0.0016 +0.0002
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0001 0.0000 +0.0003 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0002 -0.0002 -0.0001 -0.0005 -0.0000 -0.0001 -0.0000
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0004 +0.0005 -0.0005 +0.0000 -0.0000 -0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0012 -0.0002 +0.0001 +0.0003 +0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0006 -0.0007 -0.0003 +0.0001 +0.0003 +0.0002 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0012 -0.0004 -0.0005 -0.0004 -0.0002 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0007 -0.0004 +0.0004 +0.0006 +0.0011 +0.0003
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0003 0.0001 -0.0002 -0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0006
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0004 0.0002 +0.0006 -0.0003 +0.0008 +0.0002 -0.0003
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0002
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0010 -0.0012 +0.0003 +0.0017 -0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0005 -0.0007 +0.0039 +0.0021 +0.0024 +0.0030 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0000 -0.0001 +0.0020 +0.0029 +0.0025 +0.0026 -0.0000
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0009 -0.0008 -0.0010 -0.0002 +0.0020 +0.0016 +0.0001
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0015 -0.0004 +0.0012 +0.0006 +0.0011 +0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0009 -0.0008 +0.0006 -0.0011 +0.0004 +0.0000 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0012 -0.0011 +0.0008 +0.0009 +0.0005 +0.0003 +0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0008 -0.0003 -0.0011 +0.0004 -0.0000 -0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0013 -0.0003 +0.0027 +0.0024 -0.0000 +0.0029 -0.0016
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 0.0002 -0.0004 +0.0003 +0.0005 +0.0010 +0.0010 -0.0005
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0002 -0.0003 +0.0057 -0.0003 -0.0005
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0021 0.0011 +0.0047 +0.0032 +0.0041 -0.0011
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0017 0.0012 +0.0030 +0.0015 +0.0032 +0.0025 -0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0002 0.0003 +0.0019 +0.0020 +0.0021 +0.0019 +0.0001
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0008 0.0021 +0.0002 +0.0024 +0.0036 +0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0005 0.0008 +0.0033 +0.0027 +0.0018 +0.0003
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0007 -0.0004 +0.0014 +0.0011 +0.0004 +0.0009 +0.0003
Seer_Astral_45_Entrapment -0.0011 -0.0001
Seer_Astral_single_Entrapment -0.0022 0.0015 0.0018 +0.0040 +0.0004
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0013

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0005
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0008 0.0012 +0.0024 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0013 -0.0015 +0.0001 -0.0002
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0022 -0.0023 -0.0022 -0.0021 -0.0026 -0.0025 -0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0018 -0.0017 -0.0009 -0.0004 +0.0003 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0027 -0.0026 +0.0011 +0.0008 +0.0004 +0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 0.0009 0.0002 +0.0039 +0.0023 +0.0026 +0.0015 -0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0030 -0.0014 +0.0024 +0.0021 +0.0000 +0.0002 +0.0016
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0019 -0.0020 +0.0003 +0.0007 +0.0017 -0.0001
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0009 -0.0001 +0.0003 +0.0008
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0019
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0016 +0.0011 -0.0022 +0.0001 +0.0000 +0.0003
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0000 -0.0014 +0.0023 +0.0009 +0.0019 -0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0029 -0.0047 +0.0001 +0.0008 +0.0010 -0.0004 -0.0019
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0031 -0.0028 +0.0016 +0.0005 +0.0013 +0.0003 +0.0003
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0023 -0.0013 +0.0012 +0.0022 +0.0027 +0.0027 +0.0010
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0047 -0.0043 +0.0004 -0.0012 -0.0001 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0035 -0.0028 +0.0004 -0.0015 -0.0014 -0.0003 +0.0007
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0028 -0.0031 -0.0009 +0.0015 +0.0007 +0.0002 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0034 -0.0025 +0.0014 -0.0006 +0.0013 +0.0004 +0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0009 0.0009 +0.0048 +0.0051 +0.0029 +0.0040 +0.0000
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0031 -0.0036 -0.0023 -0.0004 -0.0033 -0.0035 -0.0004
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 -0.0004 0.0013 +0.0073 +0.0095 +0.0060 +0.0013 +0.0017
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0026 0.0024 +0.0124 +0.0092 +0.0079 +0.0071 -0.0002
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0007 0.0000 +0.0040 +0.0036 +0.0008 +0.0028 -0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0015 -0.0025 -0.0006 -0.0026 +0.0018 +0.0020 -0.0010
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 -0.0018 0.0025 +0.0057 -0.0041 -0.0003 +0.0022 +0.0043
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0006 0.0010 +0.0030 +0.0032 +0.0001 +0.0038 +0.0004
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0021 -0.0026 -0.0002 -0.0008 -0.0004 +0.0002 -0.0005
Seer_Astral_45_Entrapment -0.0029 -0.0007
Seer_Astral_single_Entrapment -0.0074 0.0027 0.0023 +0.0098 -0.0004
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0015

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 9868 11646 -12749 +1778

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -19 122 -649 +141

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0105 -0.0211 +0.0105

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 1584 856 +12 -728

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 5 9 -181 +4

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0.0032 0.0105 -0.2146 +0.0074

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 14 14 +4 +1 +1 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 11 +4 +0 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 13 +3 +0 +1 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 3 2 +0 +1 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 3 3 +0 +1 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1663 0.1663 +0.0204 +0.0242 +0.0263 +0.0289 +0.0000
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1579 0.1581 +0.0188 +0.0219 +0.0230 +0.0257 +0.0002
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1613 0.1611 +0.0155 +0.0186 +0.0203 -0.0003
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1494 0.1494 -0.0037 +0.0085 +0.0118 +0.0138 -0.0000
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1723 0.1734 +0.0036 +0.0095 +0.0118 +0.0135 +0.0011
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1494 0.1496 -0.0007 +0.0130 +0.0159 +0.0173 +0.0002
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1083
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1534 0.1536 +0.0056 +0.0037 +0.0040 +0.0031 +0.0002
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1565
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5772 0.5771 -0.0098 -0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1796 0.1793 +0.0076 -0.0003

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0843 0.0847 +0.0084 +0.0108 +0.0120 +0.0127 +0.0004
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0807 0.0808 +0.0085 +0.0106 +0.0109 +0.0120 +0.0001
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0736 0.0733 +0.0061 +0.0073 +0.0075 -0.0003
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0641 0.0643 -0.0135 +0.0040 +0.0050 +0.0054 +0.0002
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0787 0.0783 -0.0009 +0.0027 +0.0030 +0.0011 -0.0004
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0630 0.0637 -0.0133 +0.0070 +0.0069 +0.0069 +0.0007
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0473
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0995 0.0996 -0.0032 -0.0023 -0.0040 -0.0031 +0.0001
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1028
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5757 0.5760 -0.0121 +0.0003
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1315 0.1315 +0.0082 -0.0001

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0034 -0.0041 -0.0020 +0.0070 +0.0012 -0.0742 +0.0006
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0153 -0.0152 -0.0076 +0.0055 -0.0002 -0.0256 -0.0001
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0063 -0.0068 +0.0007 -0.0023 -0.0001 +0.0054 +0.0006
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0728 -0.0717 +0.0012 -0.0008 +0.0020 -0.0541 -0.0010
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0713 -0.0711 -0.0054 -0.0006 -0.0003 -0.0009 -0.0002
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0565 -0.0561 -0.0080 +0.0050 -0.0016 +0.0274 -0.0004
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0515 +0.0114 +0.0329 -0.0052 -0.0446
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1772 +0.0115 +0.0151 +0.0011 -0.0519
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1818 -0.0082 +0.0282 -0.0195 +0.1620
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0365 +0.0067 +0.0305 +0.0014 -0.0057
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3249 +0.0081 +0.0093 -0.0002 -0.0181
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1254 -0.0024 -0.0402 -0.0016 +0.0919
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1273 +0.0108 -0.0145 +0.0012 +0.0542
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2176 +0.0015 +0.0038 -0.0038 -0.0102
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2385 +0.0262 -0.0191 +0.0011 +0.0362
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1260 0.1319 -0.0059 -0.0059 +0.0211 -0.1105 +0.0059
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0842 -0.0838 +0.0062 +0.0047 -0.0191 +0.0237 -0.0003
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.1923 0.1901 +0.0183 -0.0240 +0.0287 -0.0863 -0.0021
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1030 0.1036 +0.0048 -0.0054 -0.0067 +0.0147 +0.0006
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0480 +0.0009 +0.0001 -0.0089 +0.0026 -0.0002
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2149 0.2149 +0.0051 -0.0017 +0.0004 +0.0113 -0.0000
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1432 0.1437 -0.0032 -0.0062 -0.0160 +0.1207 +0.0006
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0801 -0.0800 +0.0043 -0.0045 -0.0054 -0.0219 -0.0001
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0325 0.0340 +0.0169 -0.0238 +0.0355 -0.0639 +0.0015
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0386 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0045 -0.0031 +0.0125 +0.0006 -0.0636
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0320 -0.0051 -0.0071 +0.0012 +0.0284
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0764 +0.0119 -0.0026 -0.0002 +0.0339
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0863 -0.0238 +0.0049 +0.0003 +0.0244
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0151 -0.0331 +0.0073 +0.0004 -0.0079
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0632 +0.0109 -0.0100 -0.0011 +0.0548
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1523 -0.0356 -0.0145 +0.0024 +0.0936
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1009 -0.0468 -0.0064 -0.0010 +0.0640

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0005 -0.0016 +0.0009 +0.0076 -0.0005 -0.0728 +0.0011
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0138 -0.0143 -0.0089 +0.0045 +0.0004 -0.0274 +0.0006
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0062 0.0062 +0.0054 -0.0044 +0.0010 +0.0026 +0.0000
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0747 -0.0777 +0.0013 +0.0005 -0.0055 -0.0459 +0.0030
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0688 -0.0681 -0.0060 -0.0005 -0.0005 -0.0013 -0.0008
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0500 -0.0497 -0.0084 +0.0078 -0.0007 +0.0190 -0.0003
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0557 +0.0142 +0.0365 -0.0057 -0.0346
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1329 +0.0050 +0.0043 -0.0072 -0.0306
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1907 -0.0338 -0.0246 +0.0154 +0.1735
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0284 +0.0064 +0.0290 +0.0021 -0.0240
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.2977 +0.0072 +0.0066 -0.0010 -0.0079
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1151 +0.0002 -0.0402 -0.0012 +0.0863
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1119 +0.0124 -0.0135 -0.0021 +0.0609
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1899 -0.0003 +0.0009 -0.0042 -0.0059
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2077 +0.0289 -0.0188 +0.0012 +0.0274
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1508 0.1470 -0.0077 -0.0028 +0.0144 -0.0703 -0.0038
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0821 -0.0801 +0.0048 +0.0016 -0.0170 +0.0264 -0.0020
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2468 0.2419 +0.0504 -0.0481 +0.0073 -0.0186 -0.0049
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.1007 0.1005 +0.0031 -0.0032 -0.0081 +0.0248 -0.0002
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0442 -0.0439 +0.0011 -0.0008 -0.0084 +0.0021 -0.0003
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2240 0.2242 +0.0036 -0.0008 +0.0016 +0.0207 +0.0002
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1305 0.1314 +0.0005 -0.0096 -0.0297 +0.1259 +0.0010
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0799 -0.0803 +0.0056 -0.0034 -0.0033 -0.0285 +0.0003
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0545 0.0516 +0.0405 -0.0089 +0.0322 -0.0627 -0.0029
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0479 +0.0258 +0.0029 -0.0003 -0.0221
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0203 -0.0049 +0.0142 +0.0054 -0.0474
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0303 -0.0001 -0.0108 +0.0000 +0.0262
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0808 +0.0137 -0.0048 +0.0001 +0.0401
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0970 -0.0232 +0.0027 +0.0012 +0.0345
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0168 -0.0350 +0.0076 +0.0002 -0.0049
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0588 +0.0131 -0.0109 +0.0003 +0.0472
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1549 -0.0435 -0.0160 +0.0023 +0.0970
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0919 -0.0508 -0.0078 +0.0009 +0.0476

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1256 0.1258 +0.0343 +0.0202 -0.0086 -0.1822 +0.0002
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1137 0.1137 +0.0169 -0.0058 +0.0004 -0.0962 +0.0000
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1154 0.1162 +0.0117 -0.0078 +0.0011 -0.1454 +0.0008
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1328 0.1345 +0.0441 -0.0007 -0.0136 -0.1652 +0.0017
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1262 0.1266 +0.0164 -0.0031 -0.0002 -0.0931 +0.0003
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1323 0.1328 +0.0170 -0.0063 +0.0017 -0.1357 +0.0006
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1579 +0.0354 +0.0384 -0.0420 -0.4177
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2107 +0.0422 -0.0321 -0.0167 -0.1394
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3147 +0.2175 -0.0279 -0.1166 -0.9264
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1381 +0.0427 +0.0074 -0.0036 -0.1184
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2262 +0.0473 +0.0030 -0.0078 -0.1094
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1729 +0.0549 +0.0262 -0.0056 -0.2072
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1318 +0.0358 +0.0129 -0.0110 -0.1997
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1893 +0.0274 +0.0045 -0.0018 -0.0961
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1820 +0.0778 +0.0001 -0.0169 -0.3564
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1923 0.1948 +0.0445 +0.0761 -0.1281 -0.3785 +0.0025
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0459 0.0471 -0.0103 +0.0134 -0.0147 -0.1053 +0.0012
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2506 0.2533 -0.0030 +0.1483 +0.0078 -0.7069 +0.0027
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1841 0.1858 +0.0037 +0.0045 +0.0051 -0.1663 +0.0017
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0416 0.0415 +0.0676 -0.0087 -0.0168 -0.1101 -0.0001
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1798 0.1807 +0.0316 +0.0062 -0.0049 -0.1555 +0.0009
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.1948 0.1965 -0.0093 +0.0378 -0.0706 -0.3820 +0.0017
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0547 0.0552 +0.0977 -0.0155 +0.0159 -0.1932 +0.0005
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3890 0.4217 +0.0737 +0.1982 -0.0827 -0.8861 +0.0327
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1080 +0.0321 -0.0450 -0.0051 -0.3747
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1311 +0.0200 -0.0293 -0.0344 -0.4107
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0742 +0.0068 -0.0387 -0.0080 -0.0325
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0908 +0.0190 -0.0584 -0.0028 -0.0612
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0980 +0.0281 -0.0478 -0.0031 -0.0963
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0889 +0.0273 -0.0601 -0.0037 -0.0451
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0906 +0.0130 -0.0614 -0.0008 -0.0944
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1531 +0.0619 -0.0455 -0.0143 -0.4209
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1126 +0.0688 -0.0494 -0.0103 -0.3845

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0533 0.0545 +0.0149 -0.0182 -0.0054 -0.0675 +0.0012
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0349 0.0353 +0.0035 +0.0005 +0.0043 -0.0466 +0.0004
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0475 0.0482 -0.0157 -0.0104 +0.0083 -0.0648 +0.0008
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0439 0.0421 -0.0042 +0.0002 -0.0084 -0.0757 -0.0018
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0384 0.0382 +0.0032 -0.0030 +0.0035 -0.0332 -0.0003
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0527 0.0543 +0.0000 +0.0073 -0.0081 -0.0727 +0.0016
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0554 +0.0402 -0.0136 +0.0467 -0.2102
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0717 +0.0316 -0.0208 -0.0112 -0.0369
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1791 +0.1306 -0.0136 -0.0647 -0.2137
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0226 +0.0032 +0.0034 -0.0021 -0.0239
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0463 +0.0110 -0.0047 +0.0013 -0.0162
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0231 +0.0055 -0.0000 +0.0038 -0.0390
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0266 +0.0026 +0.0079 -0.0036 -0.0366
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0425 +0.0015 +0.0006 +0.0010 -0.0088
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0366 +0.0296 -0.0022 -0.0025 -0.0841
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0467 0.0470 +0.0146 +0.0452 -0.0355 -0.1810 +0.0003
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0176 0.0207 -0.0057 -0.0062 -0.0031 -0.0310 +0.0031
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0679 0.0684 -0.1294 +0.1626 +0.0090 -0.4326 +0.0004
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0358 0.0359 -0.0046 +0.0074 +0.0016 -0.0333 +0.0001
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0096 0.0107 +0.0109 -0.0066 +0.0090 -0.0337 +0.0010
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0360 0.0365 -0.0053 +0.0093 +0.0025 -0.0463 +0.0004
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0714 0.0661 -0.0166 +0.0170 -0.0166 -0.1460 -0.0053
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0194 0.0191 +0.0068 -0.0006 -0.0039 -0.0544 -0.0003
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.0896 0.0873 -0.0891 -0.0032 -0.0082 -0.3408 -0.0023
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0431 +0.0682 -0.0593 -0.0056 -0.1792
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0610 +0.0668 -0.0849 -0.0031 -0.1826
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0318 +0.0113 -0.0357 +0.0198 -0.0210
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0265 -0.0054 -0.0154 +0.0040 -0.0222
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0263 -0.0011 -0.0225 +0.0112 -0.0345
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0235 +0.0094 -0.0181 -0.0013 -0.0222
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0364 -0.0134 -0.0199 -0.0090 -0.0311
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0517 +0.0271 -0.0671 +0.0055 -0.2076
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0447 +0.0501 -0.0498 +0.0220 -0.2308

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 149.2600
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 11.7200 12.5400 -11.5300 -4.7800 -7.3300 -4.5900 +0.8200 -47.9020% -27.5982% -36.8898% -26.7951% +6.9966%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 9.6600 9.6700 -3.0800 +0.6000 +1.3100 +0.3800 +0.0100 -24.1569% +6.6152% +15.6699% +4.0904% +0.1035%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 11.2000 10.5800 -1.7300 +1.6200 +0.9200 -0.2300 -0.6200 -14.0536% +18.0804% +9.5238% -2.1277% -5.5357%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.8300 4.7800 +0.5500 +0.3700 -0.1600 -0.0500 +13.0024% +8.3900% -3.2389% -1.0352%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4400 6.2100 +0.8300 +1.8300 +1.4600 +1.6700 +0.7700 +15.4275% +41.7808% +30.7368% +36.7841% +14.1544%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.7400 5.3000 -0.1300 +1.1600 +0.8600 +0.6400 +0.5600 -2.3941% +28.0193% +19.3694% +13.7339% +11.8143%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9800 5.6600 +0.1100 +1.2400 +1.1300 +1.2000 +0.6800 +1.9820% +28.0543% +24.9448% +26.9058% +13.6546%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 63.8500
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 15.7600 13.3200 -14.3400 -6.4400 -5 -5.9600 -2.4400 -51.8438% -32.5911% -27.2926% -30.9129% -15.4822%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 12.9500
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.6100 5.8400 +0.0500 +1.2500 +1.1900 +1.7500 +1.2300 +0.8636% +27.2331% +25.5914% +42.7873% +26.6811%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.3100 6.1000 -0.1600 +1.7000 +0.2200 +0.7900 -2.5559% +38.6364% +3.7415% +14.8776%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.8200 5.4600 +0.9400 +1.7300 +0.6600 +1.8200 +0.6400 +20.7965% +46.3807% +13.7500% +50.0000% +13.2780%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.8800 4.1500 -1.5900 +0.6400 +0.2300 +0.7100 -0.7300 -27.7003% +18.2336% +5.8673% +20.6395% -14.9590%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 7.3400 6.0100 -1.0600 +0.4800 +0.5000 +0.2700 -1.3300 -14.9929% +8.6799% +9.0744% +4.7038% -18.1199%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 6.8000 6.2200 -1.3700 +0.4900 +0.0800 +0.6800 -0.5800 -18.0501% +8.5515% +1.3029% +12.2744% -8.5294%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 6.1200 5.5200 -0.9300 +0.8500 +1.2200 +1.1100 -0.6000 -14.4186% +18.2013% +28.3721% +25.1701% -9.8039%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.7300 5.2400 -2.1400 +0.3100 +0.6100 -0.3800 -0.4900 -28.9973% +6.2880% +13.1749% -6.7616% -8.5515%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.3300 4.2100 -0.5300 +0.5500 +0.8200 -0.1200 -11.1814% +15.0273% +24.1888% -2.7714%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 5.2200 4.6300 -0.6300 +0.7900 +0.8700 -0.5900 -11.9772% +20.5729% +23.1383% -11.3027%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.9900 5.0300 +0.3800 +1.6000 +1.3200 +1.5800 +1.0400 +8.1720% +46.6472% +35.5795% +45.7971% +26.0652%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.4700 4.3100 +0.1400 +1.0200 +0.6200 +1.0400 -0.1600 +3.3573% +31.0030% +16.8022% +31.8043% -3.5794%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.7100 5.3300 +0.0500 +1.8000 +1.7300 +1.8400 +0.6200 +0.9470% +50.9915% +48.0556% +52.7221% +13.1635%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 5.3900 5.1800 -0.3300 +1.3600 +1.0300 +0.3700 -0.2100 -5.9891% +35.6021% +24.8193% +7.6923% -3.8961%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.6000 4.4500 -0.2800 +0.9900 +0.8800 -0.1500 -5.9197% +28.6127% +24.6499% -3.2609%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 5.2500 5.2400 +0.5900 +1.6200 +1.5100 +1.4600 -0.0100 +12.6882% +44.7514% +40.4826% +38.6243% -0.1905%
SCP_Astral_MBR 9.0400 6.5500 6.1000 8.7400 8.1000 -0.9400 +1.5500 +2 -0.6400 -10.3982% +23.6641% +32.7869% -7.3227%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 68.4000
Seer_Astral_single 4.4700 4.1400 5.5800 6.7700 4.5000 +0.0300 +0.3600 -1.0800 -2.2700 +0.6711% +8.6957% -19.3548% -33.5303%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 145.3200
EWZ_2P_MBR_Exploris 26.1800 21.8800 21.0900 -5.0900 -0.7900 -19.4423% -3.6106%
EWZ_2P_MBR_Exploris_Human 12.9100 13.2500 12.2900 -0.6200 -0.9600 -4.8025% -7.2453%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 16.3300 11.6800 -0.3800 -4.6500 -3.1509% -28.4752%
MacCoss_Eclipse_Normalization_noNorm 27.5100 35.7700 31.0800 +3.5700 -4.6900 +12.9771% -13.1115%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 36.9000 36.0400 +8.3700 -0.8600 +30.2494% -2.3306%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5117_DIA_H292_Rep1_EWZ_ES.png
MA5117_DIA_H292_Rep1_EWZ_ES.png
MA5118_DIA_H292_Rep2_EWZ_ES.png
MA5118_DIA_H292_Rep2_EWZ_ES.png
MA5119_DIA_H292_Rep3_EWZ_ES.png
MA5119_DIA_H292_Rep3_EWZ_ES.png
MA5120_DIA_H292_KEAP1KO_Rep1_EWZ_ES.png
MA5120_DIA_H292_KEAP1KO_Rep1_EWZ_ES.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png