Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6253241 6229043 +729707 -1544469 -1508714 +136 -24198 +13.2690% -19.8684% -19.4981% +0.0022% -0.3870%
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1293541 +197047 -13464 -18414 +0 +0 +17.9706% -1.0301% -1.4036% +0% +0%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 599881 +13559 -15881 -10829 +0 +0 +2.3126% -2.5791% -1.7732% +0% +0%
MTAC_3P_Standard 596590 623022 617574 607435 607435 607435 +10845 -15587 -10139 +0 +0 +1.8178% -2.5018% -1.6417% +0% +0%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 135560 -1988 -1279 +0 +0 -1.4453% -0.9347% +0% +0%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 155401 155066 -575 -1485 -1443 +31 -335 -0.3694% -0.9486% -0.9220% +0.0200% -0.2156%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 137977 -532 -1408 -1315 +92 +190 -0.3841% -1.0102% -0.9441% +0.0667% +0.1379%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 157922 -1040 -810 -1238 +0 +0 -0.6542% -0.5103% -0.7778% +0% +0%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638372 3638373 +356290 -122459 -75762 +1 +1 +10.8556% -3.2562% -2.0398% +0.0000% +0.0000%
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1184084 +161348 +29415 +60211 +0 +0 +15.7761% +2.5475% +5.3575% +0% +0%
SCIEX_3P 672242 749525 722698 714454 714454 714454 +42212 -35071 -8244 +0 +0 +6.2793% -4.6791% -1.1407% +0% +0%
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 42100 +1218 +400 -325 +0 +0 +2.9793% +0.9592% -0.7661% +0% +0%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 41152 +83 -1250 -871 +0 +0 +0.2021% -2.9480% -2.0727% +0% +0%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 22913 +14173 -202 -102 +0 +0 +162.1625% -0.8739% -0.4432% +0% +0%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 18348 +1413 +795 -61 +0 +0 +8.3437% +4.5291% -0.3314% +0% +0%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 98648 -1260 -4243 -335 +0 +0 -1.2612% -4.1238% -0.3384% +0% +0%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 71126 +28 -1602 -319 +0 +0 +0.0394% -2.2027% -0.4465% +0% +0%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113392 113250 -1907 -4066 -1072 +169 -142 -1.6560% -3.4659% -0.9377% +0.1495% -0.1252%
SCP_Astral_10ng_ms 105704 106497 105622 104434 104512 104512 -1192 -1985 -1110 +78 +0 -1.1277% -1.8639% -1.0509% +0.0747% +0%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 11233 +1039 +427 -5 +0 +0 +10.1923% +3.9515% -0.0445% +0% +0%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 15699 +892 +266 -342 +0 +0 +6.0242% +1.7236% -2.1320% +0% +0%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 2386 +1125 +354 -64 +0 +0 +89.2149% +17.4213% -2.6122% +0% +0%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 5731 +4295 +948 +41 +0 +0 +299.0947% +19.8202% +0.7206% +0% +0%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 22463 +753 +568 -117 +0 +0 +3.4684% +2.5942% -0.5182% +0% +0%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 25625 -235 -518 -635 +0 +0 -0.9087% -1.9814% -2.4181% +0% +0%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 6834 +3350 -64 +0 +0 +96.1538% -0.9278% +0% +0%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 12889 +2190 +1415 +7 +0 +0 +20.4692% +12.3322% +0.0543% +0% +0%
SCP_Astral_MBR 92167 93585 91884 90864 90838 90838 -1329 -2747 -1046 -26 +0 -1.4419% -2.9353% -1.1384% -0.0286% +0%
Seer_Astral_45 2512737 3124006 3135497 2971207 2970421 2971207 +458470 -152799 -164290 +0 +786 +18.2458% -4.8911% -5.2397% +0% +0.0265%
Seer_Astral_single 56699 55793 55891 55891 55891 -808 +98 +0 +0 -1.4251% +0.1756% +0% +0%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17648311 17622293 +1534019 -2771494 -1577497 +8847 -26018 +9.5350% -13.5899% -8.2162% +0.0502% -0.1474%
EWZ_2P_MBR_Exploris 1662994 1805470 1794012 1775346
EWZ_2P_MBR_Exploris 1776128 1775346 -782 -0.0440%
EWZ_2P_MBR_Exploris_Human 836809 836433 -376 -0.0449%
EWZ_2P_MBR_Exploris_YeastHuman 914924 914065 -859 -0.0939%
EWZ_2P_noMBR_Exploris 1608906 1770319 1769221 1775346
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 +2 +0.0001%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 +2 +0.0001%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 355853 348800 +102632 -81974 -48413 -133 -7053 +41.6919% -19.0295% -12.1882% -0.0381% -1.9820%
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 132031 +20527 -1588 +672 +0 +0 +18.4092% -1.1885% +0.5116% +0% +0%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 114816 +6549 -2536 +157 +0 +0 +6.0489% -2.1610% +0.1369% +0% +0%
MTAC_3P_Standard 110265 118693 115800 116148 116148 116148 +5883 -2545 +348 +0 +0 +5.3353% -2.1442% +0.3005% +0% +0%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 48995 +137 -37 +0 +0 +0.2804% -0.0755% +0% +0%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 56132 55857 +1888 +782 +17 -27 -275 +3.4983% +1.4199% +0.0304% -0.0483% -0.4899%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 50554 +1933 +889 +265 +94 +139 +3.9756% +1.7900% +0.5270% +0.1863% +0.2757%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 56827 +1767 +908 +120 +0 +0 +3.2092% +1.6238% +0.2116% +0% +0%
Olsen_Astral_3P 198770 231103 234505 234149 234149 234149 +35379 +3046 -356 +0 +0 +17.7990% +1.3180% -0.1518% +0% +0%
Olsen_Exploris_3P 51272 58784 55047 58593 58593 58565 +7293 -219 +3518 -28 -28 +14.2241% -0.3726% +6.3909% -0.0478% -0.0478%
SCIEX_3P 82206 93920 87927 87858 87858 87858 +5652 -6062 -69 +0 +0 +6.8754% -6.4544% -0.0785% +0% +0%
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 15707 +1267 +749 +458 +0 +0 +8.7742% +5.0074% +3.0035% +0% +0%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15070 15072 +589 +7 +156 +2 +2 +4.0668% +0.0465% +1.0459% +0.0133% +0.0133%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9364 9385 +645 +9 -4 +21 +21 +7.3799% +0.0960% -0.0426% +0.2243% +0.2243%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 9810 +912 +551 +26 +0 +0 +10.2495% +5.9510% +0.2657% +0% +0%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 34425 -440 -1872 +83 +0 +0 -1.2620% -5.1575% +0.2417% +0% +0%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 25223 +574 -243 +104 +0 +0 +2.3287% -0.9542% +0.4140% +0% +0%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 40026 39946 -210 -1599 -97 +53 -80 -0.5230% -3.8488% -0.2422% +0.1329% -0.1999%
SCP_Astral_10ng_ms 36688 37676 37649 37421 37457 37459 +771 -217 -190 +38 +2 +2.1015% -0.5760% -0.5047% +0.1015% +0.0053%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 4246 +580 +297 +37 +0 +0 +15.8211% +7.5209% +0.8791% +0% +0%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6066 6067 +768 +456 +212 +1 +1 +14.4933% +8.1269% +3.6208% +0.0165% +0.0165%
SCP_Astral_250pg_3ms 675 721 908 879 879 879 +204 +158 -29 +0 +0 +30.2222% +21.9140% -3.1938% +0% +0%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2163 2165 +729 +427 +20 +2 +2 +50.7660% +24.5685% +0.9324% +0.0925% +0.0925%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8406 8408 +614 +436 +156 +2 +2 +7.8779% +5.4691% +1.8905% +0.0238% +0.0238%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9414 9415 +257 +73 +44 +1 +1 +2.8063% +0.7814% +0.4695% +0.0106% +0.0106%
SCP_Astral_500pg_3ms 1846 2600 2586 2586 2589 +743 -11 +3 +3 +40.2492% -0.4231% +0.1160% +0.1160%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4805 4804 +930 +649 +30 -1 -1 +24.0062% +15.6197% +0.6284% -0.0208% -0.0208%
SCP_Astral_MBR 24110 24991 24570 24544 24526 24527 +417 -464 -43 -17 +1 +1.7296% -1.8567% -0.1750% -0.0693% +0.0041%
Seer_Astral_45 69584 90103 87204 87620 87511 87624 +18040 -2479 +420 +4 +113 +25.9255% -2.7513% +0.4816% +0.0046% +0.1291%
Seer_Astral_single 56699 55793 55891 55891 55891 -808 +98 +0 +0 -1.4251% +0.1756% +0% +0%
YEAST_KO_Astral 66823 87888 87428 86498 86437 86577 +19754 -1311 -851 +79 +140 +29.5617% -1.4917% -0.9734% +0.0913% +0.1620%
EWZ_2P_MBR_Exploris 50700 56145 54665 55147
EWZ_2P_MBR_Exploris 55271 55147 -124 -0.2243%
EWZ_2P_MBR_Exploris_Human 48465 48411 -54 -0.1114%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51162 -84 -0.1639%
EWZ_2P_noMBR_Exploris 50591 56328 55060 55147
MacCoss_Eclipse_Normalization_noNorm 73278 73277 -1 -0.0014%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 -1 -0.0014%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 648553 647938 +44660 -77003 -82626 +10473 -615 +7.4029% -10.6220% -11.3099% +1.6429% -0.0948%
KEAP1KO_Eclipse 87920 92888 93982 93441 93441 94284 +6364 +1396 +302 +843 +843 +7.2384% +1.5029% +0.3213% +0.9022% +0.9022%
MTAC_3P_Alternating 63773 63974 63611 63015 63015 65848 +2075 +1874 +2237 +2833 +2833 +3.2537% +2.9293% +3.5167% +4.4958% +4.4958%
MTAC_3P_Standard 64317 64464 64219 63385 63385 66099 +1782 +1635 +1880 +2714 +2714 +2.7707% +2.5363% +2.9275% +4.2818% +4.2818%
MTAC_Yeast_Alternating_3min 12067 11970 11940 11940 12284 +217 +314 +344 +344 +1.7983% +2.6232% +2.8811% +2.8811%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12335 12668 +236 +197 +306 +340 +333 +1.8983% +1.5797% +2.4753% +2.7579% +2.6996%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 11933 12244 +236 +197 +284 +276 +311 +1.9654% +1.6353% +2.3746% +2.3061% +2.6062%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12410 12782 +221 +317 +305 +372 +372 +1.7594% +2.5431% +2.4445% +2.9976% +2.9976%
Olsen_Astral_3P 236395 245756 242430 240719 240719 247710 +11315 +1954 +5280 +6991 +6991 +4.7865% +0.7951% +2.1779% +2.9042% +2.9042%
Olsen_Exploris_3P 146224 153534 153990 155827 155827 157202 +10978 +3668 +3212 +1375 +1375 +7.5077% +2.3890% +2.0858% +0.8824% +0.8824%
SCIEX_3P 70810 74366 72157 71550 71550 73345 +2535 -1021 +1188 +1795 +1795 +3.5800% -1.3729% +1.6464% +2.5087% +2.5087%
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 9334 10012 +849 +484 +427 +678 +678 +9.2655% +5.0798% +4.4549% +7.2638% +7.2638%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9553 9985 +687 +224 +573 +432 +432 +7.3887% +2.2948% +6.0880% +4.5221% +4.5221%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6116 6309 +3859 +225 +62 +193 +193 +157.5102% +3.6982% +0.9925% +3.1557% +3.1557%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4923 4970 +267 +382 +12 +47 +47 +5.6772% +8.3261% +0.2420% +0.9547% +0.9547%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16055 16511 +321 +231 +486 +456 +456 +1.9827% +1.4189% +3.0328% +2.8402% +2.8402%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13671 14030 +431 +189 +342 +359 +359 +3.1694% +1.3655% +2.4985% +2.6260% +2.6260%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 16777 17406 +389 +228 +493 +661 +629 +2.2859% +1.3273% +2.9149% +3.9474% +3.7492%
SCP_Astral_10ng_ms 16252 16276 16117 15925 15961 16433 +181 +157 +316 +508 +472 +1.1137% +0.9646% +1.9607% +3.1900% +2.9572%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3539 3805 +158 -108 -59 +266 +266 +4.3323% -2.7600% -1.5269% +7.5162% +7.5162%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 4977 5189 +889 +586 +392 +212 +212 +20.6744% +12.7308% +8.1718% +4.2596% +4.2596%
SCP_Astral_250pg_3ms 576 22 936 741 741 737 +161 +715 -199 -4 -4 +27.9514% +3250% -21.2607% -0.5398% -0.5398%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2046 2068 +1431 -12 +39 +22 +22 +224.6468% -0.5769% +1.9221% +1.0753% +1.0753%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6127 6228 -17 -118 +212 +101 +101 -0.2722% -1.8594% +3.5239% +1.6484% +1.6484%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7023 7354 +632 +625 +342 +331 +331 +9.4020% +9.2882% +4.8774% +4.7131% +4.7131%
SCP_Astral_500pg_3ms 982 2365 2177 2177 2229 +1247 -136 +52 +52 +126.9857% -5.7505% +2.3886% +2.3886%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 3918 4084 +376 +77 +39 +166 +166 +10.1402% +1.9216% +0.9642% +4.2369% +4.2369%
SCP_Astral_MBR 20165 20129 20074 19793 19851 19887 -278 -242 -187 +94 +36 -1.3786% -1.2022% -0.9316% +0.4749% +0.1814%
Seer_Astral_45 225377 241455 241952 237727 237529 242783 +17406 +1328 +831 +5056 +5254 +7.7231% +0.5500% +0.3435% +2.1268% +2.2119%
Seer_Astral_single 4685 4700 4632 4632 4732 +47 +32 +100 +100 +1.0032% +0.6809% +2.1589% +2.1589%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1306693 1340674 +39838 -47589 +13210 +38974 +33981 +3.0625% -3.4280% +0.9951% +2.9941% +2.6005%
EWZ_2P_MBR_Exploris 239484 246184 245112 244993
EWZ_2P_MBR_Exploris 245259 246984 +1725 +0.7033%
EWZ_2P_MBR_Exploris_Human 115447 117193 +1746 +1.5124%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130686 +1718 +1.3321%
EWZ_2P_noMBR_Exploris 235990 244737 245013 244993
MacCoss_Eclipse_Normalization_noNorm 178174 184824 +6650 +3.7323%
MacCoss_Eclipse_Normalization_yesNorm 178174 184824 +6650 +3.7323%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26807 26372 +4632 -2168 -1155 -25 -435 +21.3063% -7.5964% -4.1959% -0.0947% -1.6227%
KEAP1KO_Eclipse 7845 8175 8155 8203 8203 8245 +400 +70 +90 +42 +42 +5.0988% +0.8563% +1.1036% +0.5120% +0.5120%
MTAC_3P_Alternating 11361 11494 11351 11338 11338 11790 +429 +296 +439 +452 +452 +3.7761% +2.5753% +3.8675% +3.9866% +3.9866%
MTAC_3P_Standard 11473 11560 11477 11396 11396 11871 +398 +311 +394 +475 +475 +3.4690% +2.6903% +3.4330% +4.1681% +4.1681%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4100 4206 +78 +114 +106 +106 +1.8895% +2.7859% +2.5854% +2.5854%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4218 4331 +116 +83 +113 +117 +113 +2.7521% +1.9539% +2.6790% +2.7765% +2.6790%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4083 4212 +137 +78 +122 +115 +129 +3.3620% +1.8868% +2.9829% +2.8069% +3.1594%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4231 4359 +110 +122 +115 +128 +128 +2.5888% +2.8794% +2.7097% +3.0253% +3.0253%
Olsen_Astral_3P 13820 14378 14293 14296 14296 14622 +802 +244 +329 +326 +326 +5.8032% +1.6970% +2.3018% +2.2804% +2.2804%
Olsen_Exploris_3P 7255 7582 7340 7479 7479 7531 +276 -51 +191 +52 +52 +3.8043% -0.6726% +2.6022% +0.6953% +0.6953%
SCIEX_3P 8652 9109 8679 8618 8618 8756 +104 -353 +77 +138 +138 +1.2020% -3.8753% +0.8872% +1.6013% +1.6013%
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3318 3551 +306 +162 +140 +233 +233 +9.4299% +4.7802% +4.1044% +7.0223% +7.0223%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3434 3490 +236 +57 +199 +56 +56 +7.2526% +1.6604% +6.0468% +1.6308% +1.6308%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2397 2411 -39 +15 -39 +14 +14 -1.5918% +0.6260% -1.5918% +0.5841% +0.5841%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2642 2595 +87 +159 -39 -47 -47 +3.4689% +6.5271% -1.4806% -1.7790% -1.7790%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5546 5636 +57 -20 +132 +90 +90 +1.0217% -0.3536% +2.3983% +1.6228% +1.6228%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4811 4856 +135 +18 +73 +45 +45 +2.8596% +0.3721% +1.5262% +0.9354% +0.9354%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5802 5989 +143 +40 +146 +184 +187 +2.4461% +0.6724% +2.4987% +3.1697% +3.2230%
SCP_Astral_10ng_ms 5611 5655 5596 5553 5572 5686 +75 +31 +90 +133 +114 +1.3367% +0.5482% +1.6083% +2.3951% +2.0459%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1288 1357 +65 -67 -49 +69 +69 +5.0310% -4.7051% -3.4851% +5.3571% +5.3571%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1873 1875 +307 +215 +117 +2 +2 +19.5791% +12.9518% +6.6553% +0.1068% +0.1068%
SCP_Astral_250pg_3ms 307 8 350 283 283 282 -25 +274 -68 -1 -1 -8.1433% +3425% -19.4286% -0.3534% -0.3534%
SCP_Astral_250pg_6ms 637 756 751 766 766 767 +130 +11 +16 +1 +1 +20.4082% +1.4550% +2.1305% +0.1305% +0.1305%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2230 2218 +11 -57 +49 -12 -12 +0.4984% -2.5055% +2.2591% -0.5381% -0.5381%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2539 2603 +200 +215 +126 +64 +64 +8.3229% +9.0034% +5.0868% +2.5207% +2.5207%
SCP_Astral_500pg_3ms 525 902 828 828 838 +313 -64 +10 +10 +59.6190% -7.0953% +1.2077% +1.2077%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1435 1464 +146 +17 -22 +29 +29 +11.0774% +1.1748% -1.4805% +2.0209% +2.0209%
SCP_Astral_MBR 4708 4720 4712 4715 4719 4707 -1 -13 -5 -8 -12 -0.0212% -0.2754% -0.1061% -0.1697% -0.2543%
Seer_Astral_45 5802 6297 6122 6133 6137 6243 +441 -54 +121 +110 +106 +7.6008% -0.8576% +1.9765% +1.7936% +1.7272%
Seer_Astral_single 4685 4700 4632 4632 4732 +47 +32 +100 +100 +1.0032% +0.6809% +2.1589% +2.1589%
YEAST_KO_Astral 4565 4795 4676 4673 4691 4778 +213 -17 +102 +105 +87 +4.6659% -0.3545% +2.1814% +2.2470% +1.8546%
EWZ_2P_MBR_Exploris 6831 7059 6953 7009
EWZ_2P_MBR_Exploris 7041 7081 +40 +0.5681%
EWZ_2P_MBR_Exploris_Human 6167 6253 +86 +1.3945%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6935 +48 +0.6970%
EWZ_2P_noMBR_Exploris 6858 7077 7019 7009
MacCoss_Eclipse_Normalization_noNorm 5804 6015 +211 +3.6354%
MacCoss_Eclipse_Normalization_yesNorm 5804 6015 +211 +3.6354%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0009 -0.0007 +0.0004 +0.0002
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0004 -0.0002 -0.0011 -0.0011 -0.0011 -0.0006 -0.0007 -0.0009 +0 +0
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0007 +0 +0
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0008 -0.0003 -0.0007 +0.0002 +0 +0
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0007 +0.0006 -0.0012 -0.0002 +0 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0026 -0.0011 -0.0007 +0 +0
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0015 -0.0011 -0.0002 -0.0001 +0 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0020 -0.0001 -0.0007 -0.0008 +0 +0
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0025 -0.0015 -0.0006 -0.0001 +0
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 +0
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015 -0.0015 +0.0000 -0.0007 -0.0002 +0 +0
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0005 +0.0006 +0.0002 +0.0016 +0 +0
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006 -0.0006 -0.0001 -0.0005 -0.0002 +0 +0
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0020 +0.0003 +0.0010 +0
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 -0.0046 +0.0008 -0.0013 -0.0015 +0 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 -0.0046 -0.0016 +0.0002 -0.0016 -0.0008 +0
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 -0.0026 -0.0024 -0.0015 +0.0010 +0 +0
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0024 -0.0002 -0.0007 +0 +0
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0013 +0.0007 -0.0022 +0.0002 +0 +0
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0018 +0.0007 +0.0009 +0.0001 +0 +0
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0012 -0.0004 -0.0013 +0.0010 +0 +0
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0052 -0.0013 -0.0012 -0.0055 +0 +0
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0031 -0.0029 -0.0019 -0.0007 +0 +0
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0 +0.0069 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0050 -0.0050 +0.0001 -0.0023 +0 +0
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0026 -0.0004 -0.0016 +0.0002 +0 +0
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 -0.0011 +0.0002 +0.0013 +0.0001 +0 +0
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 -0.0035 -0.0022 -0.0012 +0 +0
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 -0.0015 +0.0016 +0.0018 +0 +0
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0022 +0.0004 -0.0003 -0.0008 +0 +0
Seer_Astral_45_Entrapment -0.0023 -0.0023 -0.0023 +0 +0
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0022 +0 +0
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0025 -0.0025 -0.0001 -0.0006 +0.0001 +0 +0

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0021 -0.0029 -0.0005 -0.0009
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0011 -0.0008 -0.0026 -0.0026 -0.0023 -0.0013 -0.0012 -0.0015 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0029 -0.0017 +0.0013 +0.0013
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 0.0007 -0.0016 -0.0006 -0.0005 -0.0022 -0.0023 -0.0023
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0035 -0.0039 -0.0026 -0.0014 -0.0010 -0.0013 -0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0048 -0.0049 +0.0017 +0.0004 -0.0001 -0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0034 -0.0060 -0.0018 -0.0021 -0.0011 -0.0026 -0.0026
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0028 -0.0024 +0.0034 +0.0023 -0.0004 +0.0003 +0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0052 -0.0016 -0.0007 +0.0004 -0.0011
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0030 -0.0028
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0038 -0.0030 +0.0010 +0.0004 -0.0007 +0.0007 +0.0007
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0009 -0.0020 +0.0009 -0.0018 +0.0008 -0.0011 -0.0011
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0034 -0.0029 +0.0002 +0.0009 -0.0003 +0.0006 +0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0051 -0.0034 +0.0015 +0.0008 +0.0008 +0.0017
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0070 -0.0077 -0.0007 -0.0018 -0.0007 -0.0006 -0.0006
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0084 -0.0090 -0.0031 -0.0031 -0.0018 -0.0018 -0.0006
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0045 -0.0042 -0.0025 +0.0007 +0.0001 +0.0003 +0.0003
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0054 -0.0057 -0.0002 -0.0017 -0.0003 -0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0045 -0.0031 +0.0001 -0.0008 -0.0015 +0.0014 +0.0014
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0061 -0.0057 -0.0020 +0.0016 +0.0010 +0.0004 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0046 -0.0045 +0.0009 -0.0025 +0.0009 +0.0001 +0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0064 -0.0054 -0.0001 +0.0023 -0.0019 +0.0010 +0.0010
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0013 -0.0036 +0.0006 +0.0006 -0.0010 -0.0023 -0.0023
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0 +0.0028 +0 +0.0085 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 -0.0088 +0.0011 -0.0022 -0.0004 -0.0000 -0.0000
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0020 -0.0024 +0.0012 +0.0015 -0.0038 -0.0004 -0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0062 -0.0060 -0.0040 -0.0059 -0.0009 +0.0001 +0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0001 -0.0002 +0.0040 -0.0073 -0.0022 -0.0001 -0.0001
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0056 -0.0036 +0.0009 +0.0009 -0.0028 +0.0020 +0.0020
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0050 -0.0059 +0.0000 -0.0029 -0.0034 -0.0009 -0.0009
Seer_Astral_45_Entrapment -0.0049 -0.0049 -0.0043 +0.0006 +0.0006
Seer_Astral_single_Entrapment -0.0074 -0.0074 -0.0073 +0.0001 +0.0001
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0047 -0.0061 +0.0004 -0.0006 -0.0027 -0.0014 -0.0014

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0002 -0.0003 -0.0001 -0.0001
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0005 -0.0013 -0.0013 -0.0013 -0.0007 -0.0008 -0.0008 -0.0000 -0.0000
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0003 +0 +0
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0001 +0.0000 -0.0004 +0.0001 +0 +0
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0003 +0.0006 -0.0005 +0.0001 +0 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0014 -0.0004 -0.0001 +0 +0
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0008 -0.0004 -0.0001 +0.0001 +0 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0011 -0.0002 -0.0003 -0.0003 +0 +0
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 -0.0015 -0.0007 -0.0005 -0.0000 +0
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 -0.0000
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008 -0.0008 +0.0000 -0.0005 -0.0000 +0 +0
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 -0.0000 +0.0004 -0.0005 +0.0006 +0 +0
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004 -0.0004 +0.0001 -0.0002 -0.0002 -0.0000 -0.0000
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0019 -0.0004 +0.0011 +0
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 -0.0037 +0.0009 -0.0009 -0.0006 +0 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 -0.0034 -0.0014 -0.0005 -0.0008 -0.0008 +0
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 -0.0024 -0.0026 -0.0018 +0.0004 +0 +0
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0016 +0.0001 -0.0006 +0 +0
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0008 +0.0006 -0.0012 +0.0004 +0 +0
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0015 +0.0005 +0.0006 +0.0001 +0 +0
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0008 -0.0003 -0.0011 +0.0004 +0 +0
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 -0.0031 -0.0001 -0.0005 -0.0029 +0 +0
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0014 -0.0007 -0.0006 -0.0001 +0 +0
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0 +0.0060 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 -0.0030 +0.0007 -0.0009 +0 +0
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0013 +0.0005 -0.0010 +0.0007 +0 +0
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 -0.0017 -0.0001 +0.0001 +0.0001 +0 +0
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 -0.0016 -0.0034 -0.0012 +0 +0
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 -0.0010 +0.0015 +0.0009 +0 +0
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 -0.0013 +0.0005 +0.0002 -0.0005 +0 +0
Seer_Astral_45_Entrapment -0.0011 -0.0011 -0.0011 +0 +0
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0022 +0 +0
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0007 -0.0007 +0.0006 -0.0001 +0.0001 -0.0000 -0.0000

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0012 -0.0020 -0.0012 -0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0007 -0.0001 -0.0012 -0.0012 -0.0012 -0.0010 -0.0005 -0.0011 -0.0000 -0.0000
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0005 +0.0011 +0.0011
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 0.0002 -0.0006 -0.0005 -0.0004 -0.0009 -0.0009 -0.0009
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0021 -0.0020 -0.0012 -0.0007 +0.0000 -0.0002 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0030 -0.0025 +0.0011 +0.0008 +0.0004 +0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0013 -0.0031 +0.0006 -0.0010 -0.0006 -0.0018 -0.0018
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0018 +0.0020 +0.0017 -0.0004 -0.0002 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0021 -0.0036 -0.0013 -0.0009 +0.0001 -0.0016
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0020 -0.0016
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0024 -0.0011 +0.0013 +0.0010 +0.0007 +0.0013 +0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0016 -0.0019 +0.0007 -0.0025 -0.0002 -0.0003 -0.0003
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0028 -0.0018 +0.0017 +0.0014 +0.0003 +0.0009 +0.0009
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0032 -0.0036 +0.0001 -0.0013 -0.0004 -0.0004
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0043 -0.0064 -0.0016 -0.0009 -0.0007 -0.0021 -0.0021
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0039 -0.0052 -0.0008 -0.0019 -0.0011 -0.0021 -0.0013
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0040 -0.0033 -0.0008 +0.0002 +0.0007 +0.0007 +0.0007
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0042 -0.0043 +0.0004 -0.0012 -0.0001 -0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0025 -0.0026 +0.0006 -0.0013 -0.0012 -0.0001 -0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0033 -0.0039 -0.0018 +0.0007 -0.0001 -0.0007 -0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0031 +0.0007 -0.0012 +0.0007 -0.0002 -0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0030 -0.0042 -0.0003 -0.0001 -0.0022 -0.0011 -0.0011
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0001 -0.0005 +0.0008 +0.0026 -0.0002 -0.0005 -0.0005
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0 +0.0060 +0.0082 +0.0047 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0047 -0.0048 +0.0052 +0.0021 +0.0007 -0.0000 -0.0000
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0028 -0.0019 +0.0021 +0.0016 -0.0011 +0.0009 +0.0009
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0045 -0.0066 -0.0046 -0.0066 -0.0022 -0.0021 -0.0021
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0003 +0.0035 -0.0064 -0.0026 -0.0001 -0.0001
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0028 -0.0021 -0.0001 +0.0001 -0.0030 +0.0007 +0.0007
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0028 -0.0045 -0.0021 -0.0027 -0.0022 -0.0016 -0.0016
Seer_Astral_45_Entrapment -0.0029 -0.0029 -0.0011 +0.0018 +0.0018
Seer_Astral_single_Entrapment -0.0074 -0.0074 -0.0073 +0.0001 +0.0001
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0021 -0.0021 +0.0020 +0.0009 -0.0005 +0.0000 +0.0000

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24848 +453

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 825 +54

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0047 0.0115 0.0316 0 0.0332 +0.0201 +0.0285 +0.0217 +0.0016 +0.0332

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -895 -1739

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 30 -160

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.1485 0 0.2251 0 0 -0.0476 -0.1485 +0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 3 +1 +2 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 15 +4 +1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 14 +4 +0 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 1 +0 +1 -1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 1 +0 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 1 +0 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1374 0.1375 -0.0084 -0.0046 -0.0025 +0.0001 +0.0001
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1324 0.1325 -0.0068 -0.0037 -0.0026 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1408 0.1408 -0.0048 -0.0017 -0.0000 -0.0000
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1357 -0.0174 -0.0053 -0.0019 +0.0001 +0.0001
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1597 0.1597 -0.0100 -0.0042 -0.0018 -0.0002 +0.0001
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1323 -0.0180 -0.0043 -0.0014 +0.0001 +0.0001
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0832 0.0833 +0.0010 -0.0051 -0.0021 +0.0001 +0.0001
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1505 0.1506 +0.0026 +0.0007 +0.0011 +0.0001 +0.0001
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184 0.1184 -0.0099 -0.0097 -0.0011 +0.0001 +0.0001
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 +0.0000
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1717 +0.0001

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0720 0.0757 -0.0006 +0.0018 +0.0031 +0.0037 +0.0037
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0688 0.0718 -0.0005 +0.0016 +0.0019 +0.0030 +0.0030
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0658 0.0688 +0.0016 +0.0028 +0.0030 +0.0030
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0588 0.0602 -0.0176 -0.0001 +0.0009 +0.0014 +0.0014
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0762 0.0787 -0.0005 +0.0031 +0.0034 +0.0015 +0.0025
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0568 0.0585 -0.0185 +0.0018 +0.0016 +0.0017 +0.0017
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0363 0.0374 +0.0000 +0.0001 +0.0007 +0.0011 +0.0011
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1027 0.1032 +0.0004 +0.0013 -0.0004 +0.0005 +0.0005
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0785 0.0796 -0.0069 -0.0037 +0.0009 +0.0010 +0.0010
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5879 -0.0002
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1245 +0.0012

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 -0.0777 -0.0020 +0.0070 +0.0012 +0 +0.0000
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0409 -0.0407 -0.0076 +0.0055 -0.0002 +0 -0.0001
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0009 +0.0007 -0.0023 -0.0001 +0 -0.0000
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1269 -0.1266 +0.0012 -0.0008 +0.0020 +0 -0.0002
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0722 -0.0723 -0.0054 -0.0006 -0.0003 +0 +0.0001
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0291 -0.0289 -0.0080 +0.0050 -0.0016 +0 -0.0001
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0335 0.0333 -0.0024 -0.0402 -0.0016 +0 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0731 0.0729 +0.0108 -0.0145 +0.0012 +0 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 +0 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2023 0.2019 +0.0262 -0.0191 +0.0011 +0 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2365 0.2353 -0.0059 -0.0059 +0.0211 +0 -0.0012
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0605 -0.0604 +0.0062 +0.0047 -0.0191 +0 -0.0001
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2785 0.2805 +0.0183 -0.0240 +0.0287 +0 +0.0020
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0883 0.0885 +0.0048 -0.0054 -0.0067 +0 +0.0002
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0456 +0.0009 +0.0001 -0.0089 +0 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2036 0.2040 +0.0051 -0.0017 +0.0004 +0 +0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0225 0.0231 -0.0032 -0.0062 -0.0160 +0 +0.0006
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1020 -0.1019 +0.0043 -0.0045 -0.0054 +0 -0.0001
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 -0.0965 +0.0169 -0.0238 +0.0355 +0 +0
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 +0 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 +0 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 +0 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 +0 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0733 -0.0735 +0.0009 +0.0076 -0.0005 +0 +0.0002
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0411 -0.0422 -0.0089 +0.0045 +0.0004 +0 +0.0011
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0036 -0.0067 +0.0054 -0.0044 +0.0010 +0 +0.0031
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1206 -0.1209 +0.0013 +0.0005 -0.0055 +0 +0.0002
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0701 -0.0697 -0.0060 -0.0005 -0.0005 +0 -0.0004
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0310 -0.0330 -0.0084 +0.0078 -0.0007 +0 +0.0020
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0903 -0.0926 +0.0142 +0.0365 -0.0057 +0 +0.0023
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 +0 -0.0059
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0172 0.0100 -0.0338 -0.0246 +0.0154 +0 -0.0072
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 +0 -0.0002
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3056 -0.3046 +0.0072 +0.0066 -0.0010 +0 -0.0010
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0288 0.0286 +0.0002 -0.0402 -0.0012 +0 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0510 0.0489 +0.0124 -0.0135 -0.0021 +0 -0.0021
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1957 -0.1972 -0.0003 +0.0009 -0.0042 +0 +0.0014
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1803 0.1787 +0.0289 -0.0188 +0.0012 +0 -0.0015
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2211 0.2203 -0.0077 -0.0028 +0.0144 +0 -0.0008
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0557 -0.0500 +0.0048 +0.0016 -0.0170 +0 -0.0057
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2654 0.2730 +0.0504 -0.0481 +0.0073 +0 +0.0076
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0759 0.0773 +0.0031 -0.0032 -0.0081 +0 +0.0013
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0421 +0.0011 -0.0008 -0.0084 +0 +0.0001
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2033 0.2048 +0.0036 -0.0008 +0.0016 +0 +0.0015
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.0046 -0.0149 +0.0005 -0.0096 -0.0297 +0 +0.0104
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1085 -0.1123 +0.0056 -0.0034 -0.0033 +0 +0.0038
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1172 -0.1510 +0.0405 -0.0089 +0.0322 +0 +0.0338
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0700 -0.0655 +0.0258 +0.0029 -0.0003 +0 -0.0045
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0677 -0.0621 -0.0049 +0.0142 +0.0054 +0 -0.0056
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0041 0.0042 -0.0001 -0.0108 +0.0000 +0 +0.0001
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0408 -0.0407 +0.0137 -0.0048 +0.0001 +0 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 +0 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 +0 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0116 -0.0140 +0.0131 -0.0109 +0.0003 +0 +0.0024
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0578 -0.0596 -0.0435 -0.0160 +0.0023 +0 +0.0017
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0443 -0.0477 -0.0508 -0.0078 +0.0009 +0 +0.0034

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3078 0.3083 +0.0343 +0.0202 -0.0086 +0 +0.0005
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2099 0.2103 +0.0169 -0.0058 +0.0004 +0 +0.0004
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2608 0.2607 +0.0117 -0.0078 +0.0011 +0 -0.0001
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2980 0.2987 +0.0441 -0.0007 -0.0136 +0 +0.0007
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2193 0.2200 +0.0164 -0.0031 -0.0002 +0 +0.0007
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2680 0.2686 +0.0170 -0.0063 +0.0017 +0 +0.0006
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5756 0.5750 +0.0354 +0.0384 -0.0420 +0 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2411 1.2403 +0.2175 -0.0279 -0.1166 +0 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5708 0.5726 +0.0445 +0.0761 -0.1281 +0 +0.0017
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1512 0.1494 -0.0103 +0.0134 -0.0147 +0 -0.0018
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9575 0.9455 -0.0030 +0.1483 +0.0078 +0 -0.0120
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3505 0.3507 +0.0037 +0.0045 +0.0051 +0 +0.0002
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1517 0.1523 +0.0676 -0.0087 -0.0168 +0 +0.0006
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3353 0.3354 +0.0316 +0.0062 -0.0049 +0 +0.0001
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5768 0.5801 -0.0093 +0.0378 -0.0706 +0 +0.0033
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2479 0.2480 +0.0977 -0.0155 +0.0159 +0 +0.0001
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2751 1.2743 +0.0737 +0.1982 -0.0827 +0 -0.0008
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4827 0.4826 +0.0321 -0.0450 -0.0051 +0 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 0.5418 +0.0200 -0.0293 -0.0344 +0 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1520 0.1517 +0.0190 -0.0584 -0.0028 +0 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1943 0.1938 +0.0281 -0.0478 -0.0031 +0 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.1208 0.2198 +0.0149 -0.0182 -0.0054 +0 +0.0990
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0815 0.0976 +0.0035 +0.0005 +0.0043 +0 +0.0161
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1122 0.1440 -0.0157 -0.0104 +0.0083 +0 +0.0318
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1196 0.1920 -0.0042 +0.0002 -0.0084 +0 +0.0724
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0716 0.1032 +0.0032 -0.0030 +0.0035 +0 +0.0315
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1254 0.1647 +0.0000 +0.0073 -0.0081 +0 +0.0393
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.2657 0.4134 +0.0402 -0.0136 +0.0467 +0 +0.1477
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1086 0.1709 +0.0316 -0.0208 -0.0112 +0 +0.0623
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.3928 0.9133 +0.1306 -0.0136 -0.0647 +0 +0.5205
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0465 0.0612 +0.0032 +0.0034 -0.0021 +0 +0.0147
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0625 0.0762 +0.0110 -0.0047 +0.0013 +0 +0.0137
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0620 0.0756 +0.0055 -0.0000 +0.0038 +0 +0.0136
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0632 0.0769 +0.0026 +0.0079 -0.0036 +0 +0.0137
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0513 0.0568 +0.0015 +0.0006 +0.0010 +0 +0.0054
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1208 0.1406 +0.0296 -0.0022 -0.0025 +0 +0.0199
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.2277 0.3025 +0.0146 +0.0452 -0.0355 +0 +0.0749
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0486 0.0661 -0.0057 -0.0062 -0.0031 +0 +0.0175
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5005 0.5785 -0.1294 +0.1626 +0.0090 +0 +0.0780
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0691 0.0704 -0.0046 +0.0074 +0.0016 +0 +0.0013
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0433 0.0385 +0.0109 -0.0066 +0.0090 +0 -0.0048
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0824 0.0874 -0.0053 +0.0093 +0.0025 +0 +0.0050
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2174 0.2433 -0.0166 +0.0170 -0.0166 +0 +0.0258
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0738 0.1286 +0.0068 -0.0006 -0.0039 +0 +0.0548
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4304 0.5449 -0.0891 -0.0032 -0.0082 +0 +0.1145
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.2223 0.3349 +0.0682 -0.0593 -0.0056 +0 +0.1125
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.2435 0.3776 +0.0668 -0.0849 -0.0031 +0 +0.1341
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0528 0.0604 +0.0113 -0.0357 +0.0198 +0 +0.0076
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0488 0.0488 -0.0054 -0.0154 +0.0040 +0 +0.0000
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0608 0.0599 -0.0011 -0.0225 +0.0112 +0 -0.0009
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0457 0.0446 +0.0094 -0.0181 -0.0013 +0 -0.0011
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0675 0.0877 -0.0134 -0.0199 -0.0090 +0 +0.0202
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.2592 0.3193 +0.0271 -0.0671 +0.0055 +0 +0.0601
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.2754 0.3458 +0.0501 -0.0498 +0.0220 +0 +0.0704

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 175.4100 182.9700 -64.2600 -148.2000 -7.9200 +6.5400 +7.5600 -25.9920% -44.7504% -4.1490% +3.7069% +4.3099%
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 18.7000 23.0900 -0.9800 +5.7700 +3.2200 +5.9600 +4.3900 -4.0715% +33.3141% +16.2053% +34.7928% +23.4759%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 9.5800 9.2900 -3.4600 +0.2200 +0.9300 +0 -0.2900 -27.1373% +2.4256% +11.1244% +0% -3.0271%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.5500 10.1900 -2.1200 +1.2300 +0.5300 -0.6200 +0.6400 -17.2218% +13.7277% +5.4865% -5.7354% +6.7016%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2600 4.9100 +0.6800 +0.5000 -0.0300 +0.6500 +16.0757% +11.3379% -0.6073% +15.2582%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5000 5.5900 +0.2100 +1.2100 +0.8400 +1.0500 +1.0900 +3.9033% +27.6256% +17.6842% +23.1278% +24.2222%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.1400 5.2500 -0.1800 +1.1100 +0.8100 +0.5900 +1.1100 -3.3149% +26.8116% +18.2432% +12.6609% +26.8116%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.3200 4.9700 -0.5800 +0.5500 +0.4400 +0.5100 +0.6500 -10.4505% +12.4434% +9.7130% +11.4350% +15.0463%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 66.0200 61.6400 -14.7600 -1.2800 -8.3700 -3.1100 -4.3800 -19.3194% -2.0343% -11.9554% -4.8031% -6.6344%
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.4100 22.8400 -4.8200 +3.0800 +4.5200 +3.5600 +5.4300 -17.4259% +15.5870% +24.6725% +18.4647% +31.1890%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 25.9700 24.6000 -5.6900 -1.0900 -1.9600 -4.7700 -1.3700 -18.7851% -4.2429% -7.3795% -16.2411% -5.2753%
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.2500 5.8600 +0.0700 +1.2700 +1.2100 +1.7700 +1.6100 +1.2090% +27.6688% +26.0215% +43.2763% +37.8824%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 4.5300 4.7800 -1.4800 +0.3800 -1.1000 +0.2500 -23.6422% +8.6364% -18.7075% +5.5188%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8500 4.6300 +0.1100 +0.9000 -0.1700 +0.9900 +0.7800 +2.4336% +24.1287% -3.5417% +27.1978% +20.2597%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.6000 4.5700 -1.1700 +1.0600 +0.6500 +1.1300 +0.9700 -20.3833% +30.1994% +16.5816% +32.8488% +26.9444%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 6.3500 7.7600 +0.6900 +2.2300 +2.2500 +2.0200 +1.4100 +9.7595% +40.3255% +40.8348% +35.1916% +22.2047%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 6 6.7600 -0.8300 +1.0300 +0.6200 +1.2200 +0.7600 -10.9354% +17.9756% +10.0977% +22.0217% +12.6667%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.6500 5.6300 -1.7500 +0.7000 +1 +0.0100 +0.9800 -23.7127% +14.1988% +21.5983% +0.1779% +21.0753%
SCP_Astral_10ng_ms 6.4500 4.6700 4.3000 4.4100 4.3800 5.4300 -1.0200 +0.7600 +1.1300 +1.0200 +1.0500 -15.8140% +16.2741% +26.2791% +23.1293% +23.9726%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5300 4.5100 -0.2300 +0.8500 +1.1200 +0.9800 -4.8523% +23.2240% +33.0383% +27.7620%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.1400 4.0300 -1.2300 +0.1900 +0.2700 -0.1100 -23.3840% +4.9479% +7.1809% -2.6570%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.6400 3.5900 -1.0600 +0.1600 -0.1200 +0.1400 -0.0500 -22.7957% +4.6647% -3.2345% +4.0580% -1.3736%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.4500 4.0800 -0.0900 +0.7900 +0.3900 +0.8100 +0.6300 -2.1583% +24.0122% +10.5691% +24.7706% +18.2609%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.5000 4.6700 -0.6100 +1.1400 +1.0700 +1.1800 +1.1700 -11.5530% +32.2946% +29.7222% +33.8109% +33.4286%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.3600 4.2400 -1.2700 +0.4200 +0.0900 -0.5700 -0.1200 -23.0490% +10.9948% +2.1687% -11.8503% -2.7523%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.5900 4.2300 -0.5000 +0.7700 +0.6600 +0.6400 -10.5708% +22.2543% +18.4874% +17.8273%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.3800 3.9400 -0.7100 +0.3200 +0.2100 +0.1600 +0.5600 -15.2688% +8.8398% +5.6300% +4.2328% +16.5680%
SCP_Astral_MBR 9.0400 6.5500 6.1000 6.4000 6.4500 -2.5900 -0.1000 +0.3500 +0.0500 -28.6504% -1.5267% +5.7377% +0.7812%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 56.2500 50.0200 -50.3300 -15.6500 -10.0200 +1.3200 -6.2300 -50.1545% -23.8313% -16.6889% +2.7105% -11.0756%
Seer_Astral_single 4.4700 4.1400 5.5800 4.9000 6.2000 +1.7300 +2.0600 +0.6200 +1.3000 +38.7025% +49.7585% +11.1111% +26.5306%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 136.9900 141.7900 -93.8400 -110.2800 -21.8900 -1.4400 +4.8000 -39.8251% -43.7498% -13.3737% -1.0054% +3.5039%
EWZ_2P_MBR_Exploris 29 23.3100 24.4800 22.6000
EWZ_2P_MBR_Exploris 26.1800 28.1100 +1.9300 +7.3720%
EWZ_2P_MBR_Exploris_Human 12.9100 15.3900 +2.4800 +19.2099%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 16.4100 +4.3500 +36.0697%
EWZ_2P_noMBR_Exploris 27.1100 22.0100 21.8700 22.5600
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2300 +0.7200 +2.6172%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5200 +0.8500 +3.0719%

APMS_Astral

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

APMS_Astral_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

EWZ_2P_MBR_Exploris_YeastHuman

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

KEAP1KO_Eclipse

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

MacCoss_Eclipse_Normalization_yesNorm

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

Olsen_Astral_3P

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

Olsen_Astral_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Olsen_Exploris_3P

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCIEX_3P

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCIEX_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_250pg_12ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_45

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

Seer_Astral_45_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

YEAST_KO_Astral

protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_peptide_coverage_logit.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_10_pg_score_vs_prefix_shape.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png
protein_probit_fold_0_iter_1_pg_score_vs_coverage_log_ratio.png

YEAST_KO_Astral_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png