Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541
MTAC_3P_Alternating 586322 615762 610710 599881 599881 602621 +16299 -13141 -8089 +2740 +2740 +2.7799% -2.1341% -1.3245% +0.4568% +0.4568%
MTAC_3P_Standard 596590 623022 617574 607435 607435 610850 +14260 -12172 -6724 +3415 +3415 +2.3903% -1.9537% -1.0888% +0.5622% +0.5622%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 136435 -1113 -404 +875 +875 -0.8092% -0.2952% +0.6455% +0.6455%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 155743 +102 -808 -766 +708 +899 +0.0655% -0.5161% -0.4894% +0.4567% +0.5806%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 138090 -419 -1295 -1202 +205 +303 -0.3025% -0.9291% -0.8629% +0.1487% +0.2199%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 157365 -1597 -1367 -1795 -557 -557 -1.0046% -0.8612% -1.1278% -0.3527% -0.3527%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 41849 +967 +149 -576 -251 -251 +2.3653% +0.3573% -1.3577% -0.5962% -0.5962%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 41135 +66 -1267 -888 -17 -17 +0.1607% -2.9881% -2.1131% -0.0413% -0.0413%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 23032 +14292 -83 +17 +119 +119 +163.5240% -0.3591% +0.0739% +0.5194% +0.5194%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 18417 +1482 +864 +8 +69 +69 +8.7511% +4.9222% +0.0435% +0.3761% +0.3761%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 99514 -394 -3377 +531 +866 +866 -0.3944% -3.2821% +0.5365% +0.8779% +0.8779%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 71690 +592 -1038 +245 +564 +564 +0.8327% -1.4272% +0.3429% +0.7930% +0.7930%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 113510 -1647 -3806 -812 +429 +260 -1.4302% -3.2442% -0.7103% +0.3794% +0.2296%
SCP_Astral_10ng_ms 105704 106497 105622 104434 104512 104589 -1115 -1908 -1033 +155 +77 -1.0548% -1.7916% -0.9780% +0.1484% +0.0737%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 11028 +834 +222 -210 -205 -205 +8.1813% +2.0544% -1.8687% -1.8250% -1.8250%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 16096 +1289 +663 +55 +397 +397 +8.7053% +4.2960% +0.3429% +2.5288% +2.5288%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 2409 +1148 +377 -41 +23 +23 +91.0389% +18.5531% -1.6735% +0.9640% +0.9640%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 5318 +3882 +535 -372 -413 -413 +270.3343% +11.1854% -6.5378% -7.2064% -7.2064%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 22062 +352 +167 -518 -401 -401 +1.6214% +0.7627% -2.2941% -1.7852% -1.7852%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 24985 -875 -1158 -1275 -640 -640 -3.3836% -4.4295% -4.8553% -2.4976% -2.4976%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 6021 +2537 -877 -813 -813 +72.8186% -12.7138% -11.8964% -11.8964%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 12693 +1994 +1219 -189 -196 -196 +18.6373% +10.6240% -1.4672% -1.5207% -1.5207%
SCP_Astral_MBR 92167 93585 91884 90864 90838 91623 -544 -1962 -261 +759 +785 -0.5902% -2.0965% -0.2841% +0.8353% +0.8642%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 55630 -1069 -163 -261 -261 -1.8854% -0.2922% -0.4670% -0.4670%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346
EWZ_2P_MBR_Exploris_Human 836809 836809
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031
MTAC_3P_Alternating 108267 117352 114659 114816 114816 114761 +6494 -2591 +102 -55 -55 +5.9981% -2.2079% +0.0890% -0.0479% -0.0479%
MTAC_3P_Standard 110265 118693 115800 116148 116148 116816 +6551 -1877 +1016 +668 +668 +5.9411% -1.5814% +0.8774% +0.5751% +0.5751%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 49389 +531 +357 +394 +394 +1.0868% +0.7281% +0.8042% +0.8042%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 55965 +1996 +890 +125 +81 +144 +3.6984% +1.6160% +0.2239% +0.1449% +0.2580%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 50480 +1859 +815 +191 +20 +65 +3.8235% +1.6410% +0.3798% +0.0396% +0.1289%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 56441 +1381 +522 -266 -386 -386 +2.5082% +0.9335% -0.4691% -0.6793% -0.6793%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 15480 +1040 +522 +231 -227 -227 +7.2022% +3.4898% +1.5149% -1.4452% -1.4452%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 15043 +560 -22 +127 -27 -29 +3.8666% -0.1460% +0.8514% -0.1792% -0.1924%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 9339 +599 -37 -50 -25 -46 +6.8535% -0.3946% -0.5325% -0.2670% -0.4901%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 9800 +902 +541 +16 -10 -10 +10.1371% +5.8430% +0.1635% -0.1019% -0.1019%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 34657 -208 -1640 +315 +232 +232 -0.5966% -4.5183% +0.9172% +0.6739% +0.6739%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 25384 +735 -82 +265 +161 +161 +2.9819% -0.3220% +1.0550% +0.6383% +0.6383%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 39951 -205 -1594 -92 +58 +5 -0.5105% -3.8368% -0.2298% +0.1454% +0.0125%
SCP_Astral_10ng_ms 36688 37676 37649 37421 37459 37727 +1039 +51 +78 +306 +268 +2.8320% +0.1354% +0.2072% +0.8177% +0.7154%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 4201 +535 +252 -8 -45 -45 +14.5936% +6.3814% -0.1901% -1.0598% -1.0598%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 6170 +871 +559 +315 +104 +103 +16.4371% +9.9626% +5.3800% +1.7145% +1.6977%
SCP_Astral_250pg_3ms 675 721 908 879 879 890 +215 +169 -18 +11 +11 +31.8519% +23.4397% -1.9824% +1.2514% +1.2514%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 2046 +610 +308 -99 -117 -119 +42.4791% +17.7215% -4.6154% -5.4092% -5.4965%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 8247 +453 +275 -5 -159 -161 +5.8122% +3.4496% -0.0606% -1.8915% -1.9148%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 9396 +238 +54 +25 -18 -19 +2.5988% +0.5780% +0.2668% -0.1912% -0.2018%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 2251 +405 -349 -335 -338 +21.9393% -13.4231% -12.9544% -13.0552%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 4781 +907 +626 +7 -24 -23 +23.4125% +15.0662% +0.1466% -0.4995% -0.4788%
SCP_Astral_MBR 24110 24991 24570 24544 24527 24897 +787 -94 +327 +353 +370 +3.2642% -0.3761% +1.3309% +1.4382% +1.5085%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 55630 -1069 -163 -261 -261 -1.8854% -0.2922% -0.4670% -0.4670%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147
EWZ_2P_MBR_Exploris_Human 48465 48473
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177
MacCoss_Eclipse_Normalization_noNorm 73278 73277
MacCoss_Eclipse_Normalization_yesNorm 73278 73277

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286
MTAC_3P_Alternating 63773 63974 63611 63015 65835 65486 +1713 +1512 +1875 +2471 -349 +2.6861% +2.3635% +2.9476% +3.9213% -0.5301%
MTAC_3P_Standard 64317 64464 64219 63385 65967 65631 +1314 +1167 +1412 +2246 -336 +2.0430% +1.8103% +2.1987% +3.5434% -0.5093%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12213 +146 +243 +273 -26 +1.2099% +2.0301% +2.2864% -0.2124%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 12650 +218 +179 +288 +322 -10 +1.7535% +1.4353% +2.3297% +2.6119% -0.0790%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12237 +229 +190 +277 +269 +57 +1.9071% +1.5772% +2.3161% +2.2477% +0.4680%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 12808 +247 +343 +331 +398 +34 +1.9664% +2.7517% +2.6529% +3.2071% +0.2662%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 9989 +826 +461 +404 +655 -33 +9.0145% +4.8384% +4.2149% +7.0174% -0.3293%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 9672 +374 -89 +260 +119 -317 +4.0224% -0.9118% +2.7624% +1.2457% -3.1735%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 6212 +3762 +128 -35 +96 -137 +153.5510% +2.1039% -0.5603% +1.5697% -2.1578%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 5062 +359 +474 +104 +139 +113 +7.6334% +10.3313% +2.0976% +2.8235% +2.2833%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 16714 +524 +434 +689 +659 +178 +3.2366% +2.6658% +4.2995% +4.1046% +1.0764%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 13964 +365 +123 +276 +293 -20 +2.6840% +0.8887% +2.0164% +2.1432% -0.1430%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 17461 +444 +283 +548 +716 +112 +2.6092% +1.6475% +3.2401% +4.2759% +0.6456%
SCP_Astral_10ng_ms 16252 16276 16117 15925 16458 16543 +291 +267 +426 +618 +85 +1.7905% +1.6405% +2.6432% +3.8807% +0.5165%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 3816 +169 -97 -48 +277 +2 +4.6339% -2.4789% -1.2422% +7.8271% +0.0524%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 4762 +462 +159 -35 -215 -407 +10.7442% +3.4543% -0.7296% -4.3199% -7.8739%
SCP_Astral_250pg_3ms 576 22 936 741 736 758 +182 +736 -178 +17 +22 +31.5972% +3345.4545% -19.0171% +2.2942% +2.9891%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 2051 +1414 -29 +22 +5 -17 +221.9780% -1.3942% +1.0843% +0.2444% -0.8221%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 6270 +25 -76 +254 +143 +51 +0.4003% -1.1976% +4.2221% +2.3339% +0.8201%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 6657 -65 -72 -355 -366 -685 -0.9670% -1.0700% -5.0627% -5.2114% -9.3299%
SCP_Astral_500pg_3ms 982 2365 2177 2236 1872 +890 -493 -305 -364 +90.6314% -20.8457% -14.0101% -16.2791%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 4023 +315 +16 -22 +105 -80 +8.4951% +0.3993% -0.5439% +2.6799% -1.9498%
SCP_Astral_MBR 20165 20129 20074 19793 19898 19581 -584 -548 -493 -212 -317 -2.8961% -2.7224% -2.4559% -1.0711% -1.5931%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4774 +89 +74 +142 +35 +1.8997% +1.5745% +3.0656% +0.7386%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422
EWZ_2P_MBR_Exploris_Human 115447 117345
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706
MacCoss_Eclipse_Normalization_noNorm 178174 183543
MacCoss_Eclipse_Normalization_yesNorm 178174 183543

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249
MTAC_3P_Alternating 11361 11494 11351 11338 11798 11746 +385 +252 +395 +408 -52 +3.3888% +2.1924% +3.4799% +3.5985% -0.4408%
MTAC_3P_Standard 11473 11560 11477 11396 11832 11804 +331 +244 +327 +408 -28 +2.8850% +2.1107% +2.8492% +3.5802% -0.2366%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4193 +65 +101 +93 +10 +1.5746% +2.4682% +2.2683% +0.2391%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4315 +100 +67 +97 +101 -22 +2.3725% +1.5772% +2.2997% +2.3968% -0.5073%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4200 +125 +66 +110 +103 +15 +3.0675% +1.5965% +2.6895% +2.5140% +0.3584%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4358 +109 +121 +114 +127 +4 +2.5653% +2.8558% +2.6861% +3.0017% +0.0919%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 3541 +296 +152 +130 +223 -20 +9.1217% +4.4851% +3.8112% +6.7209% -0.5616%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3386 +132 -47 +95 -48 -106 +4.0565% -1.3691% +2.8867% -1.3978% -3.0355%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 2397 -53 +1 -53 +0 -37 -2.1633% +0.0417% -2.1633% +0% -1.5201%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 2616 +108 +180 -18 -26 +33 +4.3062% +7.3892% -0.6834% -0.9841% +1.2776%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 5694 +115 +38 +190 +148 +40 +2.0613% +0.6719% +3.4520% +2.6686% +0.7075%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 4840 +119 +2 +57 +29 -4 +2.5207% +0.0413% +1.1917% +0.6028% -0.0826%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 5967 +121 +18 +124 +162 +2 +2.0698% +0.3026% +2.1222% +2.7907% +0.0335%
SCP_Astral_10ng_ms 5611 5655 5596 5553 5713 5731 +120 +76 +135 +178 +18 +2.1387% +1.3439% +2.4124% +3.2055% +0.3151%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 1371 +79 -53 -35 +83 +12 +6.1146% -3.7219% -2.4893% +6.4441% +0.8830%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 1741 +173 +81 -17 -132 -129 +11.0332% +4.8795% -0.9670% -7.0475% -6.8984%
SCP_Astral_250pg_3ms 307 8 350 283 281 275 -32 +267 -75 -8 -6 -10.4235% +3337.5000% -21.4286% -2.8269% -2.1352%
SCP_Astral_250pg_6ms 637 756 751 766 767 805 +168 +49 +54 +39 +38 +26.3736% +6.4815% +7.1904% +5.0914% +4.9544%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2230 +23 -45 +61 +0 +13 +1.0421% -1.9780% +2.8124% +0% +0.5864%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2382 -21 -6 -95 -157 -216 -0.8739% -0.2513% -3.8353% -6.1835% -8.3141%
SCP_Astral_500pg_3ms 525 902 828 835 756 +231 -146 -72 -79 +44% -16.1863% -8.6957% -9.4611%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 1453 +135 +6 -33 +18 -15 +10.2428% +0.4147% -2.2207% +1.2544% -1.0218%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4680 -28 -40 -32 -35 -36 -0.5947% -0.8475% -0.6791% -0.7423% -0.7634%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4774 +89 +74 +142 +35 +1.8997% +1.5745% +3.0656% +0.7386%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106
EWZ_2P_MBR_Exploris_Human 6167 6284
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963
MacCoss_Eclipse_Normalization_noNorm 5804 5955
MacCoss_Eclipse_Normalization_yesNorm 5804 5955

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279
MTAC_3P_Alternating 65832 65483 -349
MTAC_3P_Standard 65967 65631 -336
MTAC_Yeast_Alternating_3min 12239 12213 -26
MTAC_Yeast_Alternating_5min 12660 12650 -10
MTAC_Yeast_Standard_3min 12180 12237 +57
MTAC_Yeast_Standard_5min 12772 12806 +34
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 9989 -33
SCP_Astral_1000pg_24ms 9989 9672 -317
SCP_Astral_1000pg_3ms 6349 6212 -137
SCP_Astral_1000pg_6ms 4949 5062 +113
SCP_Astral_10ng_12ms 16536 16714 +178
SCP_Astral_10ng_24ms 13982 13964 -18
SCP_Astral_10ng_6ms 17349 17461 +112
SCP_Astral_10ng_ms 16458 16541 +83
SCP_Astral_250pg_12ms 3814 3816 +2
SCP_Astral_250pg_24ms 5169 4762 -407
SCP_Astral_250pg_3ms 736 758 +22
SCP_Astral_250pg_6ms 2066 2043 -23
SCP_Astral_500pg_12ms 6219 6270 +51
SCP_Astral_500pg_24ms 7342 6657 -685
SCP_Astral_500pg_3ms 2234 1870 -364
SCP_Astral_500pg_6ms 4103 4023 -80
SCP_Astral_MBR 19891 19578 -313
Seer_Astral_45 242898
Seer_Astral_single 4739 4774 +35
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422
EWZ_2P_MBR_Exploris_Human 117340
EWZ_2P_MBR_Exploris_YeastHuman 130702
MacCoss_Eclipse_Normalization_noNorm 183540
MacCoss_Eclipse_Normalization_yesNorm 183540

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0010 -0.0005 -0.0009 -0.0000 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0009 +0.0005 -0.0013 -0.0003 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0032 -0.0017 -0.0014 -0.0006 -0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0016 -0.0012 -0.0003 -0.0002 -0.0001 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0021 -0.0002 -0.0008 -0.0009 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0015 -0.0004 +0.0005 +0.0009 +0.0011
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0036 -0.0013 -0.0006 -0.0015
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 -0.0014 +0.0040 +0.0019 +0.0018 +0.0032 +0.0032
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 -0.0022 +0.0008 +0.0026 +0.0008 +0.0016 +0.0024
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 -0.0006 -0.0003 +0.0005 +0.0030 +0.0020 +0.0020
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0008 +0.0014 +0.0009 +0.0016 +0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0010 +0.0011 -0.0018 +0.0005 +0.0003 +0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0029 -0.0005 -0.0003 -0.0011 -0.0012 -0.0012
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0027 -0.0019 -0.0028 -0.0006 -0.0015 -0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0018 +0.0057 +0.0058 +0.0015 +0.0070 +0.0070
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0027 -0.0025 -0.0015 -0.0003 +0.0004 +0.0004
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 -0.0059 -0.0008 -0.0033 -0.0010 -0.0015
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0015 +0.0006 -0.0005 +0.0012 +0.0011 +0.0011
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 -0.0011 +0.0002 +0.0013 +0.0001 +0.0000 +0.0000
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0001 +0.0014 +0.0024 +0.0036 +0.0036
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 -0.0040 -0.0009 -0.0007 -0.0025 -0.0025
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0020 +0.0006 -0.0000 -0.0006 +0.0002 +0.0002
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0008 +0.0014 +0.0014
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0032 -0.0022 -0.0021 -0.0038 -0.0040 -0.0022
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0022 -0.0009 +0.0003 +0.0007 +0.0004 +0.0021
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0037 +0.0029 +0.0016 +0.0011 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0019 +0.0023 +0.0020 +0.0030 +0.0015 +0.0038
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0031 +0.0027 +0.0016 -0.0012 -0.0004 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0035 +0.0001 +0.0010 +0.0021 +0.0019
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0060 -0.0011 -0.0018 -0.0017 -0.0019
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0001 +0.0069 +0.0057 +0.0069 +0.0070 +0.0082
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0077 -0.0018 -0.0018 -0.0005 -0.0006 +0.0009
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0036 -0.0018 +0.0014 +0.0007 +0.0009 +0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0045 +0.0009 -0.0006 +0.0008 +0.0015
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0040 -0.0007 -0.0017 -0.0024 +0.0005 -0.0004
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0048 -0.0012 +0.0025 +0.0018 +0.0012 +0.0012
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0034 +0.0020 -0.0014 +0.0020 +0.0012 +0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0044 +0.0009 +0.0032 -0.0010 +0.0020 +0.0017
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0026 +0.0016 +0.0016 -0.0000 -0.0013 +0.0016
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0090 -0.0062 -0.0090 -0.0004 -0.0090 -0.0090
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 -0.0089 +0.0010 -0.0023 -0.0005 -0.0001 -0.0001
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0013 +0.0048 +0.0052 -0.0002 +0.0033 +0.0037
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0020 +0.0040 +0.0021 +0.0071 +0.0082 +0.0080
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0001 +0.0040 -0.0072 -0.0021 -0.0000 +0.0001
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 -0.0015 +0.0030 +0.0030 -0.0007 +0.0041 +0.0028
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0031 +0.0028 -0.0002 -0.0006 +0.0019 +0.0025
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 -0.0007 +0.0067 +0.0066
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0007 -0.0006 -0.0010 -0.0005 -0.0006 -0.0006
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0006 +0.0003 -0.0008 -0.0002 -0.0003 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0017 -0.0008 -0.0005 -0.0003 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0008 -0.0004 -0.0000 +0.0002 +0.0001 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0011 -0.0003 -0.0004 -0.0003 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 -0.0007 +0.0001 +0.0003 +0.0008 +0.0008
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0019 -0.0003 +0.0011 +0.0000
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 -0.0001 +0.0045 +0.0027 +0.0030 +0.0036 +0.0036
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 -0.0013 +0.0007 +0.0016 +0.0013 +0.0013 +0.0021
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 -0.0004 -0.0006 +0.0001 +0.0023 +0.0019 +0.0019
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0007 +0.0009 +0.0003 +0.0008 +0.0008
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0007 +0.0006 -0.0011 +0.0005 +0.0001 +0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0021 -0.0001 -0.0001 -0.0005 -0.0006 -0.0006
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0014 -0.0009 -0.0016 -0.0002 -0.0005 -0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0003 +0.0033 +0.0030 +0.0006 +0.0035 +0.0035
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0015 -0.0007 -0.0006 -0.0001 -0.0001 -0.0001
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 -0.0022 +0.0015 -0.0001 +0.0008 +0.0008
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0015 +0.0003 -0.0012 +0.0005 -0.0002 -0.0002
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 -0.0002 +0.0014 +0.0015 +0.0016 +0.0014 +0.0014
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0018 -0.0001 +0.0021 +0.0033 +0.0033
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 -0.0019 +0.0006 -0.0000 -0.0010 -0.0010
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 -0.0008 +0.0010 +0.0007 +0.0000 +0.0005 +0.0005
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0008 +0.0014 +0.0014
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0023 -0.0021 -0.0020 -0.0025 -0.0025 -0.0017
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0011 -0.0002 +0.0003 +0.0010 +0.0008 +0.0013
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0018 +0.0018 +0.0015 +0.0011 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 -0.0010 +0.0028 +0.0012 +0.0015 +0.0004 +0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0025 +0.0013 +0.0010 -0.0011 -0.0009 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0016 +0.0007 +0.0011 +0.0021 +0.0018
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0037 +0.0001 -0.0014 -0.0004 +0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0002 +0.0047 +0.0054 +0.0056 +0.0041 +0.0058
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0069 -0.0025 -0.0036 -0.0029 -0.0038 -0.0005
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0015 +0.0010 +0.0020 +0.0025 +0.0025 +0.0018
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0039 +0.0008 -0.0008 +0.0002 +0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0033 -0.0001 -0.0019 -0.0018 -0.0007 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0040 -0.0019 +0.0006 -0.0002 -0.0007 -0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0029 +0.0010 -0.0010 +0.0009 +0.0000 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0024 +0.0015 +0.0017 -0.0005 +0.0006 +0.0021
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0025 -0.0012 +0.0006 -0.0022 -0.0025 +0.0003
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0060 +0.0001 +0.0022 -0.0013 -0.0060 -0.0060
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 -0.0055 +0.0045 +0.0013 +0.0000 -0.0007 -0.0007
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0005 +0.0045 +0.0040 +0.0013 +0.0033 +0.0027
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0031 +0.0050 +0.0030 +0.0074 +0.0075 +0.0098
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 -0.0019 +0.0013 -0.0085 -0.0047 -0.0022 -0.0021
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 -0.0006 +0.0014 +0.0016 -0.0015 +0.0022 +0.0012
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0025 -0.0001 -0.0008 -0.0003 +0.0003 +0.0016
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 -0.0010 +0.0065 +0.0059
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 +1 +2 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 +4 +1 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 +4 +0 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 +3 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1386 -0.0073 -0.0035 -0.0014 +0.0012 +0.0011
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1329 -0.0064 -0.0034 -0.0023 +0.0005 +0.0004
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1404 -0.0051 -0.0020 -0.0004 -0.0005
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1373 -0.0157 -0.0036 -0.0003 +0.0017 +0.0019
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1589 -0.0109 -0.0050 -0.0026 -0.0010 -0.0009
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1329 -0.0175 -0.0038 -0.0008 +0.0006 +0.0005
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0756 -0.0007 +0.0017 +0.0029 +0.0035 -0.0002
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0711 -0.0012 +0.0009 +0.0012 +0.0023 -0.0006
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0680 +0.0007 +0.0019 +0.0021 -0.0007
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0612 -0.0166 +0.0009 +0.0019 +0.0024 +0.0011
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0777 -0.0015 +0.0021 +0.0024 +0.0005 +0.0002
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0596 -0.0174 +0.0029 +0.0028 +0.0028 +0.0013
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 -0.0736 -0.0020 +0.0070 +0.0012 +0.0000 -0.0040
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0378 -0.0076 +0.0055 -0.0002 -0.0001 -0.0030
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0030 +0.0007 -0.0023 -0.0001 -0.0000 +0.0022
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.1330 +0.0012 -0.0008 +0.0020 -0.0002 +0.0063
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0728 -0.0054 -0.0006 -0.0003 +0.0001 +0.0005
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0269 -0.0080 +0.0050 -0.0016 -0.0001 -0.0021
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 -0.0059 -0.0059 +0.0211 -0.0012
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 +0.0062 +0.0047 -0.0191 -0.0001
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 +0.0183 -0.0240 +0.0287 +0.0020
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 +0.0048 -0.0054 -0.0067 +0.0002
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 +0.0009 +0.0001 -0.0089 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 +0.0051 -0.0017 +0.0004 +0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 -0.0032 -0.0062 -0.0160 +0.0006
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 +0.0043 -0.0045 -0.0054 -0.0001
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 +0.0169 -0.0238 +0.0355 +0
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 -0.0719 +0.0009 +0.0076 -0.0005 +0.0006 -0.0021
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0382 -0.0089 +0.0045 +0.0004 +0.0011 -0.0040
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 -0.0020 +0.0054 -0.0044 +0.0010 +0.0033 -0.0049
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.1282 +0.0013 +0.0005 -0.0055 +0.0004 +0.0071
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0700 -0.0060 -0.0005 -0.0005 -0.0005 +0.0004
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0323 -0.0084 +0.0078 -0.0007 +0.0020 -0.0007
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 -0.0077 -0.0028 +0.0144 -0.0004
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 +0.0048 +0.0016 -0.0170 -0.0057
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 +0.0504 -0.0481 +0.0073 +0.0089
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 +0.0031 -0.0032 -0.0081 +0.0006
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 +0.0011 -0.0008 -0.0084 -0.0000
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 +0.0036 -0.0008 +0.0016 +0.0018
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 +0.0005 -0.0096 -0.0297 +0.0070
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 +0.0056 -0.0034 -0.0033 +0.0038
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 +0.0405 -0.0089 +0.0322 +0.0276
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.3006 +0.0343 +0.0202 -0.0086 +0.0005 -0.0077
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.2086 +0.0169 -0.0058 +0.0004 +0.0004 -0.0017
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.2646 +0.0117 -0.0078 +0.0011 -0.0001 +0.0039
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.3029 +0.0441 -0.0007 -0.0136 +0.0007 +0.0042
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.2239 +0.0164 -0.0031 -0.0002 +0.0007 +0.0040
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.2752 +0.0170 -0.0063 +0.0017 +0.0006 +0.0066
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 +0.0445 +0.0761 -0.1281 +0.0017
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 -0.0103 +0.0134 -0.0147 -0.0018
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 -0.0030 +0.1483 +0.0078 -0.0120
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 +0.0037 +0.0045 +0.0051 +0.0002
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 +0.0676 -0.0087 -0.0168 +0.0006
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 +0.0316 +0.0062 -0.0049 +0.0001
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 -0.0093 +0.0378 -0.0706 +0.0033
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 +0.0977 -0.0155 +0.0159 +0.0001
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 +0.0737 +0.1982 -0.0827 -0.0008
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.1871 +0.0149 -0.0182 -0.0054 +0.1015 -0.0352
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0953 +0.0035 +0.0005 +0.0043 +0.0189 -0.0051
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.1674 -0.0157 -0.0104 +0.0083 +0.0352 +0.0201
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.1758 -0.0042 +0.0002 -0.0084 +0.0711 -0.0149
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0945 +0.0032 -0.0030 +0.0035 +0.0313 -0.0084
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.1608 +0.0000 +0.0073 -0.0081 +0.0305 +0.0049
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 +0.0146 +0.0452 -0.0355 +0.0761
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 -0.0057 -0.0062 -0.0031 +0.0154
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 -0.1294 +0.1626 +0.0090 +0.0813
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 -0.0046 +0.0074 +0.0016 +0.0039
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 +0.0109 -0.0066 +0.0090 -0.0065
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 -0.0053 +0.0093 +0.0025 +0.0083
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 -0.0166 +0.0170 -0.0166 +0.0315
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 +0.0068 -0.0006 -0.0039 +0.0560
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 -0.0891 -0.0032 -0.0082 +0.0618
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.3900 -3.3600 +0.3200 +1.0300 +0.1000 +1.2600 -26.3529% +3.5281% +12.3206% +1.0764% +15.4982%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 11.3800 -0.9300 +2.4200 +1.7200 +0.5700 +1.5900 -7.5548% +27.0089% +17.8054% +5.2729% +16.2411%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.3800 +0.1500 -0.0300 -0.5600 +0.1000 +3.5461% -0.6803% -11.3360% +2.3364%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.4900 -0.8900 +0.1100 -0.2600 -0.0500 -0.0700 -16.5428% +2.5114% -5.4737% -1.1013% -1.5351%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.5500 -0.8800 +0.4100 +0.1100 -0.1100 +0.3100 -16.2063% +9.9034% +2.4775% -2.3605% +7.3113%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.7200 -0.8300 +0.3000 +0.1900 +0.2600 +0.1800 -14.9550% +6.7873% +4.1943% +5.8296% +3.9648%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.5500 -0.2400 +0.9600 +0.9000 +1.4600 +1.1900 -4.1451% +20.9150% +19.3548% +35.6968% +27.2936%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.1100 -1.1500 +0.7100 -0.7700 +0.1000 -18.3706% +16.1364% -13.0952% +1.9960%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.4300 -0.0900 +0.7000 -0.3700 +0.7900 +0.6000 -1.9912% +18.7668% -7.7083% +21.7033% +15.6658%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.0400 -1.7000 +0.5300 +0.1200 +0.6000 +0.3200 -29.6167% +15.0997% +3.0612% +17.4419% +8.6022%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.0100 -1.0600 +0.4800 +0.5000 +0.2700 +0.5400 -14.9929% +8.6799% +9.0744% +4.7038% +9.8720%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.1500 -1.4400 +0.4200 +0.0100 +0.6100 +0.2600 -18.9723% +7.3298% +0.1629% +11.0108% +4.4143%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.4400 -1.9400 +0.5100 +0.8100 -0.1800 +0.4800 -26.2873% +10.3448% +17.4946% -3.2028% +9.6774%
SCP_Astral_10ng_ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.2300 -1.2200 +0.5600 +0.9300 +0.8200 +0.8100 -18.9147% +11.9914% +21.6279% +18.5941% +18.3258%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.2100 -0.5300 +0.5500 +0.8200 +0.6200 -11.1814% +15.0273% +24.1888% +17.2702%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.3800 -0.8800 +0.5400 +0.6200 +0.3200 -16.7300% +14.0625% +16.4894% +7.8818%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.0700 -0.5800 +0.6400 +0.3600 +0.6200 +0.5200 -12.4731% +18.6589% +9.7035% +17.9710% +14.6479%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 3.9100 -0.2600 +0.6200 +0.2200 +0.6400 +0.3900 -6.2350% +18.8450% +5.9621% +19.5719% +11.0795%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.1700 -1.1100 +0.6400 +0.5700 +0.6800 +0.4700 -21.0227% +18.1303% +15.8333% +19.4842% +12.7027%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 8.4800 +2.9700 +4.6600 +4.3300 +3.6700 +4.4500 +53.9020% +121.9895% +104.3373% +76.2994% +110.4218%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.1300 -0.6000 +0.6700 +0.5600 +0.3600 -12.6850% +19.3642% +15.6863% +9.5491%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.0900 -0.5600 +0.4700 +0.3600 +0.3100 +0.5900 -12.0430% +12.9834% +9.6515% +8.2011% +16.8571%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.4500 -1.5900 +0.9000 +1.3500 +0.2400 -17.5885% +13.7405% +22.1311% +3.3287%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.0600 +0.5900 +0.9200 -0.5200 -0.1600 +13.1991% +22.2222% -9.3190% -3.0651%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png