Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6780461
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1284406 1320099 +223605 +13094 +8144 +26558 +35693 +20.3927% +1.0018% +0.6208% +2.0531% +2.7789%
MTAC_3P_Alternating 586322 615762 610710 599881 617552 631816 +45494 +16054 +21106 +31935 +14264 +7.7592% +2.6072% +3.4560% +5.3236% +2.3098%
MTAC_3P_Standard 596590 623022 617574 607435 624112 638370 +41780 +15348 +20796 +30935 +14258 +7.0031% +2.4635% +3.3674% +5.0927% +2.2845%
MTAC_Yeast_Alternating_3min 137548 136839 135560 143527 145810 +8262 +8971 +10250 +2283 +6.0066% +6.5559% +7.5612% +1.5906%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 162146 163978 +8337 +7427 +7469 +8943 +1832 +5.3566% +4.7441% +4.7722% +5.7684% +1.1298%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 144902 147683 +9174 +8298 +8391 +9798 +2781 +6.6234% +5.9533% +6.0240% +7.1059% +1.9192%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 163364 165198 +6236 +6466 +6038 +7276 +1834 +3.9230% +4.0735% +3.7937% +4.6073% +1.1226%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3430707
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1315141 1332045 +309309 +177376 +208172 +147961 +16904 +30.2433% +15.3616% +18.5227% +12.4958% +1.2853%
SCIEX_3P 672242 749525 722698 714454 737429
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 50408 51028 +10146 +9328 +8603 +8928 +620 +24.8178% +22.3693% +20.2781% +21.2067% +1.2300%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 48770 48966 +7897 +6564 +6943 +7814 +196 +19.2286% +15.4804% +16.5219% +18.9881% +0.4019%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 39091 39818 +31078 +16703 +16803 +16905 +727 +355.5835% +72.2604% +73.0089% +73.7791% +1.8598%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 27013 27063 +10128 +9510 +8654 +8715 +50 +59.8051% +54.1788% +47.0096% +47.4984% +0.1851%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 111950 112474 +12566 +9583 +13491 +13826 +524 +12.5776% +9.3137% +13.6296% +14.0155% +0.4681%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 82425 83012 +11914 +10284 +11567 +11886 +587 +16.7572% +14.1404% +16.1901% +16.7112% +0.7122%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 118105 119189 +13485 +12692 +13567 +14755 +1084 +12.7573% +11.9177% +12.8449% +14.1285% +0.9178%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 124016 124756 +9599 +7440 +10434 +11675 +740 +8.3356% +6.3418% +9.1269% +10.3245% +0.5967%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 17755 17870 +7676 +7064 +6632 +6637 +115 +75.2992% +65.3711% +59.0141% +59.0848% +0.6477%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 19443 19885 +5078 +4452 +3844 +4186 +442 +34.2946% +28.8473% +23.9636% +26.6641% +2.2733%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 7838 7893 +6632 +5861 +5443 +5507 +55 +525.9318% +288.4350% +222.1633% +230.8047% +0.7017%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 13463 13587 +12151 +8804 +7897 +7856 +124 +846.1699% +184.0686% +138.7873% +137.0790% +0.9210%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 30138 30427 +8717 +8532 +7847 +7964 +289 +40.1520% +38.9678% +34.7520% +35.4539% +0.9589%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 29951 30264 +4404 +4121 +4004 +4639 +313 +17.0302% +15.7633% +15.2475% +18.1034% +1.0450%
SCP_Astral_500pg_3ms 3484 6898 6834 17468 17865 +14381 +10967 +11031 +397 +412.7727% +158.9881% +161.4135% +2.2727%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 25826 26245 +15546 +14771 +13363 +13356 +419 +145.3033% +128.7345% +103.7339% +103.6232% +1.6224%
SCP_Astral_MBR 92167 93585 91884 90864 105889 107561 +15394 +13976 +15677 +16697 +1672 +16.7023% +14.9340% +17.0617% +18.3758% +1.5790%
Seer_Astral_45 2512737 3124006 3135497 2971207 3002843
Seer_Astral_single 56699 55793 55891 58025 58025 +1326 +2232 +2134 +0 +2.3387% +4.0005% +3.8181% +0%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17320764
EWZ_2P_MBR_Exploris 1776128 1855012 1889983 +113855 +34971 +6.4103% +1.8852%
EWZ_2P_MBR_Exploris_Human 836809 876894 886389 +49580 +9495 +5.9249% +1.0828%
EWZ_2P_MBR_Exploris_YeastHuman 914924 975923 986945 +72021 +11022 +7.8718% +1.1294%
MacCoss_Eclipse_Normalization_noNorm 2078034 2237537 2312490 +234456 +74953 +11.2826% +3.3498%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2237537 2312490 +234456 +74953 +11.2826% +3.3498%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 113299
KEAP1KO_Eclipse 111504 133619 131359 132031 145905 145905 +34401 +12286 +14546 +13874 +0 +30.8518% +9.1948% +11.0735% +10.5081% +0%
MTAC_3P_Alternating 108267 117352 114659 114816 121363 121363 +13096 +4011 +6704 +6547 +0 +12.0960% +3.4179% +5.8469% +5.7022% +0%
MTAC_3P_Standard 110265 118693 115800 116148 122895 122895 +12630 +4202 +7095 +6747 +0 +11.4542% +3.5402% +6.1269% +5.8090% +0%
MTAC_Yeast_Alternating_3min 48858 49032 48995 53863 53862 +5004 +4830 +4867 -1 +10.2419% +9.8507% +9.9337% -0.0019%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 60319 60319 +6350 +5244 +4479 +4435 +0 +11.7660% +9.5216% +8.0211% +7.9361% +0%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 55005 55005 +6384 +5340 +4716 +4545 +0 +13.1301% +10.7520% +9.3778% +9.0071% +0%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 60460 60460 +5400 +4541 +3753 +3633 +0 +9.8075% +8.1207% +6.6182% +6.3931% +0%
Olsen_Astral_3P 198770 231103 234505 234149 237050
Olsen_Exploris_3P 51272 58784 55047 58593 70903 70903 +19631 +12119 +15856 +12310 +0 +38.2880% +20.6162% +28.8045% +21.0093% +0%
SCIEX_3P 82206 93920 87927 87858 99825
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 19045 19045 +4605 +4087 +3796 +3338 +0 +31.8906% +27.3232% +24.8934% +21.2517% +0%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 18005 18005 +3522 +2940 +3089 +2935 +0 +24.3182% +19.5154% +20.7093% +19.4758% +0%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 15749 15757 +7017 +6381 +6368 +6393 +8 +80.2860% +68.0567% +67.8240% +68.2721% +0.0508%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 15297 15297 +6399 +6038 +5513 +5487 +0 +71.9150% +65.2122% +56.3471% +55.9327% +0%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 40288 40288 +5423 +3991 +5946 +5863 +0 +15.5543% +10.9954% +17.3141% +17.0312% +0%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 29919 29919 +5270 +4453 +4800 +4696 +0 +21.3802% +17.4861% +19.1090% +18.6179% +0%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 43088 43089 +6401 +5413 +5440 +5668 +1 +17.4471% +14.3672% +14.4493% +15.1466% +0.0023%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 44504 44504 +4348 +2959 +4461 +4611 +0 +10.8278% +7.1224% +11.1405% +11.5584% +0%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7199 7199 +3533 +3250 +2990 +2953 +0 +96.3721% +82.2993% +71.0383% +69.5478% +0%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 7756 7756 +2457 +2145 +1901 +1690 +0 +46.3672% +38.2285% +32.4680% +27.8602% +0%
SCP_Astral_250pg_3ms 675 721 908 879 3595 3604 +2929 +2883 +2696 +2725 +9 +433.9259% +399.8613% +296.9163% +310.0114% +0.2503%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 5562 5563 +4127 +3825 +3418 +3400 +1 +287.3955% +220.0806% +159.3473% +157.1891% +0.0180%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 11774 11774 +3980 +3802 +3522 +3368 +0 +51.0649% +47.6919% +42.6806% +40.0666% +0%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 11262 11262 +2104 +1920 +1891 +1848 +0 +22.9744% +20.5523% +20.1793% +19.6303% +0%
SCP_Astral_500pg_3ms 1846 2600 2586 7448 7479 +5633 +4879 +4893 +31 +305.1463% +187.6538% +189.2111% +0.4162%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 10188 10193 +6319 +6038 +5419 +5388 +5 +163.1131% +145.3189% +113.5107% +112.1332% +0.0491%
SCP_Astral_MBR 24110 24991 24570 24544 28870 28870 +4760 +3879 +4300 +4326 +0 +19.7428% +15.5216% +17.5010% +17.6255% +0%
Seer_Astral_45 69584 90103 87204 87620 88560
Seer_Astral_single 56699 55793 55891 58025 58025 +1326 +2232 +2134 +0 +2.3387% +4.0005% +3.8181% +0%
YEAST_KO_Astral 66823 87888 87428 86498 84463
EWZ_2P_MBR_Exploris 55271 59611 59611 +4340 +0 +7.8522% +0%
EWZ_2P_MBR_Exploris_Human 48465 52005 52005 +3540 +0 +7.3042% +0%
EWZ_2P_MBR_Exploris_YeastHuman 51246 55877 55877 +4631 +0 +9.0368% +0%
MacCoss_Eclipse_Normalization_noNorm 73278 78120 78120 +4842 +0 +6.6077% +0%
MacCoss_Eclipse_Normalization_yesNorm 73278 78120 78120 +4842 +0 +6.6077% +0%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 630477
KEAP1KO_Eclipse 87920 92888 93982 93441 89619 90494 +2574 -2394 -3488 -2947 +875 +2.9277% -2.5773% -3.7113% -3.1539% +0.9764%
MTAC_3P_Alternating 63773 63974 63611 63015 65078 65362 +1589 +1388 +1751 +2347 +284 +2.4917% +2.1696% +2.7527% +3.7245% +0.4364%
MTAC_3P_Standard 64317 64464 64219 63385 65667 65830 +1513 +1366 +1611 +2445 +163 +2.3524% +2.1190% +2.5086% +3.8574% +0.2482%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12564 12568 +501 +598 +628 +4 +4.1518% +4.9958% +5.2596% +0.0318%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12801 12803 +371 +332 +441 +475 +2 +2.9842% +2.6622% +3.5674% +3.8530% +0.0156%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12487 12496 +488 +449 +536 +528 +9 +4.0640% +3.7271% +4.4816% +4.4118% +0.0721%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12856 12885 +324 +420 +408 +475 +29 +2.5794% +3.3694% +3.2700% +3.8276% +0.2256%
Olsen_Astral_3P 236395 245756 242430 240719 237342
Olsen_Exploris_3P 146224 153534 153990 155827 155394 155881 +9657 +2347 +1891 +54 +487 +6.6043% +1.5287% +1.2280% +0.0347% +0.3134%
SCIEX_3P 70810 74366 72157 71550 73172
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10883 10793 +1630 +1265 +1208 +1459 -90 +17.7889% +13.2767% +12.6030% +15.6310% -0.8270%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 10595 10577 +1279 +816 +1165 +1024 -18 +13.7556% +8.3598% +12.3778% +10.7191% -0.1699%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 8821 8701 +6251 +2617 +2454 +2585 -120 +255.1429% +43.0145% +39.2829% +42.2662% -1.3604%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6131 6110 +1407 +1522 +1152 +1187 -21 +29.9171% +33.1735% +23.2352% +24.1113% -0.3425%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16853 16830 +640 +550 +805 +775 -23 +3.9531% +3.3784% +5.0234% +4.8272% -0.1365%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14483 14478 +879 +637 +790 +807 -5 +6.4637% +4.6023% +5.7715% +5.9030% -0.0345%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16887 16836 +584 +560 +719 +911 -51 +3.5934% +3.4406% +4.4611% +5.7206% -0.3020%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17617 17647 +630 +469 +734 +902 +30 +3.7022% +2.7302% +4.3399% +5.3867% +0.1703%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 4941 4752 +1105 +839 +888 +1213 -189 +30.2989% +21.4413% +22.9814% +34.2752% -3.8251%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5427 5371 +1071 +768 +574 +394 -56 +24.9070% +16.6848% +11.9658% +7.9164% -1.0319%
SCP_Astral_250pg_3ms 576 22 936 741 2680 2649 +2073 +2627 +1713 +1908 -31 +359.8958% +11940.9091% +183.0128% +257.4899% -1.1567%
SCP_Astral_250pg_6ms 637 2080 2029 2046 3771 3823 +3186 +1743 +1794 +1777 +52 +500.1570% +83.7981% +88.4179% +86.8524% +1.3789%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7435 7430 +1185 +1084 +1414 +1303 -5 +18.9752% +17.0816% +23.5040% +21.2665% -0.0672%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7593 7542 +820 +813 +530 +519 -51 +12.1988% +12.0820% +7.5585% +7.3900% -0.6717%
SCP_Astral_500pg_3ms 982 2365 2177 4719 4767 +3785 +2402 +2590 +48 +385.4379% +101.5645% +118.9711% +1.0172%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 6659 6597 +2889 +2590 +2552 +2679 -62 +77.9126% +64.6369% +63.0902% +68.3767% -0.9311%
SCP_Astral_MBR 20165 20129 20074 19793 20378 20313 +148 +184 +239 +520 -65 +0.7339% +0.9141% +1.1906% +2.6272% -0.3190%
Seer_Astral_45 225377 241455 241952 237727 233526
Seer_Astral_single 4685 4700 4632 4849 4849 +164 +149 +217 +0 +3.5005% +3.1702% +4.6848% +0%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1339502
EWZ_2P_MBR_Exploris 245259 244802 245653 +394 +851 +0.1606% +0.3476%
EWZ_2P_MBR_Exploris_Human 115447 114079 114178 -1269 +99 -1.0992% +0.0868%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130613 130705 +1737 +92 +1.3468% +0.0704%
MacCoss_Eclipse_Normalization_noNorm 178174 187043 188229 +10055 +1186 +5.6434% +0.6341%
MacCoss_Eclipse_Normalization_yesNorm 178174 187043 188229 +10055 +1186 +5.6434% +0.6341%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6583
KEAP1KO_Eclipse 7845 8175 8155 8203 8224 8236 +391 +61 +81 +33 +12 +4.9841% +0.7462% +0.9933% +0.4023% +0.1459%
MTAC_3P_Alternating 11361 11494 11351 11338 11831 11819 +458 +325 +468 +481 -12 +4.0313% +2.8276% +4.1230% +4.2424% -0.1014%
MTAC_3P_Standard 11473 11560 11477 11396 12025 12011 +538 +451 +534 +615 -14 +4.6893% +3.9014% +4.6528% +5.3966% -0.1164%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4354 4342 +214 +250 +242 -12 +5.1841% +6.1095% +5.9024% -0.2756%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4404 4403 +188 +155 +185 +189 -1 +4.4603% +3.6488% +4.3860% +4.4850% -0.0227%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4321 4310 +235 +176 +220 +213 -11 +5.7669% +4.2574% +5.3790% +5.1989% -0.2546%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4397 4408 +159 +171 +164 +177 +11 +3.7421% +4.0359% +3.8643% +4.1834% +0.2502%
Olsen_Astral_3P 13820 14378 14293 14296 14381
Olsen_Exploris_3P 7255 7582 7340 7479 7744 7730 +475 +148 +390 +251 -14 +6.5472% +1.9520% +5.3134% +3.3561% -0.1808%
SCIEX_3P 8652 9109 8679 8618 9355
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3916 3872 +627 +483 +461 +554 -44 +19.3220% +14.2520% +13.5151% +16.6968% -1.1236%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3764 3749 +495 +316 +458 +315 -15 +15.2120% +9.2048% +13.9167% +9.1730% -0.3985%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3262 3209 +759 +813 +759 +812 -53 +30.9796% +33.9316% +30.9796% +33.8757% -1.6248%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3259 3248 +740 +812 +614 +606 -11 +29.5056% +33.3333% +23.3106% +22.9372% -0.3375%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5846 5835 +256 +179 +331 +289 -11 +4.5886% +3.1648% +6.0138% +5.2110% -0.1882%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5069 5068 +347 +230 +285 +257 -1 +7.3501% +4.7540% +5.9586% +5.3419% -0.0197%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5893 5863 +252 +208 +267 +310 -30 +4.4912% +3.6782% +4.7713% +5.5826% -0.5091%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6105 6119 +273 +170 +276 +314 +14 +4.6699% +2.8576% +4.7236% +5.4091% +0.2293%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1855 1767 +475 +343 +361 +479 -88 +36.7647% +24.0871% +25.6757% +37.1894% -4.7439%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1982 1958 +390 +298 +200 +85 -24 +24.8724% +17.9518% +11.3766% +4.5382% -1.2109%
SCP_Astral_250pg_3ms 307 8 350 283 1112 1081 +774 +1073 +731 +798 -31 +252.1173% +13412.5000% +208.8571% +281.9788% -2.7878%
SCP_Astral_250pg_6ms 637 756 751 766 1449 1450 +813 +694 +699 +684 +1 +127.6295% +91.7989% +93.0759% +89.2950% +0.0690%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2723 2694 +487 +419 +525 +464 -29 +22.0662% +18.4176% +24.2047% +20.8072% -1.0650%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2749 2729 +326 +341 +252 +190 -20 +13.5664% +14.2797% +10.1736% +7.4833% -0.7275%
SCP_Astral_500pg_3ms 525 902 828 1832 1837 +1312 +935 +1009 +5 +249.9048% +103.6585% +121.8599% +0.2729%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2446 2415 +1097 +968 +929 +980 -31 +83.2322% +66.8970% +62.5168% +68.2927% -1.2674%
SCP_Astral_MBR 4708 4720 4712 4715 4934 4901 +193 +181 +189 +186 -33 +4.0994% +3.8347% +4.0110% +3.9449% -0.6688%
Seer_Astral_45 5802 6297 6122 6133 6123
Seer_Astral_single 4685 4700 4632 4849 4849 +164 +149 +217 +0 +3.5005% +3.1702% +4.6848% +0%
YEAST_KO_Astral 4565 4795 4676 4673 4730
EWZ_2P_MBR_Exploris 7041 7029 7046 +5 +17 +0.0710% +0.2419%
EWZ_2P_MBR_Exploris_Human 6167 6076 6068 -99 -8 -1.6053% -0.1317%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6956 6940 +53 -16 +0.7696% -0.2300%
MacCoss_Eclipse_Normalization_noNorm 5804 6128 6132 +328 +4 +5.6513% +0.0653%
MacCoss_Eclipse_Normalization_yesNorm 5804 6128 6132 +328 +4 +5.6513% +0.0653%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 630467
KEAP1KO_Eclipse 89599 90475 +876
MTAC_3P_Alternating 65077 65357 +280
MTAC_3P_Standard 65657 65825 +168
MTAC_Yeast_Alternating_3min 12558 12562 +4
MTAC_Yeast_Alternating_5min 12789 12797 +8
MTAC_Yeast_Standard_3min 12476 12487 +11
MTAC_Yeast_Standard_5min 12851 12881 +30
Olsen_Astral_3P 237315
Olsen_Exploris_3P 155392 155879 +487
SCIEX_3P 73165
SCP_Astral_1000pg_12ms 10883 10793 -90
SCP_Astral_1000pg_24ms 10595 10577 -18
SCP_Astral_1000pg_3ms 8821 8701 -120
SCP_Astral_1000pg_6ms 6125 6102 -23
SCP_Astral_10ng_12ms 16852 16829 -23
SCP_Astral_10ng_24ms 14483 14478 -5
SCP_Astral_10ng_3ms 16884 16832 -52
SCP_Astral_10ng_6ms 17617 17647 +30
SCP_Astral_250pg_12ms 4939 4750 -189
SCP_Astral_250pg_24ms 5427 5371 -56
SCP_Astral_250pg_3ms 2680 2649 -31
SCP_Astral_250pg_6ms 3771 3823 +52
SCP_Astral_500pg_12ms 7435 7430 -5
SCP_Astral_500pg_24ms 7593 7542 -51
SCP_Astral_500pg_3ms 4719 4767 +48
SCP_Astral_500pg_6ms 6659 6597 -62
SCP_Astral_MBR 20378 20313 -65
Seer_Astral_45 233525
Seer_Astral_single 4849 4849 +0
YEAST_KO_Astral 1339497
EWZ_2P_MBR_Exploris 244790 245640 +850
EWZ_2P_MBR_Exploris_Human 114069 114169 +100
EWZ_2P_MBR_Exploris_YeastHuman 130608 130700 +92
MacCoss_Eclipse_Normalization_noNorm 187042 188228 +1186
MacCoss_Eclipse_Normalization_yesNorm 187042 188228 +1186

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0015 -0.0015 -0.0004 +0
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0008 -0.0008 -0.0002 +0
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0013 -0.0013 -0.0008 -0.0012 -0.0003 -0.0006 -0.0000
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0016 -0.0016 -0.0002 -0.0020 -0.0010 -0.0009 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0019 -0.0019 -0.0004 +0.0000 +0.0007 +0
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0010 -0.0010 -0.0006 +0.0003 +0.0004 +0.0005 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0020 -0.0001 -0.0006 -0.0008 +0.0000 +0
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0011 -0.0011 -0.0000 +0.0009 +0.0013 +0
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0008 -0.0008 -0.0014 +0
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0004 0.0004 +0.0006 +0.0002 +0.0015 -0.0000 +0
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0031 -0.0031 -0.0008 -0.0001 +0
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0000 -0.0000 +0.0054 +0.0033 +0.0032 +0.0046 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0017 0.0017 +0.0047 +0.0064 +0.0046 +0.0055 -0.0000
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0021 -0.0021 -0.0019 -0.0010 +0.0015 +0.0005 +0
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0016 -0.0016 +0.0006 +0.0001 +0.0008 -0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0019 -0.0019 +0.0002 -0.0027 -0.0004 -0.0006 +0
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0010 -0.0010 +0.0014 +0.0017 +0.0008 +0.0008 +0
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0011 -0.0011 -0.0003 -0.0012 +0.0010 +0.0001 +0
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0015 0.0015 +0.0054 +0.0056 +0.0012 +0.0067 +0
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0021 -0.0021 -0.0019 -0.0010 +0.0002 +0.0010 +0
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 -0.0011 -0.0012 +0.0057 -0.0012 -0.0000
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0019 -0.0019 +0.0032 +0.0007 +0.0030 -0.0000
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0032 -0.0032 -0.0010 -0.0022 -0.0004 -0.0006 +0
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0017 0.0017 +0.0030 +0.0041 +0.0029 +0.0028 -0.0000
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0011 0.0011 +0.0024 +0.0034 +0.0046 -0.0000
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0004 0.0004 +0.0035 +0.0037 +0.0019 -0.0000
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 -0.0009 +0.0017 +0.0010 +0.0005 +0.0013 +0
Seer_Astral_45_Entrapment -0.0023 -0.0008
Seer_Astral_single_Entrapment -0.0022 -0.0001 -0.0001 +0.0021 +0
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0024
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0015 -0.0013 +0.0013 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0046 -0.0046 -0.0017 -0.0000
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0037 -0.0040 -0.0030 -0.0029 -0.0045 -0.0047 -0.0003
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0044 -0.0047 -0.0034 -0.0022 -0.0018 -0.0021 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0040 +0.0025 +0.0012 +0.0008 -0.0012
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 0.0007 -0.0002 +0.0039 +0.0036 +0.0046 +0.0031 -0.0009
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0052 -0.0050 +0.0008 -0.0003 -0.0030 -0.0022 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0009 -0.0005 +0.0031 +0.0041 +0.0051 +0.0005
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0042 -0.0042 -0.0039 -0.0000
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0031
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0022 +0.0007 -0.0021 +0.0006 -0.0014 -0.0005
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0041
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0032 -0.0035 +0.0014 +0.0007 +0.0007 -0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 0.0033 0.0018 +0.0088 +0.0076 +0.0088 +0.0088 -0.0015
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0004 0.0021 +0.0080 +0.0080 +0.0093 +0.0093 +0.0017
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0025 -0.0021 -0.0003 +0.0028 +0.0022 +0.0024 +0.0004
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0066 -0.0068 -0.0014 -0.0028 -0.0014 -0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0032 -0.0038 -0.0006 -0.0015 -0.0022 +0.0007 -0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0021 -0.0026 +0.0010 +0.0047 +0.0040 +0.0034 -0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0038 +0.0017 -0.0018 +0.0016 +0.0009 -0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0041 0.0035 +0.0088 +0.0111 +0.0069 +0.0098 -0.0006
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0024 -0.0012 +0.0029 +0.0030 +0.0014 +0.0001 +0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0053 -0.0062 -0.0035 -0.0062 +0.0023 -0.0062 -0.0115
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0000 -0.0000 +0.0099 +0.0067 +0.0084 +0.0088 -0.0000
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0017 0.0013 +0.0048 +0.0052 -0.0002 +0.0033 -0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0013 -0.0022 -0.0002 -0.0021 +0.0029 +0.0039 -0.0009
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0031 0.0032 +0.0073 -0.0039 +0.0012 +0.0033 +0.0000
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0000 0.0005 +0.0050 +0.0050 +0.0013 +0.0061 +0.0005
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0028 -0.0033 +0.0026 -0.0003 -0.0008 +0.0017 -0.0005
Seer_Astral_45_Entrapment -0.0049 -0.0047
Seer_Astral_single_Entrapment -0.0074 -0.0000 -0.0000 +0.0074 +0
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0004
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0009 -0.0011 +0.0002 -0.0002
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0006 -0.0007 -0.0005 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0007 -0.0008 -0.0006 -0.0010 -0.0006 -0.0007 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0009 +0.0000 -0.0011 -0.0005 -0.0005 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0013 -0.0016 -0.0006 -0.0003 -0.0001 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0010 -0.0006 -0.0003 -0.0001 -0.0002 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0014 -0.0015 -0.0006 -0.0007 -0.0007 -0.0004 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0009 -0.0009 -0.0001 +0.0001 +0.0006 -0.0000
MacCoss_Eclipse_Normalization_Entrapment 0.0002 -0.0001 -0.0003 -0.0006 -0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0006
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0003 0.0004 +0.0008 -0.0001 +0.0010 +0.0004 +0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0022 -0.0025 -0.0010 +0.0005 -0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0003 -0.0006 +0.0040 +0.0022 +0.0025 +0.0031 -0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 0.0017 0.0015 +0.0035 +0.0044 +0.0041 +0.0041 -0.0002
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0013 -0.0013 -0.0015 -0.0008 +0.0014 +0.0010 -0.0001
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0012 -0.0015 +0.0002 -0.0005 +0.0001 -0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0013 -0.0015 -0.0002 -0.0019 -0.0003 -0.0007 -0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0008 -0.0011 +0.0009 +0.0010 +0.0005 +0.0004 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0012 -0.0015 -0.0010 -0.0017 -0.0003 -0.0006 -0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0020 0.0024 +0.0054 +0.0051 +0.0027 +0.0056 +0.0004
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0012 -0.0015 -0.0007 -0.0006 -0.0001 -0.0001 -0.0002
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0006 0.0007 +0.0066 +0.0007 +0.0001
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0000 -0.0001 +0.0036 +0.0020 +0.0029 -0.0001
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0010 -0.0012 +0.0006 -0.0009 +0.0008 +0.0001 -0.0002
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0014 0.0012 +0.0028 +0.0029 +0.0029 +0.0028 -0.0003
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0007 0.0008 -0.0011 +0.0011 +0.0023 +0.0001
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0011 0.0010 +0.0035 +0.0029 +0.0020 -0.0001
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0003 -0.0003 +0.0014 +0.0012 +0.0005 +0.0010 +0.0000
Seer_Astral_45_Entrapment -0.0011 -0.0003
Seer_Astral_single_Entrapment -0.0022 -0.0001 -0.0001 +0.0021 +0
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0016
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0002 -0.0002 +0.0010 +0.0000
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0026 -0.0025 -0.0009 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0019 -0.0018 -0.0017 -0.0016 -0.0021 -0.0021 +0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0019 -0.0020 -0.0011 -0.0006 +0.0001 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0003 -0.0010 +0.0026 +0.0024 +0.0020 -0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 0.0005 -0.0002 +0.0036 +0.0020 +0.0023 +0.0012 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0028 -0.0028 +0.0010 +0.0007 -0.0014 -0.0013 -0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0014 -0.0010 +0.0013 +0.0017 +0.0027 +0.0004
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0019 -0.0014 +0.0003
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0018
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0015 -0.0017 +0.0009 -0.0023 -0.0000 -0.0001 -0.0003
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0023
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0021 -0.0019 +0.0018 +0.0004 +0.0013 +0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 0.0013 0.0011 +0.0059 +0.0066 +0.0068 +0.0054 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0010 0.0008 +0.0052 +0.0041 +0.0049 +0.0039 -0.0002
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0022 -0.0024 +0.0000 +0.0011 +0.0016 +0.0016 -0.0002
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0047 +0.0000 -0.0016 -0.0005 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0031 -0.0037 -0.0005 -0.0023 -0.0022 -0.0011 -0.0005
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0023 -0.0023 -0.0001 +0.0023 +0.0015 +0.0010 +0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0026 +0.0012 -0.0007 +0.0012 +0.0003 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0039 0.0037 +0.0075 +0.0078 +0.0056 +0.0067 -0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0018 -0.0009 +0.0004 +0.0023 -0.0006 -0.0008 +0.0009
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0014 -0.0044 +0.0017 +0.0038 +0.0003 -0.0044 -0.0058
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0016 -0.0019 +0.0081 +0.0050 +0.0036 +0.0029 -0.0003
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0023 0.0020 +0.0059 +0.0055 +0.0027 +0.0047 -0.0003
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0013 -0.0024 -0.0005 -0.0025 +0.0019 +0.0020 -0.0011
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0021 0.0022 +0.0054 -0.0045 -0.0006 +0.0018 +0.0000
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0007 -0.0003 +0.0016 +0.0019 -0.0012 +0.0025 +0.0003
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0027 -0.0031 -0.0008 -0.0014 -0.0009 -0.0003 -0.0004
Seer_Astral_45_Entrapment -0.0029 -0.0010
Seer_Astral_single_Entrapment -0.0074 -0.0000 -0.0000 +0.0074 +0
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 2195 16649 -7746 +14454

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -19 693 -78 +712

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0416 +0.0100 +0.0416

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 110 770 -74 +660

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -8 41 -149 +49

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0.0532 -0.1719 +0.0532

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 1 +1 +2 +0 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 14 14 +4 +1 +1 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 11 +4 +0 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 12 14 +3 +0 +1 -2 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 0 0 +0 +1 +0 -2 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 0 0 +0 +1 +0 -2 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 0 +0 +1 -1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1634 0.1686 +0.0227 +0.0265 +0.0286 +0.0312 +0.0051
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1552 0.1603 +0.0210 +0.0241 +0.0252 +0.0279 +0.0051
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1576 0.1613 +0.0158 +0.0189 +0.0206 +0.0038
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1474 0.1493 -0.0037 +0.0084 +0.0117 +0.0137 +0.0020
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1685 0.1728 +0.0030 +0.0088 +0.0112 +0.0128 +0.0042
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1445 0.1469 -0.0034 +0.0103 +0.0132 +0.0147 +0.0024
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1549 +0.0069 +0.0049 +0.0053 +0.0044 +0.0017
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1536
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5931 0.5953 +0.0084 +0.0022
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2012 0.2014 +0.0297 +0.0002

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0841 0.0858 +0.0095 +0.0119 +0.0131 +0.0137 +0.0017
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0803 0.0808 +0.0085 +0.0105 +0.0109 +0.0120 +0.0005
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0737 0.0738 +0.0065 +0.0077 +0.0079 +0.0001
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0649 0.0646 -0.0132 +0.0043 +0.0054 +0.0058 -0.0003
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0787 0.0794 +0.0002 +0.0038 +0.0041 +0.0022 +0.0007
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0632 0.0631 -0.0140 +0.0064 +0.0062 +0.0062 -0.0001
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0470
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0987 0.0991 -0.0037 -0.0028 -0.0045 -0.0036 +0.0004
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1012
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5808 0.5809 -0.0072 +0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1362 0.1273 +0.0040 -0.0088

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0035 0.0046 -0.0020 +0.0070 +0.0012 -0.0742 +0.0012
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0146 -0.0152 -0.0076 +0.0055 -0.0002 -0.0262 +0.0006
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0075 -0.0108 +0.0007 -0.0023 -0.0001 +0.0066 +0.0034
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0726 -0.0668 +0.0012 -0.0008 +0.0020 -0.0543 -0.0058
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0707 -0.0710 -0.0054 -0.0006 -0.0003 -0.0015 +0.0003
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0577 -0.0622 -0.0080 +0.0050 -0.0016 +0.0286 +0.0046
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0481 +0.0114 +0.0329 -0.0052 -0.0480
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1834 +0.0115 +0.0151 +0.0011 -0.0457
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1791 -0.0082 +0.0282 -0.0195 +0.1593
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0329 +0.0067 +0.0305 +0.0014 -0.0093
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3275 +0.0081 +0.0093 -0.0002 -0.0154
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1236 -0.0024 -0.0402 -0.0016 +0.0901
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1225 +0.0108 -0.0145 +0.0012 +0.0495
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2185 +0.0015 +0.0038 -0.0038 -0.0093
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2388 +0.0262 -0.0191 +0.0011 +0.0365
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1347 0.1343 -0.0059 -0.0059 +0.0211 -0.1017 -0.0004
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0842 -0.0836 +0.0062 +0.0047 -0.0191 +0.0237 -0.0007
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2015 0.2073 +0.0183 -0.0240 +0.0287 -0.0770 +0.0058
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1038 0.1043 +0.0048 -0.0054 -0.0067 +0.0156 +0.0005
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0483 +0.0009 +0.0001 -0.0089 +0.0026 +0.0001
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2149 0.2158 +0.0051 -0.0017 +0.0004 +0.0113 +0.0009
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1482 0.1462 -0.0032 -0.0062 -0.0160 +0.1258 -0.0021
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0795 -0.0798 +0.0043 -0.0045 -0.0054 -0.0225 +0.0003
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0442 0.0477 +0.0169 -0.0238 +0.0355 -0.0523 +0.0035
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0335 +0.0195 +0.0041 +0.0006 -0.0438
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 0.0007 -0.0031 +0.0125 +0.0006 -0.0674
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0303 -0.0051 -0.0071 +0.0012 +0.0267
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0765 +0.0119 -0.0026 -0.0002 +0.0340
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0248
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0149 -0.0331 +0.0073 +0.0004 -0.0081
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0564
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1523 -0.0356 -0.0145 +0.0024 +0.0936
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1005 -0.0468 -0.0064 -0.0010 +0.0637

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0080 0.0163 +0.0009 +0.0076 -0.0005 -0.0653 +0.0083
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0148 -0.0158 -0.0089 +0.0045 +0.0004 -0.0263 +0.0010
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0007 -0.0063 +0.0054 -0.0044 +0.0010 -0.0029 +0.0056
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0693 -0.0587 +0.0013 +0.0005 -0.0055 -0.0513 -0.0106
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0694 -0.0690 -0.0060 -0.0005 -0.0005 -0.0007 -0.0004
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0546 -0.0606 -0.0084 +0.0078 -0.0007 +0.0236 +0.0060
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0517 +0.0142 +0.0365 -0.0057 -0.0387
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1335 +0.0050 +0.0043 -0.0072 -0.0299
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1920 -0.0338 -0.0246 +0.0154 +0.1748
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0269 +0.0064 +0.0290 +0.0021 -0.0255
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3006 +0.0072 +0.0066 -0.0010 -0.0050
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1154 +0.0002 -0.0402 -0.0012 +0.0866
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1070 +0.0124 -0.0135 -0.0021 +0.0560
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1976 -0.0003 +0.0009 -0.0042 +0.0019
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2026 +0.0289 -0.0188 +0.0012 +0.0223
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1578 0.1611 -0.0077 -0.0028 +0.0144 -0.0633 +0.0033
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0767 -0.0769 +0.0048 +0.0016 -0.0170 +0.0210 +0.0002
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2340 0.2423 +0.0504 -0.0481 +0.0073 -0.0314 +0.0083
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.1002 0.1001 +0.0031 -0.0032 -0.0081 +0.0243 -0.0002
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0438 -0.0436 +0.0011 -0.0008 -0.0084 +0.0017 -0.0002
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2253 0.2268 +0.0036 -0.0008 +0.0016 +0.0220 +0.0015
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1313 0.1238 +0.0005 -0.0096 -0.0297 +0.1267 -0.0075
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0800 -0.0795 +0.0056 -0.0034 -0.0033 -0.0285 -0.0005
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0598 0.0599 +0.0405 -0.0089 +0.0322 -0.0574 +0.0001
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0499 +0.0258 +0.0029 -0.0003 -0.0201
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0205 -0.0049 +0.0142 +0.0054 -0.0473
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0264 -0.0001 -0.0108 +0.0000 +0.0223
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0819 +0.0137 -0.0048 +0.0001 +0.0412
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0977 -0.0232 +0.0027 +0.0012 +0.0352
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0176 -0.0350 +0.0076 +0.0002 -0.0041
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0664 +0.0131 -0.0109 +0.0003 +0.0548
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1598 -0.0435 -0.0160 +0.0023 +0.1020
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0931 -0.0508 -0.0078 +0.0009 +0.0488

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1258 0.1497 +0.0343 +0.0202 -0.0086 -0.1820 +0.0239
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1101 0.1268 +0.0169 -0.0058 +0.0004 -0.0998 +0.0167
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1125 0.1331 +0.0117 -0.0078 +0.0011 -0.1483 +0.0206
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1308 0.1572 +0.0441 -0.0007 -0.0136 -0.1672 +0.0264
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1234 0.1378 +0.0164 -0.0031 -0.0002 -0.0959 +0.0144
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1269 0.1455 +0.0170 -0.0063 +0.0017 -0.1411 +0.0186
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1721 +0.0354 +0.0384 -0.0420 -0.4036
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2153 +0.0422 -0.0321 -0.0167 -0.1348
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3083 +0.2175 -0.0279 -0.1166 -0.9328
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1373 +0.0427 +0.0074 -0.0036 -0.1191
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2297 +0.0473 +0.0030 -0.0078 -0.1059
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1773 +0.0549 +0.0262 -0.0056 -0.2028
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1390 +0.0358 +0.0129 -0.0110 -0.1925
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1927 +0.0274 +0.0045 -0.0018 -0.0927
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1932 +0.0778 +0.0001 -0.0169 -0.3452
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.2070 0.2153 +0.0445 +0.0761 -0.1281 -0.3638 +0.0082
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0477 0.0535 -0.0103 +0.0134 -0.0147 -0.1035 +0.0058
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2703 0.3413 -0.0030 +0.1483 +0.0078 -0.6872 +0.0710
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1850 0.1969 +0.0037 +0.0045 +0.0051 -0.1654 +0.0119
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0420 0.0473 +0.0676 -0.0087 -0.0168 -0.1098 +0.0054
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1833 0.1947 +0.0316 +0.0062 -0.0049 -0.1521 +0.0114
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2082 0.2375 -0.0093 +0.0378 -0.0706 -0.3686 +0.0293
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0563 0.0625 +0.0977 -0.0155 +0.0159 -0.1915 +0.0062
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3837 0.5561 +0.0737 +0.1982 -0.0827 -0.8914 +0.1724
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1070 +0.0321 -0.0450 -0.0051 -0.3757
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1330 +0.0200 -0.0293 -0.0344 -0.4089
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0731 +0.0068 -0.0387 -0.0080 -0.0336
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0861 +0.0190 -0.0584 -0.0028 -0.0659
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0956 +0.0281 -0.0478 -0.0031 -0.0987
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0875 +0.0273 -0.0601 -0.0037 -0.0465
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0890 +0.0130 -0.0614 -0.0008 -0.0959
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1480 +0.0619 -0.0455 -0.0143 -0.4260
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1024 +0.0688 -0.0494 -0.0103 -0.3948

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0673 0.0700 +0.0149 -0.0182 -0.0054 -0.0534 +0.0027
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0360 0.0395 +0.0035 +0.0005 +0.0043 -0.0455 +0.0035
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0437 0.0533 -0.0157 -0.0104 +0.0083 -0.0685 +0.0096
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0471 0.0490 -0.0042 +0.0002 -0.0084 -0.0725 +0.0019
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0368 0.0387 +0.0032 -0.0030 +0.0035 -0.0348 +0.0019
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0486 0.0550 +0.0000 +0.0073 -0.0081 -0.0769 +0.0064
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0796 +0.0402 -0.0136 +0.0467 -0.1860
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0780 +0.0316 -0.0208 -0.0112 -0.0306
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1184 +0.1306 -0.0136 -0.0647 -0.2744
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0243 +0.0032 +0.0034 -0.0021 -0.0222
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0441 +0.0110 -0.0047 +0.0013 -0.0184
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0244 +0.0055 -0.0000 +0.0038 -0.0376
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0277 +0.0026 +0.0079 -0.0036 -0.0354
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0098
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0353 +0.0296 -0.0022 -0.0025 -0.0855
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0517 0.0538 +0.0146 +0.0452 -0.0355 -0.1759 +0.0020
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0188 0.0206 -0.0057 -0.0062 -0.0031 -0.0297 +0.0018
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0643 0.0945 -0.1294 +0.1626 +0.0090 -0.4363 +0.0302
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0327 0.0335 -0.0046 +0.0074 +0.0016 -0.0363 +0.0008
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0095 0.0098 +0.0109 -0.0066 +0.0090 -0.0338 +0.0002
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0368 0.0374 -0.0053 +0.0093 +0.0025 -0.0455 +0.0006
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0636 0.0635 -0.0166 +0.0170 -0.0166 -0.1538 -0.0001
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0207 0.0211 +0.0068 -0.0006 -0.0039 -0.0531 +0.0004
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1671 0.1717 -0.0891 -0.0032 -0.0082 -0.2633 +0.0046
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0496 +0.0682 -0.0593 -0.0056 -0.1728
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0620 +0.0668 -0.0849 -0.0031 -0.1815
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0330 +0.0113 -0.0357 +0.0198 -0.0198
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0246 -0.0054 -0.0154 +0.0040 -0.0242
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0269 -0.0011 -0.0225 +0.0112 -0.0339
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0236 +0.0094 -0.0181 -0.0013 -0.0221
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0373 -0.0134 -0.0199 -0.0090 -0.0302
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0432 +0.0271 -0.0671 +0.0055 -0.2161
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0427 +0.0501 -0.0498 +0.0220 -0.2327

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 119.5600
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 16.0500 12.9700 -11.1000 -4.3500 -6.9000 -4.1600 -3.0800 -46.1155% -25.1155% -34.7257% -24.2849% -19.1900%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.6100 7.9400 -4.8100 -1.1300 -0.4200 -1.3500 -0.6700 -37.7255% -12.4587% -5.0239% -14.5318% -7.7816%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.7400 7.2300 -5.0800 -1.7300 -2.4300 -3.5800 -0.5100 -41.2673% -19.3080% -25.1553% -33.1175% -6.5891%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.1100 4.3600 +0.1300 -0.0500 -0.5800 +0.2500 +3.0733% -1.1338% -11.7409% +6.0827%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.2700 4.6500 -0.7300 +0.2700 -0.1000 +0.1100 +0.3800 -13.5688% +6.1644% -2.1053% +2.4229% +8.8993%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.1000 4.4000 -1.0300 +0.2600 -0.0400 -0.2600 +0.3000 -18.9687% +6.2802% -0.9009% -5.5794% +7.3171%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5600 4.7700 -0.7800 +0.3500 +0.2400 +0.3100 +0.2100 -14.0541% +7.9186% +5.2980% +6.9507% +4.6053%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 21.8200
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 14.0700 13.5900 -14.0700 -6.1700 -4.7300 -5.6900 -0.4800 -50.8677% -31.2247% -25.8188% -29.5124% -3.4115%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 10.2600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3400 4.3000 -1.4900 -0.2900 -0.3500 +0.2100 -0.0400 -25.7340% -6.3181% -7.5269% +5.1345% -0.9217%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 4.6300 4.8000 -1.4600 +0.4000 -1.0800 +0.1700 -23.3227% +9.0909% -18.3673% +3.6717%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.4000 4.4600 -0.0600 +0.7300 -0.3400 +0.8200 +0.0600 -1.3274% +19.5710% -7.0833% +22.5275% +1.3636%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.1600 3.7900 -1.9500 +0.2800 -0.1300 +0.3500 -0.3700 -33.9721% +7.9772% -3.3163% +10.1744% -8.8942%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4300 5.1500 -1.9200 -0.3800 -0.3600 -0.5900 -0.2800 -27.1570% -6.8716% -6.5336% -10.2787% -5.1565%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.5500 6 -1.5900 +0.2700 -0.1400 +0.4600 +0.4500 -20.9486% +4.7120% -2.2801% +8.3032% +8.1081%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2300 4.8600 -1.5900 +0.1900 +0.5600 +0.4500 -0.3700 -24.6512% +4.0685% +13.0233% +10.2041% -7.0746%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.8800 5.3800 -2 +0.4500 +0.7500 -0.2400 +0.5000 -27.1003% +9.1278% +16.1987% -4.2705% +10.2459%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.3600 4.0400 -0.7000 +0.3800 +0.6500 -0.3200 -14.7679% +10.3825% +19.1740% -7.3394%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.3300 4.8800 -0.3800 +1.0400 +1.1200 +0.5500 -7.2243% +27.0833% +29.7872% +12.7021%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 4 3.7300 -0.9200 +0.3000 +0.0200 +0.2800 -0.2700 -19.7849% +8.7464% +0.5391% +8.1159% -6.7500%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.4700 4.4300 +0.2600 +1.1400 +0.7400 +1.1600 -0.0400 +6.2350% +34.6505% +20.0542% +35.4740% -0.8949%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2000 4.1100 -1.1700 +0.5800 +0.5100 +0.6200 -0.0900 -22.1591% +16.4306% +14.1667% +17.7650% -2.1429%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.2900 4.3200 -1.1900 +0.5000 +0.1700 -0.4900 +0.0300 -21.5971% +13.0890% +4.0964% -10.1871% +0.6993%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.4000 4.3600 -0.3700 +0.9000 +0.7900 -0.0400 -7.8224% +26.0116% +22.1289% -0.9091%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.7000 4.7000 +0.0500 +1.0800 +0.9700 +0.9200 +0 +1.0753% +29.8343% +26.0054% +24.3386% +0%
SCP_Astral_MBR 9.0400 6.5500 6.1000 6.7300 6.1500 -2.8900 -0.4000 +0.0500 -0.5800 -31.9690% -6.1069% +0.8197% -8.6181%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 85.2100
Seer_Astral_single 4.4700 4.1400 5.5800 5.2300 5.0700 +0.6000 +0.9300 -0.5100 -0.1600 +13.4228% +22.4638% -9.1398% -3.0593%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 114.6600
EWZ_2P_MBR_Exploris 26.1800 20.0200 19.5900 -6.5900 -0.4300 -25.1719% -2.1479%
EWZ_2P_MBR_Exploris_Human 12.9100 11.2900 11.2000 -1.7100 -0.0900 -13.2455% -0.7972%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 12.3500 12.0100 -0.0500 -0.3400 -0.4146% -2.7530%
MacCoss_Eclipse_Normalization_noNorm 27.5100 26.9000 28.5200 +1.0100 +1.6200 +3.6714% +6.0223%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 27.3700 28.6700 +1 +1.3000 +3.6140% +4.7497%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png