Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1361351 +264857 +54346 +49396 +67810 +67810 +24.1549% +4.1581% +3.7651% +5.2422% +5.2422%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 650590 +64268 +34828 +39880 +50709 +50709 +10.9612% +5.6561% +6.5301% +8.4532% +8.4532%
MTAC_3P_Standard 596590 623022 617574 607435 607435 660437 +63847 +37415 +42863 +53002 +53002 +10.7020% +6.0054% +6.9405% +8.7255% +8.7255%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 145404 +7856 +8565 +9844 +9844 +5.7115% +6.2592% +7.2617% +7.2617%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 166898 +11257 +10347 +10389 +11863 +12054 +7.2327% +6.6093% +6.6380% +7.6518% +7.7846%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 147544 +9035 +8159 +8252 +9659 +9757 +6.5230% +5.8536% +5.9242% +7.0051% +7.0812%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 169225 +10263 +10493 +10065 +11303 +11303 +6.4563% +6.6105% +6.3238% +7.1573% +7.1573%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1232398 +209662 +77729 +108525 +48314 +48314 +20.5001% +6.7317% +9.6563% +4.0803% +4.0803%
SCIEX_3P 672242 749525 722698 714454 714454 748357 +76115 -1168 +25659 +33903 +33903 +11.3226% -0.1558% +3.5504% +4.7453% +4.7453%
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 45418 +4536 +3718 +2993 +3318 +3318 +11.0953% +8.9161% +7.0548% +7.8812% +7.8812%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 43699 +2630 +1297 +1676 +2547 +2547 +6.4039% +3.0588% +3.9883% +6.1892% +6.1892%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 24192 +15452 +1077 +1177 +1279 +1279 +176.7963% +4.6593% +5.1141% +5.5820% +5.5820%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 19609 +2674 +2056 +1200 +1261 +1261 +15.7898% +11.7131% +6.5186% +6.8727% +6.8727%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 102328 +2420 -563 +3345 +3680 +3680 +2.4222% -0.5472% +3.3794% +3.7304% +3.7304%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 73203 +2105 +475 +1758 +2077 +2077 +2.9607% +0.6531% +2.4606% +2.9202% +2.9202%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 119903 +4746 +2587 +5581 +6822 +6653 +4.1213% +2.2052% +4.8818% +6.0328% +5.8746%
SCP_Astral_10ng_ms 105704 106497 105622 104434 104512 111705 +6001 +5208 +6083 +7271 +7193 +5.6772% +4.8903% +5.7592% +6.9623% +6.8825%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 11730 +1536 +924 +492 +497 +497 +15.0677% +8.5508% +4.3780% +4.4245% +4.4245%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 16881 +2074 +1448 +840 +1182 +1182 +14.0069% +9.3825% +5.2366% +7.5291% +7.5291%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 2717 +1456 +685 +267 +331 +331 +115.4639% +33.7106% +10.8980% +13.8726% +13.8726%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 5848 +4412 +1065 +158 +117 +117 +307.2423% +22.2664% +2.7768% +2.0415% +2.0415%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 24418 +2708 +2523 +1838 +1955 +1955 +12.4735% +11.5232% +8.1399% +8.7032% +8.7032%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 27187 +1327 +1044 +927 +1562 +1562 +5.1315% +3.9934% +3.5301% +6.0956% +6.0956%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 7314 +3830 +416 +480 +480 +109.9311% +6.0307% +7.0237% +7.0237%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 13675 +2976 +2201 +793 +786 +786 +27.8157% +19.1825% +6.1559% +6.0982% +6.0982%
SCP_Astral_MBR 92167 93585 91884 90864 90838 95674 +3507 +2089 +3790 +4810 +4836 +3.8050% +2.2322% +4.1248% +5.2936% +5.3238%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 58577 +1878 +2784 +2686 +2686 +3.3122% +4.9899% +4.8058% +4.8058%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1845800 +69672 +70454 +3.9227% +3.9685%
EWZ_2P_MBR_Exploris_Human 836809 836809 867119 +30310 +30310 +3.6221% +3.6221%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 948619 +33695 +34670 +3.6828% +3.7934%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2156783 +78749 +78747 +3.7896% +3.7895%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2156783 +78749 +78747 +3.7896% +3.7895%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 134724 +23220 +1105 +3365 +2693 +2693 +20.8244% +0.8270% +2.5617% +2.0397% +2.0397%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 121770 +13503 +4418 +7111 +6954 +6954 +12.4719% +3.7647% +6.2019% +6.0566% +6.0566%
MTAC_3P_Standard 110265 118693 115800 116148 116148 123761 +13496 +5068 +7961 +7613 +7613 +12.2396% +4.2698% +6.8748% +6.5546% +6.5546%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 52147 +3289 +3115 +3152 +3152 +6.7318% +6.3530% +6.4333% +6.4333%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 59296 +5327 +4221 +3456 +3412 +3475 +9.8705% +7.6641% +6.1891% +6.1055% +6.2253%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 53136 +4515 +3471 +2847 +2676 +2721 +9.2861% +6.9888% +5.6613% +5.3032% +5.3972%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 60140 +5080 +4221 +3433 +3313 +3313 +9.2263% +7.5484% +6.0539% +5.8300% +5.8300%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 60922 +9650 +2138 +5875 +2329 +2357 +18.8212% +3.6370% +10.6727% +3.9749% +4.0246%
SCIEX_3P 82206 93920 87927 87858 87858 91142 +8936 -2778 +3215 +3284 +3284 +10.8703% -2.9578% +3.6564% +3.7378% +3.7378%
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 16733 +2293 +1775 +1484 +1026 +1026 +15.8795% +11.8666% +9.7318% +6.5321% +6.5321%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 15819 +1336 +754 +903 +749 +747 +9.2246% +5.0050% +6.0539% +4.9701% +4.9562%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 9927 +1187 +551 +538 +563 +542 +13.5812% +5.8767% +5.7301% +6.0124% +5.7752%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 10442 +1544 +1183 +658 +632 +632 +17.3522% +12.7768% +6.7253% +6.4424% +6.4424%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 35414 +549 -883 +1072 +989 +989 +1.5746% -2.4327% +3.1215% +2.8729% +2.8729%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 25890 +1241 +424 +771 +667 +667 +5.0347% +1.6650% +3.0694% +2.6444% +2.6444%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 42034 +1878 +489 +1991 +2141 +2088 +4.6768% +1.1770% +4.9722% +5.3669% +5.2271%
SCP_Astral_10ng_ms 36688 37676 37649 37421 37459 39914 +3226 +2238 +2265 +2493 +2455 +8.7931% +5.9401% +6.0161% +6.6620% +6.5538%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 4443 +777 +494 +234 +197 +197 +21.1948% +12.5095% +5.5595% +4.6397% +4.6397%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 6505 +1206 +894 +650 +439 +438 +22.7590% +15.9330% +11.1016% +7.2371% +7.2194%
SCP_Astral_250pg_3ms 675 721 908 879 879 1009 +334 +288 +101 +130 +130 +49.4815% +39.9445% +11.1233% +14.7895% +14.7895%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 2224 +788 +486 +79 +61 +59 +54.8747% +27.9632% +3.6830% +2.8202% +2.7252%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 9169 +1375 +1197 +917 +763 +761 +17.6418% +15.0151% +11.1125% +9.0768% +9.0509%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 10046 +888 +704 +675 +632 +631 +9.6964% +7.5359% +7.2031% +6.7134% +6.7021%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 2797 +951 +197 +211 +208 +51.5168% +7.5769% +8.1593% +8.0340%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 5137 +1263 +982 +363 +332 +333 +32.6020% +23.6342% +7.6037% +6.9095% +6.9317%
SCP_Astral_MBR 24110 24991 24570 24544 24527 25400 +1290 +409 +830 +856 +873 +5.3505% +1.6366% +3.3781% +3.4876% +3.5593%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 58577 +1878 +2784 +2686 +2686 +3.3122% +4.9899% +4.8058% +4.8058%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 56803 +1532 +1656 +2.7718% +3.0029%
EWZ_2P_MBR_Exploris_Human 48465 48473 49788 +1323 +1315 +2.7298% +2.7129%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 52649 +1403 +1472 +2.7378% +2.8763%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 75059 +1781 +1782 +2.4305% +2.4319%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 75059 +1781 +1782 +2.4305% +2.4319%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 96635 +8715 +3747 +2653 +3194 +2349 +9.9124% +4.0339% +2.8229% +3.4182% +2.4914%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 68769 +4996 +4795 +5158 +5754 +2934 +7.8340% +7.4952% +8.1087% +9.1312% +4.4566%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68810 +4493 +4346 +4591 +5425 +2843 +6.9857% +6.7417% +7.1490% +8.5588% +4.3097%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12571 +504 +601 +631 +332 +4.1767% +5.0209% +5.2848% +2.7126%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 12959 +527 +488 +597 +631 +299 +4.2391% +3.9131% +4.8293% +5.1184% +2.3618%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12452 +444 +405 +492 +484 +272 +3.6975% +3.3618% +4.1137% +4.0441% +2.2332%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13106 +545 +641 +629 +696 +332 +4.3388% +5.1424% +5.0413% +5.6084% +2.5990%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 162523 +16299 +8989 +8533 +6696 +5237 +11.1466% +5.8547% +5.5413% +4.2971% +3.3296%
SCIEX_3P 70810 74366 72157 71550 73429 75692 +4882 +1326 +3535 +4142 +2263 +6.8945% +1.7831% +4.8990% +5.7890% +3.0819%
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 10750 +1587 +1222 +1165 +1416 +728 +17.3197% +12.8254% +12.1544% +15.1703% +7.2640%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 10394 +1096 +633 +982 +841 +405 +11.7875% +6.4850% +10.4335% +8.8035% +4.0545%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 6377 +3927 +293 +130 +261 +28 +160.2857% +4.8159% +2.0810% +4.2675% +0.4410%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 5295 +592 +707 +337 +372 +346 +12.5877% +15.4098% +6.7971% +7.5564% +6.9913%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 16998 +808 +718 +973 +943 +462 +4.9907% +4.4103% +6.0718% +5.8736% +2.7939%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14373 +774 +532 +685 +702 +389 +5.6916% +3.8437% +5.0044% +5.1350% +2.7818%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 17955 +938 +777 +1042 +1210 +606 +5.5121% +4.5232% +6.1609% +7.2260% +3.4930%
SCP_Astral_10ng_ms 16252 16276 16117 15925 16458 17049 +797 +773 +932 +1124 +591 +4.9040% +4.7493% +5.7827% +7.0581% +3.5910%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 4056 +409 +143 +192 +517 +242 +11.2147% +3.6545% +4.9689% +14.6086% +6.3450%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5524 +1224 +921 +727 +547 +355 +28.4651% +20.0087% +15.1553% +10.9906% +6.8679%
SCP_Astral_250pg_3ms 576 22 936 741 736 1149 +573 +1127 +213 +408 +413 +99.4792% +5122.7273% +22.7564% +55.0607% +56.1141%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 2139 +1502 +59 +110 +93 +71 +235.7928% +2.8365% +5.4214% +4.5455% +3.4333%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 6981 +736 +635 +965 +854 +762 +11.7854% +10.0063% +16.0406% +13.9383% +12.2528%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7532 +810 +803 +520 +509 +190 +12.0500% +11.9334% +7.4159% +7.2476% +2.5879%
SCP_Astral_500pg_3ms 982 2365 2177 2236 2515 +1533 +150 +338 +279 +156.1100% +6.3425% +15.5260% +12.4776%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 4311 +603 +304 +266 +393 +208 +16.2621% +7.5867% +6.5760% +10.0306% +5.0695%
SCP_Astral_MBR 20165 20129 20074 19793 19898 20848 +683 +719 +774 +1055 +950 +3.3871% +3.5720% +3.8557% +5.3302% +4.7743%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4926 +241 +226 +294 +187 +5.1441% +4.8085% +6.3472% +3.9460%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 253796 +8537 +6374 +3.4808% +2.5762%
EWZ_2P_MBR_Exploris_Human 115447 117345 120068 +4621 +2723 +4.0027% +2.3205%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 132686 +3718 +1980 +2.8829% +1.5149%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 187549 +9375 +4006 +5.2617% +2.1826%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 187549 +9375 +4006 +5.2617% +2.1826%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8275 +430 +100 +120 +72 +26 +5.4812% +1.2232% +1.4715% +0.8777% +0.3152%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12308 +947 +814 +957 +970 +510 +8.3355% +7.0820% +8.4310% +8.5553% +4.3228%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12287 +814 +727 +810 +891 +455 +7.0949% +6.2889% +7.0576% +7.8185% +3.8455%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4309 +181 +217 +209 +126 +4.3847% +5.3030% +5.0976% +3.0122%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4418 +203 +170 +200 +204 +81 +4.8161% +4.0019% +4.7416% +4.8410% +1.8677%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4249 +174 +115 +159 +152 +64 +4.2699% +2.7818% +3.8875% +3.7100% +1.5293%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4445 +196 +208 +201 +214 +91 +4.6129% +4.9091% +4.7361% +5.0579% +2.0900%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7822 +567 +240 +482 +343 +285 +7.8153% +3.1654% +6.5668% +4.5862% +3.7813%
SCIEX_3P 8652 9109 8679 8618 8812 9046 +394 -63 +367 +428 +234 +4.5539% -0.6916% +4.2286% +4.9663% +2.6555%
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 3811 +566 +422 +400 +493 +250 +17.4422% +12.4521% +11.7268% +14.8583% +7.0205%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3633 +379 +200 +342 +199 +141 +11.6472% +5.8258% +10.3920% +5.7950% +4.0378%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 2439 -11 +43 -11 +42 +5 -0.4490% +1.7947% -0.4490% +1.7522% +0.2054%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 2760 +252 +324 +126 +118 +177 +10.0478% +13.3005% +4.7836% +4.4663% +6.8525%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 5800 +221 +144 +296 +254 +146 +3.9613% +2.5460% +5.3779% +4.5799% +2.5822%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 4957 +236 +119 +174 +146 +113 +4.9989% +2.4597% +3.6379% +3.0347% +2.3328%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6154 +308 +205 +311 +349 +189 +5.2686% +3.4460% +5.3226% +6.0121% +3.1685%
SCP_Astral_10ng_ms 5611 5655 5596 5553 5713 5918 +307 +263 +322 +365 +205 +5.4714% +4.6508% +5.7541% +6.5730% +3.5883%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 1526 +234 +102 +120 +238 +167 +18.1115% +7.1629% +8.5349% +18.4783% +12.2884%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2000 +432 +340 +242 +127 +130 +27.5510% +20.4819% +13.7656% +6.7806% +6.9519%
SCP_Astral_250pg_3ms 307 8 350 283 281 432 +125 +424 +82 +149 +151 +40.7166% +5300% +23.4286% +52.6502% +53.7367%
SCP_Astral_250pg_6ms 637 756 751 766 767 807 +170 +51 +56 +41 +40 +26.6876% +6.7460% +7.4567% +5.3525% +5.2151%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2506 +299 +231 +337 +276 +289 +13.5478% +10.1538% +15.5371% +12.3767% +13.0356%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2660 +257 +272 +183 +121 +62 +10.6950% +11.3903% +7.3880% +4.7657% +2.3865%
SCP_Astral_500pg_3ms 525 902 828 835 911 +386 +9 +83 +76 +73.5238% +0.9978% +10.0242% +9.1018%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 1576 +258 +129 +90 +141 +108 +19.5751% +8.9150% +6.0565% +9.8258% +7.3569%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4867 +159 +147 +155 +152 +151 +3.3772% +3.1144% +3.2895% +3.2238% +3.2019%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4926 +241 +226 +294 +187 +5.1441% +4.8085% +6.3472% +3.9460%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7258 +217 +152 +3.0819% +2.1390%
EWZ_2P_MBR_Exploris_Human 6167 6284 6386 +219 +102 +3.5512% +1.6232%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 6996 +109 +33 +1.5827% +0.4739%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6067 +263 +112 +4.5314% +1.8808%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6067 +263 +112 +4.5314% +1.8808%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 96635 +2356
MTAC_3P_Alternating 65832 68769 +2937
MTAC_3P_Standard 65967 68809 +2842
MTAC_Yeast_Alternating_3min 12239 12571 +332
MTAC_Yeast_Alternating_5min 12660 12959 +299
MTAC_Yeast_Standard_3min 12180 12452 +272
MTAC_Yeast_Standard_5min 12772 13106 +334
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 162523 +5238
SCIEX_3P 73429 75692 +2263
SCP_Astral_1000pg_12ms 10022 10750 +728
SCP_Astral_1000pg_24ms 9989 10394 +405
SCP_Astral_1000pg_3ms 6349 6377 +28
SCP_Astral_1000pg_6ms 4949 5295 +346
SCP_Astral_10ng_12ms 16536 16998 +462
SCP_Astral_10ng_24ms 13982 14373 +391
SCP_Astral_10ng_6ms 17349 17955 +606
SCP_Astral_10ng_ms 16458 17049 +591
SCP_Astral_250pg_12ms 3814 4056 +242
SCP_Astral_250pg_24ms 5169 5524 +355
SCP_Astral_250pg_3ms 736 1149 +413
SCP_Astral_250pg_6ms 2066 2135 +69
SCP_Astral_500pg_12ms 6219 6980 +761
SCP_Astral_500pg_24ms 7342 7532 +190
SCP_Astral_500pg_3ms 2234 2515 +281
SCP_Astral_500pg_6ms 4103 4311 +208
SCP_Astral_MBR 19891 20841 +950
Seer_Astral_45 242898
Seer_Astral_single 4739 4926 +187
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 253795 +6373
EWZ_2P_MBR_Exploris_Human 117340 120068 +2728
EWZ_2P_MBR_Exploris_YeastHuman 130702 132683 +1981
MacCoss_Eclipse_Normalization_noNorm 183540 187549 +4009
MacCoss_Eclipse_Normalization_yesNorm 183540 187549 +4009

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 0.0005 +0.0016 +0.0016
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0006 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0015 -0.0011 -0.0015 -0.0005 -0.0008 -0.0008
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0010 +0.0004 -0.0014 -0.0004 -0.0003 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0027 -0.0012 -0.0008 -0.0001 -0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0021 -0.0017 -0.0008 -0.0007 -0.0006 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0032 -0.0013 -0.0018 -0.0019 -0.0011 -0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0016 -0.0006 +0.0004 +0.0008 +0.0009
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0005 -0.0011 -0.0011
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 -0.0003 -0.0002 -0.0006 +0.0008 -0.0008 -0.0008
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006 -0.0008 -0.0002 -0.0006 -0.0004 -0.0001 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0004 +0.0019 +0.0026 +0.0016
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 -0.0035 +0.0019 -0.0002 -0.0004 +0.0011 +0.0011
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 -0.0013 +0.0016 +0.0034 +0.0016 +0.0025 +0.0033
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 -0.0021 -0.0018 -0.0010 +0.0015 +0.0005 +0.0005
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0012 +0.0010 +0.0005 +0.0012 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0022 -0.0002 -0.0031 -0.0007 -0.0009 -0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0021 +0.0003 +0.0005 -0.0003 -0.0004 -0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0023 -0.0015 -0.0024 -0.0001 -0.0011 -0.0011
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0037 +0.0001 +0.0003 -0.0040 +0.0015 +0.0015
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0066 -0.0064 -0.0055 -0.0043 -0.0035 -0.0035
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 -0.0022 +0.0029 +0.0005 +0.0028 +0.0023
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0037 -0.0016 -0.0027 -0.0010 -0.0011 -0.0011
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 -0.0026 -0.0013 -0.0002 -0.0014 -0.0015 -0.0015
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0001 +0.0014 +0.0024 +0.0036 +0.0036
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 -0.0028 +0.0003 +0.0005 -0.0013 -0.0013
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0033 -0.0007 -0.0014 -0.0019 -0.0011 -0.0011
Seer_Astral_45_Entrapment -0.0023 -0.0023 -0.0010 +0.0012 +0.0012
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0015 +0.0007 +0.0007
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0027 -0.0001 +0.0000
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0013 +0.0017 +0.0002
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0020 -0.0010 -0.0009 -0.0025 -0.0027 -0.0009
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0008 +0.0004 +0.0017 +0.0021 +0.0017 +0.0035
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0062 +0.0003 -0.0010 -0.0014 -0.0018
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0037 +0.0004 +0.0001 +0.0011 -0.0003 +0.0020
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0062 -0.0004 -0.0015 -0.0043 -0.0035 -0.0038
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0049 -0.0013 -0.0003 +0.0007 +0.0006
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0004 -0.0002 +0.0026
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0026 +0.0003 -0.0025 +0.0002 -0.0017 -0.0009
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029 0.0001 +0.0032 +0.0039 +0.0027 +0.0036 +0.0030
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0039 +0.0010 +0.0003 +0.0004 +0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0054 +0.0016 +0.0004 +0.0016 +0.0016 +0.0029
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0056 +0.0003 +0.0003 +0.0016 +0.0016 +0.0031
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0024 -0.0006 +0.0026 +0.0019 +0.0021 +0.0023
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0050 +0.0005 -0.0010 +0.0004 +0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0022 +0.0011 +0.0001 -0.0005 +0.0023 +0.0014
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0038 -0.0002 +0.0035 +0.0028 +0.0022 +0.0022
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0038 +0.0016 -0.0018 +0.0016 +0.0008 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0019 +0.0072 +0.0095 +0.0053 +0.0083 +0.0080
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0085 -0.0044 -0.0043 -0.0059 -0.0072 -0.0043
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 -0.0092 +0.0007 -0.0026 -0.0008 -0.0004 -0.0004
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0051 -0.0015 -0.0012 -0.0065 -0.0031 -0.0027
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0050 -0.0030 -0.0049 +0.0002 +0.0012 +0.0011
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0070 -0.0028 -0.0141 -0.0090 -0.0069 -0.0068
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 -0.0027 +0.0018 +0.0018 -0.0019 +0.0029 +0.0015
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0058 +0.0001 -0.0029 -0.0033 -0.0008 -0.0002
Seer_Astral_45_Entrapment -0.0049 -0.0036 -0.0007 +0.0041 +0.0028
Seer_Astral_single_Entrapment -0.0074 -0.0073 -0.0053 +0.0021 +0.0020
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 0.0002 +0.0015 +0.0015
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0002 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0006 -0.0005 -0.0009 -0.0004 -0.0005 -0.0005
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0005 +0.0004 -0.0007 -0.0002 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0013 -0.0003 -0.0000 +0.0001 +0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0014 -0.0010 -0.0006 -0.0004 -0.0006 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0020 -0.0011 -0.0012 -0.0012 -0.0009 -0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 -0.0010 -0.0002 +0.0000 +0.0004 +0.0005
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 -0.0002 -0.0005 -0.0005
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 -0.0002 +0.0002 -0.0007 +0.0004 -0.0002 -0.0002
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004 -0.0001 +0.0004 +0.0001 +0.0001 +0.0003 +0.0003
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0004 +0.0011 +0.0026 +0.0015
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 -0.0022 +0.0023 +0.0006 +0.0008 +0.0015 +0.0015
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 -0.0010 +0.0010 +0.0019 +0.0016 +0.0016 +0.0024
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 -0.0016 -0.0018 -0.0010 +0.0012 +0.0008 +0.0008
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0012 +0.0005 -0.0002 +0.0004 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0015 -0.0001 -0.0019 -0.0003 -0.0007 -0.0007
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0011 +0.0009 +0.0010 +0.0005 +0.0004 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0016 -0.0011 -0.0018 -0.0004 -0.0007 -0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 -0.0015 +0.0015 +0.0012 -0.0012 +0.0017 +0.0017
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0041 -0.0034 -0.0033 -0.0027 -0.0027 -0.0027
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 -0.0019 +0.0018 +0.0003 +0.0011 +0.0011
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0019 -0.0001 -0.0016 +0.0001 -0.0006 -0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 -0.0021 -0.0005 -0.0003 -0.0003 -0.0004 -0.0004
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0004 -0.0014 +0.0008 +0.0020 +0.0020
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 -0.0023 +0.0002 -0.0004 -0.0013 -0.0013
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 -0.0024 -0.0007 -0.0009 -0.0016 -0.0011 -0.0011
Seer_Astral_45_Entrapment -0.0011 -0.0011 -0.0006 +0.0006 +0.0006
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0015 +0.0007 +0.0007
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 -0.0024 -0.0013 -0.0011
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 0.0002 +0.0018 +0.0008
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0013 -0.0011 -0.0010 -0.0016 -0.0015 -0.0007
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0012 -0.0004 +0.0002 +0.0009 +0.0006 +0.0012
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0034 +0.0002 -0.0001 -0.0005 -0.0012
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 -0.0024 +0.0013 -0.0003 +0.0000 -0.0011 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0043 -0.0006 -0.0008 -0.0030 -0.0028 -0.0025
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0048 -0.0025 -0.0021 -0.0011 -0.0014
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0001 +0.0004 +0.0020
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0019 +0.0008 -0.0025 -0.0002 -0.0003 +0.0001
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020 0.0004 +0.0039 +0.0036 +0.0025 +0.0031 +0.0024
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0027 +0.0010 -0.0005 +0.0005 +0.0012
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0046 +0.0003 +0.0010 +0.0012 -0.0003 +0.0014
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0034 +0.0010 -0.0001 +0.0006 -0.0003 +0.0030
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0009 +0.0016 +0.0026 +0.0031 +0.0031 +0.0024
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0040 +0.0007 -0.0009 +0.0002 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0022 +0.0010 -0.0009 -0.0008 +0.0003 +0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0020 +0.0001 +0.0026 +0.0017 +0.0012 +0.0020
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0039 -0.0000 -0.0020 -0.0001 -0.0010 -0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0014 +0.0052 +0.0055 +0.0033 +0.0044 +0.0058
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0067 -0.0054 -0.0035 -0.0064 -0.0067 -0.0039
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 -0.0065 +0.0035 +0.0003 -0.0010 -0.0018 -0.0017
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0034 +0.0006 +0.0001 -0.0027 -0.0007 -0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0040 -0.0021 -0.0041 +0.0003 +0.0005 +0.0027
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 -0.0036 -0.0004 -0.0102 -0.0064 -0.0039 -0.0038
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 -0.0016 +0.0004 +0.0007 -0.0025 +0.0012 +0.0003
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0035 -0.0011 -0.0017 -0.0013 -0.0007 +0.0006
Seer_Astral_45_Entrapment -0.0029 -0.0009 -0.0008 +0.0021 +0.0001
Seer_Astral_single_Entrapment -0.0074 -0.0069 -0.0052 +0.0022 +0.0016
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 30062 +5667 +5474

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 1259 +488 +497

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0419 +0.0103 +0.0109

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 1042 +198 +1671

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 165 -25 +109

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0.1583 -0.0668 +0.1583

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 2 +1 +0 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 4 +1 +2 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 13 +4 +1 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 1 +0 +0 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 1 +0 +0 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 1 +0 +0 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1448 -0.0011 +0.0028 +0.0048 +0.0075 +0.0073
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1402 +0.0009 +0.0040 +0.0051 +0.0078 +0.0077
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1460 +0.0004 +0.0035 +0.0052 +0.0051
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1425 -0.0106 +0.0016 +0.0049 +0.0069 +0.0070
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1648 -0.0050 +0.0009 +0.0032 +0.0049 +0.0050
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1391 -0.0112 +0.0025 +0.0054 +0.0068 +0.0068
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1597 +0.0117 +0.0098 +0.0102 +0.0092 +0.0091
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184 0.1231 -0.0053 -0.0050 +0.0036 +0.0048 +0.0047
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5880 +0.0011 +0.0011
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.1686 -0.0031 -0.0032

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0784 +0.0021 +0.0045 +0.0057 +0.0064 +0.0027
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0738 +0.0015 +0.0035 +0.0039 +0.0050 +0.0020
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0701 +0.0028 +0.0040 +0.0042 +0.0013
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0599 -0.0179 -0.0004 +0.0007 +0.0011 -0.0002
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0767 -0.0025 +0.0011 +0.0014 -0.0005 -0.0007
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0602 -0.0169 +0.0034 +0.0033 +0.0033 +0.0018
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1100 +0.0072 +0.0081 +0.0064 +0.0073 +0.0067
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795 0.0830 -0.0034 -0.0002 +0.0043 +0.0045 +0.0035
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5894 +0.0013 +0.0014
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1189 -0.0044 -0.0058

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 -0.0756 -0.0020 +0.0070 +0.0012 +0.0000 -0.0021
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0353 -0.0076 +0.0055 -0.0002 -0.0001 -0.0054
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0124 +0.0007 -0.0023 -0.0001 -0.0000 +0.0115
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.1294 +0.0012 -0.0008 +0.0020 -0.0002 +0.0027
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0690 -0.0054 -0.0006 -0.0003 +0.0001 -0.0034
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0206 -0.0080 +0.0050 -0.0016 -0.0001 -0.0083
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.2557 -0.0059 -0.0059 +0.0211 -0.0012 +0.0204
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0798 +0.0062 +0.0047 -0.0191 -0.0001 +0.0194
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.3098 +0.0183 -0.0240 +0.0287 +0.0020 +0.0293
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.0923 +0.0048 -0.0054 -0.0067 +0.0002 +0.0039
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0686 +0.0009 +0.0001 -0.0089 -0.0000 +0.0231
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2055 +0.0051 -0.0017 +0.0004 +0.0004 +0.0015
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.0209 -0.0032 -0.0062 -0.0160 +0.0006 -0.0022
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.1296 +0.0043 -0.0045 -0.0054 -0.0001 +0.0277
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 -0.0760 +0.0169 -0.0238 +0.0355 +0 -0.0205
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 -0.0864 +0.0195 +0.0041 +0.0006 +0.0003 +0.0088
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0858 -0.0031 +0.0125 +0.0006 -0.0005 +0.0181
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0087 -0.0051 -0.0071 +0.0012 +0.0002 +0.0050
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 -0.0386 +0.0119 -0.0026 -0.0002 -0.0000 -0.0038
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0683 -0.0238 +0.0049 +0.0003 -0.0001 +0.0066
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0322 -0.0331 +0.0073 +0.0004 +0.0000 +0.0092
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 -0.0012 +0.0109 -0.0100 -0.0011 +0.0003 -0.0075
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0530 -0.0356 -0.0145 +0.0024 +0.0008 -0.0066
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0403 -0.0468 -0.0064 -0.0010 -0.0004 +0.0039

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 -0.0711 +0.0009 +0.0076 -0.0005 +0.0006 -0.0028
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0356 -0.0089 +0.0045 +0.0004 +0.0011 -0.0066
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0104 +0.0054 -0.0044 +0.0010 +0.0033 +0.0035
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.1175 +0.0013 +0.0005 -0.0055 +0.0004 -0.0035
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0673 -0.0060 -0.0005 -0.0005 -0.0005 -0.0023
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0232 -0.0084 +0.0078 -0.0007 +0.0020 -0.0099
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.2456 -0.0077 -0.0028 +0.0144 -0.0004 +0.0249
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0722 +0.0048 +0.0016 -0.0170 -0.0057 +0.0222
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.3302 +0.0504 -0.0481 +0.0073 +0.0089 +0.0559
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.0827 +0.0031 -0.0032 -0.0081 +0.0006 +0.0062
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0644 +0.0011 -0.0008 -0.0084 -0.0000 +0.0224
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2054 +0.0036 -0.0008 +0.0016 +0.0018 +0.0003
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 -0.0195 +0.0005 -0.0096 -0.0297 +0.0070 +0.0079
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.1463 +0.0056 -0.0034 -0.0033 +0.0038 +0.0340
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 -0.1238 +0.0405 -0.0089 +0.0322 +0.0276 -0.0210
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 -0.0803 +0.0258 +0.0029 -0.0003 -0.0025 +0.0129
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0846 -0.0049 +0.0142 +0.0054 -0.0021 +0.0189
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0089 -0.0001 -0.0108 +0.0000 -0.0004 +0.0052
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 -0.0384 +0.0137 -0.0048 +0.0001 -0.0001 -0.0022
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0687 -0.0232 +0.0027 +0.0012 -0.0002 +0.0063
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0316 -0.0350 +0.0076 +0.0002 -0.0001 +0.0100
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 -0.0026 +0.0131 -0.0109 +0.0003 +0.0016 -0.0106
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0530 -0.0435 -0.0160 +0.0023 +0.0005 -0.0054
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0503 -0.0508 -0.0078 +0.0009 +0.0008 +0.0052

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.3646 +0.0343 +0.0202 -0.0086 +0.0005 +0.0562
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.2453 +0.0169 -0.0058 +0.0004 +0.0004 +0.0350
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.3209 +0.0117 -0.0078 +0.0011 -0.0001 +0.0602
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.4066 +0.0441 -0.0007 -0.0136 +0.0007 +0.1079
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.2495 +0.0164 -0.0031 -0.0002 +0.0007 +0.0295
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.3322 +0.0170 -0.0063 +0.0017 +0.0006 +0.0636
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.7736 +0.0445 +0.0761 -0.1281 +0.0017 +0.2010
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.1827 -0.0103 +0.0134 -0.0147 -0.0018 +0.0333
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 1.3512 -0.0030 +0.1483 +0.0078 -0.0120 +0.4058
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.4173 +0.0037 +0.0045 +0.0051 +0.0002 +0.0667
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.1691 +0.0676 -0.0087 -0.0168 +0.0006 +0.0168
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.3649 +0.0316 +0.0062 -0.0049 +0.0001 +0.0295
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.9122 -0.0093 +0.0378 -0.0706 +0.0033 +0.3322
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.3382 +0.0977 -0.0155 +0.0159 +0.0001 +0.0902
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 2.0931 +0.0737 +0.1982 -0.0827 -0.0008 +0.8187
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 0.5803 +0.0321 -0.0450 -0.0051 -0.0001 +0.0977
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 0.6902 +0.0200 -0.0293 -0.0344 -0.0000 +0.1484
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 0.1429 +0.0068 -0.0387 -0.0080 +0.0005 +0.0357
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 0.1691 +0.0190 -0.0584 -0.0028 -0.0002 +0.0174
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 0.2141 +0.0281 -0.0478 -0.0031 -0.0006 +0.0204
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 0.1506 +0.0273 -0.0601 -0.0037 +0.0000 +0.0166
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 0.2057 +0.0130 -0.0614 -0.0008 +0.0011 +0.0197
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 0.6607 +0.0619 -0.0455 -0.0143 +0.0038 +0.0829
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 0.5555 +0.0688 -0.0494 -0.0103 +0.0013 +0.0571

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.3635 +0.0149 -0.0182 -0.0054 +0.1015 +0.1412
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.1269 +0.0035 +0.0005 +0.0043 +0.0189 +0.0265
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.2162 -0.0157 -0.0104 +0.0083 +0.0352 +0.0688
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.2861 -0.0042 +0.0002 -0.0084 +0.0711 +0.0954
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.1362 +0.0032 -0.0030 +0.0035 +0.0313 +0.0333
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.1614 +0.0000 +0.0073 -0.0081 +0.0305 +0.0056
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.5457 +0.0146 +0.0452 -0.0355 +0.0761 +0.2419
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.1179 -0.0057 -0.0062 -0.0031 +0.0154 +0.0539
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 1.4091 -0.1294 +0.1626 +0.0090 +0.0813 +0.8273
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.1223 -0.0046 +0.0074 +0.0016 +0.0039 +0.0493
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0505 +0.0109 -0.0066 +0.0090 -0.0065 +0.0137
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.1314 -0.0053 +0.0093 +0.0025 +0.0083 +0.0407
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.5537 -0.0166 +0.0170 -0.0166 +0.0315 +0.3047
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.1797 +0.0068 -0.0006 -0.0039 +0.0560 +0.0499
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 1.3442 -0.0891 -0.0032 -0.0082 +0.0618 +0.8519
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 0.3143 +0.0682 -0.0593 -0.0056 +0.0928 -0.0008
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 0.4170 +0.0668 -0.0849 -0.0031 +0.1131 +0.0603
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 0.0709 +0.0113 -0.0357 +0.0198 +0.0064 +0.0117
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 0.0696 -0.0054 -0.0154 +0.0040 +0.0050 +0.0159
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 0.0854 -0.0011 -0.0225 +0.0112 +0.0037 +0.0209
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 0.0641 +0.0094 -0.0181 -0.0013 +0.0020 +0.0165
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 0.1190 -0.0134 -0.0199 -0.0090 +0.0263 +0.0253
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 0.4097 +0.0271 -0.0671 +0.0055 +0.0651 +0.0854
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 0.3421 +0.0501 -0.0498 +0.0220 +0.0590 +0.0077

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 22.2600 -1.8100 +4.9400 +2.3900 +5.1300 +3.2300 -7.5197% +28.5219% +12.0282% +29.9475% +16.9732%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.4900 -3.2600 +0.4200 +1.1300 +0.2000 +1.3600 -25.5686% +4.6307% +13.5167% +2.1529% +16.7282%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 10.3200 -1.9900 +1.3600 +0.6600 -0.4900 +0.5300 -16.1657% +15.1786% +6.8323% -4.5328% +5.4137%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.5800 +0.3500 +0.1700 -0.3600 +0.3000 +8.2742% +3.8549% -7.2874% +7.0093%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.7100 -0.6700 +0.3300 -0.0400 +0.1700 +0.1500 -12.4535% +7.5342% -0.8421% +3.7445% +3.2895%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.4000 -1.0300 +0.2600 -0.0400 -0.2600 +0.1600 -18.9687% +6.2802% -0.9009% -5.5794% +3.7736%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.5400 -0.0100 +1.1200 +1.0100 +1.0800 +1 -0.1802% +25.3394% +22.2958% +24.2152% +22.0264%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 17.7400 -9.9200 -2.0200 -0.5800 -1.5400 -0.1600 -35.8641% -10.2227% -3.1659% -7.9876% -0.8939%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900 26.4900 -3.8000 +0.8000 -0.0700 -2.8800 -0.2000 -12.5454% +3.1141% -0.2636% -9.8059% -0.7493%
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.0300 -0.7600 +0.4400 +0.3800 +0.9400 +0.6700 -13.1261% +9.5861% +8.1720% +22.9829% +15.3670%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.1100 -1.1500 +0.7100 -0.7700 +0.1000 -18.3706% +16.1364% -13.0952% +1.9960%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.4800 -0.0400 +0.7500 -0.3200 +0.8400 +0.6500 -0.8850% +20.1072% -6.6667% +23.0769% +16.9713%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.9000 -0.8400 +1.3900 +0.9800 +1.4600 +1.1800 -14.6341% +39.6011% +25.0000% +42.4419% +31.7204%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.2400 -0.8300 +0.7100 +0.7300 +0.5000 +0.7700 -11.7397% +12.8391% +13.2486% +8.7108% +14.0768%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.9400 -0.6500 +1.2100 +0.8000 +1.4000 +1.0500 -8.5639% +21.1169% +13.0293% +25.2708% +17.8268%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.6300 -1.7500 +0.7000 +1 +0.0100 +0.6700 -23.7127% +14.1988% +21.5983% +0.1779% +13.5081%
SCP_Astral_10ng_ms 6.4500 4.6700 4.3000 4.4100 4.4200 4.9500 -1.5000 +0.2800 +0.6500 +0.5400 +0.5300 -23.2558% +5.9957% +15.1163% +12.2449% +11.9910%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.1300 -0.6100 +0.4700 +0.7400 +0.5400 -12.8692% +12.8415% +21.8289% +15.0418%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.5400 -0.7200 +0.7000 +0.7800 +0.4800 -13.6882% +18.2292% +20.7447% +11.8227%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.1700 -0.4800 +0.7400 +0.4600 +0.7200 +0.6200 -10.3226% +21.5743% +12.3989% +20.8696% +17.4648%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 3.9700 -0.2000 +0.6800 +0.2800 +0.7000 +0.4500 -4.7962% +20.6687% +7.5881% +21.4067% +12.7841%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.2900 -0.9900 +0.7600 +0.6900 +0.8000 +0.5900 -18.7500% +21.5297% +19.1667% +22.9226% +15.9459%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.7000 -0.8100 +0.8800 +0.5500 -0.1100 +0.6700 -14.7005% +23.0366% +13.2530% -2.2869% +16.6253%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.1200 -0.6100 +0.6600 +0.5500 +0.3500 -12.8964% +19.0751% +15.4062% +9.2838%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.2400 -0.4100 +0.6200 +0.5100 +0.4600 +0.7400 -8.8172% +17.1271% +13.6729% +12.1693% +21.1429%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 6.9700 -2.0700 +0.4200 +0.8700 -0.2400 -22.8982% +6.4122% +14.2623% -3.3287%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.8700 +0.4000 +0.7300 -0.7100 -0.3500 +8.9485% +17.6329% -12.7240% -6.7050%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 26.6000 +0.4200 +2.3200 +1.6043% +9.5552%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 14.8300 +1.9200 +2.4100 +14.8722% +19.4042%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 13.9300 +1.8700 -0.4800 +15.5058% -3.3310%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 29.3100 +1.8000 +1.0300 +6.5431% +3.6421%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 28.4700 +0.8000 -0.0300 +2.8912% -0.1053%

EWZ_2P_MBR_Exploris

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

EWZ_2P_MBR_Exploris_YeastHuman

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

KEAP1KO_Eclipse

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

MacCoss_Eclipse_Normalization_yesNorm

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

Olsen_Exploris_3P

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCIEX_3P

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCIEX_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_250pg_12ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_250pg_3ms_Entrapment

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_250pg_6ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_45_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

irt_error_refinement_run_1.png
irt_error_refinement_run_1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png