Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6656655
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1292235 1300832 +204338 -6173 -11123 +7291 +8597 +18.6356% -0.4723% -0.8478% +0.5636% +0.6653%
MTAC_3P_Alternating 586322 615762 610710 599881 621395 628621 +42299 +12859 +17911 +28740 +7226 +7.2143% +2.0883% +2.9328% +4.7910% +1.1629%
MTAC_3P_Standard 596590 623022 617574 607435 625424 632540 +35950 +9518 +14966 +25105 +7116 +6.0259% +1.5277% +2.4234% +4.1330% +1.1378%
MTAC_Yeast_Alternating_3min 137548 136839 135560 145706 148495 +10947 +11656 +12935 +2789 +7.9587% +8.5180% +9.5419% +1.9141%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 164379 167626 +11985 +11075 +11117 +12591 +3247 +7.7004% +7.0744% +7.1031% +8.1214% +1.9753%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 148110 150086 +11577 +10701 +10794 +12201 +1976 +8.3583% +7.6773% +7.7492% +8.8487% +1.3341%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 165591 168886 +9924 +10154 +9726 +10964 +3295 +6.2430% +6.3969% +6.1108% +6.9427% +1.9898%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3412790
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1319303 1321233 +298497 +166564 +197360 +137149 +1930 +29.1861% +14.4253% +17.5607% +11.5827% +0.1463%
SCIEX_3P 672242 749525 722698 714454 743897
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 53263 53512 +12630 +11812 +11087 +11412 +249 +30.8938% +28.3261% +26.1332% +27.1069% +0.4675%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 51247 51294 +10225 +8892 +9271 +10142 +47 +24.8971% +20.9707% +22.0617% +24.6452% +0.0917%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 42044 42313 +33573 +19198 +19298 +19400 +269 +384.1304% +83.0543% +83.8497% +84.6681% +0.6398%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 28680 28650 +11715 +11097 +10241 +10302 -30 +69.1763% +63.2200% +55.6304% +56.1478% -0.1046%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 114502 115528 +15620 +12637 +16545 +16880 +1026 +15.6344% +12.2819% +16.7150% +17.1113% +0.8961%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 85070 85789 +14691 +13061 +14344 +14663 +719 +20.6630% +17.9587% +20.0770% +20.6155% +0.8452%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 123935 124386 +18682 +17889 +18764 +19952 +451 +17.6739% +16.7977% +17.7652% +19.1049% +0.3639%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 128906 129875 +14718 +12559 +15553 +16794 +969 +12.7808% +10.7053% +13.6046% +14.8513% +0.7517%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 18714 18701 +8507 +7895 +7463 +7468 -13 +83.4510% +73.0613% +66.4086% +66.4827% -0.0695%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 20673 20310 +5503 +4877 +4269 +4611 -363 +37.1649% +31.6011% +26.6131% +29.3713% -1.7559%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 8726 8749 +7488 +6717 +6299 +6363 +23 +593.8144% +330.5610% +257.1020% +266.6806% +0.2636%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16166 15803 +14367 +11020 +10113 +10072 -363 +1000.4875% +230.3993% +177.7329% +175.7459% -2.2455%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 32026 32005 +10295 +10110 +9425 +9542 -21 +47.4205% +46.1749% +41.7405% +42.4787% -0.0656%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 32256 32088 +6228 +5945 +5828 +6463 -168 +24.0835% +22.7403% +22.1935% +25.2215% -0.5208%
SCP_Astral_500pg_3ms 3484 6898 6834 19322 19866 +16382 +12968 +13032 +544 +470.2067% +187.9965% +190.6936% +2.8154%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 28202 28124 +17425 +16650 +15242 +15235 -78 +162.8657% +145.1107% +118.3201% +118.2016% -0.2766%
SCP_Astral_MBR 92167 93585 91884 90864 108777 109777 +17610 +16192 +17893 +18913 +1000 +19.1066% +17.3019% +19.4735% +20.8146% +0.9193%
Seer_Astral_45 2512737 3124006 3135497 2971207 3001003
Seer_Astral_single 56699 55793 55891 60660 60698 +3999 +4905 +4807 +38 +7.0530% +8.7914% +8.6007% +0.0626%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17275427
EWZ_2P_MBR_Exploris 1776128 1865977 1876350 +100222 +10373 +5.6427% +0.5559%
EWZ_2P_MBR_Exploris_Human 836809 881569 888655 +51846 +7086 +6.1957% +0.8038%
EWZ_2P_MBR_Exploris_YeastHuman 914924 977795 984609 +69685 +6814 +7.6165% +0.6969%
MacCoss_Eclipse_Normalization_noNorm 2078034 2247711 2272057 +194023 +24346 +9.3369% +1.0831%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2247711 2272057 +194023 +24346 +9.3369% +1.0831%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 107890
KEAP1KO_Eclipse 111504 133619 131359 132031 148329 148647 +37143 +15028 +17288 +16616 +318 +33.3109% +11.2469% +13.1609% +12.5849% +0.2144%
MTAC_3P_Alternating 108267 117352 114659 114816 123799 124068 +15801 +6716 +9409 +9252 +269 +14.5945% +5.7230% +8.2061% +8.0581% +0.2173%
MTAC_3P_Standard 110265 118693 115800 116148 124703 124978 +14713 +6285 +9178 +8830 +275 +13.3433% +5.2952% +7.9257% +7.6024% +0.2205%
MTAC_Yeast_Alternating_3min 48858 49032 48995 55378 55471 +6613 +6439 +6476 +93 +13.5351% +13.1322% +13.2177% +0.1679%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 61497 62411 +8442 +7336 +6571 +6527 +914 +15.6423% +13.3200% +11.7676% +11.6796% +1.4863%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 56180 56673 +8052 +7008 +6384 +6213 +493 +16.5607% +14.1105% +12.6946% +12.3127% +0.8775%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 62196 62696 +7636 +6777 +5989 +5869 +500 +13.8685% +12.1193% +10.5613% +10.3278% +0.8039%
Olsen_Astral_3P 198770 231103 234505 234149 239695
Olsen_Exploris_3P 51272 58784 55047 58593 72007 71740 +20468 +12956 +16693 +13147 -267 +39.9204% +22.0400% +30.3250% +22.4378% -0.3708%
SCIEX_3P 82206 93920 87927 87858 102130
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 20401 20220 +5780 +5262 +4971 +4513 -181 +40.0277% +35.1785% +32.5989% +28.7324% -0.8872%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 19303 19253 +4770 +4188 +4337 +4183 -50 +32.9352% +27.7995% +29.0762% +27.7571% -0.2590%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 17210 17282 +8542 +7906 +7893 +7918 +72 +97.7346% +84.3217% +84.0665% +84.5579% +0.4184%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 16380 16391 +7493 +7132 +6607 +6581 +11 +84.2099% +77.0278% +67.5286% +67.0846% +0.0672%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 41662 41869 +7004 +5572 +7527 +7444 +207 +20.0889% +15.3511% +21.9178% +21.6238% +0.4969%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 31075 31306 +6657 +5840 +6187 +6083 +231 +27.0072% +22.9325% +24.6308% +24.1169% +0.7434%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 45956 46102 +9414 +8426 +8453 +8681 +146 +25.6596% +22.3644% +22.4521% +23.1982% +0.3177%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 46670 47136 +6980 +5591 +7093 +7243 +466 +17.3822% +13.4577% +17.7135% +18.1561% +0.9985%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7634 7595 +3929 +3646 +3386 +3349 -39 +107.1740% +92.3272% +80.4467% +78.8742% -0.5109%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8261 8114 +2815 +2503 +2259 +2048 -147 +53.1232% +44.6088% +38.5824% +33.7620% -1.7794%
SCP_Astral_250pg_3ms 675 721 908 879 4172 4144 +3469 +3423 +3236 +3265 -28 +513.9259% +474.7573% +356.3877% +371.4448% -0.6711%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6891 6630 +5194 +4892 +4485 +4467 -261 +361.6992% +281.4730% +209.0909% +206.5187% -3.7875%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 12669 12669 +4875 +4697 +4417 +4263 +0 +62.5481% +58.9187% +53.5264% +50.7138% +0%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 12395 12229 +3071 +2887 +2858 +2815 -166 +33.5335% +30.9034% +30.4983% +29.9023% -1.3392%
SCP_Astral_500pg_3ms 1846 2600 2586 8323 8617 +6771 +6017 +6031 +294 +366.7931% +231.4231% +233.2173% +3.5324%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 11257 11379 +7505 +7224 +6605 +6574 +122 +193.7274% +173.8628% +138.3536% +136.8158% +1.0838%
SCP_Astral_MBR 24110 24991 24570 24544 30152 30302 +6192 +5311 +5732 +5758 +150 +25.6823% +21.2517% +23.3293% +23.4599% +0.4975%
Seer_Astral_45 69584 90103 87204 87620 91412
Seer_Astral_single 56699 55793 55891 60660 60698 +3999 +4905 +4807 +38 +7.0530% +8.7914% +8.6007% +0.0626%
YEAST_KO_Astral 66823 87888 87428 86498 85126
EWZ_2P_MBR_Exploris 55271 61651 61534 +6263 -117 +11.3314% -0.1898%
EWZ_2P_MBR_Exploris_Human 48465 53608 53668 +5203 +60 +10.7356% +0.1119%
EWZ_2P_MBR_Exploris_YeastHuman 51246 57183 57184 +5938 +1 +11.5872% +0.0017%
MacCoss_Eclipse_Normalization_noNorm 73278 79190 79152 +5874 -38 +8.0160% -0.0480%
MacCoss_Eclipse_Normalization_yesNorm 73278 79190 79152 +5874 -38 +8.0160% -0.0480%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 604895
KEAP1KO_Eclipse 87920 92888 93982 93441 90649 90526 +2606 -2362 -3456 -2915 -123 +2.9641% -2.5428% -3.6773% -3.1196% -0.1357%
MTAC_3P_Alternating 63773 63974 63611 63015 65375 65953 +2180 +1979 +2342 +2938 +578 +3.4184% +3.0934% +3.6818% +4.6624% +0.8841%
MTAC_3P_Standard 64317 64464 64219 63385 65743 66371 +2054 +1907 +2152 +2986 +628 +3.1936% +2.9582% +3.3510% +4.7109% +0.9552%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12589 12724 +657 +754 +784 +135 +5.4446% +6.2991% +6.5662% +1.0724%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12877 12943 +511 +472 +581 +615 +66 +4.1104% +3.7848% +4.6999% +4.9886% +0.5125%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12568 12603 +595 +556 +643 +635 +35 +4.9550% +4.6153% +5.3763% +5.3058% +0.2785%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12961 13002 +441 +537 +525 +592 +41 +3.5109% +4.3081% +4.2077% +4.7703% +0.3163%
Olsen_Astral_3P 236395 245756 242430 240719 238322
Olsen_Exploris_3P 146224 153534 153990 155827 156821 157078 +10854 +3544 +3088 +1251 +257 +7.4229% +2.3083% +2.0053% +0.8028% +0.1639%
SCIEX_3P 70810 74366 72157 71550 73551
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 11410 11697 +2534 +2169 +2112 +2363 +287 +27.6547% +22.7645% +22.0344% +25.3160% +2.5153%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11205 11283 +1985 +1522 +1871 +1730 +78 +21.3487% +15.5927% +19.8789% +18.1095% +0.6961%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 9023 9114 +6664 +3030 +2867 +2998 +91 +272% +49.8028% +45.8940% +49.0190% +1.0085%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6458 6507 +1804 +1919 +1549 +1584 +49 +38.3585% +41.8265% +31.2424% +32.1755% +0.7587%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17253 17295 +1105 +1015 +1270 +1240 +42 +6.8252% +6.2346% +7.9251% +7.7235% +0.2434%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14759 14873 +1274 +1032 +1185 +1202 +114 +9.3683% +7.4561% +8.6572% +8.7923% +0.7724%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 17489 17569 +1317 +1293 +1452 +1644 +80 +8.1036% +7.9442% +9.0091% +10.3234% +0.4574%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18141 18289 +1272 +1111 +1376 +1544 +148 +7.4749% +6.4676% +8.1358% +9.2207% +0.8158%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5202 5362 +1715 +1449 +1498 +1823 +160 +47.0250% +37.0304% +38.7681% +51.5117% +3.0757%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5561 5532 +1232 +929 +735 +555 -29 +28.6512% +20.1825% +15.3221% +11.1513% -0.5215%
SCP_Astral_250pg_3ms 576 22 936 741 2775 2747 +2171 +2725 +1811 +2006 -28 +376.9097% +12386.3636% +193.4829% +270.7152% -1.0090%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4489 4068 +3431 +1988 +2039 +2022 -421 +538.6185% +95.5769% +100.4929% +98.8270% -9.3785%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7731 7820 +1575 +1474 +1804 +1693 +89 +25.2202% +23.2272% +29.9867% +27.6318% +1.1512%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8125 8070 +1348 +1341 +1058 +1047 -55 +20.0536% +19.9287% +15.0884% +14.9082% -0.6769%
SCP_Astral_500pg_3ms 982 2365 2177 5275 5274 +4292 +2909 +3097 -1 +437.0672% +123.0021% +142.2600% -0.0190%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7102 7131 +3423 +3124 +3086 +3213 +29 +92.3139% +77.9636% +76.2917% +82.0061% +0.4083%
SCP_Astral_MBR 20165 20129 20074 19793 20566 20565 +400 +436 +491 +772 -1 +1.9836% +2.1660% +2.4459% +3.9004% -0.0049%
Seer_Astral_45 225377 241455 241952 237727 233436
Seer_Astral_single 4685 4700 4632 5060 5044 +359 +344 +412 -16 +7.6628% +7.3191% +8.8946% -0.3162%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1341725
EWZ_2P_MBR_Exploris 245259 247748 247586 +2327 -162 +0.9488% -0.0654%
EWZ_2P_MBR_Exploris_Human 115447 115558 115398 -49 -160 -0.0424% -0.1385%
EWZ_2P_MBR_Exploris_YeastHuman 128968 131740 131834 +2866 +94 +2.2223% +0.0714%
MacCoss_Eclipse_Normalization_noNorm 178174 187459 188154 +9980 +695 +5.6013% +0.3707%
MacCoss_Eclipse_Normalization_yesNorm 178174 187459 188154 +9980 +695 +5.6013% +0.3707%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6423
KEAP1KO_Eclipse 7845 8175 8155 8203 8439 8384 +539 +209 +229 +181 -55 +6.8706% +2.5566% +2.8081% +2.2065% -0.6517%
MTAC_3P_Alternating 11361 11494 11351 11338 12050 12161 +800 +667 +810 +823 +111 +7.0416% +5.8030% +7.1359% +7.2588% +0.9212%
MTAC_3P_Standard 11473 11560 11477 11396 12069 12149 +676 +589 +672 +753 +80 +5.8921% +5.0952% +5.8552% +6.6076% +0.6629%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4390 4408 +280 +316 +308 +18 +6.7829% +7.7224% +7.5122% +0.4100%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4457 4463 +248 +215 +245 +249 +6 +5.8837% +5.0612% +5.8084% +5.9089% +0.1346%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4358 4377 +302 +243 +287 +280 +19 +7.4110% +5.8781% +7.0171% +6.8343% +0.4360%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4452 4465 +216 +228 +221 +234 +13 +5.0835% +5.3812% +5.2074% +5.5306% +0.2920%
Olsen_Astral_3P 13820 14378 14293 14296 14585
Olsen_Exploris_3P 7255 7582 7340 7479 7941 7926 +671 +344 +586 +447 -15 +9.2488% +4.5371% +7.9837% +5.9767% -0.1889%
SCIEX_3P 8652 9109 8679 8618 9438
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4115 4219 +974 +830 +808 +901 +104 +30.0154% +24.4910% +23.6881% +27.1549% +2.5273%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4006 4050 +796 +617 +759 +616 +44 +24.4622% +17.9726% +23.0629% +17.9383% +1.0984%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3337 3410 +960 +1014 +960 +1013 +73 +39.1837% +42.3205% +39.1837% +42.2612% +2.1876%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3456 3489 +981 +1053 +855 +847 +33 +39.1148% +43.2266% +32.4601% +32.0590% +0.9549%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6011 6045 +466 +389 +541 +499 +34 +8.3528% +6.8777% +9.8292% +8.9975% +0.5656%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5220 5210 +489 +372 +427 +399 -10 +10.3580% +7.6891% +8.9275% +8.2935% -0.1916%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6134 6191 +580 +536 +595 +638 +57 +10.3368% +9.4783% +10.6326% +11.4893% +0.9292%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6326 6378 +532 +429 +535 +573 +52 +9.1002% +7.2113% +9.1563% +9.8708% +0.8220%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1985 2008 +716 +584 +602 +720 +23 +55.4180% +41.0112% +42.8165% +55.9006% +1.1587%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2003 2013 +445 +353 +255 +140 +10 +28.3801% +21.2651% +14.5051% +7.4746% +0.4993%
SCP_Astral_250pg_3ms 307 8 350 283 1162 1173 +866 +1165 +823 +890 +11 +282.0847% +14562.5000% +235.1429% +314.4876% +0.9466%
SCP_Astral_250pg_6ms 637 756 751 766 1745 1543 +906 +787 +792 +777 -202 +142.2292% +104.1005% +105.4594% +101.4360% -11.5759%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2853 2864 +657 +589 +695 +634 +11 +29.7689% +25.8901% +32.0424% +28.4305% +0.3856%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2975 2934 +531 +546 +457 +395 -41 +22.0974% +22.8643% +18.4497% +15.5573% -1.3782%
SCP_Astral_500pg_3ms 525 902 828 2072 2057 +1532 +1155 +1229 -15 +291.8095% +128.0488% +148.4300% -0.7239%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2624 2665 +1347 +1218 +1179 +1230 +41 +102.2003% +84.1742% +79.3405% +85.7143% +1.5625%
SCP_Astral_MBR 4708 4720 4712 4715 5024 5003 +295 +283 +291 +288 -21 +6.2659% +5.9958% +6.1757% +6.1082% -0.4180%
Seer_Astral_45 5802 6297 6122 6133 6231
Seer_Astral_single 4685 4700 4632 5060 5044 +359 +344 +412 -16 +7.6628% +7.3191% +8.8946% -0.3162%
YEAST_KO_Astral 4565 4795 4676 4673 4737
EWZ_2P_MBR_Exploris 7041 7234 7238 +197 +4 +2.7979% +0.0553%
EWZ_2P_MBR_Exploris_Human 6167 6252 6218 +51 -34 +0.8270% -0.5438%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7138 7140 +253 +2 +3.6736% +0.0280%
MacCoss_Eclipse_Normalization_noNorm 5804 6247 6258 +454 +11 +7.8222% +0.1761%
MacCoss_Eclipse_Normalization_yesNorm 5804 6247 6258 +454 +11 +7.8222% +0.1761%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 604890
KEAP1KO_Eclipse 90611 90494 -117
MTAC_3P_Alternating 65364 65947 +583
MTAC_3P_Standard 65728 66359 +631
MTAC_Yeast_Alternating_3min 12579 12715 +136
MTAC_Yeast_Alternating_5min 12857 12930 +73
MTAC_Yeast_Standard_3min 12560 12579 +19
MTAC_Yeast_Standard_5min 12943 12997 +54
Olsen_Astral_3P 238278
Olsen_Exploris_3P 156819 157075 +256
SCIEX_3P 73546
SCP_Astral_1000pg_12ms 11409 11691 +282
SCP_Astral_1000pg_24ms 11204 11281 +77
SCP_Astral_1000pg_3ms 9020 9113 +93
SCP_Astral_1000pg_6ms 6450 6501 +51
SCP_Astral_10ng_12ms 17249 17294 +45
SCP_Astral_10ng_24ms 14758 14873 +115
SCP_Astral_10ng_3ms 17484 17558 +74
SCP_Astral_10ng_6ms 18141 18289 +148
SCP_Astral_250pg_12ms 5202 5362 +160
SCP_Astral_250pg_24ms 5557 5531 -26
SCP_Astral_250pg_3ms 2770 2743 -27
SCP_Astral_250pg_6ms 4489 4068 -421
SCP_Astral_500pg_12ms 7729 7820 +91
SCP_Astral_500pg_24ms 8124 8069 -55
SCP_Astral_500pg_3ms 5272 5272 +0
SCP_Astral_500pg_6ms 7098 7129 +31
SCP_Astral_MBR 20564 20565 +1
Seer_Astral_45 233431
Seer_Astral_single 5060 5044 -16
YEAST_KO_Astral 1341718
EWZ_2P_MBR_Exploris 247728 247560 -168
EWZ_2P_MBR_Exploris_Human 115546 115383 -163
EWZ_2P_MBR_Exploris_YeastHuman 131734 131825 +91
MacCoss_Eclipse_Normalization_noNorm 187457 188153 +696
MacCoss_Eclipse_Normalization_yesNorm 187457 188153 +696

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0006 -0.0005 +0.0007 +0.0002
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0010 -0.0004 -0.0003
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0012 -0.0008 -0.0004 -0.0008 +0.0002 -0.0001 +0.0003
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0015 -0.0015 -0.0002 -0.0020 -0.0010 -0.0008 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0013 -0.0018 -0.0003 +0.0001 +0.0008 -0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0013 -0.0009 -0.0001 +0.0001 +0.0001 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0021 -0.0017 +0.0002 -0.0004 -0.0005 +0.0003 +0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0006 -0.0007 +0.0004 +0.0013 +0.0017 -0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 0.0001 -0.0005 +0.0001
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0010 0.0004 +0.0006 +0.0002 +0.0015 -0.0000 -0.0006
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0021 -0.0031 -0.0008 -0.0001 -0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0019 0.0007 +0.0061 +0.0040 +0.0038 +0.0053 -0.0012
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0005 -0.0013 +0.0017 +0.0035 +0.0016 +0.0025 -0.0008
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0002 0.0009 +0.0011 +0.0020 +0.0044 +0.0035 +0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0010 0.0000 +0.0022 +0.0017 +0.0024 +0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0003 -0.0008 +0.0012 -0.0017 +0.0007 +0.0005 -0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0002 -0.0006 +0.0019 +0.0021 +0.0013 +0.0012 -0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 0.0005 0.0002 +0.0010 +0.0002 +0.0024 +0.0014 -0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0035 0.0011 +0.0050 +0.0051 +0.0008 +0.0063 -0.0025
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0000 0.0007 +0.0009 +0.0019 +0.0031 +0.0038 +0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0040 -0.0021 +0.0048 -0.0021 -0.0061
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0012 -0.0004 +0.0047 +0.0022 +0.0045 -0.0017
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0001 0.0002 +0.0024 +0.0012 +0.0030 +0.0028 +0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0015 0.0011 +0.0023 +0.0035 +0.0023 +0.0022 -0.0004
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0030 0.0016 +0.0029 +0.0039 +0.0051 -0.0014
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0024 0.0007 +0.0038 +0.0040 +0.0022 -0.0017
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 0.0003 +0.0029 +0.0022 +0.0017 +0.0025 +0.0012
Seer_Astral_45_Entrapment -0.0023 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0012 +0.0034 +0.0011
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0026 0.0004 0.0006 +0.0032 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0026 -0.0037 -0.0008 -0.0011
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0041 -0.0035 -0.0025 -0.0024 -0.0040 -0.0042 +0.0006
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0031 -0.0037 -0.0024 -0.0012 -0.0008 -0.0012 -0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0033 +0.0033 +0.0020 +0.0015 -0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0009 -0.0011 +0.0030 +0.0027 +0.0037 +0.0022 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0033 -0.0035 +0.0023 +0.0012 -0.0015 -0.0008 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0036 -0.0000 +0.0009 +0.0020 +0.0005
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0043 -0.0042 -0.0039 +0.0001
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0023
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0016 +0.0014 -0.0014 +0.0013 -0.0007 -0.0011
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0027
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0022 -0.0037 +0.0012 +0.0005 +0.0006 -0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0060 -0.0056 +0.0014 +0.0002 +0.0014 +0.0014 +0.0004
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0016 -0.0016 +0.0043 +0.0043 +0.0056 +0.0056 -0.0033
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0007 -0.0052 -0.0034 -0.0002 -0.0009 -0.0007 -0.0045
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0065 -0.0042 +0.0013 -0.0002 +0.0012 +0.0023
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0035 -0.0033 -0.0001 -0.0010 -0.0017 +0.0011 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0006 -0.0003 +0.0033 +0.0070 +0.0063 +0.0057 +0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0016 +0.0038 +0.0004 +0.0037 +0.0030 +0.0020
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0011 -0.0045 +0.0008 +0.0031 -0.0011 +0.0018 -0.0056
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0011 -0.0016 +0.0025 +0.0026 +0.0009 -0.0003 -0.0027
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0117 0.0000 +0.0028 +0.0000 +0.0085 +0.0000 -0.0117
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0046 0.0020 +0.0119 +0.0087 +0.0105 +0.0108 -0.0026
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0032 0.0020 +0.0056 +0.0059 +0.0006 +0.0040 -0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0000 -0.0012 +0.0008 -0.0011 +0.0039 +0.0050 -0.0012
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0024 -0.0037 +0.0005 -0.0108 -0.0057 -0.0036 -0.0061
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0018 -0.0018 +0.0027 +0.0027 -0.0010 +0.0038 -0.0036
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0002 -0.0036 +0.0024 -0.0006 -0.0010 +0.0015 -0.0033
Seer_Astral_45_Entrapment -0.0049 -0.0013
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0036 +0.0110 +0.0016
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0003 0.0000 +0.0013 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0005 -0.0005 -0.0003 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0005 -0.0004 -0.0003 -0.0007 -0.0002 -0.0003 +0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0007 +0.0002 -0.0009 -0.0004 -0.0004 -0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0009 -0.0012 -0.0002 +0.0001 +0.0002 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0007 -0.0011 -0.0007 -0.0003 -0.0001 -0.0003 -0.0004
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0015 -0.0012 -0.0004 -0.0005 -0.0005 -0.0002 +0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0004 -0.0004 +0.0004 +0.0006 +0.0010 -0.0000
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0001 -0.0002 -0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0010 0.0009 +0.0013 +0.0004 +0.0015 +0.0009 -0.0001
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0012 -0.0021 -0.0006 +0.0008 -0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 0.0007 0.0005 +0.0051 +0.0033 +0.0036 +0.0042 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0006 -0.0008 +0.0013 +0.0022 +0.0018 +0.0019 -0.0002
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0001 0.0007 +0.0006 +0.0013 +0.0035 +0.0031 +0.0006
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 -0.0002 +0.0015 +0.0008 +0.0014 +0.0007
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 0.0002 -0.0005 +0.0009 -0.0009 +0.0007 +0.0003 -0.0007
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0002 -0.0004 +0.0015 +0.0016 +0.0012 +0.0010 -0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0000 -0.0001 +0.0004 -0.0004 +0.0011 +0.0007 -0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0021 0.0011 +0.0041 +0.0038 +0.0014 +0.0043 -0.0010
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0006 0.0005 +0.0012 +0.0014 +0.0019 +0.0019 +0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0036 -0.0017 +0.0043 -0.0017 -0.0053
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0020 0.0009 +0.0046 +0.0030 +0.0039 -0.0011
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0004 0.0010 +0.0029 +0.0014 +0.0030 +0.0024 +0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0016 0.0011 +0.0027 +0.0028 +0.0029 +0.0028 -0.0005
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0033 0.0015 -0.0003 +0.0019 +0.0031 -0.0018
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0017 0.0012 +0.0037 +0.0031 +0.0022 -0.0005
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0001 0.0004 +0.0021 +0.0019 +0.0012 +0.0017 +0.0004
Seer_Astral_45_Entrapment -0.0011 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0013 +0.0035 +0.0011
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0007
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0016 0.0010 +0.0022 -0.0006
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0015 +0.0001 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0021 -0.0021 -0.0020 -0.0019 -0.0024 -0.0023 -0.0000
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0013 -0.0017 -0.0008 -0.0003 +0.0004 +0.0002 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0009 +0.0027 +0.0025 +0.0021 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 0.0001 +0.0038 +0.0022 +0.0026 +0.0014 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0015 +0.0023 +0.0020 -0.0001 +0.0001 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0026 -0.0003 +0.0001 +0.0011 -0.0004
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0022 -0.0023 -0.0019 -0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0016
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0008 -0.0013 +0.0013 -0.0020 +0.0004 +0.0003 -0.0006
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0013 -0.0030 +0.0007 -0.0008 +0.0002 -0.0017
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0045 -0.0041 +0.0007 +0.0014 +0.0017 +0.0002 +0.0004
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0005 -0.0018 +0.0026 +0.0015 +0.0022 +0.0013 -0.0024
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0005 -0.0035 -0.0010 +0.0000 +0.0005 +0.0005 -0.0029
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0041 +0.0006 -0.0010 +0.0001 +0.0008
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0026 +0.0006 -0.0013 -0.0012 -0.0001 +0.0004
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0015 -0.0013 +0.0008 +0.0033 +0.0025 +0.0020 +0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0022 +0.0017 -0.0003 +0.0016 +0.0007 +0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0017 -0.0026 +0.0013 +0.0015 -0.0006 +0.0005 -0.0042
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 0.0002 -0.0008 +0.0005 +0.0023 -0.0005 -0.0008 -0.0010
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0100 -0.0027 +0.0034 +0.0055 +0.0020 -0.0027 -0.0127
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0018 0.0021 +0.0121 +0.0089 +0.0076 +0.0068 +0.0003
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0018 0.0011 +0.0051 +0.0047 +0.0019 +0.0039 -0.0007
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0003 -0.0004 +0.0015 -0.0005 +0.0039 +0.0040 -0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0000 -0.0036 -0.0003 -0.0102 -0.0064 -0.0039 -0.0036
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0023 -0.0013 +0.0006 +0.0009 -0.0023 +0.0015 -0.0037
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0005 -0.0016 +0.0008 +0.0002 +0.0007 +0.0013 -0.0011
Seer_Astral_45_Entrapment -0.0029 -0.0000
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0036 +0.0110 +0.0016
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0024

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 6613 3086 -21309 -3527

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 174 68 -703 -106

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0263 0.0220 -0.0096 -0.0043

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 450 354 -490 -96

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -61 -20 -210 +41

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 11 +4 +1 +1 -3 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 10 +4 +0 +1 -3 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 13 +3 +0 +1 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 0 +0 +1 -1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1652 0.1644 +0.0185 +0.0223 +0.0244 +0.0270 -0.0009
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1560 0.1557 +0.0164 +0.0195 +0.0206 +0.0234 -0.0003
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1615 0.1620 +0.0165 +0.0196 +0.0212 +0.0005
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1503 0.1489 -0.0041 +0.0080 +0.0113 +0.0133 -0.0014
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1710 0.1708 +0.0010 +0.0068 +0.0092 +0.0108 -0.0003
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1463 0.1472 -0.0031 +0.0106 +0.0135 +0.0149 +0.0009
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1526 +0.0046 +0.0027 +0.0031 +0.0021 -0.0005
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1542
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5939 0.5914 +0.0045 -0.0025
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2052 0.2033 +0.0316 -0.0020

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0844 +0.0081 +0.0105 +0.0117 +0.0124 +0.0000
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0801 +0.0078 +0.0099 +0.0102 +0.0113 -0.0003
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0751 0.0741 +0.0068 +0.0081 +0.0083 -0.0010
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0648 0.0641 -0.0137 +0.0038 +0.0048 +0.0052 -0.0007
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0800 0.0794 +0.0001 +0.0037 +0.0041 +0.0021 -0.0007
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0636 0.0624 -0.0147 +0.0056 +0.0055 +0.0055 -0.0012
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0985 0.0986 -0.0043 -0.0034 -0.0051 -0.0041 +0.0001
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1017
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5812 0.5800 -0.0082 -0.0012
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1380 0.1374 +0.0141 -0.0006

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 0.0008 -0.0011 -0.0020 +0.0070 +0.0012 -0.0769 +0.0004
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0137 -0.0135 -0.0076 +0.0055 -0.0002 -0.0272 -0.0002
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0092 -0.0061 +0.0007 -0.0023 -0.0001 +0.0083 -0.0031
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0754 -0.0735 +0.0012 -0.0008 +0.0020 -0.0514 -0.0019
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0717 -0.0709 -0.0054 -0.0006 -0.0003 -0.0004 -0.0008
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0571 -0.0582 -0.0080 +0.0050 -0.0016 +0.0281 +0.0011
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0453 +0.0114 +0.0329 -0.0052 -0.0508
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1858 +0.0115 +0.0151 +0.0011 -0.0433
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1736 -0.0082 +0.0282 -0.0195 +0.1538
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0286 +0.0067 +0.0305 +0.0014 -0.0136
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3292 +0.0081 +0.0093 -0.0002 -0.0137
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1211 -0.0024 -0.0402 -0.0016 +0.0876
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2195 +0.0015 +0.0038 -0.0038 -0.0083
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2343 +0.0262 -0.0191 +0.0011 +0.0320
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1334 0.1302 -0.0059 -0.0059 +0.0211 -0.1031 -0.0032
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0845 -0.0851 +0.0062 +0.0047 -0.0191 +0.0240 +0.0006
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2000 0.2018 +0.0183 -0.0240 +0.0287 -0.0785 +0.0018
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1045 0.1036 +0.0048 -0.0054 -0.0067 +0.0163 -0.0009
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0479 +0.0009 +0.0001 -0.0089 +0.0026 -0.0003
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2158 0.2156 +0.0051 -0.0017 +0.0004 +0.0122 -0.0002
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1446 0.1458 -0.0032 -0.0062 -0.0160 +0.1222 +0.0012
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0785 -0.0800 +0.0043 -0.0045 -0.0054 -0.0235 +0.0015
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0507 0.0337 +0.0169 -0.0238 +0.0355 -0.0458 -0.0170
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0385 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0065 -0.0031 +0.0125 +0.0006 -0.0615
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0309 -0.0051 -0.0071 +0.0012 +0.0273
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0760 +0.0119 -0.0026 -0.0002 +0.0335
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0249
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0162 -0.0331 +0.0073 +0.0004 -0.0068
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0563
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1548 -0.0356 -0.0145 +0.0024 +0.0961
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1053 -0.0468 -0.0064 -0.0010 +0.0685

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0010 0.0016 +0.0009 +0.0076 -0.0005 -0.0723 +0.0005
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0150 -0.0139 -0.0089 +0.0045 +0.0004 -0.0261 -0.0011
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0001 -0.0008 +0.0054 -0.0044 +0.0010 -0.0034 +0.0006
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0770 -0.0727 +0.0013 +0.0005 -0.0055 -0.0436 -0.0043
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0699 -0.0695 -0.0060 -0.0005 -0.0005 -0.0002 -0.0004
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0489 -0.0565 -0.0084 +0.0078 -0.0007 +0.0180 +0.0076
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0544 +0.0142 +0.0365 -0.0057 -0.0359
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1346 +0.0050 +0.0043 -0.0072 -0.0288
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1874 -0.0338 -0.0246 +0.0154 +0.1702
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0229 +0.0064 +0.0290 +0.0021 -0.0296
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3048 +0.0072 +0.0066 -0.0010 -0.0008
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1116 +0.0002 -0.0402 -0.0012 +0.0829
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1028 +0.0124 -0.0135 -0.0021 +0.0517
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1962 -0.0003 +0.0009 -0.0042 +0.0005
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1989 +0.0289 -0.0188 +0.0012 +0.0186
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1590 0.1559 -0.0077 -0.0028 +0.0144 -0.0621 -0.0031
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0790 -0.0773 +0.0048 +0.0016 -0.0170 +0.0233 -0.0017
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2372 0.2341 +0.0504 -0.0481 +0.0073 -0.0282 -0.0031
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0985 0.0978 +0.0031 -0.0032 -0.0081 +0.0226 -0.0008
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0444 -0.0443 +0.0011 -0.0008 -0.0084 +0.0023 -0.0002
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2255 0.2247 +0.0036 -0.0008 +0.0016 +0.0222 -0.0008
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1259 0.1285 +0.0005 -0.0096 -0.0297 +0.1213 +0.0026
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0774 -0.0770 +0.0056 -0.0034 -0.0033 -0.0311 -0.0004
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0658 0.0607 +0.0405 -0.0089 +0.0322 -0.0515 -0.0051
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0464 +0.0258 +0.0029 -0.0003 -0.0236
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0237 -0.0049 +0.0142 +0.0054 -0.0441
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0289 -0.0001 -0.0108 +0.0000 +0.0248
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0809 +0.0137 -0.0048 +0.0001 +0.0402
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0984 -0.0232 +0.0027 +0.0012 +0.0358
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0184 -0.0350 +0.0076 +0.0002 -0.0033
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0658 +0.0131 -0.0109 +0.0003 +0.0542
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1615 -0.0435 -0.0160 +0.0023 +0.1036
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.1007 -0.0508 -0.0078 +0.0009 +0.0564

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1266 0.1193 +0.0343 +0.0202 -0.0086 -0.1812 -0.0073
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1144 0.1122 +0.0169 -0.0058 +0.0004 -0.0955 -0.0022
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1190 0.1146 +0.0117 -0.0078 +0.0011 -0.1419 -0.0043
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1431 0.1305 +0.0441 -0.0007 -0.0136 -0.1549 -0.0127
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1266 0.1248 +0.0164 -0.0031 -0.0002 -0.0926 -0.0019
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1285 0.1322 +0.0170 -0.0063 +0.0017 -0.1395 +0.0038
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1525 +0.0354 +0.0384 -0.0420 -0.4231
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2166 +0.0422 -0.0321 -0.0167 -0.1334
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3611 +0.2175 -0.0279 -0.1166 -0.8801
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1400 +0.0427 +0.0074 -0.0036 -0.1164
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2295 +0.0473 +0.0030 -0.0078 -0.1061
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1770 +0.0549 +0.0262 -0.0056 -0.2031
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1429 +0.0358 +0.0129 -0.0110 -0.1886
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1910 +0.0274 +0.0045 -0.0018 -0.0944
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1946 +0.0778 +0.0001 -0.0169 -0.3438
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1875 0.2050 +0.0445 +0.0761 -0.1281 -0.3834 +0.0175
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0485 0.0437 -0.0103 +0.0134 -0.0147 -0.1027 -0.0048
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3018 0.2803 -0.0030 +0.1483 +0.0078 -0.6557 -0.0215
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1851 0.1837 +0.0037 +0.0045 +0.0051 -0.1654 -0.0014
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0430 0.0404 +0.0676 -0.0087 -0.0168 -0.1087 -0.0026
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1860 0.1793 +0.0316 +0.0062 -0.0049 -0.1493 -0.0067
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2052 0.1858 -0.0093 +0.0378 -0.0706 -0.3716 -0.0194
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0596 0.0543 +0.0977 -0.0155 +0.0159 -0.1882 -0.0053
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4715 0.4023 +0.0737 +0.1982 -0.0827 -0.8036 -0.0692
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1056 +0.0321 -0.0450 -0.0051 -0.3770
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1288 +0.0200 -0.0293 -0.0344 -0.4130
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0783 +0.0068 -0.0387 -0.0080 -0.0284
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0871 +0.0190 -0.0584 -0.0028 -0.0649
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0977 +0.0281 -0.0478 -0.0031 -0.0967
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0885 +0.0273 -0.0601 -0.0037 -0.0455
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1008 +0.0130 -0.0614 -0.0008 -0.0842
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1632 +0.0619 -0.0455 -0.0143 -0.4108
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1083 +0.0688 -0.0494 -0.0103 -0.3888

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0570 0.0569 +0.0149 -0.0182 -0.0054 -0.0638 -0.0001
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0350 0.0356 +0.0035 +0.0005 +0.0043 -0.0465 +0.0007
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0396 0.0436 -0.0157 -0.0104 +0.0083 -0.0726 +0.0040
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0483 0.0461 -0.0042 +0.0002 -0.0084 -0.0713 -0.0022
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0383 0.0382 +0.0032 -0.0030 +0.0035 -0.0334 -0.0001
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0521 0.0493 +0.0000 +0.0073 -0.0081 -0.0733 -0.0028
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0444 +0.0402 -0.0136 +0.0467 -0.2213
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0756 +0.0316 -0.0208 -0.0112 -0.0330
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.0864 +0.1306 -0.0136 -0.0647 -0.3064
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0220 +0.0032 +0.0034 -0.0021 -0.0245
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0454 +0.0110 -0.0047 +0.0013 -0.0171
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0271 +0.0055 -0.0000 +0.0038 -0.0350
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0294 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0097
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0363 +0.0296 -0.0022 -0.0025 -0.0845
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0480 0.0498 +0.0146 +0.0452 -0.0355 -0.1797 +0.0019
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0174 0.0184 -0.0057 -0.0062 -0.0031 -0.0312 +0.0010
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0995 0.1385 -0.1294 +0.1626 +0.0090 -0.4010 +0.0390
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0336 0.0341 -0.0046 +0.0074 +0.0016 -0.0355 +0.0005
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0094 0.0093 +0.0109 -0.0066 +0.0090 -0.0340 -0.0001
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0353 0.0347 -0.0053 +0.0093 +0.0025 -0.0471 -0.0007
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0632 0.0527 -0.0166 +0.0170 -0.0166 -0.1543 -0.0105
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0192 0.0182 +0.0068 -0.0006 -0.0039 -0.0545 -0.0010
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1308 0.0950 -0.0891 -0.0032 -0.0082 -0.2996 -0.0358
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0565 +0.0682 -0.0593 -0.0056 -0.1658
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0758 +0.0668 -0.0849 -0.0031 -0.1677
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0332 +0.0113 -0.0357 +0.0198 -0.0196
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0243 -0.0054 -0.0154 +0.0040 -0.0244
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0262 -0.0011 -0.0225 +0.0112 -0.0346
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0243 +0.0094 -0.0181 -0.0013 -0.0214
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0342 -0.0134 -0.0199 -0.0090 -0.0333
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0576 +0.0271 -0.0671 +0.0055 -0.2016
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0403 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 118.1000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 13.5100 20.7600 -3.3100 +3.4400 +0.8900 +3.6300 +7.2500 -13.7516% +19.8614% +4.4791% +21.1909% +53.6640%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.4300 11.9500 -0.8000 +2.8800 +3.5900 +2.6600 +4.5200 -6.2745% +31.7530% +42.9426% +28.6329% +60.8345%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.2800 9.6600 -2.6500 +0.7000 +0 -1.1500 +2.3800 -21.5272% +7.8125% +0% -10.6383% +32.6923%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.7800 6.0600 +1.8300 +1.6500 +1.1200 +1.2800 +43.2624% +37.4150% +22.6721% +26.7782%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4000 4.8000 -0.5800 +0.4200 +0.0500 +0.2600 -0.6000 -10.7807% +9.5890% +1.0526% +5.7269% -11.1111%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.5600 5.3800 -0.0500 +1.2400 +0.9400 +0.7200 +0.8200 -0.9208% +29.9517% +21.1712% +15.4506% +17.9825%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9700 5.1500 -0.4000 +0.7300 +0.6200 +0.6900 +0.1800 -7.2072% +16.5158% +13.6865% +15.4709% +3.6217%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 48.4900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 16.6200 17.6900 -9.9700 -2.0700 -0.6300 -1.5900 +1.0700 -36.0448% -10.4757% -3.4389% -8.2469% +6.4380%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.8600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.0300 4.4800 -1.3100 -0.1100 -0.1700 +0.3900 -0.5500 -22.6252% -2.3965% -3.6559% +9.5355% -10.9344%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4200 5.0200 -1.2400 +0.6200 -0.8600 -0.4000 -19.8083% +14.0909% -14.6259% -7.3801%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.5400 5.9200 +1.4000 +2.1900 +1.1200 +2.2800 +1.3800 +30.9735% +58.7131% +23.3333% +62.6374% +30.3965%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.2100 4.0200 -1.7200 +0.5100 +0.1000 +0.5800 -0.1900 -29.9652% +14.5299% +2.5510% +16.8605% -4.5131%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.2500 6.1500 -0.9200 +0.6200 +0.6400 +0.4100 +0.9000 -13.0127% +11.2116% +11.6152% +7.1429% +17.1429%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.4100 6.2200 -1.3700 +0.4900 +0.0800 +0.6800 +0.8100 -18.0501% +8.5515% +1.3029% +12.2744% +14.9723%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2600 5.9700 -0.4800 +1.3000 +1.6700 +1.5600 +0.7100 -7.4419% +27.8373% +38.8372% +35.3741% +13.4981%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.1400 5.3300 -2.0500 +0.4000 +0.7000 -0.2900 +0.1900 -27.7778% +8.1136% +15.1188% -5.1601% +3.6965%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.7700 4.1900 -0.5500 +0.5300 +0.8000 -0.5800 -11.6034% +14.4809% +23.5988% -12.1593%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.6800 4.4600 -0.8000 +0.6200 +0.7000 -0.2200 -15.2091% +16.1458% +18.6170% -4.7009%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.8300 3.8800 -0.7700 +0.4500 +0.1700 +0.4300 +0.0500 -16.5591% +13.1195% +4.5822% +12.4638% +1.3055%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.6900 4.3800 +0.2100 +1.0900 +0.6900 +1.1100 -0.3100 +5.0360% +33.1307% +18.6992% +33.9450% -6.6098%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2300 5.1500 -0.1300 +1.6200 +1.5500 +1.6600 +0.9200 -2.4621% +45.8924% +43.0556% +47.5645% +21.7494%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.8700 4.6000 -0.9100 +0.7800 +0.4500 -0.2100 -0.2700 -16.5154% +20.4188% +10.8434% -4.3659% -5.5441%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5 4.6500 -0.0800 +1.1900 +1.0800 -0.3500 -1.6913% +34.3931% +30.2521% -7.0000%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.5400 5.0400 +0.3900 +1.4200 +1.3100 +1.2600 +0.5000 +8.3871% +39.2265% +35.1206% +33.3333% +11.0132%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5000 7.9300 -1.1100 +1.3800 +1.8300 +0.4300 -12.2788% +21.0687% +30.0000% +5.7333%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 67.1900
Seer_Astral_single 4.4700 4.1400 5.5800 5.8300 5.6800 +1.2100 +1.5400 +0.1000 -0.1500 +27.0694% +37.1981% +1.7921% -2.5729%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 148
EWZ_2P_MBR_Exploris 26.1800 19.1700 26.8600 +0.6800 +7.6900 +2.5974% +40.1148%
EWZ_2P_MBR_Exploris_Human 12.9100 11.3400 13.8400 +0.9300 +2.5000 +7.2037% +22.0459%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.8500 14.6700 +2.6100 +2.8200 +21.6418% +23.7975%
MacCoss_Eclipse_Normalization_noNorm 27.5100 27.3400 31.2000 +3.6900 +3.8600 +13.4133% +14.1185%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.1700 31.3200 +3.6500 +3.1500 +13.1912% +11.1821%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png