Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6656655
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1292235 1296412 +199918 -10593 -15543 +2871 +4177 +18.2325% -0.8105% -1.1847% +0.2219% +0.3232%
MTAC_3P_Alternating 586322 615762 610710 599881 621395 631581 +45259 +15819 +20871 +31700 +10186 +7.7191% +2.5690% +3.4175% +5.2844% +1.6392%
MTAC_3P_Standard 596590 623022 617574 607435 625424 636070 +39480 +13048 +18496 +28635 +10646 +6.6176% +2.0943% +2.9949% +4.7141% +1.7022%
MTAC_Yeast_Alternating_3min 137548 136839 135560 145706 148108 +10560 +11269 +12548 +2402 +7.6773% +8.2352% +9.2564% +1.6485%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 164379 167665 +12024 +11114 +11156 +12630 +3286 +7.7255% +7.0993% +7.1280% +8.1465% +1.9990%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 148110 150081 +11572 +10696 +10789 +12196 +1971 +8.3547% +7.6737% +7.7456% +8.8451% +1.3308%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 165591 168986 +10024 +10254 +9826 +11064 +3395 +6.3059% +6.4599% +6.1737% +7.0060% +2.0502%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3412790
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1319303 1327416 +304680 +172747 +203543 +143332 +8113 +29.7907% +14.9607% +18.1109% +12.1049% +0.6149%
SCIEX_3P 672242 749525 722698 714454 743897
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 53263 53912 +13030 +12212 +11487 +11812 +649 +31.8722% +29.2854% +27.0760% +28.0570% +1.2185%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 51247 51237 +10168 +8835 +9214 +10085 -10 +24.7583% +20.8363% +21.9261% +24.5067% -0.0195%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 42044 42640 +33900 +19525 +19625 +19727 +596 +387.8719% +84.4690% +85.2705% +86.0952% +1.4176%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 28680 28790 +11855 +11237 +10381 +10442 +110 +70.0030% +64.0175% +56.3909% +56.9108% +0.3835%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 114502 115071 +15163 +12180 +16088 +16423 +569 +15.1770% +11.8378% +16.2533% +16.6481% +0.4969%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 85070 85942 +14844 +13214 +14497 +14816 +872 +20.8782% +18.1691% +20.2911% +20.8306% +1.0250%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 123935 123762 +18058 +17265 +18140 +19328 -173 +17.0836% +16.2117% +17.1745% +18.5074% -0.1396%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 128906 130289 +15132 +12973 +15967 +17208 +1383 +13.1403% +11.0582% +13.9667% +15.2174% +1.0729%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 18714 18579 +8385 +7773 +7341 +7346 -135 +82.2543% +71.9323% +65.3230% +65.3966% -0.7214%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 20673 20171 +5364 +4738 +4130 +4472 -502 +36.2261% +30.7004% +25.7465% +28.4859% -2.4283%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 8726 8855 +7594 +6823 +6405 +6469 +129 +602.2205% +335.7776% +261.4286% +271.1232% +1.4783%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16166 15731 +14295 +10948 +10041 +10000 -435 +995.4735% +228.8940% +176.4675% +174.4896% -2.6908%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 32026 32246 +10536 +10351 +9666 +9783 +220 +48.5306% +47.2756% +42.8078% +43.5516% +0.6869%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 32256 31918 +6058 +5775 +5658 +6293 -338 +23.4261% +22.0900% +21.5461% +24.5580% -1.0479%
SCP_Astral_500pg_3ms 3484 6898 6834 19322 20087 +16603 +13189 +13253 +765 +476.5499% +191.2003% +193.9274% +3.9592%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 28202 28578 +17879 +17104 +15696 +15689 +376 +167.1091% +149.0675% +121.8444% +121.7240% +1.3332%
SCP_Astral_MBR 92167 93585 91884 90864 108777 109432 +17265 +15847 +17548 +18568 +655 +18.7323% +16.9333% +19.0980% +20.4349% +0.6021%
Seer_Astral_45 2512737 3124006 3135497 2971207 3001003
Seer_Astral_single 56699 55793 55891 60660 61134 +4435 +5341 +5243 +474 +7.8220% +9.5729% +9.3808% +0.7814%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17275427
EWZ_2P_MBR_Exploris 1776128 1865977 1892416 +116288 +26439 +6.5473% +1.4169%
EWZ_2P_MBR_Exploris_Human 836809 881569 891466 +54657 +9897 +6.5316% +1.1227%
EWZ_2P_MBR_Exploris_YeastHuman 914924 977795 989548 +74624 +11753 +8.1563% +1.2020%
MacCoss_Eclipse_Normalization_noNorm 2078034 2247711 2272818 +194784 +25107 +9.3735% +1.1170%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2247711 2272818 +194784 +25107 +9.3735% +1.1170%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 107890
KEAP1KO_Eclipse 111504 133619 131359 132031 148329 148210 +36706 +14591 +16851 +16179 -119 +32.9190% +10.9199% +12.8282% +12.2539% -0.0802%
MTAC_3P_Alternating 108267 117352 114659 114816 123799 124108 +15841 +6756 +9449 +9292 +309 +14.6314% +5.7570% +8.2410% +8.0929% +0.2496%
MTAC_3P_Standard 110265 118693 115800 116148 124703 125444 +15179 +6751 +9644 +9296 +741 +13.7659% +5.6878% +8.3282% +8.0036% +0.5942%
MTAC_Yeast_Alternating_3min 48858 49032 48995 55378 55481 +6623 +6449 +6486 +103 +13.5556% +13.1526% +13.2381% +0.1860%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 61497 62337 +8368 +7262 +6497 +6453 +840 +15.5052% +13.1857% +11.6350% +11.5471% +1.3659%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 56180 56679 +8058 +7014 +6390 +6219 +499 +16.5731% +14.1226% +12.7066% +12.3246% +0.8882%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 62196 62665 +7605 +6746 +5958 +5838 +469 +13.8122% +12.0639% +10.5066% +10.2733% +0.7541%
Olsen_Astral_3P 198770 231103 234505 234149 239695
Olsen_Exploris_3P 51272 58784 55047 58593 72007 71888 +20616 +13104 +16841 +13295 -119 +40.2091% +22.2918% +30.5939% +22.6904% -0.1653%
SCIEX_3P 82206 93920 87927 87858 102130
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 20401 20466 +6026 +5508 +5217 +4759 +65 +41.7313% +36.8231% +34.2121% +30.2986% +0.3186%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 19303 19157 +4674 +4092 +4241 +4087 -146 +32.2723% +27.1623% +28.4326% +27.1201% -0.7564%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 17210 17292 +8552 +7916 +7903 +7928 +82 +97.8490% +84.4283% +84.1730% +84.6647% +0.4765%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 16380 16447 +7549 +7188 +6663 +6637 +67 +84.8393% +77.6326% +68.1010% +67.6555% +0.4090%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 41662 41814 +6949 +5517 +7472 +7389 +152 +19.9312% +15.1996% +21.7576% +21.4641% +0.3648%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 31075 31246 +6597 +5780 +6127 +6023 +171 +26.7638% +22.6969% +24.3919% +23.8790% +0.5503%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 45956 45989 +9301 +8313 +8340 +8568 +33 +25.3516% +22.0644% +22.1520% +22.8962% +0.0718%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 46670 47317 +7161 +5772 +7274 +7424 +647 +17.8330% +13.8934% +18.1655% +18.6098% +1.3863%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7634 7558 +3892 +3609 +3349 +3312 -76 +106.1648% +91.3902% +79.5676% +78.0028% -0.9955%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8261 8078 +2779 +2467 +2223 +2012 -183 +52.4439% +43.9672% +37.9675% +33.1685% -2.2152%
SCP_Astral_250pg_3ms 675 721 908 879 4172 4123 +3448 +3402 +3215 +3244 -49 +510.8148% +471.8447% +354.0749% +369.0557% -1.1745%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6891 6572 +5136 +4834 +4427 +4409 -319 +357.6602% +278.1358% +206.3869% +203.8373% -4.6292%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 12669 12680 +4886 +4708 +4428 +4274 +11 +62.6892% +59.0567% +53.6597% +50.8446% +0.0868%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 12395 12132 +2974 +2790 +2761 +2718 -263 +32.4743% +29.8651% +29.4632% +28.8719% -2.1218%
SCP_Astral_500pg_3ms 1846 2600 2586 8323 8640 +6794 +6040 +6054 +317 +368.0390% +232.3077% +234.1067% +3.8087%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 11257 11427 +7553 +7272 +6653 +6622 +170 +194.9664% +175.0181% +139.3590% +137.8148% +1.5102%
SCP_Astral_MBR 24110 24991 24570 24544 30152 30334 +6224 +5343 +5764 +5790 +182 +25.8150% +21.3797% +23.4595% +23.5903% +0.6036%
Seer_Astral_45 69584 90103 87204 87620 91412
Seer_Astral_single 56699 55793 55891 60660 61134 +4435 +5341 +5243 +474 +7.8220% +9.5729% +9.3808% +0.7814%
YEAST_KO_Astral 66823 87888 87428 86498 85126
EWZ_2P_MBR_Exploris 55271 61651 61390 +6119 -261 +11.0709% -0.4234%
EWZ_2P_MBR_Exploris_Human 48465 53608 53458 +4993 -150 +10.3023% -0.2798%
EWZ_2P_MBR_Exploris_YeastHuman 51246 57183 57255 +6009 +72 +11.7258% +0.1259%
MacCoss_Eclipse_Normalization_noNorm 73278 79190 79033 +5755 -157 +7.8537% -0.1983%
MacCoss_Eclipse_Normalization_yesNorm 73278 79190 79033 +5755 -157 +7.8537% -0.1983%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 604895
KEAP1KO_Eclipse 87920 92888 93982 93441 90649 90291 +2371 -2597 -3691 -3150 -358 +2.6968% -2.7958% -3.9273% -3.3711% -0.3949%
MTAC_3P_Alternating 63773 63974 63611 63015 65375 65807 +2034 +1833 +2196 +2792 +432 +3.1894% +2.8652% +3.4522% +4.4307% +0.6608%
MTAC_3P_Standard 64317 64464 64219 63385 65743 66229 +1912 +1765 +2010 +2844 +486 +2.9728% +2.7380% +3.1299% +4.4869% +0.7392%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12589 12677 +610 +707 +737 +88 +5.0551% +5.9064% +6.1725% +0.6990%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12877 12943 +511 +472 +581 +615 +66 +4.1104% +3.7848% +4.6999% +4.9886% +0.5125%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12568 12576 +568 +529 +616 +608 +8 +4.7302% +4.3911% +5.1505% +5.0802% +0.0637%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12961 13012 +451 +547 +535 +602 +51 +3.5905% +4.3883% +4.2879% +4.8509% +0.3935%
Olsen_Astral_3P 236395 245756 242430 240719 238322
Olsen_Exploris_3P 146224 153534 153990 155827 156821 157200 +10976 +3666 +3210 +1373 +379 +7.5063% +2.3877% +2.0846% +0.8811% +0.2417%
SCIEX_3P 70810 74366 72157 71550 73551
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 11410 11605 +2442 +2077 +2020 +2271 +195 +26.6507% +21.7989% +21.0746% +24.3304% +1.7090%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11205 11284 +1986 +1523 +1872 +1731 +79 +21.3594% +15.6029% +19.8895% +18.1200% +0.7050%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 9023 9201 +6751 +3117 +2954 +3085 +178 +275.5510% +51.2327% +47.2867% +50.4415% +1.9727%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6458 6571 +1868 +1983 +1613 +1648 +113 +39.7193% +43.2214% +32.5333% +33.4755% +1.7498%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17253 17289 +1099 +1009 +1264 +1234 +36 +6.7881% +6.1978% +7.8877% +7.6861% +0.2087%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14759 14827 +1228 +986 +1139 +1156 +68 +9.0301% +7.1238% +8.3212% +8.4559% +0.4607%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 17489 17521 +1269 +1245 +1404 +1596 +32 +7.8083% +7.6493% +8.7113% +10.0220% +0.1830%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18141 18235 +1218 +1057 +1322 +1490 +94 +7.1575% +6.1532% +7.8165% +8.8982% +0.5182%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5202 5284 +1637 +1371 +1420 +1745 +82 +44.8862% +35.0371% +36.7495% +49.3077% +1.5763%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5561 5412 +1112 +809 +615 +435 -149 +25.8605% +17.5755% +12.8205% +8.7402% -2.6794%
SCP_Astral_250pg_3ms 576 22 936 741 2775 2926 +2350 +2904 +1990 +2185 +151 +407.9861% +13200% +212.6068% +294.8718% +5.4414%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4489 4114 +3477 +2034 +2085 +2068 -375 +545.8399% +97.7885% +102.7600% +101.0753% -8.3538%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7731 7973 +1728 +1627 +1957 +1846 +242 +27.6701% +25.6382% +32.5299% +30.1289% +3.1303%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8125 8058 +1336 +1329 +1046 +1035 -67 +19.8750% +19.7503% +14.9173% +14.7373% -0.8246%
SCP_Astral_500pg_3ms 982 2365 2177 5275 5289 +4307 +2924 +3112 +14 +438.5947% +123.6364% +142.9490% +0.2654%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7102 7266 +3558 +3259 +3221 +3348 +164 +95.9547% +81.3327% +79.6292% +85.4518% +2.3092%
SCP_Astral_MBR 20165 20129 20074 19793 20566 20610 +445 +481 +536 +817 +44 +2.2068% +2.3896% +2.6701% +4.1277% +0.2139%
Seer_Astral_45 225377 241455 241952 237727 233436
Seer_Astral_single 4685 4700 4632 5060 5031 +346 +331 +399 -29 +7.3853% +7.0426% +8.6140% -0.5731%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1341725
EWZ_2P_MBR_Exploris 245259 247748 247952 +2693 +204 +1.0980% +0.0823%
EWZ_2P_MBR_Exploris_Human 115447 115558 115523 +76 -35 +0.0658% -0.0303%
EWZ_2P_MBR_Exploris_YeastHuman 128968 131740 131854 +2886 +114 +2.2378% +0.0865%
MacCoss_Eclipse_Normalization_noNorm 178174 187459 187559 +9385 +100 +5.2673% +0.0533%
MacCoss_Eclipse_Normalization_yesNorm 178174 187459 187559 +9385 +100 +5.2673% +0.0533%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6423
KEAP1KO_Eclipse 7845 8175 8155 8203 8439 8383 +538 +208 +228 +180 -56 +6.8579% +2.5443% +2.7958% +2.1943% -0.6636%
MTAC_3P_Alternating 11361 11494 11351 11338 12050 12128 +767 +634 +777 +790 +78 +6.7512% +5.5159% +6.8452% +6.9677% +0.6473%
MTAC_3P_Standard 11473 11560 11477 11396 12069 12133 +660 +573 +656 +737 +64 +5.7526% +4.9567% +5.7158% +6.4672% +0.5303%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4390 4405 +277 +313 +305 +15 +6.7103% +7.6491% +7.4390% +0.3417%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4457 4461 +246 +213 +243 +247 +4 +5.8363% +5.0141% +5.7610% +5.8614% +0.0897%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4358 4372 +297 +238 +282 +275 +14 +7.2883% +5.7571% +6.8949% +6.7122% +0.3212%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4452 4470 +221 +233 +226 +239 +18 +5.2012% +5.4992% +5.3252% +5.6488% +0.4043%
Olsen_Astral_3P 13820 14378 14293 14296 14585
Olsen_Exploris_3P 7255 7582 7340 7479 7941 7931 +676 +349 +591 +452 -10 +9.3177% +4.6030% +8.0518% +6.0436% -0.1259%
SCIEX_3P 8652 9109 8679 8618 9438
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4115 4182 +937 +793 +771 +864 +67 +28.8752% +23.3992% +22.6033% +26.0398% +1.6282%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4006 4018 +764 +585 +727 +584 +12 +23.4788% +17.0405% +22.0905% +17.0064% +0.2996%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3337 3469 +1019 +1073 +1019 +1072 +132 +41.5918% +44.7830% +41.5918% +44.7226% +3.9556%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3456 3543 +1035 +1107 +909 +901 +87 +41.2679% +45.4433% +34.5103% +34.1030% +2.5174%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6011 6026 +447 +370 +522 +480 +15 +8.0122% +6.5417% +9.4840% +8.6549% +0.2495%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5220 5186 +465 +348 +403 +375 -34 +9.8496% +7.1931% +8.4257% +7.7946% -0.6513%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6134 6157 +546 +502 +561 +604 +23 +9.7309% +8.8771% +10.0250% +10.8770% +0.3750%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6326 6369 +523 +420 +526 +564 +43 +8.9463% +7.0600% +9.0022% +9.7158% +0.6797%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1985 1973 +681 +549 +567 +685 -12 +52.7090% +38.5534% +40.3272% +53.1832% -0.6045%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2003 1958 +390 +298 +200 +85 -45 +24.8724% +17.9518% +11.3766% +4.5382% -2.2466%
SCP_Astral_250pg_3ms 307 8 350 283 1162 1230 +923 +1222 +880 +947 +68 +300.6515% +15275% +251.4286% +334.6290% +5.8520%
SCP_Astral_250pg_6ms 637 756 751 766 1745 1588 +951 +832 +837 +822 -157 +149.2936% +110.0529% +111.4514% +107.3107% -8.9971%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2853 2941 +734 +666 +772 +711 +88 +33.2578% +29.2747% +35.5924% +31.8834% +3.0845%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2975 2944 +541 +556 +467 +405 -31 +22.5135% +23.2831% +18.8535% +15.9512% -1.0420%
SCP_Astral_500pg_3ms 525 902 828 2072 2056 +1531 +1154 +1228 -16 +291.6190% +127.9379% +148.3092% -0.7722%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2624 2714 +1396 +1267 +1228 +1279 +90 +105.9181% +87.5605% +82.6380% +89.1289% +3.4299%
SCP_Astral_MBR 4708 4720 4712 4715 5024 5006 +298 +286 +294 +291 -18 +6.3297% +6.0593% +6.2394% +6.1718% -0.3583%
Seer_Astral_45 5802 6297 6122 6133 6231
Seer_Astral_single 4685 4700 4632 5060 5031 +346 +331 +399 -29 +7.3853% +7.0426% +8.6140% -0.5731%
YEAST_KO_Astral 4565 4795 4676 4673 4737
EWZ_2P_MBR_Exploris 7041 7234 7252 +211 +18 +2.9967% +0.2488%
EWZ_2P_MBR_Exploris_Human 6167 6252 6230 +63 -22 +1.0216% -0.3519%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7138 7172 +285 +34 +4.1382% +0.4763%
MacCoss_Eclipse_Normalization_noNorm 5804 6247 6207 +403 -40 +6.9435% -0.6403%
MacCoss_Eclipse_Normalization_yesNorm 5804 6247 6207 +403 -40 +6.9435% -0.6403%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 604890
KEAP1KO_Eclipse 90611 90257 -354
MTAC_3P_Alternating 65364 65806 +442
MTAC_3P_Standard 65728 66212 +484
MTAC_Yeast_Alternating_3min 12579 12674 +95
MTAC_Yeast_Alternating_5min 12857 12929 +72
MTAC_Yeast_Standard_3min 12560 12569 +9
MTAC_Yeast_Standard_5min 12943 13011 +68
Olsen_Astral_3P 238278
Olsen_Exploris_3P 156819 157197 +378
SCIEX_3P 73546
SCP_Astral_1000pg_12ms 11409 11603 +194
SCP_Astral_1000pg_24ms 11204 11284 +80
SCP_Astral_1000pg_3ms 9020 9196 +176
SCP_Astral_1000pg_6ms 6450 6559 +109
SCP_Astral_10ng_12ms 17249 17286 +37
SCP_Astral_10ng_24ms 14758 14827 +69
SCP_Astral_10ng_3ms 17484 17518 +34
SCP_Astral_10ng_6ms 18141 18231 +90
SCP_Astral_250pg_12ms 5202 5282 +80
SCP_Astral_250pg_24ms 5557 5412 -145
SCP_Astral_250pg_3ms 2770 2926 +156
SCP_Astral_250pg_6ms 4489 4112 -377
SCP_Astral_500pg_12ms 7729 7973 +244
SCP_Astral_500pg_24ms 8124 8058 -66
SCP_Astral_500pg_3ms 5272 5286 +14
SCP_Astral_500pg_6ms 7098 7264 +166
SCP_Astral_MBR 20564 20610 +46
Seer_Astral_45 233431
Seer_Astral_single 5060 5031 -29
YEAST_KO_Astral 1341718
EWZ_2P_MBR_Exploris 247728 247925 +197
EWZ_2P_MBR_Exploris_Human 115546 115513 -33
EWZ_2P_MBR_Exploris_YeastHuman 131734 131848 +114
MacCoss_Eclipse_Normalization_noNorm 187457 187557 +100
MacCoss_Eclipse_Normalization_yesNorm 187457 187557 +100

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0006 -0.0004 +0.0008 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0007 -0.0001 -0.0000
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0012 -0.0010 -0.0005 -0.0009 +0.0000 -0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0015 -0.0012 +0.0002 -0.0017 -0.0006 -0.0005 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0013 -0.0018 -0.0003 +0.0001 +0.0008 -0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0011 -0.0007 +0.0002 +0.0003 +0.0004 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0021 -0.0015 +0.0003 -0.0002 -0.0003 +0.0005 +0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0006 -0.0005 +0.0005 +0.0015 +0.0019 +0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 -0.0002 -0.0008 -0.0001
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0010 -0.0001 +0.0000 -0.0004 +0.0010 -0.0006 -0.0012
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0021 -0.0018 +0.0005 +0.0012 +0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0019 0.0006 +0.0059 +0.0038 +0.0037 +0.0052 -0.0014
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0005 -0.0009 +0.0021 +0.0038 +0.0020 +0.0029 -0.0004
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0002 0.0004 +0.0007 +0.0015 +0.0040 +0.0030 +0.0006
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0010 -0.0004 +0.0018 +0.0013 +0.0020 +0.0007
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0003 -0.0010 +0.0011 -0.0019 +0.0005 +0.0003 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0002 -0.0011 +0.0014 +0.0016 +0.0008 +0.0007 -0.0009
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 0.0005 -0.0005 +0.0003 -0.0006 +0.0016 +0.0007 -0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0035 0.0022 +0.0061 +0.0062 +0.0019 +0.0074 -0.0013
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0000 0.0006 +0.0008 +0.0017 +0.0030 +0.0037 +0.0006
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0040 -0.0014 +0.0055 -0.0014 -0.0054
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0012 0.0016 +0.0067 +0.0042 +0.0065 +0.0003
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0001 0.0002 +0.0024 +0.0012 +0.0030 +0.0028 +0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0015 0.0005 +0.0017 +0.0029 +0.0017 +0.0016 -0.0010
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0030 0.0036 +0.0049 +0.0059 +0.0071 +0.0006
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0024 0.0019 +0.0050 +0.0052 +0.0034 -0.0005
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 0.0004 +0.0030 +0.0023 +0.0018 +0.0026 +0.0012
Seer_Astral_45_Entrapment -0.0023 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0007 +0.0029 +0.0005
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0026 0.0004 -0.0001 +0.0025 -0.0006
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0026 -0.0024 +0.0005 +0.0001
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0041 -0.0039 -0.0029 -0.0029 -0.0045 -0.0047 +0.0002
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0031 -0.0032 -0.0019 -0.0007 -0.0003 -0.0007 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0049 +0.0016 +0.0003 -0.0002 -0.0021
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0009 -0.0014 +0.0028 +0.0025 +0.0035 +0.0020 -0.0004
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0033 -0.0037 +0.0021 +0.0010 -0.0018 -0.0010 -0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0014 +0.0022 +0.0032 +0.0042 +0.0027
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0043 -0.0042 -0.0039 +0.0001
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0023
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0018 +0.0011 -0.0017 +0.0010 -0.0009 -0.0013
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0027
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0022 -0.0042 +0.0007 +0.0000 +0.0001 -0.0019
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0060 -0.0069 +0.0001 -0.0011 +0.0001 +0.0001 -0.0009
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0016 -0.0013 +0.0046 +0.0046 +0.0059 +0.0059 -0.0029
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0007 -0.0035 -0.0017 +0.0015 +0.0008 +0.0010 -0.0028
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0065 -0.0047 +0.0007 -0.0008 +0.0006 +0.0018
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0035 -0.0035 -0.0003 -0.0012 -0.0019 +0.0010 +0.0000
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0006 -0.0010 +0.0027 +0.0063 +0.0056 +0.0051 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0026 +0.0028 -0.0007 +0.0027 +0.0020 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0011 -0.0023 +0.0031 +0.0054 +0.0012 +0.0041 -0.0034
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0011 -0.0006 +0.0036 +0.0036 +0.0020 +0.0007 -0.0016
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0117 0.0033 +0.0060 +0.0033 +0.0118 +0.0033 -0.0084
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0046 0.0023 +0.0121 +0.0089 +0.0107 +0.0110 -0.0024
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0032 0.0038 +0.0074 +0.0078 +0.0024 +0.0059 +0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0000 -0.0024 -0.0004 -0.0023 +0.0027 +0.0037 -0.0024
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0024 0.0018 +0.0059 -0.0053 -0.0002 +0.0019 -0.0006
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0018 0.0009 +0.0054 +0.0054 +0.0017 +0.0065 -0.0009
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0002 -0.0004 +0.0055 +0.0026 +0.0021 +0.0046 -0.0002
Seer_Astral_45_Entrapment -0.0049 -0.0013
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0029 +0.0103 +0.0008
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0003 0.0002 +0.0014 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0005 -0.0004 -0.0001 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0005 -0.0004 -0.0002 -0.0006 -0.0001 -0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0005 +0.0004 -0.0007 -0.0001 -0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0009 -0.0011 -0.0001 +0.0002 +0.0003 -0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0007 -0.0008 -0.0004 -0.0000 +0.0002 +0.0000 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0015 -0.0012 -0.0004 -0.0005 -0.0004 -0.0002 +0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0004 -0.0001 +0.0007 +0.0009 +0.0014 +0.0003
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0003 +0.0000 +0.0000
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0010 0.0007 +0.0011 +0.0002 +0.0013 +0.0007 -0.0003
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0012 -0.0017 -0.0002 +0.0012 -0.0005
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 0.0007 0.0000 +0.0046 +0.0028 +0.0031 +0.0037 -0.0007
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0006 -0.0004 +0.0016 +0.0025 +0.0021 +0.0022 +0.0002
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0001 0.0009 +0.0007 +0.0015 +0.0036 +0.0033 +0.0008
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 -0.0005 +0.0012 +0.0005 +0.0011 +0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 0.0002 -0.0004 +0.0009 -0.0008 +0.0008 +0.0004 -0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0002 -0.0009 +0.0010 +0.0011 +0.0006 +0.0005 -0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0000 -0.0009 -0.0004 -0.0011 +0.0003 -0.0001 -0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0021 0.0018 +0.0048 +0.0045 +0.0021 +0.0050 -0.0003
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0006 0.0012 +0.0019 +0.0020 +0.0025 +0.0026 +0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0036 -0.0011 +0.0049 -0.0011 -0.0047
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0020 0.0014 +0.0051 +0.0035 +0.0044 -0.0006
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0004 -0.0001 +0.0018 +0.0003 +0.0019 +0.0013 -0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0016 0.0009 +0.0025 +0.0026 +0.0026 +0.0025 -0.0007
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0033 0.0039 +0.0020 +0.0042 +0.0054 +0.0006
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0017 0.0021 +0.0047 +0.0040 +0.0031 +0.0004
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0001 0.0004 +0.0022 +0.0019 +0.0012 +0.0017 +0.0005
Seer_Astral_45_Entrapment -0.0011 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0007 +0.0029 +0.0005
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0007
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0016 0.0010 +0.0022 -0.0006
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0014 +0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0021 -0.0018 -0.0017 -0.0016 -0.0021 -0.0020 +0.0003
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0013 -0.0015 -0.0007 -0.0001 +0.0006 +0.0003 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0018 +0.0018 +0.0016 +0.0012 -0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0008 +0.0029 +0.0013 +0.0017 +0.0005 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0021 +0.0017 +0.0014 -0.0008 -0.0006 -0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0019 +0.0004 +0.0008 +0.0018 +0.0003
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0022 -0.0020 -0.0015 +0.0002
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0016
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0008 -0.0010 +0.0016 -0.0017 +0.0007 +0.0006 -0.0003
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0013 -0.0034 +0.0003 -0.0011 -0.0002 -0.0021
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0045 -0.0042 +0.0007 +0.0014 +0.0016 +0.0001 +0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0005 -0.0007 +0.0037 +0.0026 +0.0033 +0.0024 -0.0013
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0005 -0.0033 -0.0008 +0.0002 +0.0007 +0.0007 -0.0027
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0040 +0.0007 -0.0009 +0.0002 +0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0026 +0.0006 -0.0013 -0.0012 -0.0001 +0.0004
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0015 -0.0015 +0.0006 +0.0031 +0.0022 +0.0017 +0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0028 +0.0011 -0.0009 +0.0010 +0.0001 +0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0017 -0.0021 +0.0018 +0.0020 -0.0001 +0.0010 -0.0037
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 0.0002 0.0012 +0.0025 +0.0044 +0.0015 +0.0013 +0.0010
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0100 0.0041 +0.0101 +0.0123 +0.0088 +0.0041 -0.0059
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0018 0.0026 +0.0126 +0.0094 +0.0081 +0.0073 +0.0007
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0018 0.0020 +0.0060 +0.0055 +0.0027 +0.0047 +0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0003 -0.0004 +0.0015 -0.0005 +0.0039 +0.0040 -0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0000 0.0016 +0.0048 -0.0051 -0.0012 +0.0013 +0.0016
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0023 -0.0000 +0.0020 +0.0022 -0.0009 +0.0028 -0.0023
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0005 -0.0004 +0.0020 +0.0014 +0.0019 +0.0025 +0.0001
Seer_Astral_45_Entrapment -0.0029 -0.0000
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0033 +0.0107 +0.0013
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0024

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 6613 11402 -12993 +4789

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 174 182 -589 +8

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0263 0.0160 -0.0156 -0.0103

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 450 575 -269 +125

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -61 43 -147 +104

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0.0748 -0.1503 +0.0748

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 12 +4 +1 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 11 +4 +0 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 13 +3 +0 +1 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 0 +0 +1 -1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1652 0.1658 +0.0199 +0.0238 +0.0258 +0.0285 +0.0006
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1560 0.1552 +0.0159 +0.0189 +0.0200 +0.0228 -0.0009
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1615 0.1605 +0.0150 +0.0181 +0.0197 -0.0010
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1503 0.1487 -0.0043 +0.0078 +0.0111 +0.0131 -0.0016
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1710 0.1711 +0.0014 +0.0072 +0.0096 +0.0112 +0.0001
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1463 0.1470 -0.0033 +0.0104 +0.0133 +0.0147 +0.0007
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1532 +0.0052 +0.0033 +0.0037 +0.0027 +0.0001
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1542
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5939 0.5917 +0.0048 -0.0022
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2052 0.2030 +0.0314 -0.0022

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0843 +0.0080 +0.0104 +0.0116 +0.0123 -0.0001
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0791 +0.0068 +0.0089 +0.0092 +0.0103 -0.0013
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0751 0.0734 +0.0061 +0.0074 +0.0076 -0.0017
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0648 0.0636 -0.0142 +0.0033 +0.0044 +0.0048 -0.0012
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0800 0.0789 -0.0003 +0.0033 +0.0036 +0.0016 -0.0011
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0636 0.0622 -0.0148 +0.0055 +0.0053 +0.0054 -0.0013
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0985 0.0987 -0.0042 -0.0033 -0.0050 -0.0040 +0.0002
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1017
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5812 0.5806 -0.0075 -0.0006
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1380 0.1365 +0.0132 -0.0015

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 0.0008 -0.0032 -0.0020 +0.0070 +0.0012 -0.0769 +0.0025
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0137 -0.0157 -0.0076 +0.0055 -0.0002 -0.0272 +0.0020
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0092 -0.0090 +0.0007 -0.0023 -0.0001 +0.0083 -0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0754 -0.0829 +0.0012 -0.0008 +0.0020 -0.0514 +0.0075
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0717 -0.0702 -0.0054 -0.0006 -0.0003 -0.0004 -0.0015
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0571 -0.0495 -0.0080 +0.0050 -0.0016 +0.0281 -0.0076
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0453 +0.0114 +0.0329 -0.0052 -0.0508
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1858 +0.0115 +0.0151 +0.0011 -0.0433
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1736 -0.0082 +0.0282 -0.0195 +0.1538
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0286 +0.0067 +0.0305 +0.0014 -0.0136
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3292 +0.0081 +0.0093 -0.0002 -0.0137
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1211 -0.0024 -0.0402 -0.0016 +0.0876
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2195 +0.0015 +0.0038 -0.0038 -0.0083
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2343 +0.0262 -0.0191 +0.0011 +0.0320
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1334 0.1287 -0.0059 -0.0059 +0.0211 -0.1031 -0.0046
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0845 -0.0860 +0.0062 +0.0047 -0.0191 +0.0240 +0.0015
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2000 0.2015 +0.0183 -0.0240 +0.0287 -0.0785 +0.0015
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1045 0.1031 +0.0048 -0.0054 -0.0067 +0.0163 -0.0014
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0482 +0.0009 +0.0001 -0.0089 +0.0026 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2158 0.2151 +0.0051 -0.0017 +0.0004 +0.0122 -0.0006
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1446 0.1435 -0.0032 -0.0062 -0.0160 +0.1222 -0.0012
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0785 -0.0805 +0.0043 -0.0045 -0.0054 -0.0235 +0.0021
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0507 0.0435 +0.0169 -0.0238 +0.0355 -0.0458 -0.0071
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0385 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0065 -0.0031 +0.0125 +0.0006 -0.0615
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0309 -0.0051 -0.0071 +0.0012 +0.0273
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0760 +0.0119 -0.0026 -0.0002 +0.0335
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0249
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0162 -0.0331 +0.0073 +0.0004 -0.0068
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0563
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1548 -0.0356 -0.0145 +0.0024 +0.0961
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1053 -0.0468 -0.0064 -0.0010 +0.0685

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0010 -0.0009 +0.0009 +0.0076 -0.0005 -0.0723 -0.0002
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0150 -0.0141 -0.0089 +0.0045 +0.0004 -0.0261 -0.0009
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0001 -0.0042 +0.0054 -0.0044 +0.0010 -0.0034 +0.0041
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0770 -0.0856 +0.0013 +0.0005 -0.0055 -0.0436 +0.0086
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0699 -0.0713 -0.0060 -0.0005 -0.0005 -0.0002 +0.0014
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0489 -0.0443 -0.0084 +0.0078 -0.0007 +0.0180 -0.0046
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0544 +0.0142 +0.0365 -0.0057 -0.0359
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1346 +0.0050 +0.0043 -0.0072 -0.0288
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1874 -0.0338 -0.0246 +0.0154 +0.1702
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0229 +0.0064 +0.0290 +0.0021 -0.0296
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3048 +0.0072 +0.0066 -0.0010 -0.0008
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1116 +0.0002 -0.0402 -0.0012 +0.0829
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1028 +0.0124 -0.0135 -0.0021 +0.0517
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1962 -0.0003 +0.0009 -0.0042 +0.0005
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1989 +0.0289 -0.0188 +0.0012 +0.0186
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1590 0.1467 -0.0077 -0.0028 +0.0144 -0.0621 -0.0122
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0790 -0.0800 +0.0048 +0.0016 -0.0170 +0.0233 +0.0010
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2372 0.2301 +0.0504 -0.0481 +0.0073 -0.0282 -0.0071
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0985 0.1004 +0.0031 -0.0032 -0.0081 +0.0226 +0.0019
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0444 -0.0439 +0.0011 -0.0008 -0.0084 +0.0023 -0.0006
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2255 0.2250 +0.0036 -0.0008 +0.0016 +0.0222 -0.0005
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1259 0.1270 +0.0005 -0.0096 -0.0297 +0.1213 +0.0011
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0774 -0.0803 +0.0056 -0.0034 -0.0033 -0.0311 +0.0029
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0658 0.0548 +0.0405 -0.0089 +0.0322 -0.0515 -0.0109
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0464 +0.0258 +0.0029 -0.0003 -0.0236
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0237 -0.0049 +0.0142 +0.0054 -0.0441
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0289 -0.0001 -0.0108 +0.0000 +0.0248
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0809 +0.0137 -0.0048 +0.0001 +0.0402
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0984 -0.0232 +0.0027 +0.0012 +0.0358
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0184 -0.0350 +0.0076 +0.0002 -0.0033
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0658 +0.0131 -0.0109 +0.0003 +0.0542
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1615 -0.0435 -0.0160 +0.0023 +0.1036
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.1007 -0.0508 -0.0078 +0.0009 +0.0564

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1266 0.1257 +0.0343 +0.0202 -0.0086 -0.1812 -0.0009
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1144 0.1128 +0.0169 -0.0058 +0.0004 -0.0955 -0.0016
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1190 0.1167 +0.0117 -0.0078 +0.0011 -0.1419 -0.0022
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1431 0.1359 +0.0441 -0.0007 -0.0136 -0.1549 -0.0072
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1266 0.1233 +0.0164 -0.0031 -0.0002 -0.0926 -0.0033
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1285 0.1296 +0.0170 -0.0063 +0.0017 -0.1395 +0.0011
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1525 +0.0354 +0.0384 -0.0420 -0.4231
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2166 +0.0422 -0.0321 -0.0167 -0.1334
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3611 +0.2175 -0.0279 -0.1166 -0.8801
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1400 +0.0427 +0.0074 -0.0036 -0.1164
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2295 +0.0473 +0.0030 -0.0078 -0.1061
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1770 +0.0549 +0.0262 -0.0056 -0.2031
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1429 +0.0358 +0.0129 -0.0110 -0.1886
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1910 +0.0274 +0.0045 -0.0018 -0.0944
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1946 +0.0778 +0.0001 -0.0169 -0.3438
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1875 0.1935 +0.0445 +0.0761 -0.1281 -0.3834 +0.0061
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0485 0.0414 -0.0103 +0.0134 -0.0147 -0.1027 -0.0072
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3018 0.2941 -0.0030 +0.1483 +0.0078 -0.6557 -0.0078
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1851 0.1859 +0.0037 +0.0045 +0.0051 -0.1654 +0.0008
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0430 0.0411 +0.0676 -0.0087 -0.0168 -0.1087 -0.0020
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1860 0.1817 +0.0316 +0.0062 -0.0049 -0.1493 -0.0043
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2052 0.1965 -0.0093 +0.0378 -0.0706 -0.3716 -0.0087
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0596 0.0552 +0.0977 -0.0155 +0.0159 -0.1882 -0.0044
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4715 0.4391 +0.0737 +0.1982 -0.0827 -0.8036 -0.0324
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1056 +0.0321 -0.0450 -0.0051 -0.3770
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1288 +0.0200 -0.0293 -0.0344 -0.4130
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0783 +0.0068 -0.0387 -0.0080 -0.0284
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0871 +0.0190 -0.0584 -0.0028 -0.0649
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0977 +0.0281 -0.0478 -0.0031 -0.0967
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0885 +0.0273 -0.0601 -0.0037 -0.0455
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1008 +0.0130 -0.0614 -0.0008 -0.0842
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1632 +0.0619 -0.0455 -0.0143 -0.4108
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1083 +0.0688 -0.0494 -0.0103 -0.3888

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0570 0.0547 +0.0149 -0.0182 -0.0054 -0.0638 -0.0023
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0350 0.0359 +0.0035 +0.0005 +0.0043 -0.0465 +0.0009
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0396 0.0445 -0.0157 -0.0104 +0.0083 -0.0726 +0.0049
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0483 0.0447 -0.0042 +0.0002 -0.0084 -0.0713 -0.0036
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0383 0.0363 +0.0032 -0.0030 +0.0035 -0.0334 -0.0020
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0521 0.0516 +0.0000 +0.0073 -0.0081 -0.0733 -0.0005
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0444 +0.0402 -0.0136 +0.0467 -0.2213
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0756 +0.0316 -0.0208 -0.0112 -0.0330
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.0864 +0.1306 -0.0136 -0.0647 -0.3064
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0220 +0.0032 +0.0034 -0.0021 -0.0245
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0454 +0.0110 -0.0047 +0.0013 -0.0171
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0271 +0.0055 -0.0000 +0.0038 -0.0350
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0294 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0097
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0363 +0.0296 -0.0022 -0.0025 -0.0845
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0480 0.0465 +0.0146 +0.0452 -0.0355 -0.1797 -0.0015
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0174 0.0219 -0.0057 -0.0062 -0.0031 -0.0312 +0.0045
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0995 0.1386 -0.1294 +0.1626 +0.0090 -0.4010 +0.0390
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0336 0.0342 -0.0046 +0.0074 +0.0016 -0.0355 +0.0006
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0094 0.0093 +0.0109 -0.0066 +0.0090 -0.0340 -0.0001
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0353 0.0355 -0.0053 +0.0093 +0.0025 -0.0471 +0.0002
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0632 0.0525 -0.0166 +0.0170 -0.0166 -0.1543 -0.0107
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0192 0.0187 +0.0068 -0.0006 -0.0039 -0.0545 -0.0005
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1308 0.1264 -0.0891 -0.0032 -0.0082 -0.2996 -0.0044
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0565 +0.0682 -0.0593 -0.0056 -0.1658
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0758 +0.0668 -0.0849 -0.0031 -0.1677
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0332 +0.0113 -0.0357 +0.0198 -0.0196
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0243 -0.0054 -0.0154 +0.0040 -0.0244
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0262 -0.0011 -0.0225 +0.0112 -0.0346
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0243 +0.0094 -0.0181 -0.0013 -0.0214
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0342 -0.0134 -0.0199 -0.0090 -0.0333
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0576 +0.0271 -0.0671 +0.0055 -0.2016
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0403 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 118.1000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 13.5100 18.0200 -6.0500 +0.7000 -1.8500 +0.8900 +4.5100 -25.1350% +4.0416% -9.3105% +5.1956% +33.3827%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.4300 10.1000 -2.6500 +1.0300 +1.7400 +0.8100 +2.6700 -20.7843% +11.3561% +20.8134% +8.7191% +35.9354%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.2800 9.7800 -2.5300 +0.8200 +0.1200 -1.0300 +2.5000 -20.5524% +9.1518% +1.2422% -9.5282% +34.3407%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.7800 5.1500 +0.9200 +0.7400 +0.2100 +0.3700 +21.7494% +16.7800% +4.2510% +7.7406%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4000 5.2000 -0.1800 +0.8200 +0.4500 +0.6600 -0.2000 -3.3457% +18.7215% +9.4737% +14.5374% -3.7037%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.5600 4.5600 -0.8700 +0.4200 +0.1200 -0.1000 +0 -16.0221% +10.1449% +2.7027% -2.1459% +0%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9700 5.4200 -0.1300 +1 +0.8900 +0.9600 +0.4500 -2.3423% +22.6244% +19.6468% +21.5247% +9.0543%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 48.4900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 16.6200 16.5100 -11.1500 -3.2500 -1.8100 -2.7700 -0.1100 -40.3109% -16.4474% -9.8799% -14.3672% -0.6619%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.8600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.0300 4.4800 -1.3100 -0.1100 -0.1700 +0.3900 -0.5500 -22.6252% -2.3965% -3.6559% +9.5355% -10.9344%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4200 5.0400 -1.2200 +0.6400 -0.8400 -0.3800 -19.4888% +14.5455% -14.2857% -7.0111%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.5400 4.7500 +0.2300 +1.0200 -0.0500 +1.1100 +0.2100 +5.0885% +27.3458% -1.0417% +30.4945% +4.6256%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.2100 4.0700 -1.6700 +0.5600 +0.1500 +0.6300 -0.1400 -29.0941% +15.9544% +3.8265% +18.3140% -3.3254%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.2500 5.4200 -1.6500 -0.1100 -0.0900 -0.3200 +0.1700 -23.3380% -1.9892% -1.6334% -5.5749% +3.2381%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.4100 6.0200 -1.5700 +0.2900 -0.1200 +0.4800 +0.6100 -20.6851% +5.0611% -1.9544% +8.6643% +11.2754%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2600 4.9700 -1.4800 +0.3000 +0.6700 +0.5600 -0.2900 -22.9457% +6.4240% +15.5814% +12.6984% -5.5133%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.1400 6.1300 -1.2500 +1.2000 +1.5000 +0.5100 +0.9900 -16.9377% +24.3408% +32.3974% +9.0747% +19.2607%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.7700 5.4300 +0.6900 +1.7700 +2.0400 +0.6600 +14.5570% +48.3607% +60.1770% +13.8365%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.6800 4.3500 -0.9100 +0.5100 +0.5900 -0.3300 -17.3004% +13.2812% +15.6915% -7.0513%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.8300 5.2300 +0.5800 +1.8000 +1.5200 +1.7800 +1.4000 +12.4731% +52.4781% +40.9704% +51.5942% +36.5535%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.6900 4.9500 +0.7800 +1.6600 +1.2600 +1.6800 +0.2600 +18.7050% +50.4559% +34.1463% +51.3761% +5.5437%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2300 4.9000 -0.3800 +1.3700 +1.3000 +1.4100 +0.6700 -7.1970% +38.8102% +36.1111% +40.4011% +15.8392%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.8700 4.5900 -0.9200 +0.7700 +0.4400 -0.2200 -0.2800 -16.6969% +20.1571% +10.6024% -4.5738% -5.7495%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5 5.0900 +0.3600 +1.6300 +1.5200 +0.0900 +7.6110% +47.1098% +42.5770% +1.8000%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.5400 5.0100 +0.3600 +1.3900 +1.2800 +1.2300 +0.4700 +7.7419% +38.3978% +34.3164% +32.5397% +10.3524%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5000 8.1500 -0.8900 +1.6000 +2.0500 +0.6500 -9.8451% +24.4275% +33.6066% +8.6667%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 67.1900
Seer_Astral_single 4.4700 4.1400 5.5800 5.8300 5.3600 +0.8900 +1.2200 -0.2200 -0.4700 +19.9105% +29.4686% -3.9427% -8.0617%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 148
EWZ_2P_MBR_Exploris 26.1800 19.1700 25.6300 -0.5500 +6.4600 -2.1008% +33.6985%
EWZ_2P_MBR_Exploris_Human 12.9100 11.3400 13.4700 +0.5600 +2.1300 +4.3377% +18.7831%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.8500 14.9600 +2.9000 +3.1100 +24.0464% +26.2447%
MacCoss_Eclipse_Normalization_noNorm 27.5100 27.3400 33.1800 +5.6700 +5.8400 +20.6107% +21.3606%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.1700 35.4600 +7.7900 +7.2900 +28.1532% +25.8786%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png