Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541
MTAC_3P_Alternating 586322 615762 610710 599881 599881 601220 +14898 -14542 -9490 +1339 +1339 +2.5409% -2.3616% -1.5539% +0.2232% +0.2232%
MTAC_3P_Standard 596590 623022 617574 607435 607435 609512 +12922 -13510 -8062 +2077 +2077 +2.1660% -2.1685% -1.3054% +0.3419% +0.3419%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 136557 -991 -282 +997 +997 -0.7205% -0.2061% +0.7355% +0.7355%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 155742 +101 -809 -767 +707 +898 +0.0649% -0.5168% -0.4901% +0.4560% +0.5799%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 137906 -603 -1479 -1386 +21 +119 -0.4354% -1.0611% -0.9950% +0.0152% +0.0864%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 161135 +2173 +2403 +1975 +3213 +3213 +1.3670% +1.5139% +1.2409% +2.0345% +2.0345%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 44217 +3335 +2517 +1792 +2117 +2117 +8.1576% +6.0360% +4.2239% +5.0285% +5.0285%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 42808 +1739 +406 +785 +1656 +1656 +4.2343% +0.9575% +1.8680% +4.0241% +4.0241%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 24105 +15365 +990 +1090 +1192 +1192 +175.8009% +4.2829% +4.7360% +5.2023% +5.2023%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 19424 +2489 +1871 +1015 +1076 +1076 +14.6974% +10.6591% +5.5136% +5.8644% +5.8644%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 100667 +759 -2224 +1684 +2019 +2019 +0.7597% -2.1615% +1.7013% +2.0467% +2.0467%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 71323 +225 -1405 -122 +197 +197 +0.3165% -1.9319% -0.1708% +0.2770% +0.2770%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 116056 +899 -1260 +1734 +2975 +2806 +0.7807% -1.0740% +1.5168% +2.6309% +2.4777%
SCP_Astral_10ng_ms 105704 106497 105622 104434 104512 107748 +2044 +1251 +2126 +3314 +3236 +1.9337% +1.1747% +2.0128% +3.1733% +3.0963%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 11357 +1163 +551 +119 +124 +124 +11.4087% +5.0990% +1.0589% +1.1039% +1.1039%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 15803 +996 +370 -238 +104 +104 +6.7265% +2.3975% -1.4837% +0.6625% +0.6625%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 2397 +1136 +365 -53 +11 +11 +90.0872% +17.9626% -2.1633% +0.4610% +0.4610%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 6028 +4592 +1245 +338 +297 +297 +319.7772% +26.0297% +5.9402% +5.1823% +5.1823%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 23367 +1657 +1472 +787 +904 +904 +7.6324% +6.7230% +3.4854% +4.0244% +4.0244%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 26333 +473 +190 +73 +708 +708 +1.8291% +0.7268% +0.2780% +2.7629% +2.7629%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 7143 +3659 +245 +309 +309 +105.0230% +3.5518% +4.5215% +4.5215%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 13548 +2849 +2074 +666 +659 +659 +26.6287% +18.0756% +5.1700% +5.1129% +5.1129%
SCP_Astral_MBR 92167 93585 91884 90864 90838 92400 +233 -1185 +516 +1536 +1562 +0.2528% -1.2662% +0.5616% +1.6904% +1.7195%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 55603 -1096 -190 -288 -288 -1.9330% -0.3405% -0.5153% -0.5153%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346
EWZ_2P_MBR_Exploris_Human 836809 836809
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031
MTAC_3P_Alternating 108267 117352 114659 114816 114816 114637 +6370 -2715 -22 -179 -179 +5.8836% -2.3136% -0.0192% -0.1559% -0.1559%
MTAC_3P_Standard 110265 118693 115800 116148 116148 116685 +6420 -2008 +885 +537 +537 +5.8223% -1.6918% +0.7642% +0.4623% +0.4623%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 49580 +722 +548 +585 +585 +1.4778% +1.1176% +1.1940% +1.1940%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 55964 +1995 +889 +124 +80 +143 +3.6966% +1.6142% +0.2221% +0.1432% +0.2562%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 50399 +1778 +734 +110 -61 -16 +3.6569% +1.4779% +0.2187% -0.1209% -0.0317%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 57987 +2927 +2068 +1280 +1160 +1160 +5.3160% +3.6982% +2.2572% +2.0413% +2.0413%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 16423 +1983 +1465 +1174 +716 +716 +13.7327% +9.7941% +7.6989% +4.5585% +4.5585%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 15591 +1108 +526 +675 +521 +519 +7.6503% +3.4915% +4.5253% +3.4572% +3.4435%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 9867 +1127 +491 +478 +503 +482 +12.8947% +5.2368% +5.0911% +5.3716% +5.1359%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 10407 +1509 +1148 +623 +597 +597 +16.9589% +12.3987% +6.3675% +6.0856% +6.0856%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 35031 +166 -1266 +689 +606 +606 +0.4761% -3.4879% +2.0063% +1.7603% +1.7603%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 25329 +680 -137 +210 +106 +106 +2.7587% -0.5380% +0.8360% +0.4203% +0.4203%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 40879 +723 -666 +836 +986 +933 +1.8005% -1.6031% +2.0878% +2.4716% +2.3357%
SCP_Astral_10ng_ms 36688 37676 37649 37421 37459 38915 +2227 +1239 +1266 +1494 +1456 +6.0701% +3.2886% +3.3626% +3.9924% +3.8869%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 4345 +679 +396 +136 +99 +99 +18.5215% +10.0279% +3.2312% +2.3316% +2.3316%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 6090 +791 +479 +235 +24 +23 +14.9273% +8.5368% +4.0137% +0.3956% +0.3791%
SCP_Astral_250pg_3ms 675 721 908 879 879 897 +222 +176 -11 +18 +18 +32.8889% +24.4105% -1.2115% +2.0478% +2.0478%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 2279 +843 +541 +134 +116 +114 +58.7047% +31.1277% +6.2471% +5.3629% +5.2656%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 8849 +1055 +877 +597 +443 +441 +13.5361% +11.0010% +7.2346% +5.2700% +5.2450%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 9728 +570 +386 +357 +314 +313 +6.2241% +4.1319% +3.8096% +3.3355% +3.3245%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 2724 +878 +124 +138 +135 +47.5623% +4.7692% +5.3364% +5.2144%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 5087 +1213 +932 +313 +282 +283 +31.3113% +22.4308% +6.5563% +5.8689% +5.8909%
SCP_Astral_MBR 24110 24991 24570 24544 24527 24713 +603 -278 +143 +169 +186 +2.5010% -1.1124% +0.5820% +0.6886% +0.7583%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 55603 -1096 -190 -288 -288 -1.9330% -0.3405% -0.5153% -0.5153%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147
EWZ_2P_MBR_Exploris_Human 48465 48473
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177
MacCoss_Eclipse_Normalization_noNorm 73278 73277
MacCoss_Eclipse_Normalization_yesNorm 73278 73277

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286
MTAC_3P_Alternating 63773 63974 63611 63015 65835 65424 +1651 +1450 +1813 +2409 -411 +2.5889% +2.2665% +2.8501% +3.8229% -0.6243%
MTAC_3P_Standard 64317 64464 64219 63385 65967 65484 +1167 +1020 +1265 +2099 -483 +1.8145% +1.5823% +1.9698% +3.3115% -0.7322%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12213 +146 +243 +273 -26 +1.2099% +2.0301% +2.2864% -0.2124%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 12614 +182 +143 +252 +286 -46 +1.4640% +1.1467% +2.0385% +2.3199% -0.3633%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12267 +259 +220 +307 +299 +87 +2.1569% +1.8262% +2.5669% +2.4983% +0.7143%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 12872 +311 +407 +395 +462 +98 +2.4759% +3.2651% +3.1658% +3.7228% +0.7672%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 10459 +1296 +931 +874 +1125 +437 +14.1438% +9.7712% +9.1184% +12.0527% +4.3604%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 10315 +1017 +554 +903 +762 +326 +10.9378% +5.6756% +9.5941% +7.9766% +3.2636%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 6260 +3810 +176 +13 +144 -89 +155.5102% +2.8928% +0.2081% +2.3545% -1.4018%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 5099 +396 +511 +141 +176 +150 +8.4202% +11.1378% +2.8439% +3.5751% +3.0309%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 16732 +542 +452 +707 +677 +196 +3.3477% +2.7764% +4.4119% +4.2168% +1.1853%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14025 +426 +184 +337 +354 +41 +3.1326% +1.3294% +2.4620% +2.5894% +0.2932%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 17555 +538 +377 +642 +810 +206 +3.1615% +2.1947% +3.7959% +4.8373% +1.1874%
SCP_Astral_10ng_ms 16252 16276 16117 15925 16458 16619 +367 +343 +502 +694 +161 +2.2582% +2.1074% +3.1147% +4.3579% +0.9782%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 3936 +289 +23 +72 +397 +122 +7.9243% +0.5878% +1.8634% +11.2179% +3.1987%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5173 +873 +570 +376 +196 +4 +20.3023% +12.3832% +7.8382% +3.9381% +0.0774%
SCP_Astral_250pg_3ms 576 22 936 741 736 761 +185 +739 -175 +20 +25 +32.1181% +3359.0909% -18.6966% +2.6991% +3.3967%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 2294 +1657 +214 +265 +248 +226 +260.1256% +10.2885% +13.0606% +12.1212% +10.9284%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 6690 +445 +344 +674 +563 +471 +7.1257% +5.4207% +11.2035% +9.1888% +7.5736%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7334 +612 +605 +322 +311 -8 +9.1044% +8.9909% +4.5921% +4.4283% -0.1090%
SCP_Astral_500pg_3ms 982 2365 2177 2236 2314 +1332 -51 +137 +78 +135.6415% -2.1564% +6.2931% +3.4884%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 4381 +673 +374 +336 +463 +278 +18.1499% +9.3337% +8.3066% +11.8173% +6.7755%
SCP_Astral_MBR 20165 20129 20074 19793 19898 20260 +95 +131 +186 +467 +362 +0.4711% +0.6508% +0.9266% +2.3594% +1.8193%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4817 +132 +117 +185 +78 +2.8175% +2.4894% +3.9940% +1.6459%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422
EWZ_2P_MBR_Exploris_Human 115447 117345
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706
MacCoss_Eclipse_Normalization_noNorm 178174 183543
MacCoss_Eclipse_Normalization_yesNorm 178174 183543

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249
MTAC_3P_Alternating 11361 11494 11351 11338 11798 11738 +377 +244 +387 +400 -60 +3.3184% +2.1228% +3.4094% +3.5280% -0.5086%
MTAC_3P_Standard 11473 11560 11477 11396 11832 11772 +299 +212 +295 +376 -60 +2.6061% +1.8339% +2.5704% +3.2994% -0.5071%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4195 +67 +103 +95 +12 +1.6231% +2.5171% +2.3171% +0.2869%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4310 +95 +62 +92 +96 -27 +2.2539% +1.4595% +2.1811% +2.2781% -0.6226%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4209 +134 +75 +119 +112 +24 +3.2883% +1.8142% +2.9095% +2.7337% +0.5735%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4387 +138 +150 +143 +156 +33 +3.2478% +3.5402% +3.3695% +3.6871% +0.7579%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 3700 +455 +311 +289 +382 +139 +14.0216% +9.1767% +8.4726% +11.5130% +3.9034%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3606 +352 +173 +315 +172 +114 +10.8175% +5.0393% +9.5716% +5.0087% +3.2646%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 2397 -53 +1 -53 +0 -37 -2.1633% +0.0417% -2.1633% +0% -1.5201%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 2632 +124 +196 -2 -10 +49 +4.9442% +8.0460% -0.0759% -0.3785% +1.8970%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 5687 +108 +31 +183 +141 +33 +1.9358% +0.5481% +3.3249% +2.5424% +0.5837%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 4856 +135 +18 +73 +45 +12 +2.8596% +0.3721% +1.5262% +0.9354% +0.2477%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6032 +186 +83 +189 +227 +67 +3.1817% +1.3952% +3.2346% +3.9104% +1.1232%
SCP_Astral_10ng_ms 5611 5655 5596 5553 5713 5756 +145 +101 +160 +203 +43 +2.5842% +1.7860% +2.8592% +3.6557% +0.7527%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 1435 +143 +11 +29 +147 +76 +11.0681% +0.7725% +2.0626% +11.4130% +5.5923%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 1888 +320 +228 +130 +15 +18 +20.4082% +13.7349% +7.3948% +0.8009% +0.9626%
SCP_Astral_250pg_3ms 307 8 350 283 281 279 -28 +271 -71 -4 -2 -9.1205% +3387.5000% -20.2857% -1.4134% -0.7117%
SCP_Astral_250pg_6ms 637 756 751 766 767 872 +235 +116 +121 +106 +105 +36.8917% +15.3439% +16.1119% +13.8381% +13.6897%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2391 +184 +116 +222 +161 +174 +8.3371% +5.0989% +10.2351% +7.2197% +7.8484%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2577 +174 +189 +100 +38 -21 +7.2409% +7.9146% +4.0371% +1.4967% -0.8083%
SCP_Astral_500pg_3ms 525 902 828 835 859 +334 -43 +31 +24 +63.6190% -4.7672% +3.7440% +2.8743%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 1590 +272 +143 +104 +155 +122 +20.6373% +9.8825% +6.9987% +10.8014% +8.3106%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4800 +92 +80 +88 +85 +84 +1.9541% +1.6949% +1.8676% +1.8028% +1.7812%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4817 +132 +117 +185 +78 +2.8175% +2.4894% +3.9940% +1.6459%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106
EWZ_2P_MBR_Exploris_Human 6167 6284
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963
MacCoss_Eclipse_Normalization_noNorm 5804 5955
MacCoss_Eclipse_Normalization_yesNorm 5804 5955

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279
MTAC_3P_Alternating 65832 65421 -411
MTAC_3P_Standard 65967 65484 -483
MTAC_Yeast_Alternating_3min 12239 12213 -26
MTAC_Yeast_Alternating_5min 12660 12614 -46
MTAC_Yeast_Standard_3min 12180 12267 +87
MTAC_Yeast_Standard_5min 12772 12868 +96
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 10459 +437
SCP_Astral_1000pg_24ms 9989 10315 +326
SCP_Astral_1000pg_3ms 6349 6260 -89
SCP_Astral_1000pg_6ms 4949 5099 +150
SCP_Astral_10ng_12ms 16536 16732 +196
SCP_Astral_10ng_24ms 13982 14024 +42
SCP_Astral_10ng_6ms 17349 17555 +206
SCP_Astral_10ng_ms 16458 16615 +157
SCP_Astral_250pg_12ms 3814 3936 +122
SCP_Astral_250pg_24ms 5169 5173 +4
SCP_Astral_250pg_3ms 736 761 +25
SCP_Astral_250pg_6ms 2066 2287 +221
SCP_Astral_500pg_12ms 6219 6690 +471
SCP_Astral_500pg_24ms 7342 7334 -8
SCP_Astral_500pg_3ms 2234 2314 +80
SCP_Astral_500pg_6ms 4103 4381 +278
SCP_Astral_MBR 19891 20252 +361
Seer_Astral_45 242898
Seer_Astral_single 4739 4817 +78
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422
EWZ_2P_MBR_Exploris_Human 117340
EWZ_2P_MBR_Exploris_YeastHuman 130702
MacCoss_Eclipse_Normalization_noNorm 183540
MacCoss_Eclipse_Normalization_yesNorm 183540

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0010 -0.0006 -0.0010 -0.0000 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0012 +0.0002 -0.0016 -0.0006 -0.0005 -0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0029 -0.0014 -0.0010 -0.0003 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0012 -0.0008 +0.0000 +0.0002 +0.0003 +0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0023 -0.0004 -0.0010 -0.0011 -0.0003 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0017 -0.0007 +0.0002 +0.0007 +0.0008
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0037 -0.0014 -0.0007 -0.0017
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 -0.0010 +0.0044 +0.0023 +0.0022 +0.0036 +0.0036
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 -0.0030 -0.0000 +0.0018 -0.0000 +0.0008 +0.0016
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 -0.0022 -0.0020 -0.0011 +0.0014 +0.0004 +0.0004
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0010 +0.0012 +0.0006 +0.0014 +0.0014
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0018 +0.0003 -0.0026 -0.0003 -0.0005 -0.0005
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0026 -0.0001 +0.0001 -0.0007 -0.0008 -0.0008
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0027 -0.0019 -0.0028 -0.0006 -0.0015 -0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0005 +0.0033 +0.0035 -0.0008 +0.0047 +0.0047
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0021 -0.0019 -0.0009 +0.0003 +0.0010 +0.0010
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 -0.0022 +0.0029 +0.0004 +0.0027 +0.0022
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0025 -0.0004 -0.0016 +0.0002 +0.0001 +0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 -0.0012 +0.0001 +0.0012 +0.0000 -0.0001 -0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0013 +0.0026 +0.0036 +0.0048 +0.0048
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 -0.0017 +0.0013 +0.0015 -0.0003 -0.0003
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0021 +0.0006 -0.0001 -0.0007 +0.0001 +0.0001
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0006 +0.0016 +0.0016
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0038 -0.0028 -0.0027 -0.0043 -0.0045 -0.0027
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0015 -0.0002 +0.0010 +0.0014 +0.0011 +0.0028
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0042 +0.0024 +0.0011 +0.0006 +0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0016 +0.0025 +0.0022 +0.0032 +0.0017 +0.0041
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0056 +0.0002 -0.0009 -0.0036 -0.0028 -0.0032
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0071 -0.0035 -0.0026 -0.0015 -0.0017
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0028 +0.0021 +0.0013 +0.0014 +0.0012
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0007 +0.0063 +0.0051 +0.0063 +0.0063 +0.0076
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0072 -0.0013 -0.0013 -0.0000 -0.0000 +0.0015
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0054 -0.0036 -0.0004 -0.0011 -0.0009 -0.0007
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0028 +0.0026 +0.0011 +0.0025 +0.0032
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0033 -0.0001 -0.0010 -0.0017 +0.0012 +0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0062 -0.0025 +0.0012 +0.0005 -0.0001 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0036 +0.0019 -0.0016 +0.0018 +0.0010 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0015 +0.0068 +0.0091 +0.0049 +0.0078 +0.0076
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0056 -0.0014 -0.0014 -0.0030 -0.0043 -0.0014
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0 +0.0028 +0 +0.0085 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 -0.0066 +0.0033 +0.0001 +0.0019 +0.0022 +0.0022
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0006 +0.0030 +0.0034 -0.0020 +0.0015 +0.0019
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0003 +0.0023 +0.0004 +0.0054 +0.0065 +0.0063
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0046 -0.0004 -0.0117 -0.0066 -0.0045 -0.0044
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 -0.0021 +0.0023 +0.0024 -0.0014 +0.0034 +0.0021
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0033 +0.0026 -0.0004 -0.0008 +0.0017 +0.0023
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 -0.0005 +0.0069 +0.0068
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0008 -0.0007 -0.0011 -0.0006 -0.0007 -0.0007
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0007 +0.0001 -0.0009 -0.0004 -0.0004 -0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0014 -0.0004 -0.0001 -0.0000 -0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0006 -0.0002 +0.0001 +0.0004 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0011 -0.0003 -0.0004 -0.0003 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 -0.0011 -0.0003 -0.0001 +0.0004 +0.0004
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0019 -0.0004 +0.0011 -0.0000
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0001 +0.0046 +0.0029 +0.0032 +0.0038 +0.0038
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 -0.0019 +0.0001 +0.0011 +0.0007 +0.0007 +0.0015
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 -0.0022 -0.0024 -0.0016 +0.0006 +0.0002 +0.0002
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0008 +0.0009 +0.0002 +0.0008 +0.0008
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0013 +0.0001 -0.0016 -0.0001 -0.0005 -0.0005
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0019 +0.0000 +0.0001 -0.0004 -0.0005 -0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0017 -0.0012 -0.0019 -0.0005 -0.0008 -0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0005 +0.0035 +0.0032 +0.0007 +0.0036 +0.0036
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0008 -0.0001 +0.0000 +0.0005 +0.0006 +0.0006
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0003 +0.0040 +0.0024 +0.0033 +0.0033
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0016 +0.0002 -0.0012 +0.0004 -0.0003 -0.0003
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 -0.0001 +0.0015 +0.0016 +0.0016 +0.0015 +0.0015
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0023 +0.0004 +0.0026 +0.0038 +0.0038
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 -0.0008 +0.0018 +0.0011 +0.0002 +0.0002
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 -0.0009 +0.0008 +0.0006 -0.0001 +0.0004 +0.0004
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0006 +0.0016 +0.0016
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0022 -0.0021 -0.0020 -0.0025 -0.0025 -0.0017
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0009 -0.0001 +0.0004 +0.0011 +0.0009 +0.0014
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0023 +0.0014 +0.0011 +0.0007 -0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 -0.0002 +0.0035 +0.0019 +0.0022 +0.0011 +0.0023
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0035 +0.0003 -0.0000 -0.0021 -0.0020 -0.0017
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0052 -0.0029 -0.0025 -0.0014 -0.0018
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0018 +0.0019 +0.0005 +0.0014 +0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0014 +0.0062 +0.0069 +0.0072 +0.0057 +0.0073
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0060 -0.0016 -0.0027 -0.0019 -0.0029 +0.0005
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0053 -0.0029 -0.0018 -0.0013 -0.0013 -0.0021
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0025 +0.0023 +0.0006 +0.0017 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0022 +0.0010 -0.0008 -0.0007 +0.0004 +0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0041 -0.0020 +0.0005 -0.0003 -0.0008 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0033 +0.0006 -0.0014 +0.0005 -0.0004 +0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0020 +0.0059 +0.0061 +0.0039 +0.0050 +0.0064
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0040 -0.0027 -0.0009 -0.0037 -0.0040 -0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0092 -0.0032 -0.0010 -0.0045 -0.0092 -0.0092
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 -0.0038 +0.0062 +0.0030 +0.0017 +0.0009 +0.0010
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0001 +0.0041 +0.0036 +0.0008 +0.0029 +0.0023
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0011 +0.0030 +0.0010 +0.0054 +0.0056 +0.0078
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0024 +0.0056 -0.0042 -0.0004 +0.0021 +0.0022
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 -0.0001 +0.0019 +0.0021 -0.0010 +0.0027 +0.0017
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0019 +0.0004 -0.0002 +0.0003 +0.0009 +0.0021
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 -0.0002 +0.0073 +0.0067
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 +1 +2 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 +4 +1 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 +4 +0 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 +3 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1383 -0.0076 -0.0038 -0.0018 +0.0009 +0.0007
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1326 -0.0067 -0.0036 -0.0025 +0.0002 +0.0001
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1402 -0.0053 -0.0022 -0.0006 -0.0007
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1371 -0.0160 -0.0039 -0.0005 +0.0015 +0.0016
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1592 -0.0106 -0.0047 -0.0024 -0.0007 -0.0006
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1322 -0.0181 -0.0044 -0.0015 -0.0001 -0.0002
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0751 -0.0013 +0.0012 +0.0024 +0.0030 -0.0007
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0713 -0.0011 +0.0010 +0.0013 +0.0024 -0.0005
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0683 +0.0010 +0.0023 +0.0025 -0.0004
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0607 -0.0171 +0.0004 +0.0014 +0.0019 +0.0006
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0772 -0.0020 +0.0016 +0.0019 -0.0000 -0.0003
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0582 -0.0188 +0.0015 +0.0013 +0.0014 -0.0002
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 -0.0734 -0.0020 +0.0070 +0.0012 +0.0000 -0.0043
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0383 -0.0076 +0.0055 -0.0002 -0.0001 -0.0025
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0026 +0.0007 -0.0023 -0.0001 -0.0000 +0.0017
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.1346 +0.0012 -0.0008 +0.0020 -0.0002 +0.0079
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0728 -0.0054 -0.0006 -0.0003 +0.0001 +0.0005
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0273 -0.0080 +0.0050 -0.0016 -0.0001 -0.0016
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 -0.0059 -0.0059 +0.0211 -0.0012
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 +0.0062 +0.0047 -0.0191 -0.0001
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 +0.0183 -0.0240 +0.0287 +0.0020
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 +0.0048 -0.0054 -0.0067 +0.0002
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 +0.0009 +0.0001 -0.0089 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 +0.0051 -0.0017 +0.0004 +0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 -0.0032 -0.0062 -0.0160 +0.0006
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 +0.0043 -0.0045 -0.0054 -0.0001
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 +0.0169 -0.0238 +0.0355 +0
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 -0.0710 +0.0009 +0.0076 -0.0005 +0.0006 -0.0030
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0378 -0.0089 +0.0045 +0.0004 +0.0011 -0.0044
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 -0.0025 +0.0054 -0.0044 +0.0010 +0.0033 -0.0044
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.1260 +0.0013 +0.0005 -0.0055 +0.0004 +0.0049
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0698 -0.0060 -0.0005 -0.0005 -0.0005 +0.0002
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0313 -0.0084 +0.0078 -0.0007 +0.0020 -0.0017
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 -0.0077 -0.0028 +0.0144 -0.0004
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 +0.0048 +0.0016 -0.0170 -0.0057
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 +0.0504 -0.0481 +0.0073 +0.0089
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 +0.0031 -0.0032 -0.0081 +0.0006
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 +0.0011 -0.0008 -0.0084 -0.0000
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 +0.0036 -0.0008 +0.0016 +0.0018
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 +0.0005 -0.0096 -0.0297 +0.0070
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 +0.0056 -0.0034 -0.0033 +0.0038
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 +0.0405 -0.0089 +0.0322 +0.0276
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.3038 +0.0343 +0.0202 -0.0086 +0.0005 -0.0046
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.2093 +0.0169 -0.0058 +0.0004 +0.0004 -0.0010
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.2632 +0.0117 -0.0078 +0.0011 -0.0001 +0.0024
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.3045 +0.0441 -0.0007 -0.0136 +0.0007 +0.0058
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.2205 +0.0164 -0.0031 -0.0002 +0.0007 +0.0005
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.2772 +0.0170 -0.0063 +0.0017 +0.0006 +0.0086
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 +0.0445 +0.0761 -0.1281 +0.0017
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 -0.0103 +0.0134 -0.0147 -0.0018
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 -0.0030 +0.1483 +0.0078 -0.0120
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 +0.0037 +0.0045 +0.0051 +0.0002
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 +0.0676 -0.0087 -0.0168 +0.0006
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 +0.0316 +0.0062 -0.0049 +0.0001
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 -0.0093 +0.0378 -0.0706 +0.0033
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 +0.0977 -0.0155 +0.0159 +0.0001
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 +0.0737 +0.1982 -0.0827 -0.0008
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.1891 +0.0149 -0.0182 -0.0054 +0.1015 -0.0331
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.1023 +0.0035 +0.0005 +0.0043 +0.0189 +0.0020
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.1500 -0.0157 -0.0104 +0.0083 +0.0352 +0.0026
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.1664 -0.0042 +0.0002 -0.0084 +0.0711 -0.0243
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0910 +0.0032 -0.0030 +0.0035 +0.0313 -0.0119
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.1625 +0.0000 +0.0073 -0.0081 +0.0305 +0.0066
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 +0.0146 +0.0452 -0.0355 +0.0761
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 -0.0057 -0.0062 -0.0031 +0.0154
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 -0.1294 +0.1626 +0.0090 +0.0813
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 -0.0046 +0.0074 +0.0016 +0.0039
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 +0.0109 -0.0066 +0.0090 -0.0065
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 -0.0053 +0.0093 +0.0025 +0.0083
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 -0.0166 +0.0170 -0.0166 +0.0315
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 +0.0068 -0.0006 -0.0039 +0.0560
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 -0.0891 -0.0032 -0.0082 +0.0618
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 8.7400 -4.0100 -0.3300 +0.3800 -0.5500 +0.6100 -31.4510% -3.6384% +4.5455% -5.9203% +7.5031%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 10.9800 -1.3300 +2.0200 +1.3200 +0.1700 +1.1900 -10.8042% +22.5446% +13.6646% +1.5726% +12.1553%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.3000 +0.0700 -0.1100 -0.6400 +0.0200 +1.6548% -2.4943% -12.9555% +0.4673%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.7100 -0.6700 +0.3300 -0.0400 +0.1700 +0.1500 -12.4535% +7.5342% -0.8421% +3.7445% +3.2895%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.4200 -1.0100 +0.2800 -0.0200 -0.2400 +0.1800 -18.6004% +6.7633% -0.4505% -5.1502% +4.2453%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.0600 -0.4900 +0.6400 +0.5300 +0.6000 +0.5200 -8.8288% +14.4796% +11.6998% +13.4529% +11.4537%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.7600 -1.0300 +0.1700 +0.1100 +0.6700 +0.4000 -17.7893% +3.7037% +2.3656% +16.3814% +9.1743%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.1100 -1.1500 +0.7100 -0.7700 +0.1000 -18.3706% +16.1364% -13.0952% +1.9960%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.3100 -0.2100 +0.5800 -0.4900 +0.6700 +0.4800 -4.6460% +15.5496% -10.2083% +18.4066% +12.5326%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.1000 -1.6400 +0.5900 +0.1800 +0.6600 +0.3800 -28.5714% +16.8091% +4.5918% +19.1860% +10.2151%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 5.9600 -1.1100 +0.4300 +0.4500 +0.2200 +0.4900 -15.7001% +7.7758% +8.1670% +3.8328% +8.9580%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.5900 -1 +0.8600 +0.4500 +1.0500 +0.7000 -13.1752% +15.0087% +7.3290% +18.9531% +11.8846%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 4.9900 -2.3900 +0.0600 +0.3600 -0.6300 +0.0300 -32.3848% +1.2170% +7.7754% -11.2100% +0.6048%
SCP_Astral_10ng_ms 6.4500 4.6700 4.3000 4.4100 4.4200 4.7600 -1.6900 +0.0900 +0.4600 +0.3500 +0.3400 -26.2016% +1.9272% +10.6977% +7.9365% +7.6923%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.1200 -0.6200 +0.4600 +0.7300 +0.5300 -13.0802% +12.5683% +21.5339% +14.7632%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.1300 -1.1300 +0.2900 +0.3700 +0.0700 -21.4829% +7.5521% +9.8404% +1.7241%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4 -0.6500 +0.5700 +0.2900 +0.5500 +0.4500 -13.9785% +16.6181% +7.8167% +15.9420% +12.6761%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 3.6000 -0.5700 +0.3100 -0.0900 +0.3300 +0.0800 -13.6691% +9.4225% -2.4390% +10.0917% +2.2727%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.1400 -1.1400 +0.6100 +0.5400 +0.6500 +0.4400 -21.5909% +17.2805% +15.0000% +18.6246% +11.8919%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.6100 -0.9000 +0.7900 +0.4600 -0.2000 +0.5800 -16.3339% +20.6806% +11.0843% -4.1580% +14.3921%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 3.7300 -1.0000 +0.2700 +0.1600 -0.0400 -21.1416% +7.8035% +4.4818% -1.0610%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 3.7200 -0.9300 +0.1000 -0.0100 -0.0600 +0.2200 -20% +2.7624% -0.2681% -1.5873% +6.2857%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 6.7500 -2.2900 +0.2000 +0.6500 -0.4600 -25.3319% +3.0534% +10.6557% -6.3800%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.7900 +0.3200 +0.6500 -0.7900 -0.4300 +7.1588% +15.7005% -14.1577% -8.2375%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png