Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6780461
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1284406 1285853 +189359 -21152 -26102 -7688 +1447 +17.2695% -1.6184% -1.9895% -0.5943% +0.1127%
MTAC_3P_Alternating 586322 615762 610710 599881 617552 614783 +28461 -979 +4073 +14902 -2769 +4.8542% -0.1590% +0.6669% +2.4842% -0.4484%
MTAC_3P_Standard 596590 623022 617574 607435 624112 623650 +27060 +628 +6076 +16215 -462 +4.5358% +0.1008% +0.9838% +2.6694% -0.0740%
MTAC_Yeast_Alternating_3min 137548 136839 135560 143527 143115 +5567 +6276 +7555 -412 +4.0473% +4.5864% +5.5732% -0.2871%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 162146 161955 +6314 +5404 +5446 +6920 -191 +4.0568% +3.4519% +3.4797% +4.4635% -0.1178%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 144902 144365 +5856 +4980 +5073 +6480 -537 +4.2279% +3.5728% +3.6420% +4.6996% -0.3706%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 163364 163413 +4451 +4681 +4253 +5491 +49 +2.8000% +2.9490% +2.6722% +3.4770% +0.0300%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3430707
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1315141 1310534 +287798 +155865 +186661 +126450 -4607 +28.1400% +13.4987% +16.6087% +10.6791% -0.3503%
SCIEX_3P 672242 749525 722698 714454 737429
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 50408 51125 +10243 +9425 +8700 +9025 +717 +25.0550% +22.6019% +20.5068% +21.4371% +1.4224%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 48770 49109 +8040 +6707 +7086 +7957 +339 +19.5768% +15.8177% +16.8622% +19.3356% +0.6951%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 39091 39277 +30537 +16162 +16262 +16364 +186 +349.3936% +69.9200% +70.6583% +71.4180% +0.4758%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 27013 26989 +10054 +9436 +8580 +8641 -24 +59.3682% +53.7572% +46.6076% +47.0951% -0.0888%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 111950 111550 +11642 +8659 +12567 +12902 -400 +11.6527% +8.4157% +12.6961% +13.0788% -0.3573%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 82425 83223 +12125 +10495 +11778 +12097 +798 +17.0539% +14.4305% +16.4854% +17.0078% +0.9682%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 118105 118367 +12663 +11870 +12745 +13933 +262 +11.9797% +11.1459% +12.0666% +13.3414% +0.2218%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 124016 125119 +9962 +7803 +10797 +12038 +1103 +8.6508% +6.6513% +9.4444% +10.6455% +0.8894%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 17755 17577 +7383 +6771 +6339 +6344 -178 +72.4250% +62.6596% +56.4068% +56.4765% -1.0025%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 19443 19676 +4869 +4243 +3635 +3977 +233 +32.8831% +27.4930% +22.6607% +25.3328% +1.1984%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 7838 8220 +6959 +6188 +5770 +5834 +382 +551.8636% +304.5276% +235.5102% +244.5096% +4.8737%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 13463 13561 +12125 +8778 +7871 +7830 +98 +844.3593% +183.5250% +138.3304% +136.6254% +0.7279%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 30138 30184 +8474 +8289 +7604 +7721 +46 +39.0327% +37.8580% +33.6758% +34.3721% +0.1526%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 29951 30887 +5027 +4744 +4627 +5262 +936 +19.4393% +18.1463% +17.6200% +20.5346% +3.1251%
SCP_Astral_500pg_3ms 3484 6898 6834 17468 17533 +14049 +10635 +10699 +65 +403.2434% +154.1751% +156.5555% +0.3721%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 25826 26134 +15435 +14660 +13252 +13245 +308 +144.2658% +127.7671% +102.8722% +102.7620% +1.1926%
SCP_Astral_MBR 92167 93585 91884 90864 105889 105930 +13763 +12345 +14046 +15066 +41 +14.9327% +13.1912% +15.2867% +16.5808% +0.0387%
Seer_Astral_45 2512737 3124006 3135497 2971207 3002843
Seer_Astral_single 56699 55793 55891 58025 58866 +2167 +3073 +2975 +841 +3.8219% +5.5079% +5.3229% +1.4494%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17320764
EWZ_2P_MBR_Exploris 1776128 1855012 1853082 +76954 -1930 +4.3327% -0.1040%
EWZ_2P_MBR_Exploris_Human 836809 876894 872502 +35693 -4392 +4.2654% -0.5009%
EWZ_2P_MBR_Exploris_YeastHuman 914924 975923 973630 +58706 -2293 +6.4165% -0.2350%
MacCoss_Eclipse_Normalization_noNorm 2078034 2237537 2243870 +165836 +6333 +7.9804% +0.2830%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2237537 2243870 +165836 +6333 +7.9804% +0.2830%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 113299
KEAP1KO_Eclipse 111504 133619 131359 132031 145905 146800 +35296 +13181 +15441 +14769 +895 +31.6545% +9.8646% +11.7548% +11.1860% +0.6134%
MTAC_3P_Alternating 108267 117352 114659 114816 121363 121846 +13579 +4494 +7187 +7030 +483 +12.5421% +3.8295% +6.2682% +6.1228% +0.3980%
MTAC_3P_Standard 110265 118693 115800 116148 122895 122841 +12576 +4148 +7041 +6693 -54 +11.4053% +3.4947% +6.0803% +5.7625% -0.0439%
MTAC_Yeast_Alternating_3min 48858 49032 48995 53863 53807 +4949 +4775 +4812 -56 +10.1294% +9.7385% +9.8214% -0.1040%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 60319 60272 +6303 +5197 +4432 +4388 -47 +11.6789% +9.4362% +7.9370% +7.8520% -0.0779%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 55005 55063 +6442 +5398 +4774 +4603 +58 +13.2494% +10.8688% +9.4931% +9.1221% +0.1054%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 60460 60690 +5630 +4771 +3983 +3863 +230 +10.2252% +8.5320% +7.0238% +6.7978% +0.3804%
Olsen_Astral_3P 198770 231103 234505 234149 237050
Olsen_Exploris_3P 51272 58784 55047 58593 70903 70923 +19651 +12139 +15876 +12330 +20 +38.3270% +20.6502% +28.8408% +21.0435% +0.0282%
SCIEX_3P 82206 93920 87927 87858 99825
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 19045 19437 +4997 +4479 +4188 +3730 +392 +34.6053% +29.9438% +27.4641% +23.7474% +2.0583%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 18005 18280 +3797 +3215 +3364 +3210 +275 +26.2169% +21.3409% +22.5530% +21.3006% +1.5274%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 15749 15713 +6973 +6337 +6324 +6349 -36 +79.7826% +67.5875% +67.3554% +67.8022% -0.2286%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 15297 15373 +6475 +6114 +5589 +5563 +76 +72.7692% +66.0330% +57.1239% +56.7074% +0.4968%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 40288 40173 +5308 +3876 +5831 +5748 -115 +15.2244% +10.6786% +16.9792% +16.6972% -0.2854%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 29919 30275 +5626 +4809 +5156 +5052 +356 +22.8245% +18.8840% +20.5263% +20.0293% +1.1899%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 43088 43642 +6954 +5966 +5993 +6221 +554 +18.9544% +15.8350% +15.9181% +16.6244% +1.2857%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 44504 45154 +4998 +3609 +5111 +5261 +650 +12.4465% +8.6870% +12.7638% +13.1878% +1.4605%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7199 7051 +3385 +3102 +2842 +2805 -148 +92.3350% +78.5515% +67.5220% +66.0622% -2.0558%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 7756 7732 +2433 +2121 +1877 +1666 -24 +45.9143% +37.8007% +32.0581% +27.4646% -0.3094%
SCP_Astral_250pg_3ms 675 721 908 879 3595 3924 +3249 +3203 +3016 +3045 +329 +481.3333% +444.2441% +332.1586% +346.4164% +9.1516%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 5562 5543 +4107 +3805 +3398 +3380 -19 +286.0028% +218.9298% +158.4149% +156.2644% -0.3416%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 11774 11757 +3963 +3785 +3505 +3351 -17 +50.8468% +47.4787% +42.4746% +39.8644% -0.1444%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 11262 11679 +2521 +2337 +2308 +2265 +417 +27.5278% +25.0161% +24.6292% +24.0599% +3.7027%
SCP_Astral_500pg_3ms 1846 2600 2586 7448 7455 +5609 +4855 +4869 +7 +303.8462% +186.7308% +188.2831% +0.0940%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 10188 10330 +6456 +6175 +5556 +5525 +142 +166.6495% +148.6161% +116.3804% +114.9844% +1.3938%
SCP_Astral_MBR 24110 24991 24570 24544 28870 29202 +5092 +4211 +4632 +4658 +332 +21.1199% +16.8501% +18.8523% +18.9782% +1.1500%
Seer_Astral_45 69584 90103 87204 87620 88560
Seer_Astral_single 56699 55793 55891 58025 58866 +2167 +3073 +2975 +841 +3.8219% +5.5079% +5.3229% +1.4494%
YEAST_KO_Astral 66823 87888 87428 86498 84463
EWZ_2P_MBR_Exploris 55271 59611 60037 +4766 +426 +8.6230% +0.7146%
EWZ_2P_MBR_Exploris_Human 48465 52005 52461 +3996 +456 +8.2451% +0.8768%
EWZ_2P_MBR_Exploris_YeastHuman 51246 55877 56130 +4884 +253 +9.5305% +0.4528%
MacCoss_Eclipse_Normalization_noNorm 73278 78120 78333 +5055 +213 +6.8984% +0.2727%
MacCoss_Eclipse_Normalization_yesNorm 73278 78120 78333 +5055 +213 +6.8984% +0.2727%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 630477
KEAP1KO_Eclipse 87920 92888 93982 93441 89619 89864 +1944 -3024 -4118 -3577 +245 +2.2111% -3.2555% -4.3817% -3.8281% +0.2734%
MTAC_3P_Alternating 63773 63974 63611 63015 65078 65014 +1241 +1040 +1403 +1999 -64 +1.9460% +1.6257% +2.2056% +3.1723% -0.0983%
MTAC_3P_Standard 64317 64464 64219 63385 65667 65707 +1390 +1243 +1488 +2322 +40 +2.1612% +1.9282% +2.3171% +3.6633% +0.0609%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12564 12504 +437 +534 +564 -60 +3.6214% +4.4612% +4.7236% -0.4776%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12801 12780 +348 +309 +418 +452 -21 +2.7992% +2.4777% +3.3813% +3.6665% -0.1640%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12487 12473 +465 +426 +513 +505 -14 +3.8724% +3.5362% +4.2893% +4.2196% -0.1121%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12856 12921 +360 +456 +444 +511 +65 +2.8660% +3.6582% +3.5585% +4.1176% +0.5056%
Olsen_Astral_3P 236395 245756 242430 240719 237342
Olsen_Exploris_3P 146224 153534 153990 155827 155394 154931 +8707 +1397 +941 -896 -463 +5.9546% +0.9099% +0.6111% -0.5750% -0.2980%
SCIEX_3P 70810 74366 72157 71550 73172
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10883 10757 +1594 +1229 +1172 +1423 -126 +17.3960% +12.8988% +12.2274% +15.2453% -1.1578%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 10595 10711 +1413 +950 +1299 +1158 +116 +15.1968% +9.7326% +13.8015% +12.1218% +1.0949%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 8821 8763 +6313 +2679 +2516 +2647 -58 +257.6735% +44.0335% +40.2753% +43.2799% -0.6575%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6131 6112 +1409 +1524 +1154 +1189 -19 +29.9596% +33.2171% +23.2755% +24.1519% -0.3099%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16853 17058 +868 +778 +1033 +1003 +205 +5.3613% +4.7789% +6.4462% +6.2473% +1.2164%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14483 14489 +890 +648 +801 +818 +6 +6.5446% +4.6817% +5.8518% +5.9835% +0.0414%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16887 17158 +906 +882 +1041 +1233 +271 +5.5747% +5.4190% +6.4590% +7.7425% +1.6048%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17617 17887 +870 +709 +974 +1142 +270 +5.1125% +4.1274% +5.7589% +6.8199% +1.5326%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 4941 4922 +1275 +1009 +1058 +1383 -19 +34.9602% +25.7858% +27.3810% +39.0788% -0.3845%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5427 5371 +1071 +768 +574 +394 -56 +24.9070% +16.6848% +11.9658% +7.9164% -1.0319%
SCP_Astral_250pg_3ms 576 22 936 741 2680 2455 +1879 +2433 +1519 +1714 -225 +326.2153% +11059.0909% +162.2863% +231.3090% -8.3955%
SCP_Astral_250pg_6ms 637 2080 2029 2046 3771 3961 +3324 +1881 +1932 +1915 +190 +521.8210% +90.4327% +95.2193% +93.5973% +5.0385%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7435 7355 +1110 +1009 +1339 +1228 -80 +17.7742% +15.8998% +22.2573% +20.0424% -1.0760%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7593 7565 +843 +836 +553 +542 -28 +12.5409% +12.4238% +7.8865% +7.7175% -0.3688%
SCP_Astral_500pg_3ms 982 2365 2177 4719 4845 +3863 +2480 +2668 +126 +393.3809% +104.8626% +122.5540% +2.6701%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 6659 6520 +2812 +2513 +2475 +2602 -139 +75.8360% +62.7152% +61.1867% +66.4114% -2.0874%
SCP_Astral_MBR 20165 20129 20074 19793 20378 20309 +144 +180 +235 +516 -69 +0.7141% +0.8942% +1.1707% +2.6070% -0.3386%
Seer_Astral_45 225377 241455 241952 237727 233526
Seer_Astral_single 4685 4700 4632 4849 4911 +226 +211 +279 +62 +4.8239% +4.4894% +6.0233% +1.2786%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1339502
EWZ_2P_MBR_Exploris 245259 244802 244252 -1007 -550 -0.4106% -0.2247%
EWZ_2P_MBR_Exploris_Human 115447 114079 114319 -1128 +240 -0.9771% +0.2104%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130613 130045 +1077 -568 +0.8351% -0.4349%
MacCoss_Eclipse_Normalization_noNorm 178174 187043 186777 +8603 -266 +4.8284% -0.1422%
MacCoss_Eclipse_Normalization_yesNorm 178174 187043 186777 +8603 -266 +4.8284% -0.1422%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6583
KEAP1KO_Eclipse 7845 8175 8155 8203 8224 8263 +418 +88 +108 +60 +39 +5.3282% +1.0765% +1.3243% +0.7314% +0.4742%
MTAC_3P_Alternating 11361 11494 11351 11338 11831 11845 +484 +351 +494 +507 +14 +4.2602% +3.0538% +4.3520% +4.4717% +0.1183%
MTAC_3P_Standard 11473 11560 11477 11396 12025 11991 +518 +431 +514 +595 -34 +4.5149% +3.7284% +4.4785% +5.2211% -0.2827%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4354 4324 +196 +232 +224 -30 +4.7481% +5.6696% +5.4634% -0.6890%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4404 4404 +189 +156 +186 +190 +0 +4.4840% +3.6723% +4.4097% +4.5088% +0%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4321 4317 +242 +183 +227 +220 -4 +5.9387% +4.4267% +5.5501% +5.3698% -0.0926%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4397 4436 +187 +199 +192 +205 +39 +4.4010% +4.6967% +4.5240% +4.8452% +0.8870%
Olsen_Astral_3P 13820 14378 14293 14296 14381
Olsen_Exploris_3P 7255 7582 7340 7479 7744 7722 +467 +140 +382 +243 -22 +6.4369% +1.8465% +5.2044% +3.2491% -0.2841%
SCIEX_3P 8652 9109 8679 8618 9355
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3916 3844 +599 +455 +433 +526 -72 +18.4592% +13.4258% +12.6942% +15.8529% -1.8386%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3764 3807 +553 +374 +516 +373 +43 +16.9945% +10.8943% +15.6791% +10.8620% +1.1424%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3262 3253 +803 +857 +803 +856 -9 +32.7755% +35.7679% +32.7755% +35.7113% -0.2759%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3259 3243 +735 +807 +609 +601 -16 +29.3062% +33.1281% +23.1207% +22.7479% -0.4909%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5846 5934 +355 +278 +430 +388 +88 +6.3631% +4.9151% +7.8125% +6.9960% +1.5053%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5069 5066 +345 +228 +283 +255 -3 +7.3078% +4.7127% +5.9168% +5.3004% -0.0592%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5893 5976 +365 +321 +380 +423 +83 +6.5051% +5.6764% +6.7906% +7.6175% +1.4085%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6105 6238 +392 +289 +395 +433 +133 +6.7054% +4.8580% +6.7602% +7.4591% +2.1785%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1855 1832 +540 +408 +426 +544 -23 +41.7957% +28.6517% +30.2987% +42.2360% -1.2399%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1982 1945 +377 +285 +187 +72 -37 +24.0434% +17.1687% +10.6371% +3.8441% -1.8668%
SCP_Astral_250pg_3ms 307 8 350 283 1112 1051 +744 +1043 +701 +768 -61 +242.3453% +13037.5000% +200.2857% +271.3781% -5.4856%
SCP_Astral_250pg_6ms 637 756 751 766 1449 1532 +895 +776 +781 +766 +83 +140.5024% +102.6455% +103.9947% +100% +5.7281%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2723 2652 +445 +377 +483 +422 -71 +20.1631% +16.5714% +22.2683% +18.9238% -2.6074%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2749 2739 +336 +351 +262 +200 -10 +13.9825% +14.6985% +10.5773% +7.8771% -0.3638%
SCP_Astral_500pg_3ms 525 902 828 1832 1882 +1357 +980 +1054 +50 +258.4762% +108.6475% +127.2947% +2.7293%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2446 2401 +1083 +954 +915 +966 -45 +82.1700% +65.9295% +61.5747% +67.3171% -1.8397%
SCP_Astral_MBR 4708 4720 4712 4715 4934 4940 +232 +220 +228 +225 +6 +4.9278% +4.6610% +4.8387% +4.7720% +0.1216%
Seer_Astral_45 5802 6297 6122 6133 6123
Seer_Astral_single 4685 4700 4632 4849 4911 +226 +211 +279 +62 +4.8239% +4.4894% +6.0233% +1.2786%
YEAST_KO_Astral 4565 4795 4676 4673 4730
EWZ_2P_MBR_Exploris 7041 7029 7028 -13 -1 -0.1846% -0.0142%
EWZ_2P_MBR_Exploris_Human 6167 6076 6109 -58 +33 -0.9405% +0.5431%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6956 6943 +56 -13 +0.8131% -0.1869%
MacCoss_Eclipse_Normalization_noNorm 5804 6128 6100 +296 -28 +5.0999% -0.4569%
MacCoss_Eclipse_Normalization_yesNorm 5804 6128 6100 +296 -28 +5.0999% -0.4569%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 630467
KEAP1KO_Eclipse 89599 89840 +241
MTAC_3P_Alternating 65077 65007 -70
MTAC_3P_Standard 65657 65697 +40
MTAC_Yeast_Alternating_3min 12558 12489 -69
MTAC_Yeast_Alternating_5min 12789 12771 -18
MTAC_Yeast_Standard_3min 12476 12467 -9
MTAC_Yeast_Standard_5min 12851 12918 +67
Olsen_Astral_3P 237315
Olsen_Exploris_3P 155392 154930 -462
SCIEX_3P 73165
SCP_Astral_1000pg_12ms 10883 10756 -127
SCP_Astral_1000pg_24ms 10595 10711 +116
SCP_Astral_1000pg_3ms 8821 8761 -60
SCP_Astral_1000pg_6ms 6125 6108 -17
SCP_Astral_10ng_12ms 16852 17056 +204
SCP_Astral_10ng_24ms 14483 14489 +6
SCP_Astral_10ng_3ms 16884 17153 +269
SCP_Astral_10ng_6ms 17617 17886 +269
SCP_Astral_250pg_12ms 4939 4922 -17
SCP_Astral_250pg_24ms 5427 5371 -56
SCP_Astral_250pg_3ms 2680 2454 -226
SCP_Astral_250pg_6ms 3771 3961 +190
SCP_Astral_500pg_12ms 7435 7355 -80
SCP_Astral_500pg_24ms 7593 7565 -28
SCP_Astral_500pg_3ms 4719 4843 +124
SCP_Astral_500pg_6ms 6659 6519 -140
SCP_Astral_MBR 20378 20309 -69
Seer_Astral_45 233525
Seer_Astral_single 4849 4911 +62
YEAST_KO_Astral 1339497
EWZ_2P_MBR_Exploris 244790 244243 -547
EWZ_2P_MBR_Exploris_Human 114069 114313 +244
EWZ_2P_MBR_Exploris_YeastHuman 130608 130043 -565
MacCoss_Eclipse_Normalization_noNorm 187042 186776 -266
MacCoss_Eclipse_Normalization_yesNorm 187042 186776 -266

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0015 -0.0011 +0.0000 +0.0004
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0008 -0.0009 -0.0002 -0.0000
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0013 -0.0015 -0.0010 -0.0014 -0.0005 -0.0008 -0.0002
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0016 -0.0016 -0.0002 -0.0020 -0.0010 -0.0009 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0019 -0.0019 -0.0004 -0.0000 +0.0007 -0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0010 -0.0014 -0.0010 -0.0002 -0.0000 +0.0000 -0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0022 -0.0003 -0.0008 -0.0009 -0.0001 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0011 -0.0013 -0.0003 +0.0006 +0.0011 -0.0003
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0008 -0.0008 -0.0014 +0.0000
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0004 0.0000 +0.0002 -0.0002 +0.0011 -0.0004 -0.0004
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0031 -0.0022 +0.0001 +0.0007 +0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0000 -0.0002 +0.0052 +0.0031 +0.0030 +0.0044 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0017 -0.0013 +0.0017 +0.0035 +0.0017 +0.0026 -0.0029
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0021 -0.0027 -0.0024 -0.0016 +0.0009 -0.0001 -0.0006
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0016 -0.0019 +0.0003 -0.0003 +0.0005 -0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0019 -0.0020 +0.0000 -0.0029 -0.0005 -0.0007 -0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0010 -0.0014 +0.0011 +0.0013 +0.0005 +0.0004 -0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0011 -0.0005 +0.0003 -0.0006 +0.0016 +0.0007 +0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0015 0.0033 +0.0072 +0.0073 +0.0030 +0.0085 +0.0018
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0021 -0.0003 -0.0001 +0.0009 +0.0021 +0.0028 +0.0018
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 -0.0011 -0.0012 +0.0057 -0.0012 -0.0000
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0019 -0.0016 +0.0035 +0.0010 +0.0034 +0.0003
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0032 -0.0008 +0.0013 +0.0002 +0.0019 +0.0018 +0.0023
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0017 0.0007 +0.0020 +0.0031 +0.0020 +0.0018 -0.0010
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0011 0.0017 +0.0030 +0.0040 +0.0052 +0.0006
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0004 -0.0003 +0.0028 +0.0030 +0.0012 -0.0008
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 -0.0013 +0.0013 +0.0006 +0.0001 +0.0009 -0.0004
Seer_Astral_45_Entrapment -0.0023 -0.0008
Seer_Astral_single_Entrapment -0.0022 -0.0001 0.0005 +0.0027 +0.0006
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0024
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0015 -0.0004 +0.0022 +0.0010
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0046 -0.0045 -0.0016 +0.0001
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0037 -0.0042 -0.0032 -0.0031 -0.0047 -0.0049 -0.0005
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0044 -0.0020 -0.0007 +0.0005 +0.0009 +0.0005 +0.0024
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0038 +0.0028 +0.0015 +0.0010 -0.0010
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 0.0007 -0.0014 +0.0028 +0.0025 +0.0035 +0.0020 -0.0021
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0052 -0.0055 +0.0004 -0.0007 -0.0035 -0.0027 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0009 -0.0009 +0.0027 +0.0036 +0.0047 +0.0000
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0042 -0.0044 -0.0042 -0.0002
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0031
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0025 +0.0004 -0.0024 +0.0003 -0.0017 -0.0008
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0041
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0032 -0.0032 +0.0017 +0.0010 +0.0010 +0.0000
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 0.0033 -0.0033 +0.0037 +0.0026 +0.0037 +0.0038 -0.0065
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0004 -0.0032 +0.0027 +0.0027 +0.0040 +0.0040 -0.0036
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0025 -0.0047 -0.0029 +0.0003 -0.0004 -0.0002 -0.0022
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0066 -0.0060 -0.0005 -0.0020 -0.0006 +0.0006
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0032 -0.0043 -0.0010 -0.0020 -0.0026 +0.0002 -0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0021 -0.0019 +0.0018 +0.0054 +0.0047 +0.0042 +0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0038 +0.0017 -0.0018 +0.0016 +0.0009 -0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0041 -0.0006 +0.0047 +0.0070 +0.0028 +0.0058 -0.0047
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0024 -0.0012 +0.0030 +0.0030 +0.0014 +0.0001 +0.0013
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0053 -0.0000 +0.0028 -0.0000 +0.0085 -0.0000 -0.0053
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0000 0.0045 +0.0144 +0.0112 +0.0130 +0.0133 +0.0045
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0017 0.0000 +0.0036 +0.0040 -0.0014 +0.0020 -0.0017
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0013 -0.0004 +0.0016 -0.0003 +0.0047 +0.0057 +0.0009
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0031 -0.0069 -0.0028 -0.0140 -0.0089 -0.0068 -0.0101
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0000 -0.0025 +0.0019 +0.0020 -0.0018 +0.0030 -0.0025
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0028 0.0004 +0.0064 +0.0034 +0.0030 +0.0054 +0.0033
Seer_Astral_45_Entrapment -0.0049 -0.0047
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0017 +0.0091 +0.0017
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0004
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0009 -0.0004 +0.0009 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0006 -0.0006 -0.0004 -0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0007 -0.0008 -0.0007 -0.0011 -0.0006 -0.0007 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0007 +0.0002 -0.0009 -0.0003 -0.0004 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0013 -0.0010 -0.0000 +0.0003 +0.0004 +0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0008 -0.0005 -0.0001 +0.0001 -0.0000 -0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0014 -0.0015 -0.0007 -0.0008 -0.0007 -0.0005 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0009 -0.0007 +0.0001 +0.0003 +0.0007 +0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0002 -0.0001 0.0000 -0.0002 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0006
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0003 0.0003 +0.0007 -0.0002 +0.0009 +0.0003 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0022 -0.0014 +0.0001 +0.0015 +0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0003 -0.0005 +0.0040 +0.0023 +0.0026 +0.0032 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 0.0017 -0.0004 +0.0016 +0.0025 +0.0022 +0.0022 -0.0021
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0013 -0.0022 -0.0024 -0.0016 +0.0006 +0.0002 -0.0009
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0012 -0.0015 +0.0002 -0.0005 +0.0001 -0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0013 -0.0011 +0.0003 -0.0015 +0.0001 -0.0003 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0008 -0.0010 +0.0010 +0.0010 +0.0006 +0.0005 -0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0012 -0.0006 -0.0001 -0.0008 +0.0006 +0.0003 +0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0020 0.0019 +0.0049 +0.0046 +0.0022 +0.0051 -0.0001
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0012 -0.0004 +0.0003 +0.0004 +0.0009 +0.0010 +0.0008
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0006 -0.0001 +0.0058 -0.0001 -0.0008
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0000 -0.0001 +0.0036 +0.0021 +0.0030 -0.0000
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0010 0.0002 +0.0020 +0.0005 +0.0022 +0.0015 +0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0014 0.0010 +0.0026 +0.0027 +0.0027 +0.0026 -0.0005
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0007 0.0025 +0.0006 +0.0028 +0.0040 +0.0018
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0011 -0.0009 +0.0017 +0.0010 +0.0001 -0.0020
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0003 -0.0000 +0.0017 +0.0015 +0.0008 +0.0013 +0.0003
Seer_Astral_45_Entrapment -0.0011 -0.0003
Seer_Astral_single_Entrapment -0.0022 -0.0001 0.0005 +0.0027 +0.0006
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0016
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0002 0.0003 +0.0015 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0026 -0.0025 -0.0008 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0019 -0.0024 -0.0022 -0.0021 -0.0026 -0.0026 -0.0005
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0019 -0.0009 -0.0001 +0.0005 +0.0012 +0.0010 +0.0010
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0003 -0.0018 +0.0018 +0.0016 +0.0011 -0.0015
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 0.0005 -0.0005 +0.0032 +0.0017 +0.0020 +0.0008 -0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0028 -0.0024 +0.0014 +0.0011 -0.0010 -0.0008 +0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0014 -0.0009 +0.0014 +0.0018 +0.0029 +0.0006
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0025 -0.0021 -0.0004
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0018
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0015 -0.0018 +0.0008 -0.0024 -0.0001 -0.0002 -0.0003
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0023
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0021 -0.0022 +0.0015 +0.0001 +0.0010 -0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 0.0013 -0.0032 +0.0016 +0.0023 +0.0026 +0.0011 -0.0045
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0010 -0.0030 +0.0013 +0.0003 +0.0010 +0.0000 -0.0041
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0022 -0.0038 -0.0014 -0.0003 +0.0002 +0.0002 -0.0016
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0045 +0.0002 -0.0014 -0.0003 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0031 -0.0041 -0.0009 -0.0027 -0.0026 -0.0015 -0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0023 -0.0018 +0.0003 +0.0028 +0.0019 +0.0014 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0028 +0.0011 -0.0009 +0.0010 +0.0001 +0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0039 0.0011 +0.0050 +0.0052 +0.0031 +0.0042 -0.0027
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0018 -0.0011 +0.0003 +0.0021 -0.0007 -0.0010 +0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0014 -0.0005 +0.0055 +0.0077 +0.0042 -0.0005 -0.0019
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0016 0.0049 +0.0149 +0.0117 +0.0104 +0.0096 +0.0064
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0023 0.0002 +0.0041 +0.0037 +0.0009 +0.0029 -0.0021
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0013 0.0012 +0.0032 +0.0012 +0.0056 +0.0057 +0.0025
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0021 -0.0058 -0.0026 -0.0125 -0.0087 -0.0062 -0.0080
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0007 -0.0009 +0.0010 +0.0013 -0.0018 +0.0019 -0.0003
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0027 -0.0002 +0.0022 +0.0015 +0.0020 +0.0026 +0.0025
Seer_Astral_45_Entrapment -0.0029 -0.0010
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0017 +0.0091 +0.0017
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 2195 6950 -17445 +4755

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -19 114 -657 +133

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0164 -0.0152 +0.0164

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 110 -112 -956 -222

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -8 -40 -230 -32

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 14 14 +4 +1 +1 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 10 +4 +0 +1 -3 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 12 14 +3 +0 +1 -2 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 0 2 +0 +1 +0 -2 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 0 1 +0 +1 +0 -2 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 1 +0 +1 -1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1634 0.1662 +0.0203 +0.0241 +0.0261 +0.0288 +0.0027
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1552 0.1570 +0.0177 +0.0207 +0.0218 +0.0246 +0.0018
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1576 0.1609 +0.0153 +0.0185 +0.0201 +0.0033
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1474 0.1508 -0.0023 +0.0099 +0.0132 +0.0152 +0.0035
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1685 0.1674 -0.0023 +0.0035 +0.0059 +0.0075 -0.0011
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1445 0.1454 -0.0049 +0.0088 +0.0117 +0.0131 +0.0008
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1527 +0.0047 +0.0028 +0.0032 +0.0022 -0.0004
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1536
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5931 0.5935 +0.0066 +0.0005
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2012 0.2031 +0.0314 +0.0019

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0841 0.0854 +0.0090 +0.0115 +0.0127 +0.0133 +0.0013
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0803 0.0809 +0.0086 +0.0106 +0.0109 +0.0121 +0.0006
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0737 0.0739 +0.0066 +0.0079 +0.0081 +0.0002
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0649 0.0656 -0.0122 +0.0053 +0.0064 +0.0068 +0.0007
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0787 0.0790 -0.0003 +0.0033 +0.0037 +0.0017 +0.0002
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0632 0.0634 -0.0136 +0.0067 +0.0065 +0.0066 +0.0002
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0470
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0987 0.0986 -0.0042 -0.0033 -0.0050 -0.0041 -0.0001
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1012
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5808 0.5802 -0.0079 -0.0006
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1362 0.1369 +0.0136 +0.0007

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0035 -0.0011 -0.0020 +0.0070 +0.0012 -0.0742 -0.0023
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0146 -0.0126 -0.0076 +0.0055 -0.0002 -0.0262 -0.0020
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0075 -0.0071 +0.0007 -0.0023 -0.0001 +0.0066 -0.0004
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0726 -0.0729 +0.0012 -0.0008 +0.0020 -0.0543 +0.0003
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0707 -0.0701 -0.0054 -0.0006 -0.0003 -0.0015 -0.0006
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0577 -0.0572 -0.0080 +0.0050 -0.0016 +0.0286 -0.0005
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0481 +0.0114 +0.0329 -0.0052 -0.0480
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1834 +0.0115 +0.0151 +0.0011 -0.0457
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1791 -0.0082 +0.0282 -0.0195 +0.1593
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0329 +0.0067 +0.0305 +0.0014 -0.0093
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3275 +0.0081 +0.0093 -0.0002 -0.0154
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1236 -0.0024 -0.0402 -0.0016 +0.0901
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1225 +0.0108 -0.0145 +0.0012 +0.0495
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2185 +0.0015 +0.0038 -0.0038 -0.0093
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2388 +0.0262 -0.0191 +0.0011 +0.0365
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1347 0.1282 -0.0059 -0.0059 +0.0211 -0.1017 -0.0065
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0842 -0.0847 +0.0062 +0.0047 -0.0191 +0.0237 +0.0005
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2015 0.1991 +0.0183 -0.0240 +0.0287 -0.0770 -0.0024
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1038 0.1046 +0.0048 -0.0054 -0.0067 +0.0156 +0.0008
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0485 +0.0009 +0.0001 -0.0089 +0.0026 +0.0004
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2149 0.2152 +0.0051 -0.0017 +0.0004 +0.0113 +0.0003
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1482 0.1456 -0.0032 -0.0062 -0.0160 +0.1258 -0.0026
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0795 -0.0776 +0.0043 -0.0045 -0.0054 -0.0225 -0.0019
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0442 0.0460 +0.0169 -0.0238 +0.0355 -0.0523 +0.0018
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0335 +0.0195 +0.0041 +0.0006 -0.0438
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 0.0007 -0.0031 +0.0125 +0.0006 -0.0674
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0303 -0.0051 -0.0071 +0.0012 +0.0267
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0765 +0.0119 -0.0026 -0.0002 +0.0340
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0248
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0149 -0.0331 +0.0073 +0.0004 -0.0081
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0564
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1523 -0.0356 -0.0145 +0.0024 +0.0936
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1005 -0.0468 -0.0064 -0.0010 +0.0637

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0080 0.0006 +0.0009 +0.0076 -0.0005 -0.0653 -0.0074
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0148 -0.0125 -0.0089 +0.0045 +0.0004 -0.0263 -0.0023
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0007 0.0010 +0.0054 -0.0044 +0.0010 -0.0029 +0.0002
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0693 -0.0721 +0.0013 +0.0005 -0.0055 -0.0513 +0.0028
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0694 -0.0709 -0.0060 -0.0005 -0.0005 -0.0007 +0.0015
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0546 -0.0555 -0.0084 +0.0078 -0.0007 +0.0236 +0.0009
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0517 +0.0142 +0.0365 -0.0057 -0.0387
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1335 +0.0050 +0.0043 -0.0072 -0.0299
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1920 -0.0338 -0.0246 +0.0154 +0.1748
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0269 +0.0064 +0.0290 +0.0021 -0.0255
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3006 +0.0072 +0.0066 -0.0010 -0.0050
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1154 +0.0002 -0.0402 -0.0012 +0.0866
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1070 +0.0124 -0.0135 -0.0021 +0.0560
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1976 -0.0003 +0.0009 -0.0042 +0.0019
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2026 +0.0289 -0.0188 +0.0012 +0.0223
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1578 0.1527 -0.0077 -0.0028 +0.0144 -0.0633 -0.0051
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0767 -0.0818 +0.0048 +0.0016 -0.0170 +0.0210 +0.0051
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2340 0.2381 +0.0504 -0.0481 +0.0073 -0.0314 +0.0041
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.1002 0.1007 +0.0031 -0.0032 -0.0081 +0.0243 +0.0005
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0438 -0.0452 +0.0011 -0.0008 -0.0084 +0.0017 +0.0014
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2253 0.2253 +0.0036 -0.0008 +0.0016 +0.0220 +0.0000
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1313 0.1365 +0.0005 -0.0096 -0.0297 +0.1267 +0.0052
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0800 -0.0760 +0.0056 -0.0034 -0.0033 -0.0285 -0.0040
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0598 0.0672 +0.0405 -0.0089 +0.0322 -0.0574 +0.0074
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0499 +0.0258 +0.0029 -0.0003 -0.0201
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0205 -0.0049 +0.0142 +0.0054 -0.0473
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0264 -0.0001 -0.0108 +0.0000 +0.0223
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0819 +0.0137 -0.0048 +0.0001 +0.0412
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0977 -0.0232 +0.0027 +0.0012 +0.0352
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0176 -0.0350 +0.0076 +0.0002 -0.0041
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0664 +0.0131 -0.0109 +0.0003 +0.0548
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1598 -0.0435 -0.0160 +0.0023 +0.1020
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0931 -0.0508 -0.0078 +0.0009 +0.0488

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1258 0.1307 +0.0343 +0.0202 -0.0086 -0.1820 +0.0048
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1101 0.1172 +0.0169 -0.0058 +0.0004 -0.0998 +0.0071
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1125 0.1191 +0.0117 -0.0078 +0.0011 -0.1483 +0.0066
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1308 0.1355 +0.0441 -0.0007 -0.0136 -0.1672 +0.0047
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1234 0.1283 +0.0164 -0.0031 -0.0002 -0.0959 +0.0049
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1269 0.1300 +0.0170 -0.0063 +0.0017 -0.1411 +0.0031
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1721 +0.0354 +0.0384 -0.0420 -0.4036
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2153 +0.0422 -0.0321 -0.0167 -0.1348
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3083 +0.2175 -0.0279 -0.1166 -0.9328
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1373 +0.0427 +0.0074 -0.0036 -0.1191
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2297 +0.0473 +0.0030 -0.0078 -0.1059
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1773 +0.0549 +0.0262 -0.0056 -0.2028
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1390 +0.0358 +0.0129 -0.0110 -0.1925
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1927 +0.0274 +0.0045 -0.0018 -0.0927
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1932 +0.0778 +0.0001 -0.0169 -0.3452
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.2070 0.1940 +0.0445 +0.0761 -0.1281 -0.3638 -0.0131
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0477 0.0494 -0.0103 +0.0134 -0.0147 -0.1035 +0.0017
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2703 0.3431 -0.0030 +0.1483 +0.0078 -0.6872 +0.0728
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1850 0.1834 +0.0037 +0.0045 +0.0051 -0.1654 -0.0016
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0420 0.0436 +0.0676 -0.0087 -0.0168 -0.1098 +0.0016
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1833 0.1830 +0.0316 +0.0062 -0.0049 -0.1521 -0.0003
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2082 0.2012 -0.0093 +0.0378 -0.0706 -0.3686 -0.0070
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0563 0.0545 +0.0977 -0.0155 +0.0159 -0.1915 -0.0018
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3837 0.3563 +0.0737 +0.1982 -0.0827 -0.8914 -0.0275
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1070 +0.0321 -0.0450 -0.0051 -0.3757
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1330 +0.0200 -0.0293 -0.0344 -0.4089
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0731 +0.0068 -0.0387 -0.0080 -0.0336
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0861 +0.0190 -0.0584 -0.0028 -0.0659
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0956 +0.0281 -0.0478 -0.0031 -0.0987
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0875 +0.0273 -0.0601 -0.0037 -0.0465
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0890 +0.0130 -0.0614 -0.0008 -0.0959
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1480 +0.0619 -0.0455 -0.0143 -0.4260
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1024 +0.0688 -0.0494 -0.0103 -0.3948

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0673 0.0641 +0.0149 -0.0182 -0.0054 -0.0534 -0.0032
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0360 0.0354 +0.0035 +0.0005 +0.0043 -0.0455 -0.0006
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0437 0.0460 -0.0157 -0.0104 +0.0083 -0.0685 +0.0023
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0471 0.0496 -0.0042 +0.0002 -0.0084 -0.0725 +0.0025
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0368 0.0379 +0.0032 -0.0030 +0.0035 -0.0348 +0.0011
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0486 0.0479 +0.0000 +0.0073 -0.0081 -0.0769 -0.0007
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0796 +0.0402 -0.0136 +0.0467 -0.1860
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0780 +0.0316 -0.0208 -0.0112 -0.0306
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1184 +0.1306 -0.0136 -0.0647 -0.2744
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0243 +0.0032 +0.0034 -0.0021 -0.0222
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0441 +0.0110 -0.0047 +0.0013 -0.0184
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0244 +0.0055 -0.0000 +0.0038 -0.0376
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0277 +0.0026 +0.0079 -0.0036 -0.0354
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0098
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0353 +0.0296 -0.0022 -0.0025 -0.0855
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0517 0.0483 +0.0146 +0.0452 -0.0355 -0.1759 -0.0035
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0188 0.0189 -0.0057 -0.0062 -0.0031 -0.0297 +0.0000
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0643 0.0711 -0.1294 +0.1626 +0.0090 -0.4363 +0.0069
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0327 0.0339 -0.0046 +0.0074 +0.0016 -0.0363 +0.0012
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0095 0.0089 +0.0109 -0.0066 +0.0090 -0.0338 -0.0007
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0368 0.0345 -0.0053 +0.0093 +0.0025 -0.0455 -0.0023
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0636 0.0624 -0.0166 +0.0170 -0.0166 -0.1538 -0.0012
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0207 0.0195 +0.0068 -0.0006 -0.0039 -0.0531 -0.0011
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1671 0.1453 -0.0891 -0.0032 -0.0082 -0.2633 -0.0219
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0496 +0.0682 -0.0593 -0.0056 -0.1728
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0620 +0.0668 -0.0849 -0.0031 -0.1815
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0330 +0.0113 -0.0357 +0.0198 -0.0198
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0246 -0.0054 -0.0154 +0.0040 -0.0242
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0269 -0.0011 -0.0225 +0.0112 -0.0339
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0236 +0.0094 -0.0181 -0.0013 -0.0221
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0373 -0.0134 -0.0199 -0.0090 -0.0302
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0432 +0.0271 -0.0671 +0.0055 -0.2161
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0427 +0.0501 -0.0498 +0.0220 -0.2327

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 119.5600
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 16.0500 15.5500 -8.5200 -1.7700 -4.3200 -1.5800 -0.5000 -35.3968% -10.2194% -21.7413% -9.2236% -3.1153%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.6100 7.2800 -5.4700 -1.7900 -1.0800 -2.0100 -1.3300 -42.9020% -19.7354% -12.9187% -21.6362% -15.4472%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.7400 6.9200 -5.3900 -2.0400 -2.7400 -3.8900 -0.8200 -43.7855% -22.7679% -28.3644% -35.9852% -10.5943%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.1100 4.4800 +0.2500 +0.0700 -0.4600 +0.3700 +5.9102% +1.5873% -9.3117% +9.0024%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.2700 4.2300 -1.1500 -0.1500 -0.5200 -0.3100 -0.0400 -21.3755% -3.4247% -10.9474% -6.8282% -0.9368%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.1000 4.3400 -1.0900 +0.2000 -0.1000 -0.3200 +0.2400 -20.0737% +4.8309% -2.2523% -6.8670% +5.8537%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5600 4.5300 -1.0200 +0.1100 +0 +0.0700 -0.0300 -18.3784% +2.4887% +0% +1.5695% -0.6579%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 21.8200
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 14.0700 13.9000 -13.7600 -5.8600 -4.4200 -5.3800 -0.1700 -49.7469% -29.6559% -24.1266% -27.9046% -1.2082%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 10.2600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3400 4.2100 -1.5800 -0.3800 -0.4400 +0.1200 -0.1300 -27.2884% -8.2789% -9.4624% +2.9340% -2.9954%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 4.6300 4.9800 -1.2800 +0.5800 -0.9000 +0.3500 -20.4473% +13.1818% -15.3061% +7.5594%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.4000 4.7600 +0.2400 +1.0300 -0.0400 +1.1200 +0.3600 +5.3097% +27.6139% -0.8333% +30.7692% +8.1818%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.1600 3.8200 -1.9200 +0.3100 -0.1000 +0.3800 -0.3400 -33.4495% +8.8319% -2.5510% +11.0465% -8.1731%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4300 5.6700 -1.4000 +0.1400 +0.1600 -0.0700 +0.2400 -19.8020% +2.5316% +2.9038% -1.2195% +4.4199%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.5500 5.5800 -2.0100 -0.1500 -0.5600 +0.0400 +0.0300 -26.4822% -2.6178% -9.1205% +0.7220% +0.5405%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2300 4.8300 -1.6200 +0.1600 +0.5300 +0.4200 -0.4000 -25.1163% +3.4261% +12.3256% +9.5238% -7.6482%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.8800 4.8300 -2.5500 -0.1000 +0.2000 -0.7900 -0.0500 -34.5528% -2.0284% +4.3197% -14.0569% -1.0246%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.3600 4.1400 -0.6000 +0.4800 +0.7500 -0.2200 -12.6582% +13.1148% +22.1239% -5.0459%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.3300 4.4800 -0.7800 +0.6400 +0.7200 +0.1500 -14.8289% +16.6667% +19.1489% +3.4642%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 4 3.7000 -0.9500 +0.2700 -0.0100 +0.2500 -0.3000 -20.4301% +7.8717% -0.2695% +7.2464% -7.5000%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.4700 4.1800 +0.0100 +0.8900 +0.4900 +0.9100 -0.2900 +0.2398% +27.0517% +13.2791% +27.8287% -6.4877%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2000 4.0500 -1.2300 +0.5200 +0.4500 +0.5600 -0.1500 -23.2955% +14.7309% +12.5000% +16.0458% -3.5714%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.2900 4.5200 -0.9900 +0.7000 +0.3700 -0.2900 +0.2300 -17.9673% +18.3246% +8.9157% -6.0291% +5.3613%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.4000 4.3900 -0.3400 +0.9300 +0.8200 -0.0100 -7.1882% +26.8786% +22.9692% -0.2273%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.7000 4.7600 +0.1100 +1.1400 +1.0300 +0.9800 +0.0600 +2.3656% +31.4917% +27.6139% +25.9259% +1.2766%
SCP_Astral_MBR 9.0400 6.5500 6.1000 6.7300 6.7500 -2.2900 +0.2000 +0.6500 +0.0200 -25.3319% +3.0534% +10.6557% +0.2972%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 85.2100
Seer_Astral_single 4.4700 4.1400 5.5800 5.2300 4.5700 +0.1000 +0.4300 -1.0100 -0.6600 +2.2371% +10.3865% -18.1004% -12.6195%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 114.6600
EWZ_2P_MBR_Exploris 26.1800 20.0200 20.1000 -6.0800 +0.0800 -23.2238% +0.3996%
EWZ_2P_MBR_Exploris_Human 12.9100 11.2900 11 -1.9100 -0.2900 -14.7947% -2.5686%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 12.3500 11.2700 -0.7900 -1.0800 -6.5506% -8.7449%
MacCoss_Eclipse_Normalization_noNorm 27.5100 26.9000 27.4000 -0.1100 +0.5000 -0.3999% +1.8587%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 27.3700 27.7100 +0.0400 +0.3400 +0.1446% +1.2422%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png