Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6780461
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1284406 1286476 +189982 -20529 -25479 -7065 +2070 +17.3263% -1.5707% -1.9421% -0.5462% +0.1612%
MTAC_3P_Alternating 586322 615762 610710 599881 617552 615279 +28957 -483 +4569 +15398 -2273 +4.9388% -0.0784% +0.7481% +2.5668% -0.3681%
MTAC_3P_Standard 596590 623022 617574 607435 624112 619679 +23089 -3343 +2105 +12244 -4433 +3.8702% -0.5366% +0.3408% +2.0157% -0.7103%
MTAC_Yeast_Alternating_3min 137548 136839 135560 143527 144563 +7015 +7724 +9003 +1036 +5.1000% +5.6446% +6.6413% +0.7218%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 162146 163506 +7865 +6955 +6997 +8471 +1360 +5.0533% +4.4426% +4.4707% +5.4639% +0.8388%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 144902 147362 +8853 +7977 +8070 +9477 +2460 +6.3916% +5.7230% +5.7936% +6.8731% +1.6977%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 163364 164923 +5961 +6191 +5763 +7001 +1559 +3.7500% +3.9003% +3.6209% +4.4332% +0.9543%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3430707
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1315141 1317108 +294372 +162439 +193235 +133024 +1967 +28.7828% +14.0680% +17.1937% +11.2343% +0.1496%
SCIEX_3P 672242 749525 722698 714454 737429
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 50408 51995 +11113 +10295 +9570 +9895 +1587 +27.1831% +24.6882% +22.5575% +23.5036% +3.1483%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 48770 50526 +9457 +8124 +8503 +9374 +1756 +23.0271% +19.1595% +20.2342% +22.7790% +3.6006%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 39091 40785 +32045 +17670 +17770 +17872 +1694 +366.6476% +76.4439% +77.2105% +77.9994% +4.3335%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 27013 28341 +11406 +10788 +9932 +9993 +1328 +67.3516% +61.4596% +53.9519% +54.4637% +4.9162%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 111950 114338 +14430 +11447 +15355 +15690 +2388 +14.4433% +11.1254% +15.5128% +15.9050% +2.1331%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 82425 84375 +13277 +11647 +12930 +13249 +1950 +18.6742% +16.0145% +18.0978% +18.6275% +2.3658%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 118105 121483 +15779 +14986 +15861 +17049 +3378 +14.9275% +14.0718% +15.0168% +16.3251% +2.8602%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 124016 126830 +11673 +9514 +12508 +13749 +2814 +10.1366% +8.1097% +10.9410% +12.1585% +2.2691%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 17755 18515 +8321 +7709 +7277 +7282 +760 +81.6264% +71.3400% +64.7535% +64.8268% +4.2805%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 19443 20372 +5565 +4939 +4331 +4673 +929 +37.5836% +32.0029% +26.9996% +29.7662% +4.7781%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 7838 8400 +7139 +6368 +5950 +6014 +562 +566.1380% +313.3858% +242.8571% +252.0536% +7.1702%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 13463 15101 +13665 +10318 +9411 +9370 +1638 +951.6017% +215.7223% +165.3954% +163.4968% +12.1667%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 30138 31518 +9808 +9623 +8938 +9055 +1380 +45.1773% +43.9507% +39.5837% +40.3107% +4.5789%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 29951 31075 +5215 +4932 +4815 +5450 +1124 +20.1663% +18.8655% +18.3359% +21.2683% +3.7528%
SCP_Astral_500pg_3ms 3484 6898 6834 17468 18435 +14951 +11537 +11601 +967 +429.1332% +167.2514% +169.7542% +5.5358%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 25826 26633 +15934 +15159 +13751 +13744 +807 +148.9298% +132.1161% +106.7458% +106.6336% +3.1248%
SCP_Astral_MBR 92167 93585 91884 90864 105889 107972 +15805 +14387 +16088 +17108 +2083 +17.1482% +15.3732% +17.5090% +18.8281% +1.9672%
Seer_Astral_45 2512737 3124006 3135497 2971207 3002843
Seer_Astral_single 56699 55793 55891 58025 59748 +3049 +3955 +3857 +1723 +5.3775% +7.0887% +6.9009% +2.9694%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17320764
EWZ_2P_MBR_Exploris 1776128 1855012 1859663 +83535 +4651 +4.7032% +0.2507%
EWZ_2P_MBR_Exploris_Human 836809 876894 880336 +43527 +3442 +5.2015% +0.3925%
EWZ_2P_MBR_Exploris_YeastHuman 914924 975923 974945 +60021 -978 +6.5602% -0.1002%
MacCoss_Eclipse_Normalization_noNorm 2078034 2237537 2244005 +165971 +6468 +7.9869% +0.2891%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2237537 2244005 +165971 +6468 +7.9869% +0.2891%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 113299
KEAP1KO_Eclipse 111504 133619 131359 132031 145905 147443 +35939 +13824 +16084 +15412 +1538 +32.2311% +10.3458% +12.2443% +11.6730% +1.0541%
MTAC_3P_Alternating 108267 117352 114659 114816 121363 122417 +14150 +5065 +7758 +7601 +1054 +13.0695% +4.3161% +6.7662% +6.6202% +0.8685%
MTAC_3P_Standard 110265 118693 115800 116148 122895 123260 +12995 +4567 +7460 +7112 +365 +11.7852% +3.8477% +6.4421% +6.1232% +0.2970%
MTAC_Yeast_Alternating_3min 48858 49032 48995 53863 55104 +6246 +6072 +6109 +1241 +12.7840% +12.3837% +12.4686% +2.3040%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 60319 61380 +7411 +6305 +5540 +5496 +1061 +13.7320% +11.4480% +9.9212% +9.8347% +1.7590%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 55005 56227 +7606 +6562 +5938 +5767 +1222 +15.6434% +13.2125% +11.8078% +11.4289% +2.2216%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 60460 62141 +7081 +6222 +5434 +5314 +1681 +12.8605% +11.1268% +9.5826% +9.3512% +2.7804%
Olsen_Astral_3P 198770 231103 234505 234149 237050
Olsen_Exploris_3P 51272 58784 55047 58593 70903 71840 +20568 +13056 +16793 +13247 +937 +40.1155% +22.2101% +30.5067% +22.6085% +1.3215%
SCIEX_3P 82206 93920 87927 87858 99825
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 19045 19915 +5475 +4957 +4666 +4208 +870 +37.9155% +33.1395% +30.5987% +26.7906% +4.5681%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 18005 18850 +4367 +3785 +3934 +3780 +845 +30.1526% +25.1245% +26.3744% +25.0829% +4.6931%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 15749 16505 +7765 +7129 +7116 +7141 +756 +88.8444% +76.0346% +75.7908% +76.2601% +4.8003%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 15297 16214 +7316 +6955 +6430 +6404 +917 +82.2207% +75.1161% +65.7195% +65.2803% +5.9946%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 40288 41512 +6647 +5215 +7170 +7087 +1224 +19.0650% +14.3676% +20.8782% +20.5868% +3.0381%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 29919 30870 +6221 +5404 +5751 +5647 +951 +25.2383% +21.2205% +22.8950% +22.3883% +3.1786%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 43088 44926 +8238 +7250 +7277 +7505 +1838 +22.4542% +19.2430% +19.3285% +20.0556% +4.2657%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 44504 45884 +5728 +4339 +5841 +5991 +1380 +14.2644% +10.4441% +14.5868% +15.0177% +3.1008%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7199 7588 +3922 +3639 +3379 +3342 +389 +106.9831% +92.1499% +80.2804% +78.7094% +5.4035%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 7756 8133 +2834 +2522 +2278 +2067 +377 +53.4818% +44.9474% +38.9069% +34.0752% +4.8608%
SCP_Astral_250pg_3ms 675 721 908 879 3595 3942 +3267 +3221 +3034 +3063 +347 +484% +446.7406% +334.1410% +348.4642% +9.6523%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 5562 6358 +4922 +4620 +4213 +4195 +796 +342.7577% +265.8228% +196.4103% +193.9436% +14.3114%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 11774 12423 +4629 +4451 +4171 +4017 +649 +59.3918% +55.8329% +50.5453% +47.7873% +5.5121%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 11262 11910 +2752 +2568 +2539 +2496 +648 +30.0502% +27.4888% +27.0942% +26.5137% +5.7539%
SCP_Astral_500pg_3ms 1846 2600 2586 7448 7874 +6028 +5274 +5288 +426 +326.5439% +202.8462% +204.4857% +5.7197%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 10188 10537 +6663 +6382 +5763 +5732 +349 +171.9928% +153.5981% +120.7164% +119.2924% +3.4256%
SCP_Astral_MBR 24110 24991 24570 24544 28870 29737 +5627 +4746 +5167 +5193 +867 +23.3389% +18.9908% +21.0297% +21.1579% +3.0031%
Seer_Astral_45 69584 90103 87204 87620 88560
Seer_Astral_single 56699 55793 55891 58025 59748 +3049 +3955 +3857 +1723 +5.3775% +7.0887% +6.9009% +2.9694%
YEAST_KO_Astral 66823 87888 87428 86498 84463
EWZ_2P_MBR_Exploris 55271 59611 61157 +5886 +1546 +10.6493% +2.5935%
EWZ_2P_MBR_Exploris_Human 48465 52005 53327 +4862 +1322 +10.0320% +2.5421%
EWZ_2P_MBR_Exploris_YeastHuman 51246 55877 56885 +5639 +1008 +11.0038% +1.8040%
MacCoss_Eclipse_Normalization_noNorm 73278 78120 78755 +5477 +635 +7.4743% +0.8129%
MacCoss_Eclipse_Normalization_yesNorm 73278 78120 78755 +5477 +635 +7.4743% +0.8129%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 630477
KEAP1KO_Eclipse 87920 92888 93982 93441 89619 90233 +2313 -2655 -3749 -3208 +614 +2.6308% -2.8583% -3.9891% -3.4332% +0.6851%
MTAC_3P_Alternating 63773 63974 63611 63015 65078 65191 +1418 +1217 +1580 +2176 +113 +2.2235% +1.9023% +2.4838% +3.4531% +0.1736%
MTAC_3P_Standard 64317 64464 64219 63385 65667 65596 +1279 +1132 +1377 +2211 -71 +1.9886% +1.7560% +2.1442% +3.4882% -0.1081%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12564 12545 +478 +575 +605 -19 +3.9612% +4.8037% +5.0670% -0.1512%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12801 12829 +397 +358 +467 +501 +28 +3.1934% +2.8707% +3.7777% +4.0639% +0.2187%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12487 12524 +516 +477 +564 +556 +37 +4.2971% +3.9595% +4.7157% +4.6457% +0.2963%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12856 12961 +400 +496 +484 +551 +105 +3.1845% +3.9791% +3.8791% +4.4400% +0.8167%
Olsen_Astral_3P 236395 245756 242430 240719 237342
Olsen_Exploris_3P 146224 153534 153990 155827 155394 156724 +10500 +3190 +2734 +897 +1330 +7.1808% +2.0777% +1.7754% +0.5756% +0.8559%
SCIEX_3P 70810 74366 72157 71550 73172
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10883 11262 +2099 +1734 +1677 +1928 +379 +22.9073% +18.1990% +17.4961% +20.6557% +3.4825%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 10595 11071 +1773 +1310 +1659 +1518 +476 +19.0686% +13.4208% +17.6264% +15.8903% +4.4927%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 8821 8801 +6351 +2717 +2554 +2685 -20 +259.2245% +44.6581% +40.8836% +43.9012% -0.2267%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6131 6292 +1589 +1704 +1334 +1369 +161 +33.7869% +37.1404% +26.9060% +27.8082% +2.6260%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16853 17162 +972 +882 +1137 +1107 +309 +6.0037% +5.4177% +7.0952% +6.8950% +1.8335%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14483 14577 +978 +736 +889 +906 +94 +7.1917% +5.3175% +6.4947% +6.6272% +0.6490%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16887 17244 +992 +968 +1127 +1319 +357 +6.1039% +5.9474% +6.9926% +8.2826% +2.1141%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17617 17924 +907 +746 +1011 +1179 +307 +5.3300% +4.3428% +5.9777% +7.0409% +1.7426%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 4941 5129 +1482 +1216 +1265 +1590 +188 +40.6361% +31.0759% +32.7381% +44.9279% +3.8049%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5427 5597 +1297 +994 +800 +620 +170 +30.1628% +21.5946% +16.6771% +12.4573% +3.1325%
SCP_Astral_250pg_3ms 576 22 936 741 2680 2868 +2292 +2846 +1932 +2127 +188 +397.9167% +12936.3636% +206.4103% +287.0445% +7.0149%
SCP_Astral_250pg_6ms 637 2080 2029 2046 3771 4147 +3510 +2067 +2118 +2101 +376 +551.0204% +99.3750% +104.3864% +102.6882% +9.9708%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7435 7517 +1272 +1171 +1501 +1390 +82 +20.3683% +18.4526% +24.9501% +22.6865% +1.1029%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7593 7867 +1145 +1138 +855 +844 +274 +17.0336% +16.9119% +12.1934% +12.0177% +3.6086%
SCP_Astral_500pg_3ms 982 2365 2177 4719 5041 +4059 +2676 +2864 +322 +413.3401% +113.1501% +131.5572% +6.8235%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 6659 6717 +3009 +2710 +2672 +2799 +58 +81.1489% +67.6316% +66.0569% +71.4395% +0.8710%
SCP_Astral_MBR 20165 20129 20074 19793 20378 20296 +131 +167 +222 +503 -82 +0.6496% +0.8296% +1.1059% +2.5413% -0.4024%
Seer_Astral_45 225377 241455 241952 237727 233526
Seer_Astral_single 4685 4700 4632 4849 5027 +342 +327 +395 +178 +7.2999% +6.9574% +8.5276% +3.6709%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1339502
EWZ_2P_MBR_Exploris 245259 244802 246648 +1389 +1846 +0.5663% +0.7541%
EWZ_2P_MBR_Exploris_Human 115447 114079 115459 +12 +1380 +0.0104% +1.2097%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130613 131625 +2657 +1012 +2.0602% +0.7748%
MacCoss_Eclipse_Normalization_noNorm 178174 187043 186974 +8800 -69 +4.9390% -0.0369%
MacCoss_Eclipse_Normalization_yesNorm 178174 187043 186974 +8800 -69 +4.9390% -0.0369%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6583
KEAP1KO_Eclipse 7845 8175 8155 8203 8224 8381 +536 +206 +226 +178 +157 +6.8324% +2.5199% +2.7713% +2.1699% +1.9090%
MTAC_3P_Alternating 11361 11494 11351 11338 11831 12012 +651 +518 +661 +674 +181 +5.7301% +4.5067% +5.8233% +5.9446% +1.5299%
MTAC_3P_Standard 11473 11560 11477 11396 12025 12053 +580 +493 +576 +657 +28 +5.0553% +4.2647% +5.0187% +5.7652% +0.2328%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4354 4384 +256 +292 +284 +30 +6.2016% +7.1359% +6.9268% +0.6890%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4404 4446 +231 +198 +228 +232 +42 +5.4804% +4.6610% +5.4054% +5.5055% +0.9537%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4321 4347 +272 +213 +257 +250 +26 +6.6748% +5.1524% +6.2836% +6.1020% +0.6017%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4397 4474 +225 +237 +230 +243 +77 +5.2954% +5.5936% +5.4194% +5.7433% +1.7512%
Olsen_Astral_3P 13820 14378 14293 14296 14381
Olsen_Exploris_3P 7255 7582 7340 7479 7744 7919 +664 +337 +579 +440 +175 +9.1523% +4.4447% +7.8883% +5.8831% +2.2598%
SCIEX_3P 8652 9109 8679 8618 9355
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3916 4050 +805 +661 +639 +732 +134 +24.8074% +19.5043% +18.7335% +22.0615% +3.4219%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3764 3952 +698 +519 +661 +518 +188 +21.4505% +15.1180% +20.0851% +15.0844% +4.9947%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3262 3279 +829 +883 +829 +882 +17 +33.8367% +36.8531% +33.8367% +36.7960% +0.5212%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3259 3347 +839 +911 +713 +705 +88 +33.4530% +37.3974% +27.0691% +26.6843% +2.7002%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5846 5980 +401 +324 +476 +434 +134 +7.1877% +5.7284% +8.6483% +7.8255% +2.2922%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5069 5171 +450 +333 +388 +360 +102 +9.5319% +6.8830% +8.1121% +7.4829% +2.0122%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5893 6076 +465 +421 +480 +523 +183 +8.2873% +7.4447% +8.5776% +9.4183% +3.1054%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6105 6250 +404 +301 +407 +445 +145 +6.9107% +5.0597% +6.9656% +7.6658% +2.3751%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1855 1932 +640 +508 +526 +644 +77 +49.5356% +35.6742% +37.4111% +50% +4.1509%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1982 2027 +459 +367 +269 +154 +45 +29.2730% +22.1084% +15.3015% +8.2221% +2.2704%
SCP_Astral_250pg_3ms 307 8 350 283 1112 1201 +894 +1193 +851 +918 +89 +291.2052% +14912.5000% +243.1429% +324.3816% +8.0036%
SCP_Astral_250pg_6ms 637 756 751 766 1449 1610 +973 +854 +859 +844 +161 +152.7473% +112.9630% +114.3808% +110.1828% +11.1111%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2723 2748 +541 +473 +579 +518 +25 +24.5129% +20.7912% +26.6943% +23.2287% +0.9181%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2749 2849 +446 +461 +372 +310 +100 +18.5601% +19.3049% +15.0182% +12.2095% +3.6377%
SCP_Astral_500pg_3ms 525 902 828 1832 1953 +1428 +1051 +1125 +121 +272% +116.5188% +135.8696% +6.6048%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2446 2483 +1165 +1036 +997 +1048 +37 +88.3915% +71.5964% +67.0929% +73.0314% +1.5127%
SCP_Astral_MBR 4708 4720 4712 4715 4934 4935 +227 +215 +223 +220 +1 +4.8216% +4.5551% +4.7326% +4.6660% +0.0203%
Seer_Astral_45 5802 6297 6122 6133 6123
Seer_Astral_single 4685 4700 4632 4849 5027 +342 +327 +395 +178 +7.2999% +6.9574% +8.5276% +3.6709%
YEAST_KO_Astral 4565 4795 4676 4673 4730
EWZ_2P_MBR_Exploris 7041 7029 7201 +160 +172 +2.2724% +2.4470%
EWZ_2P_MBR_Exploris_Human 6167 6076 6265 +98 +189 +1.5891% +3.1106%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6956 7124 +237 +168 +3.4413% +2.4152%
MacCoss_Eclipse_Normalization_noNorm 5804 6128 6238 +434 +110 +7.4776% +1.7950%
MacCoss_Eclipse_Normalization_yesNorm 5804 6128 6238 +434 +110 +7.4776% +1.7950%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 630467
KEAP1KO_Eclipse 89599 90201 +602
MTAC_3P_Alternating 65077 65185 +108
MTAC_3P_Standard 65657 65586 -71
MTAC_Yeast_Alternating_3min 12558 12532 -26
MTAC_Yeast_Alternating_5min 12789 12815 +26
MTAC_Yeast_Standard_3min 12476 12504 +28
MTAC_Yeast_Standard_5min 12851 12943 +92
Olsen_Astral_3P 237315
Olsen_Exploris_3P 155392 156722 +1330
SCIEX_3P 73165
SCP_Astral_1000pg_12ms 10883 11262 +379
SCP_Astral_1000pg_24ms 10595 11070 +475
SCP_Astral_1000pg_3ms 8821 8795 -26
SCP_Astral_1000pg_6ms 6125 6288 +163
SCP_Astral_10ng_12ms 16852 17161 +309
SCP_Astral_10ng_24ms 14483 14577 +94
SCP_Astral_10ng_3ms 16884 17237 +353
SCP_Astral_10ng_6ms 17617 17922 +305
SCP_Astral_250pg_12ms 4939 5129 +190
SCP_Astral_250pg_24ms 5427 5595 +168
SCP_Astral_250pg_3ms 2680 2868 +188
SCP_Astral_250pg_6ms 3771 4147 +376
SCP_Astral_500pg_12ms 7435 7517 +82
SCP_Astral_500pg_24ms 7593 7866 +273
SCP_Astral_500pg_3ms 4719 5039 +320
SCP_Astral_500pg_6ms 6659 6715 +56
SCP_Astral_MBR 20378 20296 -82
Seer_Astral_45 233525
Seer_Astral_single 4849 5027 +178
YEAST_KO_Astral 1339497
EWZ_2P_MBR_Exploris 244790 246622 +1832
EWZ_2P_MBR_Exploris_Human 114069 115452 +1383
EWZ_2P_MBR_Exploris_YeastHuman 130608 131619 +1011
MacCoss_Eclipse_Normalization_noNorm 187042 186972 -70
MacCoss_Eclipse_Normalization_yesNorm 187042 186972 -70

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0015 -0.0007 +0.0005 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0008 -0.0003 +0.0004 +0.0005
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0013 -0.0009 -0.0004 -0.0008 +0.0001 -0.0001 +0.0004
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0016 -0.0007 +0.0007 -0.0011 -0.0001 +0.0001 +0.0010
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0019 -0.0016 -0.0001 +0.0003 +0.0010 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0010 -0.0017 -0.0013 -0.0004 -0.0003 -0.0002 -0.0007
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0022 -0.0003 -0.0009 -0.0010 -0.0002 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0011 -0.0006 +0.0004 +0.0013 +0.0018 +0.0005
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0008 -0.0005 -0.0011 +0.0003
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0004 0.0017 +0.0019 +0.0014 +0.0028 +0.0012 +0.0013
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0031 -0.0020 +0.0003 +0.0010 +0.0011
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0000 0.0023 +0.0077 +0.0056 +0.0055 +0.0069 +0.0023
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0017 0.0014 +0.0044 +0.0062 +0.0044 +0.0053 -0.0003
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0021 0.0001 +0.0003 +0.0012 +0.0037 +0.0027 +0.0022
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0016 -0.0004 +0.0018 +0.0012 +0.0020 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0019 0.0003 +0.0024 -0.0006 +0.0018 +0.0016 +0.0022
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0010 -0.0003 +0.0022 +0.0024 +0.0016 +0.0015 +0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0011 0.0006 +0.0014 +0.0005 +0.0027 +0.0018 +0.0017
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0015 0.0018 +0.0057 +0.0059 +0.0016 +0.0071 +0.0003
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0021 0.0012 +0.0014 +0.0024 +0.0036 +0.0043 +0.0034
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 -0.0011 0.0028 +0.0097 +0.0028 +0.0039
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0019 0.0019 +0.0070 +0.0046 +0.0069 +0.0038
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0032 0.0007 +0.0028 +0.0016 +0.0034 +0.0033 +0.0038
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0017 0.0015 +0.0028 +0.0039 +0.0027 +0.0026 -0.0002
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0011 0.0025 +0.0038 +0.0047 +0.0060 +0.0014
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0004 0.0018 +0.0049 +0.0050 +0.0033 +0.0013
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 -0.0009 +0.0017 +0.0010 +0.0005 +0.0013 -0.0000
Seer_Astral_45_Entrapment -0.0023 -0.0008
Seer_Astral_single_Entrapment -0.0022 -0.0001 0.0012 +0.0034 +0.0013
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0024
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0015 -0.0003 +0.0023 +0.0012
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0046 -0.0038 -0.0009 +0.0008
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0037 -0.0040 -0.0030 -0.0029 -0.0045 -0.0047 -0.0002
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0044 -0.0034 -0.0021 -0.0009 -0.0005 -0.0008 +0.0010
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0035 +0.0030 +0.0017 +0.0013 -0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 0.0007 -0.0002 +0.0039 +0.0036 +0.0046 +0.0031 -0.0009
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0052 -0.0026 +0.0032 +0.0021 -0.0006 +0.0002 +0.0027
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0009 -0.0036 -0.0000 +0.0009 +0.0019 -0.0027
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0042 -0.0042 -0.0039 +0.0000
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0031
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0025 +0.0004 -0.0023 +0.0004 -0.0016 -0.0008
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0041
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0032 0.0003 +0.0052 +0.0045 +0.0045 +0.0035
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 0.0033 -0.0031 +0.0039 +0.0027 +0.0039 +0.0039 -0.0064
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0004 -0.0002 +0.0057 +0.0056 +0.0069 +0.0069 -0.0007
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0025 -0.0003 +0.0014 +0.0046 +0.0040 +0.0042 +0.0021
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0066 -0.0056 -0.0002 -0.0017 -0.0003 +0.0010
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0032 -0.0035 -0.0003 -0.0012 -0.0019 +0.0010 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0021 -0.0007 +0.0030 +0.0066 +0.0059 +0.0054 +0.0014
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0018 +0.0036 +0.0002 +0.0036 +0.0028 +0.0018
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0041 -0.0022 +0.0031 +0.0055 +0.0012 +0.0042 -0.0062
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0024 0.0034 +0.0075 +0.0076 +0.0060 +0.0047 +0.0058
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0053 0.0065 +0.0093 +0.0065 +0.0151 +0.0065 +0.0012
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0000 0.0127 +0.0226 +0.0194 +0.0211 +0.0215 +0.0127
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0017 0.0008 +0.0044 +0.0048 -0.0006 +0.0029 -0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0013 -0.0017 +0.0003 -0.0016 +0.0034 +0.0045 -0.0004
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0031 0.0060 +0.0102 -0.0010 +0.0040 +0.0061 +0.0029
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0000 0.0014 +0.0058 +0.0059 +0.0021 +0.0069 +0.0014
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0028 -0.0019 +0.0040 +0.0011 +0.0006 +0.0031 +0.0009
Seer_Astral_45_Entrapment -0.0049 -0.0047
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0031 +0.0105 +0.0031
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0004
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0009 0.0001 +0.0013 +0.0010
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0006 -0.0003 -0.0000 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0007 -0.0005 -0.0003 -0.0007 -0.0003 -0.0004 +0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0004 +0.0005 -0.0006 -0.0000 -0.0001 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0013 -0.0009 +0.0001 +0.0004 +0.0005 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0010 -0.0006 -0.0002 +0.0000 -0.0001 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0014 -0.0016 -0.0008 -0.0009 -0.0008 -0.0006 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0009 -0.0001 +0.0007 +0.0009 +0.0013 +0.0007
MacCoss_Eclipse_Normalization_Entrapment 0.0002 -0.0001 0.0000 -0.0002 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0006
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0003 0.0014 +0.0018 +0.0009 +0.0020 +0.0014 +0.0010
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0022 -0.0016 -0.0000 +0.0014 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0003 0.0012 +0.0057 +0.0040 +0.0042 +0.0049 +0.0014
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 0.0017 0.0009 +0.0029 +0.0039 +0.0035 +0.0035 -0.0008
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0013 0.0003 +0.0001 +0.0008 +0.0030 +0.0027 +0.0015
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0012 -0.0004 +0.0013 +0.0006 +0.0012 +0.0008
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0013 0.0001 +0.0015 -0.0002 +0.0013 +0.0009 +0.0014
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0008 -0.0001 +0.0019 +0.0020 +0.0015 +0.0014 +0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0012 -0.0000 +0.0005 -0.0002 +0.0012 +0.0008 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0020 0.0008 +0.0038 +0.0035 +0.0011 +0.0040 -0.0012
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0012 0.0007 +0.0014 +0.0016 +0.0021 +0.0021 +0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0006 0.0021 +0.0080 +0.0021 +0.0014
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0000 0.0036 +0.0072 +0.0057 +0.0066 +0.0036
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0010 0.0016 +0.0035 +0.0020 +0.0036 +0.0030 +0.0027
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0014 0.0020 +0.0036 +0.0037 +0.0038 +0.0036 +0.0005
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0007 0.0033 +0.0015 +0.0037 +0.0049 +0.0027
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0011 0.0014 +0.0039 +0.0033 +0.0024 +0.0003
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0003 -0.0001 +0.0016 +0.0013 +0.0006 +0.0011 +0.0002
Seer_Astral_45_Entrapment -0.0011 -0.0003
Seer_Astral_single_Entrapment -0.0022 -0.0001 0.0012 +0.0034 +0.0013
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0016
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0002 0.0004 +0.0015 +0.0006
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0026 -0.0021 -0.0004 +0.0005
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0019 -0.0019 -0.0018 -0.0017 -0.0022 -0.0022 -0.0000
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0019 -0.0015 -0.0007 -0.0001 +0.0006 +0.0003 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0003 -0.0009 +0.0027 +0.0025 +0.0021 -0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 0.0005 -0.0003 +0.0034 +0.0018 +0.0022 +0.0010 -0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0028 -0.0014 +0.0024 +0.0021 -0.0000 +0.0002 +0.0014
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0014 -0.0021 +0.0002 +0.0006 +0.0016 -0.0007
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0021 -0.0016 +0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0018
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0015 -0.0020 +0.0006 -0.0026 -0.0003 -0.0004 -0.0005
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0023
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0021 0.0009 +0.0046 +0.0032 +0.0042 +0.0030
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 0.0013 -0.0018 +0.0031 +0.0038 +0.0040 +0.0026 -0.0030
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0010 0.0003 +0.0046 +0.0035 +0.0043 +0.0033 -0.0008
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0022 -0.0004 +0.0021 +0.0031 +0.0036 +0.0036 +0.0019
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0043 +0.0004 -0.0012 -0.0002 +0.0006
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0031 -0.0026 +0.0006 -0.0012 -0.0011 -0.0000 +0.0005
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0023 -0.0009 +0.0012 +0.0037 +0.0029 +0.0024 +0.0014
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0020 +0.0019 -0.0001 +0.0018 +0.0009 +0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0039 0.0015 +0.0054 +0.0056 +0.0034 +0.0045 -0.0024
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0018 0.0027 +0.0040 +0.0059 +0.0030 +0.0027 +0.0045
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0014 0.0043 +0.0103 +0.0125 +0.0090 +0.0043 +0.0029
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0016 0.0100 +0.0200 +0.0168 +0.0155 +0.0147 +0.0115
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0023 0.0000 +0.0040 +0.0036 +0.0008 +0.0028 -0.0022
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0013 -0.0006 +0.0013 -0.0007 +0.0037 +0.0039 +0.0007
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0021 0.0038 +0.0070 -0.0029 +0.0009 +0.0034 +0.0016
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0007 0.0015 +0.0035 +0.0037 +0.0006 +0.0043 +0.0022
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0027 -0.0003 +0.0020 +0.0014 +0.0019 +0.0025 +0.0024
Seer_Astral_45_Entrapment -0.0029 -0.0010
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0032 +0.0107 +0.0032
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 2195 4382 -20013 +2187

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -19 127 -644 +146

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0290 -0.0026 +0.0290

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 110 -436 -1280 -546

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -8 -55 -245 -47

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 14 13 +4 +1 +1 -1 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 11 +4 +0 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 12 13 +3 +0 +1 -2 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 0 2 +0 +1 +0 -2 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 0 1 +0 +1 +0 -2 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 3 +0 +1 +0 -1 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 1 +0 +1 -1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1634 0.1643 +0.0184 +0.0222 +0.0243 +0.0269 +0.0009
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1552 0.1553 +0.0160 +0.0191 +0.0202 +0.0229 +0.0001
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1576 0.1606 +0.0151 +0.0182 +0.0199 +0.0031
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1474 0.1492 -0.0038 +0.0083 +0.0116 +0.0136 +0.0019
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1685 0.1697 -0.0001 +0.0057 +0.0081 +0.0097 +0.0011
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1445 0.1455 -0.0048 +0.0089 +0.0118 +0.0132 +0.0009
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1530 +0.0050 +0.0031 +0.0035 +0.0025 -0.0001
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1536
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5931 0.5938 +0.0069 +0.0007
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2012 0.2051 +0.0335 +0.0039

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0841 0.0841 +0.0078 +0.0102 +0.0114 +0.0121 +0.0000
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0803 0.0803 +0.0080 +0.0100 +0.0104 +0.0115 +0.0000
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0737 0.0744 +0.0072 +0.0084 +0.0086 +0.0008
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0649 0.0640 -0.0138 +0.0037 +0.0047 +0.0051 -0.0010
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0787 0.0801 +0.0009 +0.0045 +0.0048 +0.0029 +0.0014
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0632 0.0633 -0.0138 +0.0065 +0.0064 +0.0064 +0.0001
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0470
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0987 0.0985 -0.0044 -0.0035 -0.0052 -0.0042 -0.0002
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1012
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5808 0.5809 -0.0073 +0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1362 0.1374 +0.0141 +0.0013

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0035 0.0008 -0.0020 +0.0070 +0.0012 -0.0742 -0.0027
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0146 -0.0137 -0.0076 +0.0055 -0.0002 -0.0262 -0.0009
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0075 -0.0091 +0.0007 -0.0023 -0.0001 +0.0066 +0.0016
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0726 -0.0756 +0.0012 -0.0008 +0.0020 -0.0543 +0.0030
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0707 -0.0719 -0.0054 -0.0006 -0.0003 -0.0015 +0.0012
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0577 -0.0574 -0.0080 +0.0050 -0.0016 +0.0286 -0.0002
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0481 +0.0114 +0.0329 -0.0052 -0.0480
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1834 +0.0115 +0.0151 +0.0011 -0.0457
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1791 -0.0082 +0.0282 -0.0195 +0.1593
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0329 +0.0067 +0.0305 +0.0014 -0.0093
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3275 +0.0081 +0.0093 -0.0002 -0.0154
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1236 -0.0024 -0.0402 -0.0016 +0.0901
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1225 +0.0108 -0.0145 +0.0012 +0.0495
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2185 +0.0015 +0.0038 -0.0038 -0.0093
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2388 +0.0262 -0.0191 +0.0011 +0.0365
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1347 0.1339 -0.0059 -0.0059 +0.0211 -0.1017 -0.0009
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0842 -0.0845 +0.0062 +0.0047 -0.0191 +0.0237 +0.0002
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2015 0.2018 +0.0183 -0.0240 +0.0287 -0.0770 +0.0003
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1038 0.1046 +0.0048 -0.0054 -0.0067 +0.0156 +0.0008
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0481 +0.0009 +0.0001 -0.0089 +0.0026 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2149 0.2153 +0.0051 -0.0017 +0.0004 +0.0113 +0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1482 0.1485 -0.0032 -0.0062 -0.0160 +0.1258 +0.0002
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0795 -0.0783 +0.0043 -0.0045 -0.0054 -0.0225 -0.0012
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0442 0.0510 +0.0169 -0.0238 +0.0355 -0.0523 +0.0068
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0335 +0.0195 +0.0041 +0.0006 -0.0438
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 0.0007 -0.0031 +0.0125 +0.0006 -0.0674
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0303 -0.0051 -0.0071 +0.0012 +0.0267
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0765 +0.0119 -0.0026 -0.0002 +0.0340
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0248
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0149 -0.0331 +0.0073 +0.0004 -0.0081
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0564
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1523 -0.0356 -0.0145 +0.0024 +0.0936
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1005 -0.0468 -0.0064 -0.0010 +0.0637

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0080 -0.0027 +0.0009 +0.0076 -0.0005 -0.0653 -0.0053
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0148 -0.0148 -0.0089 +0.0045 +0.0004 -0.0263 +0.0000
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0007 -0.0011 +0.0054 -0.0044 +0.0010 -0.0029 +0.0004
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0693 -0.0768 +0.0013 +0.0005 -0.0055 -0.0513 +0.0075
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0694 -0.0692 -0.0060 -0.0005 -0.0005 -0.0007 -0.0002
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0546 -0.0514 -0.0084 +0.0078 -0.0007 +0.0236 -0.0033
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0517 +0.0142 +0.0365 -0.0057 -0.0387
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1335 +0.0050 +0.0043 -0.0072 -0.0299
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1920 -0.0338 -0.0246 +0.0154 +0.1748
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0269 +0.0064 +0.0290 +0.0021 -0.0255
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3006 +0.0072 +0.0066 -0.0010 -0.0050
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1154 +0.0002 -0.0402 -0.0012 +0.0866
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1070 +0.0124 -0.0135 -0.0021 +0.0560
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1976 -0.0003 +0.0009 -0.0042 +0.0019
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2026 +0.0289 -0.0188 +0.0012 +0.0223
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1578 0.1529 -0.0077 -0.0028 +0.0144 -0.0633 -0.0049
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0767 -0.0803 +0.0048 +0.0016 -0.0170 +0.0210 +0.0036
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2340 0.2292 +0.0504 -0.0481 +0.0073 -0.0314 -0.0048
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.1002 0.0986 +0.0031 -0.0032 -0.0081 +0.0243 -0.0016
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0438 -0.0450 +0.0011 -0.0008 -0.0084 +0.0017 +0.0012
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2253 0.2256 +0.0036 -0.0008 +0.0016 +0.0220 +0.0003
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1313 0.1280 +0.0005 -0.0096 -0.0297 +0.1267 -0.0033
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0800 -0.0746 +0.0056 -0.0034 -0.0033 -0.0285 -0.0054
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0598 0.0671 +0.0405 -0.0089 +0.0322 -0.0574 +0.0073
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0499 +0.0258 +0.0029 -0.0003 -0.0201
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0205 -0.0049 +0.0142 +0.0054 -0.0473
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0264 -0.0001 -0.0108 +0.0000 +0.0223
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0819 +0.0137 -0.0048 +0.0001 +0.0412
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0977 -0.0232 +0.0027 +0.0012 +0.0352
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0176 -0.0350 +0.0076 +0.0002 -0.0041
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0664 +0.0131 -0.0109 +0.0003 +0.0548
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1598 -0.0435 -0.0160 +0.0023 +0.1020
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0931 -0.0508 -0.0078 +0.0009 +0.0488

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1258 0.1248 +0.0343 +0.0202 -0.0086 -0.1820 -0.0010
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1101 0.1123 +0.0169 -0.0058 +0.0004 -0.0998 +0.0022
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1125 0.1158 +0.0117 -0.0078 +0.0011 -0.1483 +0.0033
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1308 0.1417 +0.0441 -0.0007 -0.0136 -0.1672 +0.0109
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1234 0.1270 +0.0164 -0.0031 -0.0002 -0.0959 +0.0037
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1269 0.1294 +0.0170 -0.0063 +0.0017 -0.1411 +0.0025
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1721 +0.0354 +0.0384 -0.0420 -0.4036
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2153 +0.0422 -0.0321 -0.0167 -0.1348
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3083 +0.2175 -0.0279 -0.1166 -0.9328
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1373 +0.0427 +0.0074 -0.0036 -0.1191
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2297 +0.0473 +0.0030 -0.0078 -0.1059
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1773 +0.0549 +0.0262 -0.0056 -0.2028
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1390 +0.0358 +0.0129 -0.0110 -0.1925
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1927 +0.0274 +0.0045 -0.0018 -0.0927
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1932 +0.0778 +0.0001 -0.0169 -0.3452
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.2070 0.1908 +0.0445 +0.0761 -0.1281 -0.3638 -0.0162
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0477 0.0487 -0.0103 +0.0134 -0.0147 -0.1035 +0.0010
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2703 0.3025 -0.0030 +0.1483 +0.0078 -0.6872 +0.0322
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1850 0.1850 +0.0037 +0.0045 +0.0051 -0.1654 -0.0001
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0420 0.0431 +0.0676 -0.0087 -0.0168 -0.1098 +0.0011
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1833 0.1850 +0.0316 +0.0062 -0.0049 -0.1521 +0.0018
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2082 0.2158 -0.0093 +0.0378 -0.0706 -0.3686 +0.0076
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0563 0.0598 +0.0977 -0.0155 +0.0159 -0.1915 +0.0034
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3837 0.3976 +0.0737 +0.1982 -0.0827 -0.8914 +0.0138
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1070 +0.0321 -0.0450 -0.0051 -0.3757
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1330 +0.0200 -0.0293 -0.0344 -0.4089
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0731 +0.0068 -0.0387 -0.0080 -0.0336
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0861 +0.0190 -0.0584 -0.0028 -0.0659
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0956 +0.0281 -0.0478 -0.0031 -0.0987
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0875 +0.0273 -0.0601 -0.0037 -0.0465
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0890 +0.0130 -0.0614 -0.0008 -0.0959
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1480 +0.0619 -0.0455 -0.0143 -0.4260
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1024 +0.0688 -0.0494 -0.0103 -0.3948

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0673 0.0538 +0.0149 -0.0182 -0.0054 -0.0534 -0.0135
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0360 0.0332 +0.0035 +0.0005 +0.0043 -0.0455 -0.0028
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0437 0.0407 -0.0157 -0.0104 +0.0083 -0.0685 -0.0030
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0471 0.0448 -0.0042 +0.0002 -0.0084 -0.0725 -0.0023
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0368 0.0381 +0.0032 -0.0030 +0.0035 -0.0348 +0.0013
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0486 0.0497 +0.0000 +0.0073 -0.0081 -0.0769 +0.0012
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0796 +0.0402 -0.0136 +0.0467 -0.1860
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0780 +0.0316 -0.0208 -0.0112 -0.0306
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1184 +0.1306 -0.0136 -0.0647 -0.2744
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0243 +0.0032 +0.0034 -0.0021 -0.0222
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0441 +0.0110 -0.0047 +0.0013 -0.0184
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0244 +0.0055 -0.0000 +0.0038 -0.0376
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0277 +0.0026 +0.0079 -0.0036 -0.0354
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0098
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0353 +0.0296 -0.0022 -0.0025 -0.0855
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0517 0.0486 +0.0146 +0.0452 -0.0355 -0.1759 -0.0031
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0188 0.0170 -0.0057 -0.0062 -0.0031 -0.0297 -0.0019
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0643 0.1309 -0.1294 +0.1626 +0.0090 -0.4363 +0.0667
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0327 0.0333 -0.0046 +0.0074 +0.0016 -0.0363 +0.0005
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0095 0.0093 +0.0109 -0.0066 +0.0090 -0.0338 -0.0002
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0368 0.0355 -0.0053 +0.0093 +0.0025 -0.0455 -0.0013
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0636 0.0658 -0.0166 +0.0170 -0.0166 -0.1538 +0.0022
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0207 0.0196 +0.0068 -0.0006 -0.0039 -0.0531 -0.0010
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1671 0.1293 -0.0891 -0.0032 -0.0082 -0.2633 -0.0378
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0496 +0.0682 -0.0593 -0.0056 -0.1728
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0620 +0.0668 -0.0849 -0.0031 -0.1815
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0330 +0.0113 -0.0357 +0.0198 -0.0198
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0246 -0.0054 -0.0154 +0.0040 -0.0242
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0269 -0.0011 -0.0225 +0.0112 -0.0339
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0236 +0.0094 -0.0181 -0.0013 -0.0221
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0373 -0.0134 -0.0199 -0.0090 -0.0302
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0432 +0.0271 -0.0671 +0.0055 -0.2161
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0427 +0.0501 -0.0498 +0.0220 -0.2327

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 119.5600
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 16.0500 13.3900 -10.6800 -3.9300 -6.4800 -3.7400 -2.6600 -44.3706% -22.6905% -32.6120% -21.8330% -16.5732%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.6100 7.4900 -5.2600 -1.5800 -0.8700 -1.8000 -1.1200 -41.2549% -17.4201% -10.4067% -19.3757% -13.0081%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.7400 7.2900 -5.0200 -1.6700 -2.3700 -3.5200 -0.4500 -40.7799% -18.6384% -24.5342% -32.5624% -5.8140%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.1100 4.5300 +0.3000 +0.1200 -0.4100 +0.4200 +7.0922% +2.7211% -8.2996% +10.2190%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.2700 4.7700 -0.6100 +0.3900 +0.0200 +0.2300 +0.5000 -11.3383% +8.9041% +0.4211% +5.0661% +11.7096%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.1000 4.2400 -1.1900 +0.1000 -0.2000 -0.4200 +0.1400 -21.9153% +2.4155% -4.5045% -9.0129% +3.4146%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5600 4.3900 -1.1600 -0.0300 -0.1400 -0.0700 -0.1700 -20.9009% -0.6787% -3.0905% -1.5695% -3.7281%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 21.8200
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 14.0700 13.1500 -14.5100 -6.6100 -5.1700 -6.1300 -0.9200 -52.4584% -33.4514% -28.2205% -31.7946% -6.5387%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 10.2600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3400 4.6900 -1.1000 +0.1000 +0.0400 +0.6000 +0.3500 -18.9983% +2.1786% +0.8602% +14.6699% +8.0645%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 4.6300 4.7300 -1.5300 +0.3300 -1.1500 +0.1000 -24.4409% +7.5000% -19.5578% +2.1598%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.4000 4.5900 +0.0700 +0.8600 -0.2100 +0.9500 +0.1900 +1.5487% +23.0563% -4.3750% +26.0989% +4.3182%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.1600 4.2300 -1.5100 +0.7200 +0.3100 +0.7900 +0.0700 -26.3066% +20.5128% +7.9082% +22.9651% +1.6827%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4300 5.7200 -1.3500 +0.1900 +0.2100 -0.0200 +0.2900 -19.0948% +3.4358% +3.8113% -0.3484% +5.3407%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.5500 5.5000 -2.0900 -0.2300 -0.6400 -0.0400 -0.0500 -27.5362% -4.0140% -10.4235% -0.7220% -0.9009%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2300 5.1400 -1.3100 +0.4700 +0.8400 +0.7300 -0.0900 -20.3101% +10.0642% +19.5349% +16.5533% -1.7208%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.8800 5.0600 -2.3200 +0.1300 +0.4300 -0.5600 +0.1800 -31.4363% +2.6369% +9.2873% -9.9644% +3.6885%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.3600 4.3100 -0.4300 +0.6500 +0.9200 -0.0500 -9.0717% +17.7596% +27.1386% -1.1468%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.3300 4.3600 -0.9000 +0.5200 +0.6000 +0.0300 -17.1103% +13.5417% +15.9574% +0.6928%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 4 3.8800 -0.7700 +0.4500 +0.1700 +0.4300 -0.1200 -16.5591% +13.1195% +4.5822% +12.4638% -3.0000%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.4700 4.6100 +0.4400 +1.3200 +0.9200 +1.3400 +0.1400 +10.5516% +40.1216% +24.9322% +40.9786% +3.1320%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2000 4.4300 -0.8500 +0.9000 +0.8300 +0.9400 +0.2300 -16.0985% +25.4958% +23.0556% +26.9341% +5.4762%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.2900 4.5300 -0.9800 +0.7100 +0.3800 -0.2800 +0.2400 -17.7858% +18.5864% +9.1566% -5.8212% +5.5944%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.4000 4.3700 -0.3600 +0.9100 +0.8000 -0.0300 -7.6110% +26.3006% +22.4090% -0.6818%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.7000 4.9800 +0.3300 +1.3600 +1.2500 +1.2000 +0.2800 +7.0968% +37.5691% +33.5121% +31.7460% +5.9574%
SCP_Astral_MBR 9.0400 6.5500 6.1000 6.7300 6.9200 -2.1200 +0.3700 +0.8200 +0.1900 -23.4513% +5.6489% +13.4426% +2.8232%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 85.2100
Seer_Astral_single 4.4700 4.1400 5.5800 5.2300 4.5000 +0.0300 +0.3600 -1.0800 -0.7300 +0.6711% +8.6957% -19.3548% -13.9579%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 114.6600
EWZ_2P_MBR_Exploris 26.1800 20.0200 21.4700 -4.7100 +1.4500 -17.9908% +7.2428%
EWZ_2P_MBR_Exploris_Human 12.9100 11.2900 10.8800 -2.0300 -0.4100 -15.7242% -3.6315%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 12.3500 11.4700 -0.5900 -0.8800 -4.8922% -7.1255%
MacCoss_Eclipse_Normalization_noNorm 27.5100 26.9000 28.7800 +1.2700 +1.8800 +4.6165% +6.9888%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 27.3700 29.1100 +1.4400 +1.7400 +5.2042% +6.3573%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png