Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541
MTAC_3P_Alternating 586322 615762 610710 599881 599881 619230 +32908 +3468 +8520 +19349 +19349 +5.6126% +0.5632% +1.3951% +3.2255% +3.2255%
MTAC_3P_Standard 596590 623022 617574 607435 607435 624746 +28156 +1724 +7172 +17311 +17311 +4.7195% +0.2767% +1.1613% +2.8499% +2.8499%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 144029 +6481 +7190 +8469 +8469 +4.7118% +5.2544% +6.2474% +6.2474%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 163933 +8292 +7382 +7424 +8898 +9089 +5.3276% +4.7154% +4.7435% +5.7393% +5.8698%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 145151 +6642 +5766 +5859 +7266 +7364 +4.7954% +4.1367% +4.2063% +5.2696% +5.3445%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 166690 +7728 +7958 +7530 +8768 +8768 +4.8615% +5.0135% +4.7311% +5.5521% +5.5521%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 51138 +10256 +9438 +8713 +9038 +9038 +25.0868% +22.6331% +20.5374% +21.4679% +21.4679%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 48723 +7654 +6321 +6700 +7571 +7571 +18.6369% +14.9073% +15.9436% +18.3976% +18.3976%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 39309 +30569 +16194 +16294 +16396 +16396 +349.7597% +70.0584% +70.7973% +71.5576% +71.5576%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 28384 +11449 +10831 +9975 +10036 +10036 +67.6056% +61.7046% +54.1855% +54.6981% +54.6981%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 112438 +12530 +9547 +13455 +13790 +13790 +12.5415% +9.2788% +13.5932% +13.9790% +13.9790%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 79829 +8731 +7101 +8384 +8703 +8703 +12.2802% +9.7638% +11.7349% +12.2360% +12.2360%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 122782 +17078 +16285 +17160 +18348 +18270 +16.1564% +15.2915% +16.2466% +17.5690% +17.4812%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 127492 +12335 +10176 +13170 +14411 +14242 +10.7115% +8.6740% +11.5201% +12.7440% +12.5757%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 18544 +8350 +7738 +7306 +7311 +7311 +81.9109% +71.6084% +65.0116% +65.0850% +65.0850%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 19593 +4786 +4160 +3552 +3894 +3894 +32.3226% +26.9552% +22.1433% +24.8041% +24.8041%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 7539 +6278 +5507 +5089 +5153 +5153 +497.8588% +271.0138% +207.7143% +215.9681% +215.9681%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 13706 +12270 +8923 +8016 +7975 +7975 +854.4568% +186.5566% +140.8787% +139.1555% +139.1555%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 31373 +9663 +9478 +8793 +8910 +8910 +44.5094% +43.2884% +38.9415% +39.6652% +39.6652%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 30989 +5129 +4846 +4729 +5364 +5364 +19.8337% +18.5365% +18.0084% +20.9327% +20.9327%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 17060 +13576 +10162 +10226 +10226 +389.6670% +147.3181% +149.6342% +149.6342%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 26406 +15707 +14932 +13524 +13517 +13517 +146.8081% +130.1377% +104.9837% +104.8724% +104.8724%
SCP_Astral_MBR 92167 93585 91884 90864 90838 103419 +11252 +9834 +11535 +12555 +12581 +12.2083% +10.5081% +12.5539% +13.8174% +13.8499%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61042 +4343 +5249 +5151 +5151 +7.6597% +9.4080% +9.2162% +9.2162%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346
EWZ_2P_MBR_Exploris_Human 836809 836809
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031
MTAC_3P_Alternating 108267 117352 114659 114816 114816 122902 +14635 +5550 +8243 +8086 +8086 +13.5175% +4.7294% +7.1891% +7.0426% +7.0426%
MTAC_3P_Standard 110265 118693 115800 116148 116148 123743 +13478 +5050 +7943 +7595 +7595 +12.2233% +4.2547% +6.8592% +6.5391% +6.5391%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 54401 +5543 +5369 +5406 +5406 +11.3451% +10.9500% +11.0338% +11.0338%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 61492 +7523 +6417 +5652 +5608 +5671 +13.9395% +11.6514% +10.1218% +10.0351% +10.1593%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 55022 +6401 +5357 +4733 +4562 +4607 +13.1651% +10.7863% +9.4116% +9.0408% +9.1382%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 62233 +7173 +6314 +5526 +5406 +5406 +13.0276% +11.2913% +9.7448% +9.5131% +9.5131%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 19216 +4776 +4258 +3967 +3509 +3509 +33.0748% +28.4664% +26.0148% +22.3404% +22.3404%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 17918 +3435 +2853 +3002 +2848 +2846 +23.7175% +18.9379% +20.1260% +18.8985% +18.8827%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 15643 +6903 +6267 +6254 +6279 +6258 +78.9817% +66.8409% +66.6099% +67.0547% +66.6809%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 16133 +7235 +6874 +6349 +6323 +6323 +81.3104% +74.2413% +64.8917% +64.4546% +64.4546%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 40446 +5581 +4149 +6104 +6021 +6021 +16.0075% +11.4307% +17.7742% +17.4902% +17.4902%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 29005 +4356 +3539 +3886 +3782 +3782 +17.6721% +13.8970% +15.4704% +14.9943% +14.9943%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 44999 +8311 +7323 +7350 +7578 +7540 +22.6532% +19.4368% +19.5224% +20.2507% +20.1287%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 45943 +5787 +4398 +5900 +6050 +5997 +14.4113% +10.5861% +14.7342% +15.1656% +15.0128%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7433 +3767 +3484 +3224 +3187 +3187 +102.7550% +88.2249% +76.5978% +75.0589% +75.0589%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7695 +2396 +2084 +1840 +1629 +1628 +45.2161% +37.1413% +31.4261% +26.8546% +26.8337%
SCP_Astral_250pg_3ms 675 721 908 879 879 3506 +2831 +2785 +2598 +2627 +2627 +419.4074% +386.2691% +286.1233% +298.8623% +298.8623%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 5625 +4189 +3887 +3480 +3462 +3460 +291.7131% +223.6479% +162.2378% +160.0555% +159.8152%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12232 +4438 +4260 +3980 +3826 +3824 +56.9412% +53.4370% +48.2307% +45.5151% +45.4805%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 11746 +2588 +2404 +2375 +2332 +2331 +28.2594% +25.7332% +25.3441% +24.7716% +24.7584%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 7261 +5415 +4661 +4675 +4672 +293.3369% +179.2692% +180.7811% +180.4558%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 10422 +6548 +6267 +5648 +5617 +5618 +169.0243% +150.8303% +118.3075% +116.8991% +116.9442%
SCP_Astral_MBR 24110 24991 24570 24544 24527 28220 +4110 +3229 +3650 +3676 +3693 +17.0469% +12.9207% +14.8555% +14.9772% +15.0569%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61042 +4343 +5249 +5151 +5151 +7.6597% +9.4080% +9.2162% +9.2162%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147
EWZ_2P_MBR_Exploris_Human 48465 48473
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177
MacCoss_Eclipse_Normalization_noNorm 73278 73277
MacCoss_Eclipse_Normalization_yesNorm 73278 73277

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286
MTAC_3P_Alternating 63773 63974 63611 63015 65835 66111 +2338 +2137 +2500 +3096 +276 +3.6661% +3.3404% +3.9301% +4.9131% +0.4192%
MTAC_3P_Standard 64317 64464 64219 63385 65967 66633 +2316 +2169 +2414 +3248 +666 +3.6009% +3.3647% +3.7590% +5.1242% +1.0096%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12691 +624 +721 +751 +452 +5.1711% +6.0234% +6.2898% +3.6931%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13021 +589 +550 +659 +693 +361 +4.7378% +4.4102% +5.3309% +5.6213% +2.8515%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12603 +595 +556 +643 +635 +423 +4.9550% +4.6153% +5.3763% +5.3058% +3.4729%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13122 +561 +657 +645 +712 +348 +4.4662% +5.2708% +5.1695% +5.7373% +2.7243%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11134 +1971 +1606 +1549 +1800 +1112 +21.5104% +16.8556% +16.1607% +19.2843% +11.0956%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 10850 +1552 +1089 +1438 +1297 +861 +16.6918% +11.1566% +15.2784% +13.5769% +8.6195%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9047 +6597 +2963 +2800 +2931 +2698 +269.2653% +48.7015% +44.8215% +47.9235% +42.4949%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6440 +1737 +1852 +1482 +1517 +1491 +36.9339% +40.3662% +29.8911% +30.8145% +30.1273%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17054 +864 +774 +1029 +999 +518 +5.3366% +4.7543% +6.4212% +6.2224% +3.1326%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14212 +613 +371 +524 +541 +228 +4.5077% +2.6804% +3.8282% +3.9573% +1.6304%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17640 +1388 +1364 +1523 +1715 +1182 +8.5405% +8.3804% +9.4496% +10.7692% +7.1819%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18138 +1121 +960 +1225 +1393 +789 +6.5875% +5.5885% +7.2429% +8.3189% +4.5478%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5479 +1832 +1566 +1615 +1940 +1665 +50.2331% +40.0204% +41.7961% +54.8177% +43.6550%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5797 +1497 +1194 +1000 +820 +628 +34.8140% +25.9396% +20.8464% +16.4758% +12.1494%
SCP_Astral_250pg_3ms 576 22 936 741 736 2912 +2336 +2890 +1976 +2171 +2176 +405.5556% +13136.3636% +211.1111% +292.9825% +295.6522%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4425 +3788 +2345 +2396 +2379 +2357 +594.6625% +112.7404% +118.0877% +116.2757% +113.9749%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7848 +1603 +1502 +1832 +1721 +1629 +25.6685% +23.6685% +30.4521% +28.0888% +26.1939%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8138 +1416 +1409 +1126 +1115 +796 +21.0652% +20.9392% +16.0582% +15.8764% +10.8417%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5037 +4055 +2672 +2860 +2801 +412.9328% +112.9810% +131.3734% +125.2683%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 6962 +3254 +2955 +2917 +3044 +2859 +87.7562% +73.7459% +72.1137% +77.6927% +69.6807%
SCP_Astral_MBR 20165 20129 20074 19793 19898 20125 -40 -4 +51 +332 +227 -0.1984% -0.0199% +0.2541% +1.6774% +1.1408%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5028 +343 +328 +396 +289 +7.3212% +6.9787% +8.5492% +6.0983%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422
EWZ_2P_MBR_Exploris_Human 115447 117345
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706
MacCoss_Eclipse_Normalization_noNorm 178174 183543
MacCoss_Eclipse_Normalization_yesNorm 178174 183543

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12128 +767 +634 +777 +790 +330 +6.7512% +5.5159% +6.8452% +6.9677% +2.7971%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12214 +741 +654 +737 +818 +382 +6.4586% +5.6574% +6.4215% +7.1780% +3.2285%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4401 +273 +309 +301 +218 +6.6134% +7.5513% +7.3415% +5.2116%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4461 +246 +213 +243 +247 +124 +5.8363% +5.0141% +5.7610% +5.8614% +2.8591%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4347 +272 +213 +257 +250 +162 +6.6748% +5.1524% +6.2836% +6.1020% +3.8710%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4486 +237 +249 +242 +255 +132 +5.5778% +5.8768% +5.7022% +6.0269% +3.0317%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4013 +768 +624 +602 +695 +452 +23.6672% +18.4125% +17.6488% +20.9464% +12.6931%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3834 +580 +401 +543 +400 +342 +17.8242% +11.6807% +16.4995% +11.6482% +9.7938%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3354 +904 +958 +904 +957 +920 +36.8980% +39.9833% +36.8980% +39.9249% +37.7979%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3432 +924 +996 +798 +790 +849 +36.8421% +40.8867% +30.2961% +29.9016% +32.8688%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 5929 +350 +273 +425 +383 +275 +6.2735% +4.8267% +7.7217% +6.9059% +4.8638%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 4959 +238 +121 +176 +148 +115 +5.0413% +2.5010% +3.6797% +3.0763% +2.3741%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6132 +521 +477 +536 +579 +419 +9.2853% +8.4350% +9.5783% +10.4268% +7.3342%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6277 +431 +328 +434 +472 +312 +7.3726% +5.5135% +7.4277% +8.1309% +5.2305%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2033 +741 +609 +627 +745 +674 +57.3529% +42.7669% +44.5946% +57.8416% +49.5953%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2138 +570 +478 +380 +265 +268 +36.3520% +28.7952% +21.6155% +14.1484% +14.3316%
SCP_Astral_250pg_3ms 307 8 350 283 281 1215 +908 +1207 +865 +932 +934 +295.7655% +15087.5000% +247.1429% +329.3286% +332.3843%
SCP_Astral_250pg_6ms 637 756 751 766 767 1670 +1033 +914 +919 +904 +903 +162.1664% +120.8995% +122.3702% +118.0157% +117.7314%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2870 +663 +595 +701 +640 +653 +30.0408% +26.1538% +32.3190% +28.6996% +29.4542%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2909 +506 +521 +432 +370 +311 +21.0570% +21.8174% +17.4405% +14.5727% +11.9707%
SCP_Astral_500pg_3ms 525 902 828 835 1946 +1421 +1044 +1118 +1111 +270.6667% +115.7428% +135.0242% +133.0539%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2550 +1232 +1103 +1064 +1115 +1082 +93.4750% +76.2267% +71.6016% +77.7003% +73.7057%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4810 +102 +90 +98 +95 +94 +2.1665% +1.9068% +2.0798% +2.0148% +1.9932%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5028 +343 +328 +396 +289 +7.3212% +6.9787% +8.5492% +6.0983%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106
EWZ_2P_MBR_Exploris_Human 6167 6284
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963
MacCoss_Eclipse_Normalization_noNorm 5804 5955
MacCoss_Eclipse_Normalization_yesNorm 5804 5955

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279
MTAC_3P_Alternating 65832 66111 +279
MTAC_3P_Standard 65967 66631 +664
MTAC_Yeast_Alternating_3min 12239 12683 +444
MTAC_Yeast_Alternating_5min 12660 13020 +360
MTAC_Yeast_Standard_3min 12180 12597 +417
MTAC_Yeast_Standard_5min 12772 13118 +346
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11132 +1110
SCP_Astral_1000pg_24ms 9989 10850 +861
SCP_Astral_1000pg_3ms 6349 9044 +2695
SCP_Astral_1000pg_6ms 4949 6438 +1489
SCP_Astral_10ng_12ms 16536 17054 +518
SCP_Astral_10ng_24ms 13982 14212 +230
SCP_Astral_10ng_3ms 16458 17633 +1175
SCP_Astral_10ng_6ms 17349 18138 +789
SCP_Astral_250pg_12ms 3814 5479 +1665
SCP_Astral_250pg_24ms 5169 5797 +628
SCP_Astral_250pg_3ms 736 2910 +2174
SCP_Astral_250pg_6ms 2066 4425 +2359
SCP_Astral_500pg_12ms 6219 7848 +1629
SCP_Astral_500pg_24ms 7342 8138 +796
SCP_Astral_500pg_3ms 2234 5034 +2800
SCP_Astral_500pg_6ms 4103 6962 +2859
SCP_Astral_MBR 19891 20125 +234
Seer_Astral_45 242898
Seer_Astral_single 4739 5028 +289
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422
EWZ_2P_MBR_Exploris_Human 117340
EWZ_2P_MBR_Exploris_YeastHuman 130702
MacCoss_Eclipse_Normalization_noNorm 183540
MacCoss_Eclipse_Normalization_yesNorm 183540

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 0.0075 +0.0079 +0.0075 +0.0085 +0.0082 +0.0082
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 0.0070 +0.0083 +0.0065 +0.0075 +0.0077 +0.0076
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0012 +0.0027 +0.0031 +0.0038 +0.0038
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0018 +0.0022 +0.0031 +0.0032 +0.0033 +0.0033
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 0.0015 +0.0034 +0.0029 +0.0027 +0.0035 +0.0035
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0034 +0.0045 +0.0054 +0.0058 +0.0059
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0077 +0.0100 +0.0107 +0.0098
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0055 +0.0109 +0.0088 +0.0086 +0.0101 +0.0101
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0078 +0.0080 +0.0089 +0.0113 +0.0104 +0.0104
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0029 +0.0051 +0.0046 +0.0053 +0.0053
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0040 +0.0064 +0.0066 +0.0058 +0.0057 +0.0057
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0035 +0.0042 +0.0034 +0.0056 +0.0046 +0.0046
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0040 +0.0079 +0.0080 +0.0037 +0.0092 +0.0092
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0050 +0.0052 +0.0062 +0.0074 +0.0081 +0.0081
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 -0.0020 +0.0049 -0.0020 -0.0020
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0055 +0.0106 +0.0081 +0.0104 +0.0099
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0046 +0.0068 +0.0056 +0.0074 +0.0072 +0.0072
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0018 +0.0031 +0.0042 +0.0031 +0.0029 +0.0029
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0061 +0.0074 +0.0084 +0.0096 +0.0096
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0038 +0.0069 +0.0071 +0.0053 +0.0053
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0032 +0.0058 +0.0051 +0.0046 +0.0054 +0.0054
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0040 +0.0062 +0.0062
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 0.0203 +0.0213 +0.0213 +0.0197 +0.0195 +0.0213
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 0.0158 +0.0171 +0.0183 +0.0187 +0.0184 +0.0201
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0041 +0.0025 +0.0012 +0.0007 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0046 +0.0087 +0.0084 +0.0094 +0.0080 +0.0103
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0010 +0.0049 +0.0038 +0.0010 +0.0018 +0.0015
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0000 +0.0036 +0.0045 +0.0056 +0.0054
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 0.0106 +0.0155 +0.0148 +0.0149 +0.0147
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0086 +0.0156 +0.0144 +0.0156 +0.0156 +0.0169
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0142 +0.0159 +0.0191 +0.0185 +0.0187 +0.0188
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 0.0039 +0.0094 +0.0079 +0.0093 +0.0100
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0039 +0.0076 +0.0112 +0.0106 +0.0100 +0.0100
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 0.0062 +0.0116 +0.0082 +0.0116 +0.0108 +0.0111
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0160 +0.0214 +0.0237 +0.0195 +0.0224 +0.0221
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0095 +0.0136 +0.0136 +0.0120 +0.0107 +0.0137
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0076 -0.0048 -0.0076 +0.0009 -0.0076 -0.0076
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0088 +0.0187 +0.0155 +0.0172 +0.0176 +0.0176
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0119 +0.0155 +0.0159 +0.0105 +0.0140 +0.0143
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0050 +0.0070 +0.0051 +0.0101 +0.0111 +0.0110
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0006 +0.0048 -0.0064 -0.0014 +0.0007 +0.0008
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0069 +0.0114 +0.0115 +0.0077 +0.0125 +0.0112
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0047 +0.0106 +0.0076 +0.0072 +0.0097 +0.0103
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0043 +0.0117 +0.0116
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0069 +0.0070 +0.0066 +0.0071 +0.0070 +0.0070
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0064 +0.0072 +0.0062 +0.0067 +0.0067 +0.0067
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0017 +0.0027 +0.0030 +0.0031 +0.0031
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0018 +0.0022 +0.0026 +0.0028 +0.0027 +0.0027
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0018 +0.0027 +0.0026 +0.0026 +0.0029 +0.0029
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0025 +0.0033 +0.0035 +0.0039 +0.0039
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0072 +0.0087 +0.0101 +0.0090
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0050 +0.0096 +0.0078 +0.0081 +0.0087 +0.0087
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0068 +0.0066 +0.0074 +0.0096 +0.0092 +0.0092
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0029 +0.0045 +0.0038 +0.0044 +0.0044
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0033 +0.0052 +0.0053 +0.0048 +0.0047 +0.0047
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0031 +0.0036 +0.0029 +0.0043 +0.0039 +0.0039
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0050 +0.0080 +0.0076 +0.0052 +0.0081 +0.0081
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0051 +0.0058 +0.0060 +0.0065 +0.0065 +0.0065
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0003 +0.0063 +0.0003 +0.0003
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0049 +0.0086 +0.0070 +0.0079 +0.0079
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0044 +0.0062 +0.0047 +0.0064 +0.0057 +0.0057
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0032 +0.0048 +0.0049 +0.0050 +0.0049 +0.0049
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0058 +0.0039 +0.0061 +0.0073 +0.0073
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0034 +0.0059 +0.0053 +0.0044 +0.0044
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0032 +0.0049 +0.0047 +0.0040 +0.0045 +0.0045
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0040 +0.0062 +0.0062
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 0.0145 +0.0146 +0.0147 +0.0142 +0.0143 +0.0150
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 0.0116 +0.0124 +0.0129 +0.0136 +0.0134 +0.0139
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0021 +0.0015 +0.0013 +0.0009 +0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0018 +0.0056 +0.0040 +0.0043 +0.0032 +0.0043
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0009 +0.0029 +0.0026 +0.0005 +0.0006 +0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0010 +0.0013 +0.0017 +0.0027 +0.0024
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 0.0083 +0.0120 +0.0105 +0.0115 +0.0122
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0057 +0.0106 +0.0113 +0.0115 +0.0100 +0.0117
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0114 +0.0138 +0.0149 +0.0154 +0.0154 +0.0147
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 0.0039 +0.0087 +0.0070 +0.0081 +0.0083
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0035 +0.0057 +0.0081 +0.0073 +0.0068 +0.0075
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 0.0050 +0.0089 +0.0069 +0.0088 +0.0079 +0.0083
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0140 +0.0178 +0.0181 +0.0159 +0.0170 +0.0184
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0079 +0.0092 +0.0110 +0.0082 +0.0079 +0.0107
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0041 +0.0019 +0.0041 +0.0006 -0.0041 -0.0041
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0056 +0.0156 +0.0125 +0.0112 +0.0104 +0.0104
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0091 +0.0131 +0.0126 +0.0098 +0.0119 +0.0113
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0054 +0.0073 +0.0053 +0.0097 +0.0098 +0.0121
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0014 +0.0046 -0.0052 -0.0014 +0.0011 +0.0012
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0063 +0.0083 +0.0085 +0.0054 +0.0091 +0.0081
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0049 +0.0072 +0.0066 +0.0071 +0.0077 +0.0089
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0043 +0.0117 +0.0112
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 +1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 +1 +2 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 +4 +1 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 +4 +0 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 +3 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 +0 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1780 +0.0321 +0.0359 +0.0379 +0.0406 +0.0405
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1714 +0.0321 +0.0352 +0.0363 +0.0391 +0.0389
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1812 +0.0356 +0.0387 +0.0404 +0.0403
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1634 +0.0103 +0.0224 +0.0258 +0.0278 +0.0279
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1888 +0.0190 +0.0248 +0.0272 +0.0288 +0.0290
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1614 +0.0111 +0.0248 +0.0277 +0.0291 +0.0290
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0902 +0.0139 +0.0164 +0.0176 +0.0182 +0.0145
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0874 +0.0151 +0.0172 +0.0175 +0.0186 +0.0157
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0844 +0.0171 +0.0183 +0.0185 +0.0156
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0701 -0.0077 +0.0098 +0.0109 +0.0113 +0.0100
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0847 +0.0055 +0.0091 +0.0094 +0.0075 +0.0073
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0691 -0.0079 +0.0124 +0.0123 +0.0123 +0.0108
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 -0.0107 -0.0020 +0.0070 +0.0012 +0.0000 -0.0669
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0144 -0.0076 +0.0055 -0.0002 -0.0001 -0.0264
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0043 +0.0007 -0.0023 -0.0001 -0.0000 +0.0035
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0577 +0.0012 -0.0008 +0.0020 -0.0002 -0.0689
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0498 -0.0054 -0.0006 -0.0003 +0.0001 -0.0226
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0335 -0.0080 +0.0050 -0.0016 -0.0001 +0.0046
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 -0.0059 -0.0059 +0.0211 -0.0012
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 +0.0062 +0.0047 -0.0191 -0.0001
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 +0.0183 -0.0240 +0.0287 +0.0020
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 +0.0048 -0.0054 -0.0067 +0.0002
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 +0.0009 +0.0001 -0.0089 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 +0.0051 -0.0017 +0.0004 +0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 -0.0032 -0.0062 -0.0160 +0.0006
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 +0.0043 -0.0045 -0.0054 -0.0001
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 +0.0169 -0.0238 +0.0355 +0
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 -0.0094 +0.0009 +0.0076 -0.0005 +0.0006 -0.0645
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0139 -0.0089 +0.0045 +0.0004 +0.0011 -0.0283
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0091 +0.0054 -0.0044 +0.0010 +0.0033 +0.0022
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0565 +0.0013 +0.0005 -0.0055 +0.0004 -0.0645
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0462 -0.0060 -0.0005 -0.0005 -0.0005 -0.0235
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0285 -0.0084 +0.0078 -0.0007 +0.0020 -0.0045
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 -0.0077 -0.0028 +0.0144 -0.0004
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 +0.0048 +0.0016 -0.0170 -0.0057
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 +0.0504 -0.0481 +0.0073 +0.0089
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 +0.0031 -0.0032 -0.0081 +0.0006
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 +0.0011 -0.0008 -0.0084 -0.0000
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 +0.0036 -0.0008 +0.0016 +0.0018
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 +0.0005 -0.0096 -0.0297 +0.0070
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 +0.0056 -0.0034 -0.0033 +0.0038
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 +0.0405 -0.0089 +0.0322 +0.0276
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1980 +0.0343 +0.0202 -0.0086 +0.0005 -0.1104
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1543 +0.0169 -0.0058 +0.0004 +0.0004 -0.0560
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1673 +0.0117 -0.0078 +0.0011 -0.0001 -0.0934
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1744 +0.0441 -0.0007 -0.0136 +0.0007 -0.1243
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1508 +0.0164 -0.0031 -0.0002 +0.0007 -0.0692
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1555 +0.0170 -0.0063 +0.0017 +0.0006 -0.1131
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 +0.0445 +0.0761 -0.1281 +0.0017
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 -0.0103 +0.0134 -0.0147 -0.0018
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 -0.0030 +0.1483 +0.0078 -0.0120
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 +0.0037 +0.0045 +0.0051 +0.0002
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 +0.0676 -0.0087 -0.0168 +0.0006
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 +0.0316 +0.0062 -0.0049 +0.0001
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 -0.0093 +0.0378 -0.0706 +0.0033
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 +0.0977 -0.0155 +0.0159 +0.0001
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 +0.0737 +0.1982 -0.0827 -0.0008
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.1014 +0.0149 -0.0182 -0.0054 +0.1015 -0.1208
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0439 +0.0035 +0.0005 +0.0043 +0.0189 -0.0565
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0653 -0.0157 -0.0104 +0.0083 +0.0352 -0.0821
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0684 -0.0042 +0.0002 -0.0084 +0.0711 -0.1223
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0449 +0.0032 -0.0030 +0.0035 +0.0313 -0.0580
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0597 +0.0000 +0.0073 -0.0081 +0.0305 -0.0962
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 +0.0146 +0.0452 -0.0355 +0.0761
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 -0.0057 -0.0062 -0.0031 +0.0154
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 -0.1294 +0.1626 +0.0090 +0.0813
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 -0.0046 +0.0074 +0.0016 +0.0039
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 +0.0109 -0.0066 +0.0090 -0.0065
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 -0.0053 +0.0093 +0.0025 +0.0083
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 -0.0166 +0.0170 -0.0166 +0.0315
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 +0.0068 -0.0006 -0.0039 +0.0560
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 -0.0891 -0.0032 -0.0082 +0.0618
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 14.0300 +1.2800 +4.9600 +5.6700 +4.7400 +5.9000 +10.0392% +54.6858% +67.8230% +51.0226% +72.5707%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 15.0800 +2.7700 +6.1200 +5.4200 +4.2700 +5.2900 +22.5020% +68.3036% +56.1077% +39.5005% +54.0347%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.3200 +1.0900 +0.9100 +0.3800 +1.0400 +25.7683% +20.6349% +7.6923% +24.2991%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.8000 +0.4200 +1.4200 +1.0500 +1.2600 +1.2400 +7.8067% +32.4201% +22.1053% +27.7533% +27.1930%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.2000 -0.2300 +1.0600 +0.7600 +0.5400 +0.9600 -4.2357% +25.6039% +17.1171% +11.5880% +22.6415%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.9100 +0.3600 +1.4900 +1.3800 +1.4500 +1.3700 +6.4865% +33.7104% +30.4636% +32.5112% +30.1762%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.5400 -0.2500 +0.9500 +0.8900 +1.4500 +1.1800 -4.3178% +20.6972% +19.1398% +35.4523% +27.0642%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 6.2400 -0.0200 +1.8400 +0.3600 +1.2300 -0.3195% +41.8182% +6.1224% +24.5509%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.5200 +1 +1.7900 +0.7200 +1.8800 +1.6900 +22.1239% +47.9893% +15.0000% +51.6484% +44.1253%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.3600 -1.3800 +0.8500 +0.4400 +0.9200 +0.6400 -24.0418% +24.2165% +11.2245% +26.7442% +17.2043%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 7.9500 +0.8800 +2.4200 +2.4400 +2.2100 +2.4800 +12.4470% +43.7613% +44.2831% +38.5017% +45.3382%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 7.8200 +0.2300 +2.0900 +1.6800 +2.2800 +1.9300 +3.0303% +36.4747% +27.3616% +41.1552% +32.7674%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 6.9600 +0.5100 +2.2900 +2.6600 +2.5500 +2.5400 +7.9070% +49.0364% +61.8605% +57.8231% +57.4661%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 7.5400 +0.1600 +2.6100 +2.9100 +1.9200 +2.5800 +2.1680% +52.9412% +62.8510% +34.1637% +52.0161%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 5.1600 +0.4200 +1.5000 +1.7700 +1.5700 +8.8608% +40.9836% +52.2124% +43.7326%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.9000 -0.3600 +1.0600 +1.1400 +0.8400 -6.8441% +27.6042% +30.3191% +20.6897%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.6100 -0.0400 +1.1800 +0.9000 +1.1600 +1.0600 -0.8602% +34.4023% +24.2588% +33.6232% +29.8592%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 5.3200 +1.1500 +2.0300 +1.6300 +2.0500 +1.8000 +27.5779% +61.7021% +44.1734% +62.6911% +51.1364%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.8000 -0.4800 +1.2700 +1.2000 +1.3100 +1.1000 -9.0909% +35.9773% +33.3333% +37.5358% +29.7297%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.4800 -0.0300 +1.6600 +1.3300 +0.6700 +1.4500 -0.5445% +43.4555% +32.0482% +13.9293% +35.9801%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 5.2300 +0.5000 +1.7700 +1.6600 +1.4600 +10.5708% +51.1561% +46.4986% +38.7268%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.4500 +0.8000 +1.8300 +1.7200 +1.6700 +1.9500 +17.2043% +50.5525% +46.1126% +44.1799% +55.7143%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 10.2500 +1.2100 +3.7000 +4.1500 +3.0400 +13.3850% +56.4885% +68.0328% +42.1637%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 6.5900 +2.1200 +2.4500 +1.0100 +1.3700 +47.4273% +59.1787% +18.1004% +26.2452%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png