Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6656655
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1292235 1323737 +227243 +16732 +11782 +30196 +31502 +20.7245% +1.2802% +0.8980% +2.3344% +2.4378%
MTAC_3P_Alternating 586322 615762 610710 599881 621395 637495 +51173 +21733 +26785 +37614 +16100 +8.7278% +3.5294% +4.3859% +6.2702% +2.5909%
MTAC_3P_Standard 596590 623022 617574 607435 625424 638893 +42303 +15871 +21319 +31458 +13469 +7.0908% +2.5474% +3.4521% +5.1788% +2.1536%
MTAC_Yeast_Alternating_3min 137548 136839 135560 145706 149309 +11761 +12470 +13749 +3603 +8.5505% +9.1129% +10.1424% +2.4728%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 164379 167314 +11673 +10763 +10805 +12279 +2935 +7.5000% +6.8751% +6.9038% +7.9201% +1.7855%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 148110 150800 +12291 +11415 +11508 +12915 +2690 +8.8738% +8.1895% +8.2618% +9.3665% +1.8162%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 165591 169557 +10595 +10825 +10397 +11635 +3966 +6.6651% +6.8197% +6.5324% +7.3676% +2.3951%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3412790
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1319303 1338938 +316202 +184269 +215065 +154854 +19635 +30.9173% +15.9586% +19.1361% +13.0780% +1.4883%
SCIEX_3P 672242 749525 722698 714454 743897
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 53263 55911 +15029 +14211 +13486 +13811 +2648 +36.7619% +34.0791% +31.7879% +32.8052% +4.9716%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 51247 53906 +12837 +11504 +11883 +12754 +2659 +31.2572% +27.1308% +28.2774% +30.9924% +5.1886%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 42044 34976 +26236 +11861 +11961 +12063 -7068 +300.1831% +51.3130% +51.9705% +52.6470% -16.8110%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 28680 30222 +13287 +12669 +11813 +11874 +1542 +78.4588% +72.1757% +64.1697% +64.7155% +5.3766%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 114502 119567 +19659 +16676 +20584 +20919 +5065 +19.6771% +16.2074% +20.7955% +21.2057% +4.4235%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 85070 89188 +18090 +16460 +17743 +18062 +4118 +25.4438% +22.6323% +24.8345% +25.3944% +4.8407%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 123935 128867 +23163 +22370 +23245 +24433 +4932 +21.9131% +21.0053% +22.0077% +23.3956% +3.9795%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 128906 134577 +19420 +17261 +20255 +21496 +5671 +16.8639% +14.7133% +17.7175% +19.0094% +4.3993%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 18714 16416 +6222 +5610 +5178 +5183 -2298 +61.0359% +51.9156% +46.0758% +46.1408% -12.2796%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 20673 21873 +7066 +6440 +5832 +6174 +1200 +47.7207% +41.7288% +36.3568% +39.3273% +5.8047%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 8726 5360 +4099 +3328 +2910 +2974 -3366 +325.0595% +163.7795% +118.7755% +124.6438% -38.5744%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16166 9799 +8363 +5016 +4109 +4068 -6367 +582.3816% +104.8714% +72.2144% +70.9824% -39.3851%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 32026 33262 +11552 +11367 +10682 +10799 +1236 +53.2105% +51.9160% +47.3074% +48.0746% +3.8594%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 32256 33947 +8087 +7804 +7687 +8322 +1691 +31.2722% +29.8512% +29.2727% +32.4761% +5.2424%
SCP_Astral_500pg_3ms 3484 6898 6834 19322 13649 +10165 +6751 +6815 -5673 +291.7623% +97.8689% +99.7220% -29.3603%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 28202 16658 +5959 +5184 +3776 +3769 -11544 +55.6968% +45.1804% +29.3122% +29.2420% -40.9333%
SCP_Astral_MBR 92167 93585 91884 90864 108777 113689 +21522 +20104 +21805 +22825 +4912 +23.3511% +21.4821% +23.7310% +25.1200% +4.5157%
Seer_Astral_45 2512737 3124006 3135497 2971207 3001003
Seer_Astral_single 56699 55793 55891 60660 64125 +7426 +8332 +8234 +3465 +13.0972% +14.9338% +14.7322% +5.7122%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17275427
EWZ_2P_MBR_Exploris 1776128 1865977 1898343 +122215 +32366 +6.8810% +1.7345%
EWZ_2P_MBR_Exploris_Human 836809 881569 898860 +62051 +17291 +7.4152% +1.9614%
EWZ_2P_MBR_Exploris_YeastHuman 914924 977795 994684 +79760 +16889 +8.7177% +1.7273%
MacCoss_Eclipse_Normalization_noNorm 2078034 2247711 2291296 +213262 +43585 +10.2627% +1.9391%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2247711 2291296 +213262 +43585 +10.2627% +1.9391%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 107890
KEAP1KO_Eclipse 111504 133619 131359 132031 148329 154533 +43029 +20914 +23174 +22502 +6204 +38.5896% +15.6520% +17.6417% +17.0430% +4.1826%
MTAC_3P_Alternating 108267 117352 114659 114816 123799 126945 +18678 +9593 +12286 +12129 +3146 +17.2518% +8.1746% +10.7153% +10.5639% +2.5412%
MTAC_3P_Standard 110265 118693 115800 116148 124703 128488 +18223 +9795 +12688 +12340 +3785 +16.5265% +8.2524% +10.9568% +10.6244% +3.0352%
MTAC_Yeast_Alternating_3min 48858 49032 48995 55378 56766 +7908 +7734 +7771 +1388 +16.1857% +15.7734% +15.8608% +2.5064%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 61497 63006 +9037 +7931 +7166 +7122 +1509 +16.7448% +14.4004% +12.8331% +12.7443% +2.4538%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 56180 57764 +9143 +8099 +7475 +7304 +1584 +18.8046% +16.3073% +14.8641% +14.4748% +2.8195%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 62196 64053 +8993 +8134 +7346 +7226 +1857 +16.3331% +14.5460% +12.9543% +12.7158% +2.9857%
Olsen_Astral_3P 198770 231103 234505 234149 239695
Olsen_Exploris_3P 51272 58784 55047 58593 72007 75144 +23872 +16360 +20097 +16551 +3137 +46.5595% +27.8307% +36.5088% +28.2474% +4.3565%
SCIEX_3P 82206 93920 87927 87858 102130
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 20401 21714 +7274 +6756 +6465 +6007 +1313 +50.3740% +45.1665% +42.3962% +38.2441% +6.4360%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 19303 20627 +6144 +5562 +5711 +5557 +1324 +42.4222% +36.9200% +38.2877% +36.8746% +6.8590%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 17210 16803 +8063 +7427 +7414 +7439 -407 +92.2540% +79.2129% +78.9647% +79.4425% -2.3649%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 16380 17481 +8583 +8222 +7697 +7671 +1101 +96.4599% +88.8001% +78.6693% +78.1957% +6.7216%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 41662 43944 +9079 +7647 +9602 +9519 +2282 +26.0404% +21.0679% +27.9599% +27.6514% +5.4774%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 31075 32976 +8327 +7510 +7857 +7753 +1901 +33.7823% +29.4903% +31.2791% +30.7378% +6.1175%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 45956 48300 +11612 +10624 +10651 +10879 +2344 +31.6507% +28.1983% +28.2903% +29.0719% +5.1005%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 46670 49562 +9406 +8017 +9519 +9669 +2892 +23.4236% +19.2971% +23.7719% +24.2373% +6.1967%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7634 7444 +3778 +3495 +3235 +3198 -190 +103.0551% +88.5034% +76.8591% +75.3179% -2.4889%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8261 8880 +3581 +3269 +3025 +2814 +619 +67.5788% +58.2606% +51.6652% +46.3897% +7.4930%
SCP_Astral_250pg_3ms 675 721 908 879 4172 2651 +1976 +1930 +1743 +1772 -1521 +292.7407% +267.6838% +191.9604% +201.5927% -36.4573%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6891 4627 +3191 +2889 +2482 +2464 -2264 +222.2145% +166.2255% +115.7110% +113.9159% -32.8544%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 12669 13355 +5561 +5383 +5103 +4949 +686 +71.3498% +67.5238% +61.8396% +58.8746% +5.4148%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 12395 13188 +4030 +3846 +3817 +3774 +793 +44.0052% +41.1689% +40.7320% +40.0892% +6.3977%
SCP_Astral_500pg_3ms 1846 2600 2586 8323 6445 +4599 +3845 +3859 -1878 +249.1333% +147.8846% +149.2266% -22.5640%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 11257 7754 +3880 +3599 +2980 +2949 -3503 +100.1549% +86.6185% +62.4214% +61.3736% -31.1184%
SCP_Astral_MBR 24110 24991 24570 24544 30152 31886 +7776 +6895 +7316 +7342 +1734 +32.2522% +27.5899% +29.7761% +29.9136% +5.7509%
Seer_Astral_45 69584 90103 87204 87620 91412
Seer_Astral_single 56699 55793 55891 60660 64125 +7426 +8332 +8234 +3465 +13.0972% +14.9338% +14.7322% +5.7122%
YEAST_KO_Astral 66823 87888 87428 86498 85126
EWZ_2P_MBR_Exploris 55271 61651 64569 +9298 +2918 +16.8226% +4.7331%
EWZ_2P_MBR_Exploris_Human 48465 53608 56006 +7541 +2398 +15.5597% +4.4732%
EWZ_2P_MBR_Exploris_YeastHuman 51246 57183 60006 +8760 +2823 +17.0940% +4.9368%
MacCoss_Eclipse_Normalization_noNorm 73278 79190 82214 +8936 +3024 +12.1947% +3.8187%
MacCoss_Eclipse_Normalization_yesNorm 73278 79190 82214 +8936 +3024 +12.1947% +3.8187%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 604895
KEAP1KO_Eclipse 87920 92888 93982 93441 90649 91994 +4074 -894 -1988 -1447 +1345 +4.6338% -0.9624% -2.1153% -1.5486% +1.4837%
MTAC_3P_Alternating 63773 63974 63611 63015 65375 66270 +2497 +2296 +2659 +3255 +895 +3.9155% +3.5890% +4.1801% +5.1654% +1.3690%
MTAC_3P_Standard 64317 64464 64219 63385 65743 66651 +2334 +2187 +2432 +3266 +908 +3.6289% +3.3926% +3.7870% +5.1526% +1.3811%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12589 12723 +656 +753 +783 +134 +5.4363% +6.2907% +6.5578% +1.0644%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12877 13015 +583 +544 +653 +687 +138 +4.6895% +4.3621% +5.2823% +5.5727% +1.0717%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12568 12592 +584 +545 +632 +624 +24 +4.8634% +4.5239% +5.2843% +5.2139% +0.1910%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12961 13188 +627 +723 +711 +778 +227 +4.9916% +5.8002% +5.6985% +6.2691% +1.7514%
Olsen_Astral_3P 236395 245756 242430 240719 238322
Olsen_Exploris_3P 146224 153534 153990 155827 156821 159924 +13700 +6390 +5934 +4097 +3103 +9.3692% +4.1619% +3.8535% +2.6292% +1.9787%
SCIEX_3P 70810 74366 72157 71550 73551
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 11410 11830 +2667 +2302 +2245 +2496 +420 +29.1062% +24.1604% +23.4220% +26.7409% +3.6810%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11205 11712 +2414 +1951 +2300 +2159 +507 +25.9626% +19.9877% +24.4369% +22.6002% +4.5248%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 9023 8169 +5719 +2085 +1922 +2053 -854 +233.4286% +34.2702% +30.7668% +33.5677% -9.4647%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6458 6763 +2060 +2175 +1805 +1840 +305 +43.8018% +47.4063% +36.4058% +37.3756% +4.7228%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17253 17681 +1491 +1401 +1656 +1626 +428 +9.2094% +8.6057% +10.3339% +10.1277% +2.4807%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14759 15262 +1663 +1421 +1574 +1591 +503 +12.2288% +10.2666% +11.4991% +11.6378% +3.4081%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 17489 18133 +1881 +1857 +2016 +2208 +644 +11.5740% +11.4094% +12.5085% +13.8650% +3.6823%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18141 18669 +1652 +1491 +1756 +1924 +528 +9.7079% +8.6797% +10.3825% +11.4900% +2.9105%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5202 4935 +1288 +1022 +1071 +1396 -267 +35.3167% +26.1181% +27.7174% +39.4462% -5.1326%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5561 6115 +1815 +1512 +1318 +1138 +554 +42.2093% +32.8481% +27.4755% +22.8652% +9.9622%
SCP_Astral_250pg_3ms 576 22 936 741 2775 2063 +1487 +2041 +1127 +1322 -712 +258.1597% +9277.2727% +120.4060% +178.4076% -25.6577%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4489 3207 +2570 +1127 +1178 +1161 -1282 +403.4537% +54.1827% +58.0582% +56.7449% -28.5587%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7731 8063 +1818 +1717 +2047 +1936 +332 +29.1113% +27.0564% +34.0259% +31.5978% +4.2944%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8125 8386 +1664 +1657 +1374 +1363 +261 +24.7545% +24.6248% +19.5950% +19.4077% +3.2123%
SCP_Astral_500pg_3ms 982 2365 2177 5275 4048 +3066 +1683 +1871 -1227 +312.2200% +71.1628% +85.9440% -23.2607%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7102 4893 +1185 +886 +848 +975 -2209 +31.9579% +22.1113% +20.9642% +24.8851% -31.1039%
SCP_Astral_MBR 20165 20129 20074 19793 20566 21441 +1276 +1312 +1367 +1648 +875 +6.3278% +6.5180% +6.8098% +8.3262% +4.2546%
Seer_Astral_45 225377 241455 241952 237727 233436
Seer_Astral_single 4685 4700 4632 5060 5161 +476 +461 +529 +101 +10.1601% +9.8085% +11.4206% +1.9960%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1341725
EWZ_2P_MBR_Exploris 245259 247748 252200 +6941 +4452 +2.8301% +1.7970%
EWZ_2P_MBR_Exploris_Human 115447 115558 117346 +1899 +1788 +1.6449% +1.5473%
EWZ_2P_MBR_Exploris_YeastHuman 128968 131740 135109 +6141 +3369 +4.7616% +2.5573%
MacCoss_Eclipse_Normalization_noNorm 178174 187459 192313 +14139 +4854 +7.9355% +2.5894%
MacCoss_Eclipse_Normalization_yesNorm 178174 187459 192313 +14139 +4854 +7.9355% +2.5894%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6423
KEAP1KO_Eclipse 7845 8175 8155 8203 8439 8534 +689 +359 +379 +331 +95 +8.7827% +4.3914% +4.6475% +4.0351% +1.1257%
MTAC_3P_Alternating 11361 11494 11351 11338 12050 12190 +829 +696 +839 +852 +140 +7.2969% +6.0553% +7.3914% +7.5146% +1.1618%
MTAC_3P_Standard 11473 11560 11477 11396 12069 12238 +765 +678 +761 +842 +169 +6.6678% +5.8651% +6.6307% +7.3886% +1.4003%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4390 4429 +301 +337 +329 +39 +7.2917% +8.2356% +8.0244% +0.8884%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4457 4497 +282 +249 +279 +283 +40 +6.6904% +5.8616% +6.6145% +6.7157% +0.8975%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4358 4347 +272 +213 +257 +250 -11 +6.6748% +5.1524% +6.2836% +6.1020% -0.2524%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4452 4556 +307 +319 +312 +325 +104 +7.2252% +7.5289% +7.3516% +7.6814% +2.3360%
Olsen_Astral_3P 13820 14378 14293 14296 14585
Olsen_Exploris_3P 7255 7582 7340 7479 7941 8163 +908 +581 +823 +684 +222 +12.5155% +7.6629% +11.2125% +9.1456% +2.7956%
SCIEX_3P 8652 9109 8679 8618 9438
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4115 4270 +1025 +881 +859 +952 +155 +31.5871% +25.9959% +25.1832% +28.6920% +3.7667%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4006 4246 +992 +813 +955 +812 +240 +30.4856% +23.6819% +29.0185% +23.6459% +5.9910%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3337 3438 +988 +1042 +988 +1041 +101 +40.3265% +43.4891% +40.3265% +43.4293% +3.0267%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3456 3645 +1137 +1209 +1011 +1003 +189 +45.3349% +49.6305% +38.3827% +37.9637% +5.4688%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6011 6159 +580 +503 +655 +613 +148 +10.3961% +8.8932% +11.9004% +11.0530% +2.4622%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5220 5357 +636 +519 +574 +546 +137 +13.4717% +10.7276% +12.0008% +11.3490% +2.6245%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6134 6388 +777 +733 +792 +835 +254 +13.8478% +12.9620% +14.1530% +15.0369% +4.1409%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6326 6532 +686 +583 +689 +727 +206 +11.7345% +9.8000% +11.7919% +12.5237% +3.2564%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1985 2042 +750 +618 +636 +754 +57 +58.0495% +43.3989% +45.2347% +58.5404% +2.8715%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2003 2283 +715 +623 +525 +410 +280 +45.5995% +37.5301% +29.8635% +21.8900% +13.9790%
SCP_Astral_250pg_3ms 307 8 350 283 1162 935 +628 +927 +585 +652 -227 +204.5603% +11587.5000% +167.1429% +230.3887% -19.5353%
SCP_Astral_250pg_6ms 637 756 751 766 1745 1362 +725 +606 +611 +596 -383 +113.8148% +80.1587% +81.3582% +77.8068% -21.9484%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2853 2972 +765 +697 +803 +742 +119 +34.6624% +30.6374% +37.0217% +33.2735% +4.1710%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2975 3061 +658 +673 +584 +522 +86 +27.3824% +28.1826% +23.5769% +20.5593% +2.8908%
SCP_Astral_500pg_3ms 525 902 828 2072 1679 +1154 +777 +851 -393 +219.8095% +86.1419% +102.7778% -18.9672%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2624 1983 +665 +536 +497 +548 -641 +50.4552% +37.0422% +33.4455% +38.1882% -24.4284%
SCP_Astral_MBR 4708 4720 4712 4715 5024 5231 +523 +511 +519 +516 +207 +11.1088% +10.8263% +11.0144% +10.9438% +4.1202%
Seer_Astral_45 5802 6297 6122 6133 6231
Seer_Astral_single 4685 4700 4632 5060 5161 +476 +461 +529 +101 +10.1601% +9.8085% +11.4206% +1.9960%
YEAST_KO_Astral 4565 4795 4676 4673 4737
EWZ_2P_MBR_Exploris 7041 7234 7457 +416 +223 +5.9083% +3.0827%
EWZ_2P_MBR_Exploris_Human 6167 6252 6364 +197 +112 +3.1944% +1.7914%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7138 7443 +556 +305 +8.0732% +4.2729%
MacCoss_Eclipse_Normalization_noNorm 5804 6247 6435 +631 +188 +10.8718% +3.0094%
MacCoss_Eclipse_Normalization_yesNorm 5804 6247 6435 +631 +188 +10.8718% +3.0094%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 604890
KEAP1KO_Eclipse 90611 91960 +1349
MTAC_3P_Alternating 65364 66260 +896
MTAC_3P_Standard 65728 66638 +910
MTAC_Yeast_Alternating_3min 12579 12712 +133
MTAC_Yeast_Alternating_5min 12857 12998 +141
MTAC_Yeast_Standard_3min 12560 12584 +24
MTAC_Yeast_Standard_5min 12943 13177 +234
Olsen_Astral_3P 238278
Olsen_Exploris_3P 156819 159918 +3099
SCIEX_3P 73546
SCP_Astral_1000pg_12ms 11409 11824 +415
SCP_Astral_1000pg_24ms 11204 11708 +504
SCP_Astral_1000pg_3ms 9020 8155 -865
SCP_Astral_1000pg_6ms 6450 6751 +301
SCP_Astral_10ng_12ms 17249 17676 +427
SCP_Astral_10ng_24ms 14758 15261 +503
SCP_Astral_10ng_3ms 17484 18122 +638
SCP_Astral_10ng_6ms 18141 18661 +520
SCP_Astral_250pg_12ms 5202 4933 -269
SCP_Astral_250pg_24ms 5557 6112 +555
SCP_Astral_250pg_3ms 2770 1950 -820
SCP_Astral_250pg_6ms 4489 3195 -1294
SCP_Astral_500pg_12ms 7729 8063 +334
SCP_Astral_500pg_24ms 8124 8386 +262
SCP_Astral_500pg_3ms 5272 4043 -1229
SCP_Astral_500pg_6ms 7098 4873 -2225
SCP_Astral_MBR 20564 21437 +873
Seer_Astral_45 233431
Seer_Astral_single 5060 5161 +101
YEAST_KO_Astral 1341718
EWZ_2P_MBR_Exploris 247728 252149 +4421
EWZ_2P_MBR_Exploris_Human 115546 117319 +1773
EWZ_2P_MBR_Exploris_YeastHuman 131734 135082 +3348
MacCoss_Eclipse_Normalization_noNorm 187457 192308 +4851
MacCoss_Eclipse_Normalization_yesNorm 187457 192308 +4851

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0006 -0.0005 +0.0006 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0004 +0.0003 +0.0003
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0012 -0.0009 -0.0004 -0.0008 +0.0001 -0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0015 -0.0015 -0.0001 -0.0019 -0.0009 -0.0008 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0013 -0.0018 -0.0003 +0.0001 +0.0008 -0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0013 -0.0009 -0.0001 +0.0001 +0.0002 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0021 -0.0016 +0.0003 -0.0002 -0.0004 +0.0004 +0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0006 -0.0017 -0.0006 +0.0003 +0.0007 -0.0011
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 0.0002 -0.0004 +0.0003
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0010 0.0004 +0.0006 +0.0001 +0.0015 -0.0001 -0.0006
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0021 -0.0018 +0.0005 +0.0012 +0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0019 -0.0003 +0.0051 +0.0030 +0.0029 +0.0043 -0.0022
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0005 -0.0008 +0.0021 +0.0039 +0.0021 +0.0030 -0.0003
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0002 -0.0023 -0.0021 -0.0012 +0.0013 +0.0003 -0.0021
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0010 0.0001 +0.0023 +0.0018 +0.0026 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0003 -0.0007 +0.0014 -0.0015 +0.0008 +0.0006 -0.0010
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0002 -0.0001 +0.0023 +0.0025 +0.0017 +0.0016 +0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 0.0005 -0.0004 +0.0003 -0.0005 +0.0017 +0.0007 -0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0035 0.0027 +0.0066 +0.0067 +0.0024 +0.0079 -0.0009
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0000 0.0005 +0.0007 +0.0017 +0.0029 +0.0036 +0.0005
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0040 -0.0048 +0.0021 -0.0048 -0.0088
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0012 -0.0001 +0.0049 +0.0025 +0.0048 -0.0014
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0001 0.0005 +0.0027 +0.0015 +0.0033 +0.0031 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0015 -0.0000 +0.0013 +0.0024 +0.0012 +0.0011 -0.0015
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0030 -0.0007 +0.0006 +0.0016 +0.0028 -0.0037
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0024 0.0003 +0.0034 +0.0036 +0.0018 -0.0021
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 0.0007 +0.0033 +0.0026 +0.0021 +0.0029 +0.0015
Seer_Astral_45_Entrapment -0.0023 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0004 +0.0026 +0.0002
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0026 0.0004 -0.0020 +0.0006 -0.0024
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0026 -0.0025 +0.0004 +0.0001
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0041 -0.0038 -0.0028 -0.0027 -0.0043 -0.0045 +0.0003
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0031 -0.0011 +0.0002 +0.0014 +0.0018 +0.0014 +0.0020
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0030 +0.0035 +0.0022 +0.0018 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0009 -0.0027 +0.0014 +0.0011 +0.0021 +0.0007 -0.0018
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0033 -0.0037 +0.0021 +0.0010 -0.0018 -0.0010 -0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0034 +0.0002 +0.0012 +0.0022 +0.0007
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0043 -0.0052 -0.0049 -0.0009
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0023
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0013 +0.0016 -0.0011 +0.0016 -0.0004 -0.0008
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0027
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0022 -0.0044 +0.0005 -0.0003 -0.0002 -0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0060 -0.0038 +0.0032 +0.0020 +0.0032 +0.0032 +0.0022
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0016 -0.0013 +0.0046 +0.0046 +0.0059 +0.0059 -0.0029
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0007 -0.0041 -0.0024 +0.0008 +0.0002 +0.0004 -0.0034
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0065 -0.0047 +0.0007 -0.0008 +0.0006 +0.0017
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0035 -0.0038 -0.0006 -0.0016 -0.0022 +0.0006 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0006 -0.0013 +0.0024 +0.0060 +0.0053 +0.0048 -0.0006
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0019 +0.0035 +0.0001 +0.0035 +0.0027 +0.0017
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0011 -0.0016 +0.0037 +0.0061 +0.0019 +0.0048 -0.0027
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0011 -0.0048 -0.0006 -0.0006 -0.0022 -0.0035 -0.0059
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0117 -0.0030 -0.0002 -0.0030 +0.0055 -0.0030 -0.0147
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0046 0.0013 +0.0112 +0.0080 +0.0097 +0.0101 -0.0033
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0032 0.0004 +0.0039 +0.0043 -0.0011 +0.0024 -0.0028
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0000 -0.0019 +0.0001 -0.0018 +0.0032 +0.0042 -0.0019
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0024 -0.0043 -0.0001 -0.0113 -0.0063 -0.0042 -0.0067
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0018 -0.0047 -0.0002 -0.0001 -0.0039 +0.0009 -0.0064
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0002 -0.0033 +0.0026 -0.0004 -0.0008 +0.0017 -0.0031
Seer_Astral_45_Entrapment -0.0049 -0.0013
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0043 +0.0118 +0.0023
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0003 0.0003 +0.0016 +0.0007
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0005 -0.0002 +0.0001 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0005 -0.0005 -0.0004 -0.0008 -0.0003 -0.0004 +0.0000
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0007 +0.0002 -0.0009 -0.0003 -0.0004 -0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0009 -0.0010 -0.0001 +0.0003 +0.0004 -0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0007 -0.0007 -0.0003 +0.0000 +0.0003 +0.0001 +0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0015 -0.0011 -0.0003 -0.0004 -0.0003 -0.0001 +0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0004 -0.0011 -0.0003 -0.0001 +0.0003 -0.0008
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0003 +0.0000 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0010 0.0007 +0.0011 +0.0002 +0.0013 +0.0007 -0.0003
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0012 -0.0016 -0.0001 +0.0014 -0.0004
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 0.0007 -0.0002 +0.0043 +0.0026 +0.0029 +0.0035 -0.0009
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0006 -0.0008 +0.0012 +0.0021 +0.0017 +0.0018 -0.0002
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0001 -0.0017 -0.0019 -0.0012 +0.0010 +0.0006 -0.0018
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 0.0001 +0.0018 +0.0011 +0.0017 +0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 0.0002 -0.0004 +0.0010 -0.0007 +0.0008 +0.0004 -0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0002 -0.0003 +0.0017 +0.0018 +0.0013 +0.0012 -0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0000 -0.0009 -0.0004 -0.0011 +0.0003 -0.0000 -0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0021 0.0015 +0.0045 +0.0042 +0.0018 +0.0047 -0.0006
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0006 0.0005 +0.0013 +0.0014 +0.0019 +0.0019 +0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0036 -0.0026 +0.0034 -0.0026 -0.0062
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0020 0.0000 +0.0037 +0.0021 +0.0030 -0.0020
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0004 0.0014 +0.0033 +0.0018 +0.0034 +0.0028 +0.0011
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0016 0.0004 +0.0020 +0.0022 +0.0022 +0.0021 -0.0012
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0033 0.0006 -0.0013 +0.0009 +0.0021 -0.0027
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0017 -0.0006 +0.0019 +0.0013 +0.0004 -0.0023
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0001 0.0003 +0.0020 +0.0018 +0.0011 +0.0016 +0.0003
Seer_Astral_45_Entrapment -0.0011 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0004 +0.0026 +0.0002
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0007
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0016 0.0002 +0.0014 -0.0014
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0011 +0.0005 +0.0004
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0021 -0.0020 -0.0019 -0.0018 -0.0023 -0.0023 +0.0000
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0013 -0.0015 -0.0006 -0.0001 +0.0006 +0.0004 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0011 +0.0025 +0.0022 +0.0018 +0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0003 +0.0034 +0.0018 +0.0022 +0.0010 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0024 +0.0013 +0.0011 -0.0011 -0.0009 -0.0008
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0012 +0.0010 +0.0014 +0.0025 +0.0010
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0022 -0.0023 -0.0018 -0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0016
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0008 -0.0016 +0.0011 -0.0022 +0.0001 +0.0000 -0.0008
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0013 -0.0029 +0.0008 -0.0007 +0.0003 -0.0016
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0045 -0.0020 +0.0029 +0.0036 +0.0038 +0.0023 +0.0025
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0005 -0.0016 +0.0027 +0.0016 +0.0024 +0.0014 -0.0022
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0005 -0.0036 -0.0011 -0.0001 +0.0005 +0.0005 -0.0030
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0043 +0.0005 -0.0012 -0.0001 +0.0007
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0027 +0.0005 -0.0014 -0.0013 -0.0002 +0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0015 -0.0007 +0.0015 +0.0039 +0.0031 +0.0026 +0.0009
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0022 +0.0017 -0.0003 +0.0016 +0.0007 +0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0017 -0.0012 +0.0026 +0.0029 +0.0007 +0.0018 -0.0029
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 0.0002 -0.0024 -0.0010 +0.0008 -0.0021 -0.0023 -0.0026
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0100 -0.0026 +0.0034 +0.0056 +0.0021 -0.0026 -0.0126
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0018 0.0011 +0.0111 +0.0079 +0.0066 +0.0058 -0.0008
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0018 0.0004 +0.0044 +0.0039 +0.0011 +0.0032 -0.0014
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0003 -0.0004 +0.0015 -0.0005 +0.0039 +0.0040 -0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0000 -0.0030 +0.0002 -0.0096 -0.0058 -0.0033 -0.0030
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0023 -0.0048 -0.0028 -0.0025 -0.0057 -0.0019 -0.0071
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0005 -0.0032 -0.0008 -0.0014 -0.0009 -0.0003 -0.0027
Seer_Astral_45_Entrapment -0.0029 -0.0000
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0043 +0.0118 +0.0023
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0024

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 6613 4799 -19596 -1814

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 174 214 -557 +40

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0263 0.0446 +0.0130 +0.0183

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 450 -255 -1099 -705

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -61 2 -188 +63

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 15 +4 +1 +1 -3 +3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 11 +4 +0 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 14 +3 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 1 +0 +1 -1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1652 0.1654 +0.0195 +0.0233 +0.0254 +0.0280 +0.0002
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1560 0.1559 +0.0166 +0.0197 +0.0208 +0.0235 -0.0001
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1615 0.1614 +0.0158 +0.0190 +0.0206 -0.0001
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1503 0.1502 -0.0028 +0.0093 +0.0126 +0.0146 -0.0000
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1710 0.1738 +0.0040 +0.0099 +0.0122 +0.0139 +0.0028
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1463 0.1477 -0.0026 +0.0111 +0.0140 +0.0154 +0.0014
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1535 +0.0055 +0.0036 +0.0040 +0.0030 +0.0004
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1542
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5939 0.5938 +0.0069 -0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2052 0.2076 +0.0360 +0.0024

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0840 +0.0077 +0.0102 +0.0114 +0.0120 -0.0003
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0804 +0.0080 +0.0101 +0.0104 +0.0116 -0.0001
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0751 0.0745 +0.0072 +0.0084 +0.0086 -0.0007
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0648 0.0664 -0.0114 +0.0061 +0.0071 +0.0076 +0.0016
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0800 0.0800 +0.0008 +0.0044 +0.0047 +0.0028 +0.0000
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0636 0.0655 -0.0115 +0.0088 +0.0087 +0.0087 +0.0020
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0985 0.0995 -0.0034 -0.0025 -0.0042 -0.0033 +0.0009
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1017
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5812 0.5802 -0.0080 -0.0011
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1380 0.1409 +0.0176 +0.0029

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 0.0008 -0.0086 -0.0020 +0.0070 +0.0012 -0.0769 +0.0078
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0137 -0.0201 -0.0076 +0.0055 -0.0002 -0.0272 +0.0064
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0092 -0.0163 +0.0007 -0.0023 -0.0001 +0.0083 +0.0071
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0754 -0.0757 +0.0012 -0.0008 +0.0020 -0.0514 +0.0003
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0717 -0.0766 -0.0054 -0.0006 -0.0003 -0.0004 +0.0048
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0571 -0.0641 -0.0080 +0.0050 -0.0016 +0.0281 +0.0070
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0453 +0.0114 +0.0329 -0.0052 -0.0508
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1858 +0.0115 +0.0151 +0.0011 -0.0433
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1736 -0.0082 +0.0282 -0.0195 +0.1538
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0286 +0.0067 +0.0305 +0.0014 -0.0136
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3292 +0.0081 +0.0093 -0.0002 -0.0137
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1211 -0.0024 -0.0402 -0.0016 +0.0876
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2195 +0.0015 +0.0038 -0.0038 -0.0083
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2343 +0.0262 -0.0191 +0.0011 +0.0320
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1334 0.1362 -0.0059 -0.0059 +0.0211 -0.1031 +0.0028
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0845 -0.0853 +0.0062 +0.0047 -0.0191 +0.0240 +0.0009
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2000 0.1987 +0.0183 -0.0240 +0.0287 -0.0785 -0.0013
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1045 0.1047 +0.0048 -0.0054 -0.0067 +0.0163 +0.0002
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0484 +0.0009 +0.0001 -0.0089 +0.0026 +0.0002
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2158 0.2146 +0.0051 -0.0017 +0.0004 +0.0122 -0.0012
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1446 0.1434 -0.0032 -0.0062 -0.0160 +0.1222 -0.0012
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0785 -0.0772 +0.0043 -0.0045 -0.0054 -0.0235 -0.0013
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0507 0.0447 +0.0169 -0.0238 +0.0355 -0.0458 -0.0059
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0385 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0065 -0.0031 +0.0125 +0.0006 -0.0615
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0309 -0.0051 -0.0071 +0.0012 +0.0273
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0760 +0.0119 -0.0026 -0.0002 +0.0335
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0249
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0162 -0.0331 +0.0073 +0.0004 -0.0068
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0563
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1548 -0.0356 -0.0145 +0.0024 +0.0961
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1053 -0.0468 -0.0064 -0.0010 +0.0685

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0010 -0.0054 +0.0009 +0.0076 -0.0005 -0.0723 +0.0044
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0150 -0.0211 -0.0089 +0.0045 +0.0004 -0.0261 +0.0061
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0001 -0.0111 +0.0054 -0.0044 +0.0010 -0.0034 +0.0109
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0770 -0.0752 +0.0013 +0.0005 -0.0055 -0.0436 -0.0019
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0699 -0.0752 -0.0060 -0.0005 -0.0005 -0.0002 +0.0053
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0489 -0.0617 -0.0084 +0.0078 -0.0007 +0.0180 +0.0128
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0544 +0.0142 +0.0365 -0.0057 -0.0359
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1346 +0.0050 +0.0043 -0.0072 -0.0288
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1874 -0.0338 -0.0246 +0.0154 +0.1702
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0229 +0.0064 +0.0290 +0.0021 -0.0296
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3048 +0.0072 +0.0066 -0.0010 -0.0008
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1116 +0.0002 -0.0402 -0.0012 +0.0829
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1028 +0.0124 -0.0135 -0.0021 +0.0517
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1962 -0.0003 +0.0009 -0.0042 +0.0005
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1989 +0.0289 -0.0188 +0.0012 +0.0186
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1590 0.1606 -0.0077 -0.0028 +0.0144 -0.0621 +0.0016
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0790 -0.0773 +0.0048 +0.0016 -0.0170 +0.0233 -0.0017
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2372 0.2548 +0.0504 -0.0481 +0.0073 -0.0282 +0.0176
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0985 0.1009 +0.0031 -0.0032 -0.0081 +0.0226 +0.0024
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0444 -0.0445 +0.0011 -0.0008 -0.0084 +0.0023 +0.0000
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2255 0.2245 +0.0036 -0.0008 +0.0016 +0.0222 -0.0010
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1259 0.1373 +0.0005 -0.0096 -0.0297 +0.1213 +0.0114
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0774 -0.0736 +0.0056 -0.0034 -0.0033 -0.0311 -0.0038
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0658 0.0472 +0.0405 -0.0089 +0.0322 -0.0515 -0.0185
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0464 +0.0258 +0.0029 -0.0003 -0.0236
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0237 -0.0049 +0.0142 +0.0054 -0.0441
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0289 -0.0001 -0.0108 +0.0000 +0.0248
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0809 +0.0137 -0.0048 +0.0001 +0.0402
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0984 -0.0232 +0.0027 +0.0012 +0.0358
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0184 -0.0350 +0.0076 +0.0002 -0.0033
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0658 +0.0131 -0.0109 +0.0003 +0.0542
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1615 -0.0435 -0.0160 +0.0023 +0.1036
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.1007 -0.0508 -0.0078 +0.0009 +0.0564

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1266 0.1350 +0.0343 +0.0202 -0.0086 -0.1812 +0.0083
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1144 0.1153 +0.0169 -0.0058 +0.0004 -0.0955 +0.0009
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1190 0.1218 +0.0117 -0.0078 +0.0011 -0.1419 +0.0029
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1431 0.1341 +0.0441 -0.0007 -0.0136 -0.1549 -0.0090
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1266 0.1247 +0.0164 -0.0031 -0.0002 -0.0926 -0.0019
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1285 0.1282 +0.0170 -0.0063 +0.0017 -0.1395 -0.0003
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1525 +0.0354 +0.0384 -0.0420 -0.4231
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2166 +0.0422 -0.0321 -0.0167 -0.1334
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3611 +0.2175 -0.0279 -0.1166 -0.8801
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1400 +0.0427 +0.0074 -0.0036 -0.1164
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2295 +0.0473 +0.0030 -0.0078 -0.1061
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1770 +0.0549 +0.0262 -0.0056 -0.2031
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1429 +0.0358 +0.0129 -0.0110 -0.1886
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1910 +0.0274 +0.0045 -0.0018 -0.0944
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1946 +0.0778 +0.0001 -0.0169 -0.3438
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1875 0.1948 +0.0445 +0.0761 -0.1281 -0.3834 +0.0073
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0485 0.0436 -0.0103 +0.0134 -0.0147 -0.1027 -0.0050
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3018 0.3080 -0.0030 +0.1483 +0.0078 -0.6557 +0.0062
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1851 0.1834 +0.0037 +0.0045 +0.0051 -0.1654 -0.0017
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0430 0.0431 +0.0676 -0.0087 -0.0168 -0.1087 +0.0000
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1860 0.1843 +0.0316 +0.0062 -0.0049 -0.1493 -0.0017
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2052 0.2049 -0.0093 +0.0378 -0.0706 -0.3716 -0.0003
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0596 0.0572 +0.0977 -0.0155 +0.0159 -0.1882 -0.0024
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4715 0.3574 +0.0737 +0.1982 -0.0827 -0.8036 -0.1141
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1056 +0.0321 -0.0450 -0.0051 -0.3770
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1288 +0.0200 -0.0293 -0.0344 -0.4130
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0783 +0.0068 -0.0387 -0.0080 -0.0284
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0871 +0.0190 -0.0584 -0.0028 -0.0649
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0977 +0.0281 -0.0478 -0.0031 -0.0967
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0885 +0.0273 -0.0601 -0.0037 -0.0455
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1008 +0.0130 -0.0614 -0.0008 -0.0842
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1632 +0.0619 -0.0455 -0.0143 -0.4108
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1083 +0.0688 -0.0494 -0.0103 -0.3888

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0570 0.0595 +0.0149 -0.0182 -0.0054 -0.0638 +0.0025
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0350 0.0342 +0.0035 +0.0005 +0.0043 -0.0465 -0.0007
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0396 0.0468 -0.0157 -0.0104 +0.0083 -0.0726 +0.0072
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0483 0.0401 -0.0042 +0.0002 -0.0084 -0.0713 -0.0082
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0383 0.0394 +0.0032 -0.0030 +0.0035 -0.0334 +0.0012
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0521 0.0469 +0.0000 +0.0073 -0.0081 -0.0733 -0.0052
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0444 +0.0402 -0.0136 +0.0467 -0.2213
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0756 +0.0316 -0.0208 -0.0112 -0.0330
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.0864 +0.1306 -0.0136 -0.0647 -0.3064
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0220 +0.0032 +0.0034 -0.0021 -0.0245
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0454 +0.0110 -0.0047 +0.0013 -0.0171
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0271 +0.0055 -0.0000 +0.0038 -0.0350
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0294 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0097
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0363 +0.0296 -0.0022 -0.0025 -0.0845
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0480 0.0460 +0.0146 +0.0452 -0.0355 -0.1797 -0.0020
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0174 0.0205 -0.0057 -0.0062 -0.0031 -0.0312 +0.0031
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0995 0.1393 -0.1294 +0.1626 +0.0090 -0.4010 +0.0398
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0336 0.0358 -0.0046 +0.0074 +0.0016 -0.0355 +0.0022
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0094 0.0087 +0.0109 -0.0066 +0.0090 -0.0340 -0.0007
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0353 0.0400 -0.0053 +0.0093 +0.0025 -0.0471 +0.0047
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0632 0.0816 -0.0166 +0.0170 -0.0166 -0.1543 +0.0185
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0192 0.0186 +0.0068 -0.0006 -0.0039 -0.0545 -0.0006
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1308 0.0956 -0.0891 -0.0032 -0.0082 -0.2996 -0.0352
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0565 +0.0682 -0.0593 -0.0056 -0.1658
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0758 +0.0668 -0.0849 -0.0031 -0.1677
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0332 +0.0113 -0.0357 +0.0198 -0.0196
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0243 -0.0054 -0.0154 +0.0040 -0.0244
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0262 -0.0011 -0.0225 +0.0112 -0.0346
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0243 +0.0094 -0.0181 -0.0013 -0.0214
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0342 -0.0134 -0.0199 -0.0090 -0.0333
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0576 +0.0271 -0.0671 +0.0055 -0.2016
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0403 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 118.1000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 13.5100 19.2600 -4.8100 +1.9400 -0.6100 +2.1300 +5.7500 -19.9834% +11.2009% -3.0700% +12.4343% +42.5611%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.4300 9.4500 -3.3000 +0.3800 +1.0900 +0.1600 +2.0200 -25.8824% +4.1896% +13.0383% +1.7223% +27.1871%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.2800 10.2300 -2.0800 +1.2700 +0.5700 -0.5800 +2.9500 -16.8968% +14.1741% +5.9006% -5.3654% +40.5220%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.7800 4.8100 +0.5800 +0.4000 -0.1300 +0.0300 +13.7116% +9.0703% -2.6316% +0.6276%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4000 5.0900 -0.2900 +0.7100 +0.3400 +0.5500 -0.3100 -5.3903% +16.2100% +7.1579% +12.1145% -5.7407%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.5600 4.8200 -0.6100 +0.6800 +0.3800 +0.1600 +0.2600 -11.2339% +16.4251% +8.5586% +3.4335% +5.7018%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9700 5.1000 -0.4500 +0.6800 +0.5700 +0.6400 +0.1300 -8.1081% +15.3846% +12.5828% +14.3498% +2.6157%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 48.4900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 16.6200 17.7300 -9.9300 -2.0300 -0.5900 -1.5500 +1.1100 -35.9002% -10.2733% -3.2205% -8.0394% +6.6787%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.8600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.0300 5.3000 -0.4900 +0.7100 +0.6500 +1.2100 +0.2700 -8.4629% +15.4684% +13.9785% +29.5844% +5.3678%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4200 4.9600 -1.3000 +0.5600 -0.9200 -0.4600 -20.7668% +12.7273% -15.6463% -8.4871%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.5400 5.2600 +0.7400 +1.5300 +0.4600 +1.6200 +0.7200 +16.3717% +41.0188% +9.5833% +44.5055% +15.8590%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.2100 4.6500 -1.0900 +1.1400 +0.7300 +1.2100 +0.4400 -18.9895% +32.4786% +18.6224% +35.1744% +10.4513%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.2500 6.0200 -1.0500 +0.4900 +0.5100 +0.2800 +0.7700 -14.8515% +8.8608% +9.2559% +4.8780% +14.6667%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.4100 6.0500 -1.5400 +0.3200 -0.0900 +0.5100 +0.6400 -20.2899% +5.5846% -1.4658% +9.2058% +11.8299%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2600 6.1700 -0.2800 +1.5000 +1.8700 +1.7600 +0.9100 -4.3411% +32.1199% +43.4884% +39.9093% +17.3004%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.1400 6.2400 -1.1400 +1.3100 +1.6100 +0.6200 +1.1000 -15.4472% +26.5720% +34.7732% +11.0320% +21.4008%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.7700 4.3100 -0.4300 +0.6500 +0.9200 -0.4600 -9.0717% +17.7596% +27.1386% -9.6436%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.6800 4.8000 -0.4600 +0.9600 +1.0400 +0.1200 -8.7452% +25% +27.6596% +2.5641%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.8300 3.6400 -1.0100 +0.2100 -0.0700 +0.1900 -0.1900 -21.7204% +6.1224% -1.8868% +5.5072% -4.9608%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.6900 3.8800 -0.2900 +0.5900 +0.1900 +0.6100 -0.8100 -6.9544% +17.9331% +5.1491% +18.6544% -17.2708%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2300 4.4500 -0.8300 +0.9200 +0.8500 +0.9600 +0.2200 -15.7197% +26.0623% +23.6111% +27.5072% +5.2009%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.8700 5.0700 -0.4400 +1.2500 +0.9200 +0.2600 +0.2000 -7.9855% +32.7225% +22.1687% +5.4054% +4.1068%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5 3.7600 -0.9700 +0.3000 +0.1900 -1.2400 -20.5074% +8.6705% +5.3221% -24.8000%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.5400 3.8900 -0.7600 +0.2700 +0.1600 +0.1100 -0.6500 -16.3441% +7.4586% +4.2895% +2.9101% -14.3172%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5000 7.0200 -2.0200 +0.4700 +0.9200 -0.4800 -22.3451% +7.1756% +15.0820% -6.4000%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 67.1900
Seer_Astral_single 4.4700 4.1400 5.5800 5.8300 5.8300 +1.3600 +1.6900 +0.2500 +0 +30.4251% +40.8213% +4.4803% +0%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 148
EWZ_2P_MBR_Exploris 26.1800 19.1700 26.6000 +0.4200 +7.4300 +1.6043% +38.7585%
EWZ_2P_MBR_Exploris_Human 12.9100 11.3400 14.6600 +1.7500 +3.3200 +13.5554% +29.2769%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.8500 15.0800 +3.0200 +3.2300 +25.0415% +27.2574%
MacCoss_Eclipse_Normalization_noNorm 27.5100 27.3400 36.5300 +9.0200 +9.1900 +32.7881% +33.6138%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.1700 35.7800 +8.1100 +7.6100 +29.3097% +27.0146%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png