Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6656655
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1292235 1319421 +222927 +12416 +7466 +25880 +27186 +20.3309% +0.9500% +0.5691% +2.0007% +2.1038%
MTAC_3P_Alternating 586322 615762 610710 599881 621395 642371 +56049 +26609 +31661 +42490 +20976 +9.5594% +4.3213% +5.1843% +7.0831% +3.3756%
MTAC_3P_Standard 596590 623022 617574 607435 625424 645885 +49295 +22863 +28311 +38450 +20461 +8.2628% +3.6697% +4.5842% +6.3299% +3.2715%
MTAC_Yeast_Alternating_3min 137548 136839 135560 145706 150611 +13063 +13772 +15051 +4905 +9.4970% +10.0644% +11.1028% +3.3664%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 164379 168920 +13279 +12369 +12411 +13885 +4541 +8.5318% +7.9009% +7.9299% +8.9560% +2.7625%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 148110 151926 +13417 +12541 +12634 +14041 +3816 +9.6867% +8.9974% +9.0702% +10.1831% +2.5765%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 165591 172199 +13237 +13467 +13039 +14277 +6608 +8.3271% +8.4841% +8.1924% +9.0405% +3.9906%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3412790
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1319303 1340108 +317372 +185439 +216235 +156024 +20805 +31.0317% +16.0599% +19.2402% +13.1768% +1.5770%
SCIEX_3P 672242 749525 722698 714454 743897
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 53263 56183 +15301 +14483 +13758 +14083 +2920 +37.4272% +34.7314% +32.4290% +33.4513% +5.4822%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 51247 53958 +12889 +11556 +11935 +12806 +2711 +31.3838% +27.2534% +28.4011% +31.1188% +5.2901%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 42044 44765 +36025 +21650 +21750 +21852 +2721 +412.1854% +93.6621% +94.5036% +95.3694% +6.4718%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 28680 30536 +13601 +12983 +12127 +12188 +1856 +80.3130% +73.9646% +65.8754% +66.4269% +6.4714%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 114502 120672 +20764 +17781 +21689 +22024 +6170 +20.7831% +17.2814% +21.9118% +22.3258% +5.3886%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 85070 89628 +18530 +16900 +18183 +18502 +4558 +26.0626% +23.2373% +25.4503% +26.0130% +5.3579%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 123935 130258 +24554 +23761 +24636 +25824 +6323 +23.2290% +22.3114% +23.3247% +24.7276% +5.1019%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 128906 135600 +20443 +18284 +21278 +22519 +6694 +17.7523% +15.5853% +18.6123% +19.9140% +5.1929%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 18714 19672 +9478 +8866 +8434 +8439 +958 +92.9763% +82.0470% +75.0489% +75.1269% +5.1192%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 20673 22062 +7255 +6629 +6021 +6363 +1389 +48.9971% +42.9534% +37.5351% +40.5312% +6.7189%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 8726 9072 +7811 +7040 +6622 +6686 +346 +619.4290% +346.4567% +270.2857% +280.2179% +3.9652%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16166 16153 +14717 +11370 +10463 +10422 -13 +1024.8607% +237.7169% +183.8840% +181.8531% -0.0804%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 32026 33425 +11715 +11530 +10845 +10962 +1399 +53.9613% +52.6604% +48.0292% +48.8002% +4.3683%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 32256 33542 +7682 +7399 +7282 +7917 +1286 +29.7061% +28.3020% +27.7304% +30.8956% +3.9869%
SCP_Astral_500pg_3ms 3484 6898 6834 19322 21043 +17559 +14145 +14209 +1721 +503.9897% +205.0594% +207.9163% +8.9069%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 28202 30659 +19960 +19185 +17777 +17770 +2457 +186.5595% +167.2041% +137.9988% +137.8695% +8.7121%
SCP_Astral_MBR 92167 93585 91884 90864 108777 114255 +22088 +20670 +22371 +23391 +5478 +23.9652% +22.0869% +24.3470% +25.7429% +5.0360%
Seer_Astral_45 2512737 3124006 3135497 2971207 3001003
Seer_Astral_single 56699 55793 55891 60660 64286 +7587 +8493 +8395 +3626 +13.3812% +15.2223% +15.0203% +5.9776%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17275427
EWZ_2P_MBR_Exploris 1776128 1865977 1896200 +120072 +30223 +6.7603% +1.6197%
EWZ_2P_MBR_Exploris_Human 836809 881569 895671 +58862 +14102 +7.0341% +1.5996%
EWZ_2P_MBR_Exploris_YeastHuman 914924 977795 1001462 +86538 +23667 +9.4585% +2.4204%
MacCoss_Eclipse_Normalization_noNorm 2078034 2247711 2319323 +241289 +71612 +11.6114% +3.1860%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2247711 2319323 +241289 +71612 +11.6114% +3.1860%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 107890
KEAP1KO_Eclipse 111504 133619 131359 132031 148329 154732 +43228 +21113 +23373 +22701 +6403 +38.7681% +15.8009% +17.7932% +17.1937% +4.3168%
MTAC_3P_Alternating 108267 117352 114659 114816 123799 129132 +20865 +11780 +14473 +14316 +5333 +19.2718% +10.0382% +12.6226% +12.4686% +4.3078%
MTAC_3P_Standard 110265 118693 115800 116148 124703 129938 +19673 +11245 +14138 +13790 +5235 +17.8416% +9.4740% +12.2090% +11.8728% +4.1980%
MTAC_Yeast_Alternating_3min 48858 49032 48995 55378 57210 +8352 +8178 +8215 +1832 +17.0944% +16.6789% +16.7670% +3.3082%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 61497 63512 +9543 +8437 +7672 +7628 +2015 +17.6824% +15.3191% +13.7393% +13.6497% +3.2766%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 56180 58065 +9444 +8400 +7776 +7605 +1885 +19.4237% +16.9133% +15.4626% +15.0713% +3.3553%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 62196 64736 +9676 +8817 +8029 +7909 +2540 +17.5736% +15.7674% +14.1587% +13.9177% +4.0839%
Olsen_Astral_3P 198770 231103 234505 234149 239695
Olsen_Exploris_3P 51272 58784 55047 58593 72007 75393 +24121 +16609 +20346 +16800 +3386 +47.0452% +28.2543% +36.9611% +28.6724% +4.7023%
SCIEX_3P 82206 93920 87927 87858 102130
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 20401 21653 +7213 +6695 +6404 +5946 +1252 +49.9515% +44.7587% +41.9962% +37.8557% +6.1370%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 19303 20762 +6279 +5697 +5846 +5692 +1459 +43.3543% +37.8161% +39.1928% +37.7704% +7.5584%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 17210 18498 +9758 +9122 +9109 +9134 +1288 +111.6476% +97.2910% +97.0178% +97.5438% +7.4840%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 16380 17633 +8735 +8374 +7849 +7823 +1253 +98.1681% +90.4417% +80.2228% +79.7452% +7.6496%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 41662 44405 +9540 +8108 +10063 +9980 +2743 +27.3627% +22.3379% +29.3023% +28.9906% +6.5839%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 31075 33320 +8671 +7854 +8201 +8097 +2245 +35.1779% +30.8411% +32.6486% +32.1017% +7.2245%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 45956 49002 +12314 +11326 +11353 +11581 +3046 +33.5641% +30.0616% +30.1549% +30.9479% +6.6281%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 46670 50105 +9949 +8560 +10062 +10212 +3435 +24.7759% +20.6042% +25.1280% +25.5985% +7.3602%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7634 8152 +4486 +4203 +3943 +3906 +518 +122.3677% +106.4320% +93.6802% +91.9925% +6.7854%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8261 8936 +3637 +3325 +3081 +2870 +675 +68.6356% +59.2586% +52.6217% +47.3129% +8.1709%
SCP_Astral_250pg_3ms 675 721 908 879 4172 4265 +3590 +3544 +3357 +3386 +93 +531.8519% +491.5395% +369.7137% +385.2105% +2.2291%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6891 6851 +5415 +5113 +4706 +4688 -40 +377.0891% +294.1887% +219.3939% +216.7360% -0.5805%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 12669 13347 +5553 +5375 +5095 +4941 +678 +71.2471% +67.4235% +61.7426% +58.7794% +5.3516%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 12395 13160 +4002 +3818 +3789 +3746 +765 +43.6995% +40.8692% +40.4333% +39.7918% +6.1718%
SCP_Astral_500pg_3ms 1846 2600 2586 8323 9119 +7273 +6519 +6533 +796 +393.9870% +250.7308% +252.6295% +9.5639%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 11257 12412 +8538 +8257 +7638 +7607 +1155 +220.3924% +198.7244% +159.9916% +158.3143% +10.2603%
SCP_Astral_MBR 24110 24991 24570 24544 30152 32364 +8254 +7373 +7794 +7820 +2212 +34.2348% +29.5026% +31.7216% +31.8611% +7.3362%
Seer_Astral_45 69584 90103 87204 87620 91412
Seer_Astral_single 56699 55793 55891 60660 64286 +7587 +8493 +8395 +3626 +13.3812% +15.2223% +15.0203% +5.9776%
YEAST_KO_Astral 66823 87888 87428 86498 85126
EWZ_2P_MBR_Exploris 55271 61651 64694 +9423 +3043 +17.0487% +4.9358%
EWZ_2P_MBR_Exploris_Human 48465 53608 56003 +7538 +2395 +15.5535% +4.4676%
EWZ_2P_MBR_Exploris_YeastHuman 51246 57183 60246 +9000 +3063 +17.5623% +5.3565%
MacCoss_Eclipse_Normalization_noNorm 73278 79190 82947 +9669 +3757 +13.1950% +4.7443%
MacCoss_Eclipse_Normalization_yesNorm 73278 79190 82947 +9669 +3757 +13.1950% +4.7443%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 604895
KEAP1KO_Eclipse 87920 92888 93982 93441 90649 91990 +4070 -898 -1992 -1451 +1341 +4.6292% -0.9668% -2.1196% -1.5529% +1.4793%
MTAC_3P_Alternating 63773 63974 63611 63015 65375 66620 +2847 +2646 +3009 +3605 +1245 +4.4643% +4.1361% +4.7303% +5.7209% +1.9044%
MTAC_3P_Standard 64317 64464 64219 63385 65743 66963 +2646 +2499 +2744 +3578 +1220 +4.1140% +3.8766% +4.2729% +5.6449% +1.8557%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12589 12702 +635 +732 +762 +113 +5.2623% +6.1153% +6.3819% +0.8976%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12877 13061 +629 +590 +699 +733 +184 +5.0595% +4.7310% +5.6544% +5.9458% +1.4289%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12568 12685 +677 +638 +725 +717 +117 +5.6379% +5.2959% +6.0619% +5.9910% +0.9309%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12961 13154 +593 +689 +677 +744 +193 +4.7210% +5.5275% +5.4260% +5.9952% +1.4891%
Olsen_Astral_3P 236395 245756 242430 240719 238322
Olsen_Exploris_3P 146224 153534 153990 155827 156821 159848 +13624 +6314 +5858 +4021 +3027 +9.3172% +4.1124% +3.8041% +2.5804% +1.9302%
SCIEX_3P 70810 74366 72157 71550 73551
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 11410 11858 +2695 +2330 +2273 +2524 +448 +29.4118% +24.4542% +23.7141% +27.0409% +3.9264%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11205 11774 +2476 +2013 +2362 +2221 +569 +26.6294% +20.6229% +25.0956% +23.2492% +5.0781%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 9023 9963 +7513 +3879 +3716 +3847 +940 +306.6531% +63.7574% +59.4846% +62.9006% +10.4178%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6458 6839 +2136 +2251 +1881 +1916 +381 +45.4178% +49.0628% +37.9387% +38.9194% +5.8997%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17253 17867 +1677 +1587 +1842 +1812 +614 +10.3582% +9.7482% +11.4945% +11.2862% +3.5588%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14759 15337 +1738 +1496 +1649 +1666 +578 +12.7804% +10.8085% +12.0470% +12.1864% +3.9163%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 17489 18297 +2045 +2021 +2180 +2372 +808 +12.5831% +12.4171% +13.5261% +14.8948% +4.6200%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18141 18935 +1918 +1757 +2022 +2190 +794 +11.2711% +10.2282% +11.9553% +13.0785% +4.3768%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5202 5638 +1991 +1725 +1774 +2099 +436 +54.5928% +44.0838% +45.9110% +59.3105% +8.3814%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5561 6131 +1831 +1528 +1334 +1154 +570 +42.5814% +33.1957% +27.8090% +23.1867% +10.2500%
SCP_Astral_250pg_3ms 576 22 936 741 2775 2837 +2261 +2815 +1901 +2096 +62 +392.5347% +12795.4545% +203.0983% +282.8610% +2.2342%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4489 4495 +3858 +2415 +2466 +2449 +6 +605.6515% +116.1058% +121.5377% +119.6970% +0.1337%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7731 7961 +1716 +1615 +1945 +1834 +230 +27.4780% +25.4491% +32.3305% +29.9331% +2.9750%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8125 8375 +1653 +1646 +1363 +1352 +250 +24.5909% +24.4613% +19.4381% +19.2510% +3.0769%
SCP_Astral_500pg_3ms 982 2365 2177 5275 5607 +4625 +3242 +3430 +332 +470.9776% +137.0825% +157.5563% +6.2938%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7102 7766 +4058 +3759 +3721 +3848 +664 +109.4391% +93.8108% +91.9901% +98.2134% +9.3495%
SCP_Astral_MBR 20165 20129 20074 19793 20566 21664 +1499 +1535 +1590 +1871 +1098 +7.4337% +7.6258% +7.9207% +9.4528% +5.3389%
Seer_Astral_45 225377 241455 241952 237727 233436
Seer_Astral_single 4685 4700 4632 5060 5259 +574 +559 +627 +199 +12.2519% +11.8936% +13.5363% +3.9328%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1341725
EWZ_2P_MBR_Exploris 245259 247748 251899 +6640 +4151 +2.7073% +1.6755%
EWZ_2P_MBR_Exploris_Human 115447 115558 117225 +1778 +1667 +1.5401% +1.4426%
EWZ_2P_MBR_Exploris_YeastHuman 128968 131740 134648 +5680 +2908 +4.4042% +2.2074%
MacCoss_Eclipse_Normalization_noNorm 178174 187459 194935 +16761 +7476 +9.4071% +3.9881%
MacCoss_Eclipse_Normalization_yesNorm 178174 187459 194935 +16761 +7476 +9.4071% +3.9881%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6423
KEAP1KO_Eclipse 7845 8175 8155 8203 8439 8548 +703 +373 +393 +345 +109 +8.9611% +4.5627% +4.8191% +4.2058% +1.2916%
MTAC_3P_Alternating 11361 11494 11351 11338 12050 12280 +919 +786 +929 +942 +230 +8.0891% +6.8384% +8.1843% +8.3083% +1.9087%
MTAC_3P_Standard 11473 11560 11477 11396 12069 12287 +814 +727 +810 +891 +218 +7.0949% +6.2889% +7.0576% +7.8185% +1.8063%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4390 4412 +284 +320 +312 +22 +6.8798% +7.8201% +7.6098% +0.5011%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4457 4508 +293 +260 +290 +294 +51 +6.9514% +6.1205% +6.8753% +6.9767% +1.1443%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4358 4380 +305 +246 +290 +283 +22 +7.4847% +5.9507% +7.0905% +6.9075% +0.5048%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4452 4528 +279 +291 +284 +297 +76 +6.5663% +6.8681% +6.6918% +7.0196% +1.7071%
Olsen_Astral_3P 13820 14378 14293 14296 14585
Olsen_Exploris_3P 7255 7582 7340 7479 7941 8155 +900 +573 +815 +676 +214 +12.4052% +7.5574% +11.1035% +9.0386% +2.6949%
SCIEX_3P 8652 9109 8679 8618 9438
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4115 4310 +1065 +921 +899 +992 +195 +32.8197% +27.1762% +26.3559% +29.8975% +4.7388%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4006 4264 +1010 +831 +973 +830 +258 +31.0387% +24.2062% +29.5655% +24.1701% +6.4403%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3337 3786 +1336 +1390 +1336 +1389 +449 +54.5306% +58.0134% +54.5306% +57.9474% +13.4552%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3456 3684 +1176 +1248 +1050 +1042 +228 +46.8900% +51.2315% +39.8633% +39.4398% +6.5972%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6011 6249 +670 +593 +745 +703 +238 +12.0093% +10.4844% +13.5356% +12.6758% +3.9594%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5220 5428 +707 +590 +645 +617 +208 +14.9756% +12.1951% +13.4853% +12.8248% +3.9847%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6134 6449 +838 +794 +853 +896 +315 +14.9349% +14.0407% +15.2430% +16.1354% +5.1353%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6326 6663 +817 +714 +820 +858 +337 +13.9754% +12.0020% +14.0339% +14.7804% +5.3272%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1985 2117 +825 +693 +711 +829 +132 +63.8545% +48.6657% +50.5690% +64.3634% +6.6499%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2003 2307 +739 +647 +549 +434 +304 +47.1301% +38.9759% +31.2287% +23.1714% +15.1772%
SCP_Astral_250pg_3ms 307 8 350 283 1162 1183 +876 +1175 +833 +900 +21 +285.3420% +14687.5000% +238% +318.0212% +1.8072%
SCP_Astral_250pg_6ms 637 756 751 766 1745 1715 +1078 +959 +964 +949 -30 +169.2308% +126.8519% +128.3622% +123.8903% -1.7192%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2853 2937 +730 +662 +768 +707 +84 +33.0766% +29.0989% +35.4080% +31.7040% +2.9443%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2975 3074 +671 +686 +597 +535 +99 +27.9234% +28.7270% +24.1017% +21.0713% +3.3277%
SCP_Astral_500pg_3ms 525 902 828 2072 2205 +1680 +1303 +1377 +133 +320% +144.4568% +166.3043% +6.4189%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2624 2916 +1598 +1469 +1430 +1481 +292 +121.2443% +101.5204% +96.2315% +103.2056% +11.1280%
SCP_Astral_MBR 4708 4720 4712 4715 5024 5317 +609 +597 +605 +602 +293 +12.9354% +12.6483% +12.8396% +12.7678% +5.8320%
Seer_Astral_45 5802 6297 6122 6133 6231
Seer_Astral_single 4685 4700 4632 5060 5259 +574 +559 +627 +199 +12.2519% +11.8936% +13.5363% +3.9328%
YEAST_KO_Astral 4565 4795 4676 4673 4737
EWZ_2P_MBR_Exploris 7041 7234 7446 +405 +212 +5.7520% +2.9306%
EWZ_2P_MBR_Exploris_Human 6167 6252 6355 +188 +103 +3.0485% +1.6475%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7138 7433 +546 +295 +7.9280% +4.1328%
MacCoss_Eclipse_Normalization_noNorm 5804 6247 6480 +676 +233 +11.6471% +3.7298%
MacCoss_Eclipse_Normalization_yesNorm 5804 6247 6480 +676 +233 +11.6471% +3.7298%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 604890
KEAP1KO_Eclipse 90611 91948 +1337
MTAC_3P_Alternating 65364 66610 +1246
MTAC_3P_Standard 65728 66944 +1216
MTAC_Yeast_Alternating_3min 12579 12679 +100
MTAC_Yeast_Alternating_5min 12857 13040 +183
MTAC_Yeast_Standard_3min 12560 12671 +111
MTAC_Yeast_Standard_5min 12943 13148 +205
Olsen_Astral_3P 238278
Olsen_Exploris_3P 156819 159845 +3026
SCIEX_3P 73546
SCP_Astral_1000pg_12ms 11409 11849 +440
SCP_Astral_1000pg_24ms 11204 11768 +564
SCP_Astral_1000pg_3ms 9020 9958 +938
SCP_Astral_1000pg_6ms 6450 6829 +379
SCP_Astral_10ng_12ms 17249 17862 +613
SCP_Astral_10ng_24ms 14758 15336 +578
SCP_Astral_10ng_3ms 17484 18280 +796
SCP_Astral_10ng_6ms 18141 18917 +776
SCP_Astral_250pg_12ms 5202 5638 +436
SCP_Astral_250pg_24ms 5557 6127 +570
SCP_Astral_250pg_3ms 2770 2837 +67
SCP_Astral_250pg_6ms 4489 4493 +4
SCP_Astral_500pg_12ms 7729 7961 +232
SCP_Astral_500pg_24ms 8124 8373 +249
SCP_Astral_500pg_3ms 5272 5599 +327
SCP_Astral_500pg_6ms 7098 7763 +665
SCP_Astral_MBR 20564 21657 +1093
Seer_Astral_45 233431
Seer_Astral_single 5060 5259 +199
YEAST_KO_Astral 1341718
EWZ_2P_MBR_Exploris 247728 251866 +4138
EWZ_2P_MBR_Exploris_Human 115546 117199 +1653
EWZ_2P_MBR_Exploris_YeastHuman 131734 134633 +2899
MacCoss_Eclipse_Normalization_noNorm 187457 194934 +7477
MacCoss_Eclipse_Normalization_yesNorm 187457 194934 +7477

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0006 -0.0005 +0.0006 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0009 -0.0003 -0.0002
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0012 -0.0001 +0.0004 -0.0000 +0.0009 +0.0006 +0.0010
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0015 -0.0007 +0.0006 -0.0012 -0.0001 +0.0000 +0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0013 -0.0016 -0.0001 +0.0003 +0.0010 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0010 -0.0006 +0.0003 +0.0004 +0.0005 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0021 -0.0019 +0.0000 -0.0005 -0.0007 +0.0001 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0006 -0.0005 +0.0005 +0.0014 +0.0019 +0.0000
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 0.0004 -0.0002 +0.0005
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0010 -0.0006 -0.0005 -0.0009 +0.0005 -0.0011 -0.0017
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0021 -0.0013 +0.0010 +0.0016 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0019 -0.0012 +0.0042 +0.0021 +0.0020 +0.0035 -0.0031
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0005 0.0002 +0.0032 +0.0049 +0.0031 +0.0040 +0.0007
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0002 -0.0015 -0.0012 -0.0004 +0.0021 +0.0011 -0.0013
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0010 -0.0006 +0.0016 +0.0011 +0.0018 +0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0003 -0.0011 +0.0010 -0.0020 +0.0004 +0.0002 -0.0014
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0002 -0.0008 +0.0017 +0.0019 +0.0011 +0.0010 -0.0006
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 0.0005 -0.0006 +0.0002 -0.0007 +0.0015 +0.0006 -0.0011
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0035 0.0003 +0.0042 +0.0043 +0.0000 +0.0055 -0.0032
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0000 0.0003 +0.0005 +0.0014 +0.0027 +0.0034 +0.0003
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0040 0.0036 +0.0105 +0.0036 -0.0004
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0012 -0.0002 +0.0049 +0.0024 +0.0047 -0.0015
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0001 0.0001 +0.0022 +0.0011 +0.0028 +0.0027 -0.0000
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0015 0.0018 +0.0031 +0.0042 +0.0030 +0.0029 +0.0003
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0030 0.0013 +0.0026 +0.0036 +0.0048 -0.0017
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0024 0.0004 +0.0035 +0.0037 +0.0019 -0.0020
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 0.0001 +0.0027 +0.0020 +0.0015 +0.0023 +0.0009
Seer_Astral_45_Entrapment -0.0023 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0006 +0.0028 +0.0005
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0026 0.0004 -0.0017 +0.0009 -0.0021
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0026 -0.0018 +0.0011 +0.0008
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0041 -0.0035 -0.0025 -0.0024 -0.0041 -0.0043 +0.0006
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0031 -0.0025 -0.0012 +0.0000 +0.0004 +0.0001 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0028 +0.0038 +0.0025 +0.0020 +0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0009 -0.0025 +0.0016 +0.0014 +0.0024 +0.0009 -0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0033 -0.0042 +0.0016 +0.0006 -0.0022 -0.0014 -0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0016 +0.0020 +0.0029 +0.0040 +0.0025
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0043 -0.0024 -0.0021 +0.0019
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0023
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0022 +0.0007 -0.0020 +0.0007 -0.0013 -0.0017
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0027
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0022 -0.0010 +0.0039 +0.0032 +0.0032 +0.0012
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0060 -0.0056 +0.0014 +0.0002 +0.0014 +0.0014 +0.0004
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0016 -0.0003 +0.0056 +0.0056 +0.0069 +0.0069 -0.0019
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0007 -0.0024 -0.0006 +0.0026 +0.0019 +0.0021 -0.0017
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0065 -0.0054 +0.0000 -0.0014 -0.0000 +0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0035 -0.0036 -0.0004 -0.0013 -0.0020 +0.0009 -0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0006 -0.0037 -0.0000 +0.0036 +0.0029 +0.0024 -0.0030
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0055 -0.0001 -0.0036 -0.0002 -0.0009 -0.0019
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0011 0.0005 +0.0058 +0.0082 +0.0040 +0.0069 -0.0006
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0011 -0.0005 +0.0036 +0.0037 +0.0021 +0.0008 -0.0016
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0117 0.0000 +0.0028 +0.0000 +0.0085 +0.0000 -0.0117
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0046 0.0072 +0.0171 +0.0139 +0.0156 +0.0160 +0.0026
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0032 0.0057 +0.0093 +0.0096 +0.0043 +0.0077 +0.0025
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0000 -0.0008 +0.0012 -0.0007 +0.0044 +0.0054 -0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0024 -0.0030 +0.0012 -0.0100 -0.0050 -0.0029 -0.0054
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0018 0.0017 +0.0062 +0.0062 +0.0025 +0.0073 -0.0001
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0002 -0.0031 +0.0029 -0.0001 -0.0005 +0.0019 -0.0029
Seer_Astral_45_Entrapment -0.0049 -0.0013
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0024 +0.0098 +0.0004
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0003 0.0003 +0.0016 +0.0007
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0005 -0.0004 -0.0002 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0005 -0.0001 +0.0001 -0.0003 +0.0001 +0.0000 +0.0005
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0004 +0.0005 -0.0006 -0.0000 -0.0001 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0009 -0.0011 -0.0001 +0.0002 +0.0003 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0007 -0.0006 -0.0002 +0.0002 +0.0004 +0.0002 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0015 -0.0012 -0.0004 -0.0005 -0.0004 -0.0001 +0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0004 -0.0004 +0.0004 +0.0006 +0.0011 -0.0000
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0006 +0.0003 +0.0004
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0010 0.0000 +0.0005 -0.0005 +0.0007 +0.0001 -0.0010
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0012 -0.0010 +0.0006 +0.0020 +0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 0.0007 -0.0010 +0.0036 +0.0018 +0.0021 +0.0027 -0.0017
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0006 0.0000 +0.0020 +0.0030 +0.0026 +0.0026 +0.0006
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0001 -0.0009 -0.0011 -0.0003 +0.0018 +0.0015 -0.0010
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 -0.0006 +0.0011 +0.0004 +0.0010 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 0.0002 -0.0012 +0.0002 -0.0015 +0.0000 -0.0004 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0002 -0.0005 +0.0015 +0.0016 +0.0011 +0.0010 -0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0000 -0.0009 -0.0004 -0.0011 +0.0003 -0.0001 -0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0021 0.0013 +0.0043 +0.0039 +0.0015 +0.0044 -0.0009
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0006 0.0007 +0.0014 +0.0015 +0.0020 +0.0021 +0.0013
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0036 0.0032 +0.0091 +0.0032 -0.0005
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0020 0.0010 +0.0047 +0.0032 +0.0040 -0.0010
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0004 0.0008 +0.0026 +0.0011 +0.0028 +0.0021 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0016 0.0020 +0.0036 +0.0037 +0.0038 +0.0037 +0.0004
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0033 0.0017 -0.0002 +0.0020 +0.0032 -0.0016
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0017 -0.0001 +0.0025 +0.0018 +0.0009 -0.0018
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0001 -0.0003 +0.0015 +0.0012 +0.0005 +0.0010 -0.0002
Seer_Astral_45_Entrapment -0.0011 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0006 +0.0028 +0.0005
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0007
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0016 0.0006 +0.0018 -0.0010
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0014 +0.0003 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0021 -0.0020 -0.0019 -0.0018 -0.0023 -0.0022 +0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0013 -0.0015 -0.0006 -0.0001 +0.0006 +0.0004 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0006 +0.0030 +0.0027 +0.0023 +0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0009 +0.0028 +0.0012 +0.0015 +0.0004 -0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0023 +0.0015 +0.0012 -0.0009 -0.0007 -0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0016 +0.0007 +0.0011 +0.0022 +0.0006
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0022 -0.0009 -0.0004 +0.0013
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0016
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0008 -0.0016 +0.0011 -0.0022 +0.0001 +0.0000 -0.0008
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0013 0.0002 +0.0039 +0.0025 +0.0034 +0.0015
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0045 -0.0041 +0.0008 +0.0015 +0.0017 +0.0003 +0.0004
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0005 -0.0010 +0.0034 +0.0023 +0.0030 +0.0021 -0.0016
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0005 -0.0016 +0.0008 +0.0019 +0.0024 +0.0024 -0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0037 +0.0010 -0.0007 +0.0004 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0030 +0.0002 -0.0016 -0.0016 -0.0005 +0.0000
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0015 -0.0025 -0.0004 +0.0021 +0.0013 +0.0008 -0.0010
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0041 -0.0002 -0.0022 -0.0003 -0.0011 -0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0017 0.0015 +0.0053 +0.0056 +0.0034 +0.0045 -0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 0.0002 -0.0010 +0.0004 +0.0022 -0.0006 -0.0009 -0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0100 0.0008 +0.0069 +0.0090 +0.0055 +0.0008 -0.0092
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0018 0.0038 +0.0138 +0.0106 +0.0093 +0.0086 +0.0020
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0018 0.0033 +0.0073 +0.0069 +0.0041 +0.0061 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0003 -0.0003 +0.0017 -0.0003 +0.0040 +0.0042 +0.0000
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0000 -0.0010 +0.0022 -0.0077 -0.0038 -0.0014 -0.0011
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0023 0.0006 +0.0026 +0.0028 -0.0003 +0.0034 -0.0017
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0005 -0.0020 +0.0003 -0.0003 +0.0002 +0.0008 -0.0016
Seer_Astral_45_Entrapment -0.0029 -0.0000
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0028 +0.0102 +0.0008
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0024

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 6613 -933 -25328 -7546

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 174 107 -664 -67

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0263 0 -0.0316 -0.0263

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 450 26 -818 -424

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -61 -38 -228 +23

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 13 +4 +1 +1 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 12 +4 +0 +1 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 14 +3 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 1 +0 +1 -1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1652 0.1655 +0.0196 +0.0234 +0.0255 +0.0281 +0.0003
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1560 0.1566 +0.0173 +0.0204 +0.0215 +0.0242 +0.0006
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1615 0.1596 +0.0140 +0.0171 +0.0188 -0.0020
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1503 0.1477 -0.0054 +0.0068 +0.0101 +0.0121 -0.0026
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1710 0.1719 +0.0021 +0.0080 +0.0103 +0.0120 +0.0008
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1463 0.1488 -0.0015 +0.0122 +0.0151 +0.0166 +0.0026
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1533 +0.0053 +0.0034 +0.0038 +0.0028 +0.0002
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1542
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5939 0.5776 -0.0093 -0.0163
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2052 0.1805 +0.0088 -0.0248

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0842 +0.0079 +0.0104 +0.0116 +0.0122 -0.0001
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0804 +0.0080 +0.0101 +0.0104 +0.0116 -0.0001
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0751 0.0741 +0.0068 +0.0081 +0.0083 -0.0010
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0648 0.0643 -0.0135 +0.0040 +0.0050 +0.0055 -0.0005
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0800 0.0798 +0.0005 +0.0041 +0.0045 +0.0025 -0.0003
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0636 0.0637 -0.0133 +0.0070 +0.0068 +0.0069 +0.0001
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0985 0.0994 -0.0035 -0.0026 -0.0043 -0.0034 +0.0008
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1017
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5812 0.5757 -0.0124 -0.0055
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1380 0.1335 +0.0102 -0.0045

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 0.0008 -0.0059 -0.0020 +0.0070 +0.0012 -0.0769 +0.0051
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0137 -0.0160 -0.0076 +0.0055 -0.0002 -0.0272 +0.0023
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0092 -0.0067 +0.0007 -0.0023 -0.0001 +0.0083 -0.0025
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0754 -0.0723 +0.0012 -0.0008 +0.0020 -0.0514 -0.0031
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0717 -0.0716 -0.0054 -0.0006 -0.0003 -0.0004 -0.0001
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0571 -0.0573 -0.0080 +0.0050 -0.0016 +0.0281 +0.0002
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0453 +0.0114 +0.0329 -0.0052 -0.0508
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1858 +0.0115 +0.0151 +0.0011 -0.0433
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1736 -0.0082 +0.0282 -0.0195 +0.1538
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0286 +0.0067 +0.0305 +0.0014 -0.0136
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3292 +0.0081 +0.0093 -0.0002 -0.0137
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1211 -0.0024 -0.0402 -0.0016 +0.0876
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2195 +0.0015 +0.0038 -0.0038 -0.0083
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2343 +0.0262 -0.0191 +0.0011 +0.0320
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1334 0.1356 -0.0059 -0.0059 +0.0211 -0.1031 +0.0022
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0845 -0.0841 +0.0062 +0.0047 -0.0191 +0.0240 -0.0004
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2000 0.1994 +0.0183 -0.0240 +0.0287 -0.0785 -0.0006
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1045 0.1039 +0.0048 -0.0054 -0.0067 +0.0163 -0.0006
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0481 +0.0009 +0.0001 -0.0089 +0.0026 -0.0001
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2158 0.2153 +0.0051 -0.0017 +0.0004 +0.0122 -0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1446 0.1439 -0.0032 -0.0062 -0.0160 +0.1222 -0.0008
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0785 -0.0794 +0.0043 -0.0045 -0.0054 -0.0235 +0.0009
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0507 0.0441 +0.0169 -0.0238 +0.0355 -0.0458 -0.0066
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0385 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0065 -0.0031 +0.0125 +0.0006 -0.0615
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0309 -0.0051 -0.0071 +0.0012 +0.0273
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0760 +0.0119 -0.0026 -0.0002 +0.0335
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0249
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0162 -0.0331 +0.0073 +0.0004 -0.0068
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0563
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1548 -0.0356 -0.0145 +0.0024 +0.0961
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1053 -0.0468 -0.0064 -0.0010 +0.0685

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0010 0.0003 +0.0009 +0.0076 -0.0005 -0.0723 -0.0008
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0150 -0.0160 -0.0089 +0.0045 +0.0004 -0.0261 +0.0010
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0001 0.0035 +0.0054 -0.0044 +0.0010 -0.0034 +0.0033
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0770 -0.0734 +0.0013 +0.0005 -0.0055 -0.0436 -0.0036
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0699 -0.0696 -0.0060 -0.0005 -0.0005 -0.0002 -0.0003
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0489 -0.0492 -0.0084 +0.0078 -0.0007 +0.0180 +0.0003
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0544 +0.0142 +0.0365 -0.0057 -0.0359
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1346 +0.0050 +0.0043 -0.0072 -0.0288
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1874 -0.0338 -0.0246 +0.0154 +0.1702
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0229 +0.0064 +0.0290 +0.0021 -0.0296
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3048 +0.0072 +0.0066 -0.0010 -0.0008
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1116 +0.0002 -0.0402 -0.0012 +0.0829
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1028 +0.0124 -0.0135 -0.0021 +0.0517
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1962 -0.0003 +0.0009 -0.0042 +0.0005
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1989 +0.0289 -0.0188 +0.0012 +0.0186
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1590 0.1550 -0.0077 -0.0028 +0.0144 -0.0621 -0.0040
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0790 -0.0798 +0.0048 +0.0016 -0.0170 +0.0233 +0.0008
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2372 0.2303 +0.0504 -0.0481 +0.0073 -0.0282 -0.0069
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0985 0.0992 +0.0031 -0.0032 -0.0081 +0.0226 +0.0007
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0444 -0.0440 +0.0011 -0.0008 -0.0084 +0.0023 -0.0005
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2255 0.2254 +0.0036 -0.0008 +0.0016 +0.0222 -0.0001
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1259 0.1376 +0.0005 -0.0096 -0.0297 +0.1213 +0.0117
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0774 -0.0797 +0.0056 -0.0034 -0.0033 -0.0311 +0.0023
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0658 0.0453 +0.0405 -0.0089 +0.0322 -0.0515 -0.0204
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0464 +0.0258 +0.0029 -0.0003 -0.0236
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0237 -0.0049 +0.0142 +0.0054 -0.0441
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0289 -0.0001 -0.0108 +0.0000 +0.0248
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0809 +0.0137 -0.0048 +0.0001 +0.0402
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0984 -0.0232 +0.0027 +0.0012 +0.0358
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0184 -0.0350 +0.0076 +0.0002 -0.0033
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0658 +0.0131 -0.0109 +0.0003 +0.0542
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1615 -0.0435 -0.0160 +0.0023 +0.1036
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.1007 -0.0508 -0.0078 +0.0009 +0.0564

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1266 0.1262 +0.0343 +0.0202 -0.0086 -0.1812 -0.0004
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1144 0.1130 +0.0169 -0.0058 +0.0004 -0.0955 -0.0014
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1190 0.1197 +0.0117 -0.0078 +0.0011 -0.1419 +0.0008
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1431 0.1326 +0.0441 -0.0007 -0.0136 -0.1549 -0.0105
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1266 0.1259 +0.0164 -0.0031 -0.0002 -0.0926 -0.0007
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1285 0.1290 +0.0170 -0.0063 +0.0017 -0.1395 +0.0006
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1525 +0.0354 +0.0384 -0.0420 -0.4231
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2166 +0.0422 -0.0321 -0.0167 -0.1334
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3611 +0.2175 -0.0279 -0.1166 -0.8801
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1400 +0.0427 +0.0074 -0.0036 -0.1164
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2295 +0.0473 +0.0030 -0.0078 -0.1061
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1770 +0.0549 +0.0262 -0.0056 -0.2031
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1429 +0.0358 +0.0129 -0.0110 -0.1886
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1910 +0.0274 +0.0045 -0.0018 -0.0944
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1946 +0.0778 +0.0001 -0.0169 -0.3438
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1875 0.1946 +0.0445 +0.0761 -0.1281 -0.3834 +0.0072
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0485 0.0477 -0.0103 +0.0134 -0.0147 -0.1027 -0.0009
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3018 0.2992 -0.0030 +0.1483 +0.0078 -0.6557 -0.0026
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1851 0.1847 +0.0037 +0.0045 +0.0051 -0.1654 -0.0004
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0430 0.0424 +0.0676 -0.0087 -0.0168 -0.1087 -0.0006
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1860 0.1837 +0.0316 +0.0062 -0.0049 -0.1493 -0.0023
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2052 0.1971 -0.0093 +0.0378 -0.0706 -0.3716 -0.0081
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0596 0.0579 +0.0977 -0.0155 +0.0159 -0.1882 -0.0018
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4715 0.3499 +0.0737 +0.1982 -0.0827 -0.8036 -0.1216
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1056 +0.0321 -0.0450 -0.0051 -0.3770
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1288 +0.0200 -0.0293 -0.0344 -0.4130
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0783 +0.0068 -0.0387 -0.0080 -0.0284
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0871 +0.0190 -0.0584 -0.0028 -0.0649
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0977 +0.0281 -0.0478 -0.0031 -0.0967
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0885 +0.0273 -0.0601 -0.0037 -0.0455
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1008 +0.0130 -0.0614 -0.0008 -0.0842
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1632 +0.0619 -0.0455 -0.0143 -0.4108
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1083 +0.0688 -0.0494 -0.0103 -0.3888

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0570 0.0551 +0.0149 -0.0182 -0.0054 -0.0638 -0.0019
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0350 0.0342 +0.0035 +0.0005 +0.0043 -0.0465 -0.0008
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0396 0.0470 -0.0157 -0.0104 +0.0083 -0.0726 +0.0074
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0483 0.0461 -0.0042 +0.0002 -0.0084 -0.0713 -0.0023
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0383 0.0365 +0.0032 -0.0030 +0.0035 -0.0334 -0.0018
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0521 0.0558 +0.0000 +0.0073 -0.0081 -0.0733 +0.0036
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0444 +0.0402 -0.0136 +0.0467 -0.2213
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0756 +0.0316 -0.0208 -0.0112 -0.0330
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.0864 +0.1306 -0.0136 -0.0647 -0.3064
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0220 +0.0032 +0.0034 -0.0021 -0.0245
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0454 +0.0110 -0.0047 +0.0013 -0.0171
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0271 +0.0055 -0.0000 +0.0038 -0.0350
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0294 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0097
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0363 +0.0296 -0.0022 -0.0025 -0.0845
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0480 0.0492 +0.0146 +0.0452 -0.0355 -0.1797 +0.0013
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0174 0.0183 -0.0057 -0.0062 -0.0031 -0.0312 +0.0009
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0995 0.0692 -0.1294 +0.1626 +0.0090 -0.4010 -0.0303
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0336 0.0346 -0.0046 +0.0074 +0.0016 -0.0355 +0.0010
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0094 0.0090 +0.0109 -0.0066 +0.0090 -0.0340 -0.0004
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0353 0.0352 -0.0053 +0.0093 +0.0025 -0.0471 -0.0002
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0632 0.0737 -0.0166 +0.0170 -0.0166 -0.1543 +0.0105
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0192 0.0186 +0.0068 -0.0006 -0.0039 -0.0545 -0.0006
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1308 0.1270 -0.0891 -0.0032 -0.0082 -0.2996 -0.0038
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0565 +0.0682 -0.0593 -0.0056 -0.1658
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0758 +0.0668 -0.0849 -0.0031 -0.1677
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0332 +0.0113 -0.0357 +0.0198 -0.0196
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0243 -0.0054 -0.0154 +0.0040 -0.0244
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0262 -0.0011 -0.0225 +0.0112 -0.0346
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0243 +0.0094 -0.0181 -0.0013 -0.0214
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0342 -0.0134 -0.0199 -0.0090 -0.0333
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0576 +0.0271 -0.0671 +0.0055 -0.2016
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0403 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 118.1000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 13.5100 17.7500 -6.3200 +0.4300 -2.1200 +0.6200 +4.2400 -26.2568% +2.4827% -10.6694% +3.6194% +31.3842%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.4300 10.9000 -1.8500 +1.8300 +2.5400 +1.6100 +3.4700 -14.5098% +20.1764% +30.3828% +17.3305% +46.7026%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.2800 9.3200 -2.9900 +0.3600 -0.3400 -1.4900 +2.0400 -24.2892% +4.0179% -3.5197% -13.7835% +28.0220%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.7800 5.0600 +0.8300 +0.6500 +0.1200 +0.2800 +19.6217% +14.7392% +2.4291% +5.8577%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4000 7.3400 +1.9600 +2.9600 +2.5900 +2.8000 +1.9400 +36.4312% +67.5799% +54.5263% +61.6740% +35.9259%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.5600 5.1800 -0.2500 +1.0400 +0.7400 +0.5200 +0.6200 -4.6041% +25.1208% +16.6667% +11.1588% +13.5965%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9700 5.3700 -0.1800 +0.9500 +0.8400 +0.9100 +0.4000 -3.2432% +21.4932% +18.5430% +20.4036% +8.0483%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 48.4900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 16.6200 16.9500 -10.7100 -2.8100 -1.3700 -2.3300 +0.3300 -38.7202% -14.2206% -7.4782% -12.0851% +1.9856%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.8600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.0300 6.4900 +0.7000 +1.9000 +1.8400 +2.4000 +1.4600 +12.0898% +41.3943% +39.5699% +58.6797% +29.0258%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4200 5.2800 -0.9800 +0.8800 -0.6000 -0.1400 -15.6550% +20.0000% -10.2041% -2.5830%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.5400 11.2900 +6.7700 +7.5600 +6.4900 +7.6500 +6.7500 +149.7788% +202.6810% +135.2083% +210.1648% +148.6784%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.2100 4.3400 -1.4000 +0.8300 +0.4200 +0.9000 +0.1300 -24.3902% +23.6467% +10.7143% +26.1628% +3.0879%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.2500 6.2000 -0.8700 +0.6700 +0.6900 +0.4600 +0.9500 -12.3055% +12.1157% +12.5227% +8.0139% +18.0952%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.4100 8.1300 +0.5400 +2.4000 +1.9900 +2.5900 +2.7200 +7.1146% +41.8848% +32.4104% +46.7509% +50.2773%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2600 5.8900 -0.5600 +1.2200 +1.5900 +1.4800 +0.6300 -8.6822% +26.1242% +36.9767% +33.5601% +11.9772%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.1400 6.6400 -0.7400 +1.7100 +2.0100 +1.0200 +1.5000 -10.0271% +34.6856% +43.4125% +18.1495% +29.1829%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.7700 4.6000 -0.1400 +0.9400 +1.2100 -0.1700 -2.9536% +25.6831% +35.6932% -3.5639%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.6800 4.9600 -0.3000 +1.1200 +1.2000 +0.2800 -5.7034% +29.1667% +31.9149% +5.9829%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.8300 4.3800 -0.2700 +0.9500 +0.6700 +0.9300 +0.5500 -5.8065% +27.6968% +18.0593% +26.9565% +14.3603%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.6900 4.7700 +0.6000 +1.4800 +1.0800 +1.5000 +0.0800 +14.3885% +44.9848% +29.2683% +45.8716% +1.7058%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2300 4.7200 -0.5600 +1.1900 +1.1200 +1.2300 +0.4900 -10.6061% +33.7110% +31.1111% +35.2436% +11.5839%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.8700 5.1000 -0.4100 +1.2800 +0.9500 +0.2900 +0.2300 -7.4410% +33.5079% +22.8916% +6.0291% +4.7228%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5 6.3900 +1.6600 +2.9300 +2.8200 +1.3900 +35.0951% +84.6821% +78.9916% +27.8000%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.5400 4.9300 +0.2800 +1.3100 +1.2000 +1.1500 +0.3900 +6.0215% +36.1878% +32.1716% +30.4233% +8.5903%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5000 7.5400 -1.5000 +0.9900 +1.4400 +0.0400 -16.5929% +15.1145% +23.6066% +0.5333%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 67.1900
Seer_Astral_single 4.4700 4.1400 5.5800 5.8300 29.0500 +24.5800 +24.9100 +23.4700 +23.2200 +549.8881% +601.6908% +420.6093% +398.2847%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 148
EWZ_2P_MBR_Exploris 26.1800 19.1700 25.8200 -0.3600 +6.6500 -1.3751% +34.6896%
EWZ_2P_MBR_Exploris_Human 12.9100 11.3400 14.4500 +1.5400 +3.1100 +11.9287% +27.4250%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.8500 15.2000 +3.1400 +3.3500 +26.0365% +28.2700%
MacCoss_Eclipse_Normalization_noNorm 27.5100 27.3400 38.6800 +11.1700 +11.3400 +40.6034% +41.4777%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.1700 42.8500 +15.1800 +14.6800 +54.8609% +52.1122%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png