Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6656655
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1292235 1318125 +221631 +11120 +6170 +24584 +25890 +20.2127% +0.8508% +0.4703% +1.9005% +2.0035%
MTAC_3P_Alternating 586322 615762 610710 599881 621395 635263 +48941 +19501 +24553 +35382 +13868 +8.3471% +3.1670% +4.0204% +5.8982% +2.2318%
MTAC_3P_Standard 596590 623022 617574 607435 625424 638611 +42021 +15589 +21037 +31176 +13187 +7.0435% +2.5022% +3.4064% +5.1324% +2.1085%
MTAC_Yeast_Alternating_3min 137548 136839 135560 145706 149226 +11678 +12387 +13666 +3520 +8.4901% +9.0522% +10.0811% +2.4158%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 164379 167313 +11672 +10762 +10804 +12278 +2934 +7.4993% +6.8744% +6.9031% +7.9195% +1.7849%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 148110 151222 +12713 +11837 +11930 +13337 +3112 +9.1785% +8.4923% +8.5647% +9.6726% +2.1011%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 165591 169480 +10518 +10748 +10320 +11558 +3889 +6.6167% +6.7712% +6.4840% +7.3188% +2.3486%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3412790
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1319303 1333028 +310292 +178359 +209155 +148944 +13725 +30.3394% +15.4468% +18.6102% +12.5788% +1.0403%
SCIEX_3P 672242 749525 722698 714454 743897
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 53263 55474 +14592 +13774 +13049 +13374 +2211 +35.6930% +33.0312% +30.7578% +31.7672% +4.1511%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 51247 53969 +12900 +11567 +11946 +12817 +2722 +31.4106% +27.2794% +28.4273% +31.1455% +5.3115%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 42044 44521 +35781 +21406 +21506 +21608 +2477 +409.3936% +92.6065% +93.4434% +94.3045% +5.8914%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 28680 29875 +12940 +12322 +11466 +11527 +1195 +76.4098% +70.1988% +62.2848% +62.8243% +4.1667%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 114502 119753 +19845 +16862 +20770 +21105 +5251 +19.8633% +16.3882% +20.9834% +21.3943% +4.5859%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 85070 89159 +18061 +16431 +17714 +18033 +4089 +25.4030% +22.5924% +24.7939% +25.3536% +4.8066%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 123935 127889 +22185 +21392 +22267 +23455 +3954 +20.9879% +20.0870% +21.0818% +22.4592% +3.1904%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 128906 134052 +18895 +16736 +19730 +20971 +5146 +16.4080% +14.2657% +17.2583% +18.5451% +3.9921%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 18714 19384 +9190 +8578 +8146 +8151 +670 +90.1511% +79.3818% +72.4862% +72.5630% +3.5802%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 20673 21745 +6938 +6312 +5704 +6046 +1072 +46.8562% +40.8994% +35.5589% +38.5120% +5.1855%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 8726 8556 +7295 +6524 +6106 +6170 -170 +578.5091% +321.0630% +249.2245% +258.5918% -1.9482%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16166 16412 +14976 +11629 +10722 +10681 +246 +1042.8969% +243.1319% +188.4359% +186.3724% +1.5217%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 32026 33319 +11609 +11424 +10739 +10856 +1293 +53.4731% +52.1763% +47.5598% +48.3284% +4.0373%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 32256 33904 +8044 +7761 +7644 +8279 +1648 +31.1060% +29.6867% +29.1089% +32.3083% +5.1091%
SCP_Astral_500pg_3ms 3484 6898 6834 19322 21020 +17536 +14122 +14186 +1698 +503.3295% +204.7260% +207.5797% +8.7879%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 28202 29898 +19199 +18424 +17016 +17009 +1696 +179.4467% +160.5717% +132.0913% +131.9652% +6.0138%
SCP_Astral_MBR 92167 93585 91884 90864 108777 113604 +21437 +20019 +21720 +22740 +4827 +23.2589% +21.3912% +23.6385% +25.0264% +4.4375%
Seer_Astral_45 2512737 3124006 3135497 2971207 3001003
Seer_Astral_single 56699 55793 55891 60660 63325 +6626 +7532 +7434 +2665 +11.6863% +13.4999% +13.3009% +4.3933%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17275427
EWZ_2P_MBR_Exploris 1776128 1865977 1898331 +122203 +32354 +6.8803% +1.7339%
EWZ_2P_MBR_Exploris_Human 836809 881569 897035 +60226 +15466 +7.1971% +1.7544%
EWZ_2P_MBR_Exploris_YeastHuman 914924 977795 997413 +82489 +19618 +9.0159% +2.0064%
MacCoss_Eclipse_Normalization_noNorm 2078034 2247711 2304289 +226255 +56578 +10.8879% +2.5171%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2247711 2304289 +226255 +56578 +10.8879% +2.5171%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 107890
KEAP1KO_Eclipse 111504 133619 131359 132031 148329 153871 +42367 +20252 +22512 +21840 +5542 +37.9959% +15.1565% +17.1378% +16.5416% +3.7363%
MTAC_3P_Alternating 108267 117352 114659 114816 123799 127241 +18974 +9889 +12582 +12425 +3442 +17.5252% +8.4268% +10.9734% +10.8217% +2.7803%
MTAC_3P_Standard 110265 118693 115800 116148 124703 128221 +17956 +9528 +12421 +12073 +3518 +16.2844% +8.0274% +10.7263% +10.3945% +2.8211%
MTAC_Yeast_Alternating_3min 48858 49032 48995 55378 56839 +7981 +7807 +7844 +1461 +16.3351% +15.9223% +16.0098% +2.6382%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 61497 63265 +9296 +8190 +7425 +7381 +1768 +17.2247% +14.8706% +13.2969% +13.2077% +2.8749%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 56180 57561 +8940 +7896 +7272 +7101 +1381 +18.3871% +15.8985% +14.4604% +14.0725% +2.4582%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 62196 63960 +8900 +8041 +7253 +7133 +1764 +16.1642% +14.3797% +12.7903% +12.5521% +2.8362%
Olsen_Astral_3P 198770 231103 234505 234149 239695
Olsen_Exploris_3P 51272 58784 55047 58593 72007 74888 +23616 +16104 +19841 +16295 +2881 +46.0602% +27.3952% +36.0437% +27.8105% +4.0010%
SCIEX_3P 82206 93920 87927 87858 102130
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 20401 21473 +7033 +6515 +6224 +5766 +1072 +48.7050% +43.5553% +40.8158% +36.7097% +5.2546%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 19303 20667 +6184 +5602 +5751 +5597 +1364 +42.6983% +37.1855% +38.5559% +37.1400% +7.0663%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 17210 18378 +9638 +9002 +8989 +9014 +1168 +110.2746% +96.0111% +95.7397% +96.2623% +6.7868%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 16380 17281 +8383 +8022 +7497 +7471 +901 +94.2122% +86.6400% +76.6251% +76.1570% +5.5006%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 41662 43807 +8942 +7510 +9465 +9382 +2145 +25.6475% +20.6904% +27.5610% +27.2534% +5.1486%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 31075 33103 +8454 +7637 +7984 +7880 +2028 +34.2975% +29.9890% +31.7847% +31.2413% +6.5261%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 45956 48267 +11579 +10591 +10618 +10846 +2311 +31.5607% +28.1107% +28.2026% +28.9837% +5.0287%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 46670 49504 +9348 +7959 +9461 +9611 +2834 +23.2792% +19.1575% +23.6271% +24.0919% +6.0724%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7634 8103 +4437 +4154 +3894 +3857 +469 +121.0311% +105.1912% +92.5160% +90.8384% +6.1436%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8261 8807 +3508 +3196 +2952 +2741 +546 +66.2012% +56.9595% +50.4184% +45.1863% +6.6094%
SCP_Astral_250pg_3ms 675 721 908 879 4172 4005 +3330 +3284 +3097 +3126 -167 +493.3333% +455.4785% +341.0793% +355.6314% -4.0029%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6891 7019 +5583 +5281 +4874 +4856 +128 +388.7883% +303.8550% +227.2261% +224.5030% +1.8575%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 12669 13404 +5610 +5432 +5152 +4998 +735 +71.9784% +68.1385% +62.4333% +59.4575% +5.8016%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 12395 13120 +3962 +3778 +3749 +3706 +725 +43.2627% +40.4410% +40.0064% +39.3669% +5.8491%
SCP_Astral_500pg_3ms 1846 2600 2586 8323 9219 +7373 +6619 +6633 +896 +399.4041% +254.5769% +256.4965% +10.7653%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 11257 12131 +8257 +7976 +7357 +7326 +874 +213.1389% +191.9615% +154.1056% +152.4662% +7.7641%
SCP_Astral_MBR 24110 24991 24570 24544 30152 31829 +7719 +6838 +7259 +7285 +1677 +32.0158% +27.3619% +29.5442% +29.6814% +5.5618%
Seer_Astral_45 69584 90103 87204 87620 91412
Seer_Astral_single 56699 55793 55891 60660 63325 +6626 +7532 +7434 +2665 +11.6863% +13.4999% +13.3009% +4.3933%
YEAST_KO_Astral 66823 87888 87428 86498 85126
EWZ_2P_MBR_Exploris 55271 61651 64890 +9619 +3239 +17.4033% +5.2538%
EWZ_2P_MBR_Exploris_Human 48465 53608 56099 +7634 +2491 +15.7516% +4.6467%
EWZ_2P_MBR_Exploris_YeastHuman 51246 57183 60201 +8955 +3018 +17.4745% +5.2778%
MacCoss_Eclipse_Normalization_noNorm 73278 79190 82147 +8869 +2957 +12.1032% +3.7341%
MacCoss_Eclipse_Normalization_yesNorm 73278 79190 82147 +8869 +2957 +12.1032% +3.7341%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 604895
KEAP1KO_Eclipse 87920 92888 93982 93441 90649 91922 +4002 -966 -2060 -1519 +1273 +4.5519% -1.0400% -2.1919% -1.6256% +1.4043%
MTAC_3P_Alternating 63773 63974 63611 63015 65375 65962 +2189 +1988 +2351 +2947 +587 +3.4325% +3.1075% +3.6959% +4.6767% +0.8979%
MTAC_3P_Standard 64317 64464 64219 63385 65743 66629 +2312 +2165 +2410 +3244 +886 +3.5947% +3.3585% +3.7528% +5.1179% +1.3477%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12589 12708 +641 +738 +768 +119 +5.3120% +6.1654% +6.4322% +0.9453%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12877 12974 +542 +503 +612 +646 +97 +4.3597% +4.0334% +4.9507% +5.2401% +0.7533%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12568 12647 +639 +600 +687 +679 +79 +5.3215% +4.9805% +5.7441% +5.6735% +0.6286%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12961 13146 +585 +681 +669 +736 +185 +4.6573% +5.4633% +5.3619% +5.9307% +1.4274%
Olsen_Astral_3P 236395 245756 242430 240719 238322
Olsen_Exploris_3P 146224 153534 153990 155827 156821 159412 +13188 +5878 +5422 +3585 +2591 +9.0190% +3.8285% +3.5210% +2.3006% +1.6522%
SCIEX_3P 70810 74366 72157 71550 73551
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 11410 11873 +2710 +2345 +2288 +2539 +463 +29.5755% +24.6117% +23.8706% +27.2016% +4.0578%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11205 11638 +2340 +1877 +2226 +2085 +433 +25.1667% +19.2296% +23.6507% +21.8256% +3.8643%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 9023 9936 +7486 +3852 +3689 +3820 +913 +305.5510% +63.3136% +59.0523% +62.4591% +10.1186%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6458 6742 +2039 +2154 +1784 +1819 +284 +43.3553% +46.9486% +35.9823% +36.9490% +4.3976%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17253 17677 +1487 +1397 +1652 +1622 +424 +9.1847% +8.5811% +10.3089% +10.1028% +2.4575%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14759 15271 +1672 +1430 +1583 +1600 +512 +12.2950% +10.3316% +11.5649% +11.7036% +3.4691%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 17489 18084 +1832 +1808 +1967 +2159 +595 +11.2725% +11.1084% +12.2045% +13.5573% +3.4021%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18141 18735 +1718 +1557 +1822 +1990 +594 +10.0958% +9.0639% +10.7728% +11.8841% +3.2744%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5202 5580 +1933 +1667 +1716 +2041 +378 +53.0025% +42.6016% +44.4099% +57.6717% +7.2664%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5561 5888 +1588 +1285 +1091 +911 +327 +36.9302% +27.9166% +22.7434% +18.3042% +5.8802%
SCP_Astral_250pg_3ms 576 22 936 741 2775 3013 +2437 +2991 +2077 +2272 +238 +423.0903% +13595.4545% +221.9017% +306.6127% +8.5766%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4489 4615 +3978 +2535 +2586 +2569 +126 +624.4898% +121.8750% +127.4519% +125.5621% +2.8069%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7731 7974 +1729 +1628 +1958 +1847 +243 +27.6861% +25.6540% +32.5465% +30.1453% +3.1432%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8125 8324 +1602 +1595 +1312 +1301 +199 +23.8322% +23.7034% +18.7108% +18.5248% +2.4492%
SCP_Astral_500pg_3ms 982 2365 2177 5275 5591 +4609 +3226 +3414 +316 +469.3483% +136.4059% +156.8213% +5.9905%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7102 7554 +3846 +3547 +3509 +3636 +452 +103.7217% +88.5201% +86.7491% +92.8025% +6.3644%
SCP_Astral_MBR 20165 20129 20074 19793 20566 21274 +1109 +1145 +1200 +1481 +708 +5.4996% +5.6883% +5.9779% +7.4824% +3.4426%
Seer_Astral_45 225377 241455 241952 237727 233436
Seer_Astral_single 4685 4700 4632 5060 5187 +502 +487 +555 +127 +10.7150% +10.3617% +11.9819% +2.5099%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1341725
EWZ_2P_MBR_Exploris 245259 247748 252317 +7058 +4569 +2.8778% +1.8442%
EWZ_2P_MBR_Exploris_Human 115447 115558 117495 +2048 +1937 +1.7740% +1.6762%
EWZ_2P_MBR_Exploris_YeastHuman 128968 131740 135039 +6071 +3299 +4.7074% +2.5042%
MacCoss_Eclipse_Normalization_noNorm 178174 187459 192929 +14755 +5470 +8.2812% +2.9180%
MacCoss_Eclipse_Normalization_yesNorm 178174 187459 192929 +14755 +5470 +8.2812% +2.9180%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6423
KEAP1KO_Eclipse 7845 8175 8155 8203 8439 8530 +685 +355 +375 +327 +91 +8.7317% +4.3425% +4.5984% +3.9863% +1.0783%
MTAC_3P_Alternating 11361 11494 11351 11338 12050 12175 +814 +681 +824 +837 +125 +7.1649% +5.9248% +7.2593% +7.3823% +1.0373%
MTAC_3P_Standard 11473 11560 11477 11396 12069 12262 +789 +702 +785 +866 +193 +6.8770% +6.0727% +6.8398% +7.5992% +1.5991%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4390 4425 +297 +333 +325 +35 +7.1948% +8.1378% +7.9268% +0.7973%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4457 4494 +279 +246 +276 +280 +37 +6.6192% +5.7910% +6.5434% +6.6445% +0.8302%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4358 4365 +290 +231 +275 +268 +7 +7.1166% +5.5878% +6.7237% +6.5414% +0.1606%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4452 4531 +282 +294 +287 +300 +79 +6.6369% +6.9389% +6.7625% +7.0905% +1.7745%
Olsen_Astral_3P 13820 14378 14293 14296 14585
Olsen_Exploris_3P 7255 7582 7340 7479 7941 8134 +879 +552 +794 +655 +193 +12.1158% +7.2804% +10.8174% +8.7579% +2.4304%
SCIEX_3P 8652 9109 8679 8618 9438
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4115 4301 +1056 +912 +890 +983 +186 +32.5424% +26.9106% +26.0921% +29.6263% +4.5200%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4006 4225 +971 +792 +934 +791 +219 +29.8402% +23.0702% +28.3804% +23.0344% +5.4668%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3337 3758 +1308 +1362 +1308 +1361 +421 +53.3878% +56.8447% +53.3878% +56.7793% +12.6161%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3456 3650 +1142 +1214 +1016 +1008 +194 +45.5343% +49.8358% +38.5725% +38.1529% +5.6134%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6011 6175 +596 +519 +671 +629 +164 +10.6829% +9.1761% +12.1911% +11.3415% +2.7283%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5220 5404 +683 +566 +621 +593 +184 +14.4673% +11.6990% +12.9835% +12.3259% +3.5249%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6134 6407 +796 +752 +811 +854 +273 +14.1864% +13.2980% +14.4925% +15.3791% +4.4506%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6326 6584 +738 +635 +741 +779 +258 +12.6240% +10.6741% +12.6818% +13.4195% +4.0784%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1985 2120 +828 +696 +714 +832 +135 +64.0867% +48.8764% +50.7824% +64.5963% +6.8010%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2003 2178 +610 +518 +420 +305 +175 +38.9031% +31.2048% +23.8908% +16.2840% +8.7369%
SCP_Astral_250pg_3ms 307 8 350 283 1162 1320 +1013 +1312 +970 +1037 +158 +329.9674% +16400% +277.1429% +366.4311% +13.5972%
SCP_Astral_250pg_6ms 637 756 751 766 1745 1771 +1134 +1015 +1020 +1005 +26 +178.0220% +134.2593% +135.8189% +131.2010% +1.4900%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2853 2963 +756 +688 +794 +733 +110 +34.2546% +30.2418% +36.6067% +32.8700% +3.8556%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2975 3036 +633 +648 +559 +497 +61 +26.3421% +27.1357% +22.5676% +19.5746% +2.0504%
SCP_Astral_500pg_3ms 525 902 828 2072 2200 +1675 +1298 +1372 +128 +319.0476% +143.9024% +165.7005% +6.1776%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2624 2796 +1478 +1349 +1310 +1361 +172 +112.1396% +93.2274% +88.1561% +94.8432% +6.5549%
SCP_Astral_MBR 4708 4720 4712 4715 5024 5180 +472 +460 +468 +465 +156 +10.0255% +9.7458% +9.9321% +9.8621% +3.1051%
Seer_Astral_45 5802 6297 6122 6133 6231
Seer_Astral_single 4685 4700 4632 5060 5187 +502 +487 +555 +127 +10.7150% +10.3617% +11.9819% +2.5099%
YEAST_KO_Astral 4565 4795 4676 4673 4737
EWZ_2P_MBR_Exploris 7041 7234 7468 +427 +234 +6.0645% +3.2347%
EWZ_2P_MBR_Exploris_Human 6167 6252 6355 +188 +103 +3.0485% +1.6475%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7138 7433 +546 +295 +7.9280% +4.1328%
MacCoss_Eclipse_Normalization_noNorm 5804 6247 6475 +671 +228 +11.5610% +3.6498%
MacCoss_Eclipse_Normalization_yesNorm 5804 6247 6475 +671 +228 +11.5610% +3.6498%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 604890
KEAP1KO_Eclipse 90611 91884 +1273
MTAC_3P_Alternating 65364 65950 +586
MTAC_3P_Standard 65728 66613 +885
MTAC_Yeast_Alternating_3min 12579 12683 +104
MTAC_Yeast_Alternating_5min 12857 12953 +96
MTAC_Yeast_Standard_3min 12560 12642 +82
MTAC_Yeast_Standard_5min 12943 13133 +190
Olsen_Astral_3P 238278
Olsen_Exploris_3P 156819 159410 +2591
SCIEX_3P 73546
SCP_Astral_1000pg_12ms 11409 11867 +458
SCP_Astral_1000pg_24ms 11204 11629 +425
SCP_Astral_1000pg_3ms 9020 9928 +908
SCP_Astral_1000pg_6ms 6450 6728 +278
SCP_Astral_10ng_12ms 17249 17672 +423
SCP_Astral_10ng_24ms 14758 15268 +510
SCP_Astral_10ng_3ms 17484 18073 +589
SCP_Astral_10ng_6ms 18141 18722 +581
SCP_Astral_250pg_12ms 5202 5580 +378
SCP_Astral_250pg_24ms 5557 5888 +331
SCP_Astral_250pg_3ms 2770 3010 +240
SCP_Astral_250pg_6ms 4489 4614 +125
SCP_Astral_500pg_12ms 7729 7974 +245
SCP_Astral_500pg_24ms 8124 8320 +196
SCP_Astral_500pg_3ms 5272 5582 +310
SCP_Astral_500pg_6ms 7098 7547 +449
SCP_Astral_MBR 20564 21274 +710
Seer_Astral_45 233431
Seer_Astral_single 5060 5187 +127
YEAST_KO_Astral 1341718
EWZ_2P_MBR_Exploris 247728 252290 +4562
EWZ_2P_MBR_Exploris_Human 115546 117481 +1935
EWZ_2P_MBR_Exploris_YeastHuman 131734 135025 +3291
MacCoss_Eclipse_Normalization_noNorm 187457 192919 +5462
MacCoss_Eclipse_Normalization_yesNorm 187457 192919 +5462

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0006 -0.0009 +0.0002 -0.0002
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0009 -0.0002 -0.0002
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0012 -0.0005 -0.0001 -0.0005 +0.0005 +0.0002 +0.0006
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0015 -0.0012 +0.0002 -0.0016 -0.0006 -0.0005 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0013 -0.0020 -0.0005 -0.0001 +0.0006 -0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0015 -0.0012 -0.0003 -0.0001 -0.0001 -0.0004
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0021 -0.0017 +0.0002 -0.0003 -0.0005 +0.0003 +0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0006 -0.0010 +0.0000 +0.0009 +0.0014 -0.0005
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 -0.0000 -0.0006 +0.0000
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0010 -0.0002 +0.0000 -0.0004 +0.0009 -0.0006 -0.0012
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0021 -0.0011 +0.0011 +0.0018 +0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0019 0.0012 +0.0066 +0.0045 +0.0043 +0.0058 -0.0008
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0005 0.0004 +0.0034 +0.0052 +0.0034 +0.0043 +0.0010
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0002 -0.0014 -0.0012 -0.0003 +0.0022 +0.0012 -0.0012
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0010 -0.0000 +0.0022 +0.0016 +0.0024 +0.0010
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0003 0.0002 +0.0022 -0.0007 +0.0017 +0.0015 -0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0002 -0.0001 +0.0024 +0.0026 +0.0018 +0.0017 +0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 0.0005 -0.0001 +0.0007 -0.0002 +0.0021 +0.0011 -0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0035 0.0033 +0.0072 +0.0073 +0.0030 +0.0085 -0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0000 -0.0000 +0.0002 +0.0012 +0.0024 +0.0031 -0.0000
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0040 0.0043 +0.0112 +0.0043 +0.0003
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0012 0.0009 +0.0060 +0.0035 +0.0058 -0.0004
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0001 0.0001 +0.0023 +0.0011 +0.0028 +0.0027 -0.0000
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0015 0.0005 +0.0017 +0.0029 +0.0017 +0.0016 -0.0010
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0030 0.0038 +0.0051 +0.0061 +0.0073 +0.0008
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0024 0.0018 +0.0049 +0.0050 +0.0032 -0.0006
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 -0.0008 +0.0019 +0.0012 +0.0006 +0.0014 +0.0001
Seer_Astral_45_Entrapment -0.0023 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0006 +0.0028 +0.0004
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0026 0.0004 -0.0022 +0.0004 -0.0027
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0026 -0.0024 +0.0005 +0.0002
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0041 -0.0032 -0.0022 -0.0021 -0.0037 -0.0039 +0.0009
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0031 -0.0011 +0.0002 +0.0014 +0.0018 +0.0014 +0.0020
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0021 +0.0045 +0.0032 +0.0027 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0009 -0.0027 +0.0014 +0.0011 +0.0021 +0.0007 -0.0018
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0033 -0.0037 +0.0021 +0.0010 -0.0018 -0.0010 -0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0045 -0.0009 -0.0000 +0.0010 -0.0005
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0043 -0.0046 -0.0044 -0.0003
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0023
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0004 +0.0025 -0.0002 +0.0025 +0.0005 +0.0001
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0027
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0022 -0.0010 +0.0039 +0.0031 +0.0032 +0.0012
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0060 -0.0041 +0.0029 +0.0017 +0.0029 +0.0029 +0.0019
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0016 -0.0009 +0.0050 +0.0050 +0.0063 +0.0063 -0.0025
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0007 -0.0024 -0.0007 +0.0025 +0.0019 +0.0021 -0.0017
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0065 -0.0061 -0.0007 -0.0022 -0.0008 +0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0035 -0.0018 +0.0014 +0.0005 -0.0002 +0.0027 +0.0017
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0006 -0.0023 +0.0014 +0.0050 +0.0044 +0.0038 -0.0016
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0042 +0.0013 -0.0022 +0.0012 +0.0005 -0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0011 0.0026 +0.0079 +0.0102 +0.0060 +0.0089 +0.0015
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0011 -0.0026 +0.0015 +0.0016 -0.0000 -0.0013 -0.0037
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0117 0.0054 +0.0082 +0.0054 +0.0140 +0.0054 -0.0063
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0046 0.0032 +0.0131 +0.0099 +0.0116 +0.0120 -0.0014
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0032 0.0036 +0.0072 +0.0076 +0.0022 +0.0057 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0000 -0.0008 +0.0012 -0.0007 +0.0043 +0.0054 -0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0024 -0.0031 +0.0011 -0.0101 -0.0051 -0.0030 -0.0055
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0018 0.0041 +0.0086 +0.0086 +0.0049 +0.0097 +0.0023
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0002 -0.0035 +0.0024 -0.0005 -0.0010 +0.0015 -0.0033
Seer_Astral_45_Entrapment -0.0049 -0.0013
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0042 +0.0116 +0.0021
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0003 0.0001 +0.0014 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0005 -0.0004 -0.0002 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0005 -0.0004 -0.0002 -0.0006 -0.0002 -0.0003 +0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0006 +0.0003 -0.0008 -0.0002 -0.0003 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0009 -0.0014 -0.0004 -0.0001 +0.0000 -0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0007 -0.0010 -0.0006 -0.0002 -0.0000 -0.0002 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0015 -0.0011 -0.0003 -0.0004 -0.0003 -0.0001 +0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0004 -0.0007 +0.0002 +0.0004 +0.0008 -0.0003
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0003 +0.0000 +0.0000
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0010 0.0003 +0.0008 -0.0002 +0.0010 +0.0004 -0.0007
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0012 -0.0010 +0.0005 +0.0020 +0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 0.0007 0.0000 +0.0046 +0.0029 +0.0031 +0.0038 -0.0006
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0006 0.0003 +0.0024 +0.0033 +0.0029 +0.0030 +0.0009
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0001 -0.0009 -0.0011 -0.0003 +0.0018 +0.0015 -0.0010
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 -0.0001 +0.0015 +0.0009 +0.0015 +0.0007
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 0.0002 -0.0003 +0.0011 -0.0006 +0.0009 +0.0005 -0.0004
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0002 0.0001 +0.0021 +0.0021 +0.0017 +0.0016 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0000 -0.0009 -0.0004 -0.0011 +0.0003 -0.0001 -0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0021 0.0024 +0.0054 +0.0050 +0.0026 +0.0055 +0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0006 0.0003 +0.0010 +0.0011 +0.0016 +0.0017 +0.0009
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0036 0.0054 +0.0113 +0.0054 +0.0017
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0020 0.0004 +0.0041 +0.0026 +0.0035 -0.0016
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0004 0.0017 +0.0036 +0.0021 +0.0037 +0.0030 +0.0013
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0016 0.0009 +0.0025 +0.0027 +0.0027 +0.0026 -0.0007
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0033 0.0030 +0.0011 +0.0034 +0.0046 -0.0003
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0017 0.0015 +0.0040 +0.0034 +0.0025 -0.0002
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0001 -0.0007 +0.0010 +0.0008 +0.0001 +0.0006 -0.0007
Seer_Astral_45_Entrapment -0.0011 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0006 +0.0028 +0.0004
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0007
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0016 -0.0001 +0.0011 -0.0017
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0013 +0.0003 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0021 -0.0019 -0.0017 -0.0016 -0.0021 -0.0021 +0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0013 -0.0012 -0.0004 +0.0002 +0.0009 +0.0006 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0002 +0.0035 +0.0032 +0.0028 +0.0010
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0006 +0.0031 +0.0015 +0.0018 +0.0007 -0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0017 +0.0021 +0.0018 -0.0003 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0027 -0.0004 +0.0000 +0.0011 -0.0005
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0022 -0.0021 -0.0017 +0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0016
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0008 -0.0008 +0.0018 -0.0015 +0.0009 +0.0008 -0.0001
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0013 -0.0007 +0.0030 +0.0016 +0.0026 +0.0006
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0045 -0.0026 +0.0023 +0.0030 +0.0032 +0.0017 +0.0019
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0005 -0.0011 +0.0033 +0.0022 +0.0029 +0.0020 -0.0017
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0005 -0.0020 +0.0005 +0.0015 +0.0020 +0.0020 -0.0014
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0050 -0.0002 -0.0019 -0.0008 -0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0021 +0.0011 -0.0008 -0.0007 +0.0004 +0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0015 -0.0014 +0.0008 +0.0032 +0.0024 +0.0019 +0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0034 +0.0005 -0.0015 +0.0004 -0.0004 -0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0017 0.0030 +0.0068 +0.0071 +0.0049 +0.0060 +0.0013
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 0.0002 -0.0020 -0.0006 +0.0012 -0.0016 -0.0019 -0.0022
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0100 0.0107 +0.0168 +0.0189 +0.0154 +0.0107 +0.0007
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0018 0.0008 +0.0108 +0.0077 +0.0063 +0.0056 -0.0010
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0018 0.0041 +0.0081 +0.0077 +0.0049 +0.0069 +0.0023
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0003 -0.0003 +0.0016 -0.0003 +0.0040 +0.0042 +0.0000
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0000 -0.0009 +0.0023 -0.0076 -0.0037 -0.0013 -0.0010
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0023 0.0037 +0.0056 +0.0059 +0.0028 +0.0065 +0.0014
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0005 -0.0028 -0.0004 -0.0010 -0.0006 +0.0000 -0.0023
Seer_Astral_45_Entrapment -0.0029 -0.0000
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0043 +0.0117 +0.0023
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0024

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 6613 3883 -20512 -2730

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 174 185 -586 +11

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0263 0.0476 +0.0160 +0.0213

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 450 -217 -1061 -667

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -61 26 -164 +87

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 13 +4 +1 +1 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 12 +4 +0 +1 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 14 +3 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 1 +0 +1 -1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1652 0.1676 +0.0217 +0.0255 +0.0276 +0.0302 +0.0023
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1560 0.1580 +0.0187 +0.0218 +0.0229 +0.0256 +0.0020
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1615 0.1641 +0.0186 +0.0217 +0.0233 +0.0026
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1503 0.1497 -0.0034 +0.0087 +0.0121 +0.0141 -0.0006
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1710 0.1731 +0.0033 +0.0091 +0.0115 +0.0131 +0.0020
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1463 0.1482 -0.0021 +0.0116 +0.0145 +0.0160 +0.0020
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1530 +0.0050 +0.0031 +0.0035 +0.0026 -0.0001
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1542
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5939 0.5944 +0.0075 +0.0004
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2052 0.2067 +0.0351 +0.0015

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0852 +0.0089 +0.0113 +0.0125 +0.0132 +0.0008
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0810 +0.0086 +0.0107 +0.0110 +0.0121 +0.0005
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0751 0.0750 +0.0077 +0.0090 +0.0092 -0.0001
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0648 0.0640 -0.0138 +0.0037 +0.0048 +0.0052 -0.0007
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0800 0.0796 +0.0004 +0.0040 +0.0043 +0.0024 -0.0004
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0636 0.0651 -0.0120 +0.0083 +0.0082 +0.0082 +0.0015
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0985 0.0990 -0.0038 -0.0029 -0.0046 -0.0037 +0.0005
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1017
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5812 0.5801 -0.0081 -0.0012
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1380 0.1380 +0.0147 -0.0001

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 0.0008 0.0012 -0.0020 +0.0070 +0.0012 -0.0769 +0.0004
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0137 -0.0145 -0.0076 +0.0055 -0.0002 -0.0272 +0.0008
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0092 -0.0093 +0.0007 -0.0023 -0.0001 +0.0083 +0.0001
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0754 -0.0729 +0.0012 -0.0008 +0.0020 -0.0514 -0.0025
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0717 -0.0723 -0.0054 -0.0006 -0.0003 -0.0004 +0.0005
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0571 -0.0615 -0.0080 +0.0050 -0.0016 +0.0281 +0.0043
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0453 +0.0114 +0.0329 -0.0052 -0.0508
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1858 +0.0115 +0.0151 +0.0011 -0.0433
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1736 -0.0082 +0.0282 -0.0195 +0.1538
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0286 +0.0067 +0.0305 +0.0014 -0.0136
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3292 +0.0081 +0.0093 -0.0002 -0.0137
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1211 -0.0024 -0.0402 -0.0016 +0.0876
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2195 +0.0015 +0.0038 -0.0038 -0.0083
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2343 +0.0262 -0.0191 +0.0011 +0.0320
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1334 0.1348 -0.0059 -0.0059 +0.0211 -0.1031 +0.0015
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0845 -0.0845 +0.0062 +0.0047 -0.0191 +0.0240 +0.0001
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2000 0.2005 +0.0183 -0.0240 +0.0287 -0.0785 +0.0004
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1045 0.1042 +0.0048 -0.0054 -0.0067 +0.0163 -0.0003
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0483 +0.0009 +0.0001 -0.0089 +0.0026 +0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2158 0.2142 +0.0051 -0.0017 +0.0004 +0.0122 -0.0015
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1446 0.1432 -0.0032 -0.0062 -0.0160 +0.1222 -0.0015
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0785 -0.0782 +0.0043 -0.0045 -0.0054 -0.0235 -0.0003
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0507 0.0473 +0.0169 -0.0238 +0.0355 -0.0458 -0.0034
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0385 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0065 -0.0031 +0.0125 +0.0006 -0.0615
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0309 -0.0051 -0.0071 +0.0012 +0.0273
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0760 +0.0119 -0.0026 -0.0002 +0.0335
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0249
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0162 -0.0331 +0.0073 +0.0004 -0.0068
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0563
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1548 -0.0356 -0.0145 +0.0024 +0.0961
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1053 -0.0468 -0.0064 -0.0010 +0.0685

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0010 -0.0007 +0.0009 +0.0076 -0.0005 -0.0723 -0.0003
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0150 -0.0150 -0.0089 +0.0045 +0.0004 -0.0261 -0.0001
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0001 0.0005 +0.0054 -0.0044 +0.0010 -0.0034 +0.0004
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0770 -0.0751 +0.0013 +0.0005 -0.0055 -0.0436 -0.0020
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0699 -0.0691 -0.0060 -0.0005 -0.0005 -0.0002 -0.0008
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0489 -0.0537 -0.0084 +0.0078 -0.0007 +0.0180 +0.0048
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0544 +0.0142 +0.0365 -0.0057 -0.0359
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1346 +0.0050 +0.0043 -0.0072 -0.0288
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1874 -0.0338 -0.0246 +0.0154 +0.1702
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0229 +0.0064 +0.0290 +0.0021 -0.0296
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3048 +0.0072 +0.0066 -0.0010 -0.0008
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1116 +0.0002 -0.0402 -0.0012 +0.0829
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1028 +0.0124 -0.0135 -0.0021 +0.0517
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1962 -0.0003 +0.0009 -0.0042 +0.0005
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1989 +0.0289 -0.0188 +0.0012 +0.0186
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1590 0.1522 -0.0077 -0.0028 +0.0144 -0.0621 -0.0068
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0790 -0.0784 +0.0048 +0.0016 -0.0170 +0.0233 -0.0006
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2372 0.2293 +0.0504 -0.0481 +0.0073 -0.0282 -0.0079
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0985 0.1003 +0.0031 -0.0032 -0.0081 +0.0226 +0.0018
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0444 -0.0447 +0.0011 -0.0008 -0.0084 +0.0023 +0.0002
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2255 0.2261 +0.0036 -0.0008 +0.0016 +0.0222 +0.0006
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1259 0.1337 +0.0005 -0.0096 -0.0297 +0.1213 +0.0078
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0774 -0.0767 +0.0056 -0.0034 -0.0033 -0.0311 -0.0007
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0658 0.0479 +0.0405 -0.0089 +0.0322 -0.0515 -0.0179
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0464 +0.0258 +0.0029 -0.0003 -0.0236
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0237 -0.0049 +0.0142 +0.0054 -0.0441
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0289 -0.0001 -0.0108 +0.0000 +0.0248
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0809 +0.0137 -0.0048 +0.0001 +0.0402
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0984 -0.0232 +0.0027 +0.0012 +0.0358
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0184 -0.0350 +0.0076 +0.0002 -0.0033
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0658 +0.0131 -0.0109 +0.0003 +0.0542
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1615 -0.0435 -0.0160 +0.0023 +0.1036
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.1007 -0.0508 -0.0078 +0.0009 +0.0564

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1266 0.1294 +0.0343 +0.0202 -0.0086 -0.1812 +0.0028
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1144 0.1167 +0.0169 -0.0058 +0.0004 -0.0955 +0.0023
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1190 0.1188 +0.0117 -0.0078 +0.0011 -0.1419 -0.0002
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1431 0.1416 +0.0441 -0.0007 -0.0136 -0.1549 -0.0015
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1266 0.1288 +0.0164 -0.0031 -0.0002 -0.0926 +0.0021
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1285 0.1303 +0.0170 -0.0063 +0.0017 -0.1395 +0.0018
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1525 +0.0354 +0.0384 -0.0420 -0.4231
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2166 +0.0422 -0.0321 -0.0167 -0.1334
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3611 +0.2175 -0.0279 -0.1166 -0.8801
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1400 +0.0427 +0.0074 -0.0036 -0.1164
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2295 +0.0473 +0.0030 -0.0078 -0.1061
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1770 +0.0549 +0.0262 -0.0056 -0.2031
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1429 +0.0358 +0.0129 -0.0110 -0.1886
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1910 +0.0274 +0.0045 -0.0018 -0.0944
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1946 +0.0778 +0.0001 -0.0169 -0.3438
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1875 0.1936 +0.0445 +0.0761 -0.1281 -0.3834 +0.0061
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0485 0.0464 -0.0103 +0.0134 -0.0147 -0.1027 -0.0021
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3018 0.2952 -0.0030 +0.1483 +0.0078 -0.6557 -0.0066
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1851 0.1835 +0.0037 +0.0045 +0.0051 -0.1654 -0.0016
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0430 0.0420 +0.0676 -0.0087 -0.0168 -0.1087 -0.0010
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1860 0.1852 +0.0316 +0.0062 -0.0049 -0.1493 -0.0008
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2052 0.2066 -0.0093 +0.0378 -0.0706 -0.3716 +0.0014
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0596 0.0541 +0.0977 -0.0155 +0.0159 -0.1882 -0.0055
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4715 0.3945 +0.0737 +0.1982 -0.0827 -0.8036 -0.0770
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1056 +0.0321 -0.0450 -0.0051 -0.3770
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1288 +0.0200 -0.0293 -0.0344 -0.4130
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0783 +0.0068 -0.0387 -0.0080 -0.0284
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0871 +0.0190 -0.0584 -0.0028 -0.0649
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0977 +0.0281 -0.0478 -0.0031 -0.0967
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0885 +0.0273 -0.0601 -0.0037 -0.0455
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1008 +0.0130 -0.0614 -0.0008 -0.0842
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1632 +0.0619 -0.0455 -0.0143 -0.4108
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1083 +0.0688 -0.0494 -0.0103 -0.3888

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0570 0.0560 +0.0149 -0.0182 -0.0054 -0.0638 -0.0010
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0350 0.0377 +0.0035 +0.0005 +0.0043 -0.0465 +0.0027
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0396 0.0469 -0.0157 -0.0104 +0.0083 -0.0726 +0.0073
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0483 0.0457 -0.0042 +0.0002 -0.0084 -0.0713 -0.0026
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0383 0.0373 +0.0032 -0.0030 +0.0035 -0.0334 -0.0009
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0521 0.0521 +0.0000 +0.0073 -0.0081 -0.0733 -0.0000
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0444 +0.0402 -0.0136 +0.0467 -0.2213
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0756 +0.0316 -0.0208 -0.0112 -0.0330
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.0864 +0.1306 -0.0136 -0.0647 -0.3064
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0220 +0.0032 +0.0034 -0.0021 -0.0245
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0454 +0.0110 -0.0047 +0.0013 -0.0171
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0271 +0.0055 -0.0000 +0.0038 -0.0350
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0294 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0097
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0363 +0.0296 -0.0022 -0.0025 -0.0845
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0480 0.0572 +0.0146 +0.0452 -0.0355 -0.1797 +0.0093
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0174 0.0178 -0.0057 -0.0062 -0.0031 -0.0312 +0.0004
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0995 0.0743 -0.1294 +0.1626 +0.0090 -0.4010 -0.0252
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0336 0.0331 -0.0046 +0.0074 +0.0016 -0.0355 -0.0005
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0094 0.0083 +0.0109 -0.0066 +0.0090 -0.0340 -0.0010
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0353 0.0396 -0.0053 +0.0093 +0.0025 -0.0471 +0.0043
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0632 0.0773 -0.0166 +0.0170 -0.0166 -0.1543 +0.0142
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0192 0.0214 +0.0068 -0.0006 -0.0039 -0.0545 +0.0022
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1308 0.1234 -0.0891 -0.0032 -0.0082 -0.2996 -0.0074
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0565 +0.0682 -0.0593 -0.0056 -0.1658
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0758 +0.0668 -0.0849 -0.0031 -0.1677
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0332 +0.0113 -0.0357 +0.0198 -0.0196
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0243 -0.0054 -0.0154 +0.0040 -0.0244
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0262 -0.0011 -0.0225 +0.0112 -0.0346
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0243 +0.0094 -0.0181 -0.0013 -0.0214
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0342 -0.0134 -0.0199 -0.0090 -0.0333
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0576 +0.0271 -0.0671 +0.0055 -0.2016
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0403 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 118.1000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 13.5100 16.8400 -7.2300 -0.4800 -3.0300 -0.2900 +3.3300 -30.0374% -2.7714% -15.2491% -1.6929% +24.6484%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.4300 9.3100 -3.4400 +0.2400 +0.9500 +0.0200 +1.8800 -26.9804% +2.6461% +11.3636% +0.2153% +25.3028%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.2800 9.8000 -2.5100 +0.8400 +0.1400 -1.0100 +2.5200 -20.3899% +9.3750% +1.4493% -9.3432% +34.6154%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.7800 4.9200 +0.6900 +0.5100 -0.0200 +0.1400 +16.3121% +11.5646% -0.4049% +2.9289%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4000 5.2400 -0.1400 +0.8600 +0.4900 +0.7000 -0.1600 -2.6022% +19.6347% +10.3158% +15.4185% -2.9630%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.5600 4.8900 -0.5400 +0.7500 +0.4500 +0.2300 +0.3300 -9.9448% +18.1159% +10.1351% +4.9356% +7.2368%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9700 5.3600 -0.1900 +0.9400 +0.8300 +0.9000 +0.3900 -3.4234% +21.2670% +18.3223% +20.1794% +7.8471%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 48.4900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 16.6200 17 -10.6600 -2.7600 -1.3200 -2.2800 +0.3800 -38.5394% -13.9676% -7.2052% -11.8257% +2.2864%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.8600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.0300 5.0900 -0.7000 +0.5000 +0.4400 +1 +0.0600 -12.0898% +10.8932% +9.4624% +24.4499% +1.1928%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4200 4.9500 -1.3100 +0.5500 -0.9300 -0.4700 -20.9265% +12.5000% -15.8163% -8.6716%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.5400 4.9300 +0.4100 +1.2000 +0.1300 +1.2900 +0.3900 +9.0708% +32.1716% +2.7083% +35.4396% +8.5903%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.2100 4.1700 -1.5700 +0.6600 +0.2500 +0.7300 -0.0400 -27.3519% +18.8034% +6.3776% +21.2209% -0.9501%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.2500 6.4700 -0.6000 +0.9400 +0.9600 +0.7300 +1.2200 -8.4866% +16.9982% +17.4229% +12.7178% +23.2381%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.4100 5.8400 -1.7500 +0.1100 -0.3000 +0.3000 +0.4300 -23.0567% +1.9197% -4.8860% +5.4152% +7.9482%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2600 5.4000 -1.0500 +0.7300 +1.1000 +0.9900 +0.1400 -16.2791% +15.6317% +25.5814% +22.4490% +2.6616%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.1400 6.0800 -1.3000 +1.1500 +1.4500 +0.4600 +0.9400 -17.6152% +23.3266% +31.3175% +8.1851% +18.2879%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.7700 4.2600 -0.4800 +0.6000 +0.8700 -0.5100 -10.1266% +16.3934% +25.6637% -10.6918%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.6800 4.5000 -0.7600 +0.6600 +0.7400 -0.1800 -14.4487% +17.1875% +19.6809% -3.8462%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.8300 4.3900 -0.2600 +0.9600 +0.6800 +0.9400 +0.5600 -5.5914% +27.9883% +18.3288% +27.2464% +14.6214%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.6900 5.3200 +1.1500 +2.0300 +1.6300 +2.0500 +0.6300 +27.5779% +61.7021% +44.1734% +62.6911% +13.4328%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2300 4.4600 -0.8200 +0.9300 +0.8600 +0.9700 +0.2300 -15.5303% +26.3456% +23.8889% +27.7937% +5.4374%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.8700 4.7000 -0.8100 +0.8800 +0.5500 -0.1100 -0.1700 -14.7005% +23.0366% +13.2530% -2.2869% -3.4908%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5 4.9700 +0.2400 +1.5100 +1.4000 -0.0300 +5.0740% +43.6416% +39.2157% -0.6000%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.5400 4.7800 +0.1300 +1.1600 +1.0500 +1.0000 +0.2400 +2.7957% +32.0442% +28.1501% +26.4550% +5.2863%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5000 8.2800 -0.7600 +1.7300 +2.1800 +0.7800 -8.4071% +26.4122% +35.7377% +10.4000%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 67.1900
Seer_Astral_single 4.4700 4.1400 5.5800 5.8300 4.8400 +0.3700 +0.7000 -0.7400 -0.9900 +8.2774% +16.9082% -13.2616% -16.9811%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 148
EWZ_2P_MBR_Exploris 26.1800 19.1700 25.7000 -0.4800 +6.5300 -1.8335% +34.0636%
EWZ_2P_MBR_Exploris_Human 12.9100 11.3400 13.9700 +1.0600 +2.6300 +8.2107% +23.1922%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.8500 14.8900 +2.8300 +3.0400 +23.4660% +25.6540%
MacCoss_Eclipse_Normalization_noNorm 27.5100 27.3400 36.7000 +9.1900 +9.3600 +33.4060% +34.2356%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.1700 40.5900 +12.9200 +12.4200 +46.6932% +44.0895%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png