Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6609480
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1323723 1318491 +221997 +11486 +6536 +24950 -5232 +20.2461% +0.8788% +0.4982% +1.9288% -0.3952%
MTAC_3P_Alternating 586322 615762 610710 599881 643010 642882 +56560 +27120 +32172 +43001 -128 +9.6466% +4.4043% +5.2680% +7.1683% -0.0199%
MTAC_3P_Standard 596590 623022 617574 607435 647740 648953 +52363 +25931 +31379 +41518 +1213 +8.7770% +4.1621% +5.0810% +6.8350% +0.1873%
MTAC_Yeast_Alternating_3min 137548 136839 135560 150217 151657 +14109 +14818 +16097 +1440 +10.2575% +10.8288% +11.8744% +0.9586%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 169821 169659 +14018 +13108 +13150 +14624 -162 +9.0066% +8.3730% +8.4021% +9.4327% -0.0954%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 152904 152635 +14126 +13250 +13343 +14750 -269 +10.1986% +9.5060% +9.5792% +10.6973% -0.1759%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 172665 171340 +12378 +12608 +12180 +13418 -1325 +7.7868% +7.9429% +7.6527% +8.4966% -0.7674%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3493223
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1343705 1339098 +316362 +184429 +215225 +155014 -4607 +30.9329% +15.9725% +19.1503% +13.0915% -0.3429%
SCIEX_3P 672242 749525 722698 714454 777527
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 57077 56656 +15774 +14956 +14231 +14556 -421 +38.5842% +35.8657% +33.5439% +34.5748% -0.7376%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 54481 54552 +13483 +12150 +12529 +13400 +71 +32.8301% +28.6543% +29.8146% +32.5622% +0.1303%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 45556 45724 +36984 +22609 +22709 +22811 +168 +423.1579% +97.8109% +98.6704% +99.5548% +0.3688%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 30877 30843 +13908 +13290 +12434 +12495 -34 +82.1258% +75.7136% +67.5430% +68.1001% -0.1101%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 121568 120758 +20850 +17867 +21775 +22110 -810 +20.8692% +17.3650% +21.9987% +22.4130% -0.6663%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 90529 90045 +18947 +17317 +18600 +18919 -484 +26.6491% +23.8106% +26.0340% +26.5993% -0.5346%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 131570 132108 +26404 +25611 +26486 +27674 +538 +24.9792% +24.0486% +25.0762% +26.4990% +0.4089%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 136398 136418 +21261 +19102 +22096 +23337 +20 +18.4626% +16.2825% +19.3279% +20.6374% +0.0147%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 19941 20423 +10229 +9617 +9185 +9190 +482 +100.3433% +88.9969% +81.7316% +81.8125% +2.4171%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 22050 22095 +7288 +6662 +6054 +6396 +45 +49.2200% +43.1672% +37.7408% +40.7414% +0.2041%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 9476 9470 +8209 +7438 +7020 +7084 -6 +650.9913% +366.0433% +286.5306% +296.8986% -0.0633%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16675 16740 +15304 +11957 +11050 +11009 +65 +1065.7382% +249.9895% +194.2004% +192.0956% +0.3898%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 33713 33777 +12067 +11882 +11197 +11314 +64 +55.5827% +54.2681% +49.5881% +50.3673% +0.1898%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 34082 34086 +8226 +7943 +7826 +8461 +4 +31.8097% +30.3829% +29.8020% +33.0185% +0.0117%
SCP_Astral_500pg_3ms 3484 6898 6834 21607 22155 +18671 +15257 +15321 +548 +535.9070% +221.1801% +224.1879% +2.5362%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 30898 30975 +20276 +19501 +18093 +18086 +77 +189.5130% +169.9582% +140.4518% +140.3212% +0.2492%
SCP_Astral_MBR 92167 93585 91884 90864 114000 113685 +21518 +20100 +21801 +22821 -315 +23.3468% +21.4778% +23.7267% +25.1156% -0.2763%
Seer_Astral_45 2512737 3124006 3135497 2971207 3076143
Seer_Astral_single 56699 55793 55891 65466 65640 +8941 +9847 +9749 +174 +15.7692% +17.6492% +17.4429% +0.2658%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17691633
EWZ_2P_MBR_Exploris 1776128 1902187 1899560 +123432 -2627 +6.9495% -0.1381%
EWZ_2P_MBR_Exploris_Human 836809 897058 897720 +60911 +662 +7.2790% +0.0738%
EWZ_2P_MBR_Exploris_YeastHuman 914924 1000886 1000790 +85866 -96 +9.3850% -0.0096%
MacCoss_Eclipse_Normalization_noNorm 2078034 2320175 2325208 +247174 +5033 +11.8946% +0.2169%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2320175 2325208 +247174 +5033 +11.8946% +0.2169%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 105386
KEAP1KO_Eclipse 111504 133619 131359 132031 155092 154986 +43482 +21367 +23627 +22955 -106 +38.9959% +15.9910% +17.9866% +17.3861% -0.0683%
MTAC_3P_Alternating 108267 117352 114659 114816 129207 128905 +20638 +11553 +14246 +14089 -302 +19.0621% +9.8447% +12.4247% +12.2709% -0.2337%
MTAC_3P_Standard 110265 118693 115800 116148 130221 130232 +19967 +11539 +14432 +14084 +11 +18.1082% +9.7217% +12.4629% +12.1259% +0.0084%
MTAC_Yeast_Alternating_3min 48858 49032 48995 57316 57426 +8568 +8394 +8431 +110 +17.5365% +17.1194% +17.2079% +0.1919%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 63822 63941 +9972 +8866 +8101 +8057 +119 +18.4773% +16.0980% +14.5075% +14.4174% +0.1865%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 58536 58620 +9999 +8955 +8331 +8160 +84 +20.5652% +18.0308% +16.5662% +16.1712% +0.1435%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 64976 64697 +9637 +8778 +7990 +7870 -279 +17.5027% +15.6977% +14.0900% +13.8491% -0.4294%
Olsen_Astral_3P 198770 231103 234505 234149 249346
Olsen_Exploris_3P 51272 58784 55047 58593 75857 75791 +24519 +17007 +20744 +17198 -66 +47.8214% +28.9313% +37.6842% +29.3516% -0.0870%
SCIEX_3P 82206 93920 87927 87858 109060
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 22198 22156 +7716 +7198 +6907 +6449 -42 +53.4349% +48.1214% +45.2948% +41.0581% -0.1892%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 21082 21078 +6595 +6013 +6162 +6008 -4 +45.5361% +39.9137% +41.3113% +39.8673% -0.0190%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 19085 19055 +10315 +9679 +9666 +9691 -30 +118.0206% +103.2317% +102.9503% +103.4921% -0.1572%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 17939 18065 +9167 +8806 +8281 +8255 +126 +103.0232% +95.1075% +84.6382% +84.1488% +0.7024%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 44875 44540 +9675 +8243 +10198 +10115 -335 +27.7499% +22.7099% +29.6954% +29.3827% -0.7465%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 33702 33469 +8820 +8003 +8350 +8246 -233 +35.7824% +31.4262% +33.2418% +32.6924% -0.6914%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 49714 49954 +13266 +12278 +12305 +12533 +240 +36.1590% +32.5884% +32.6835% +33.4919% +0.4828%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 50717 50608 +10452 +9063 +10565 +10715 -109 +26.0285% +21.8149% +26.3841% +26.8593% -0.2149%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 8468 8614 +4948 +4665 +4405 +4368 +146 +134.9700% +118.1312% +104.6567% +102.8733% +1.7241%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8977 9023 +3724 +3412 +3168 +2957 +46 +70.2774% +60.8091% +54.1076% +48.7471% +0.5124%
SCP_Astral_250pg_3ms 675 721 908 879 4566 4580 +3905 +3859 +3672 +3701 +14 +578.5185% +535.2288% +404.4053% +421.0466% +0.3066%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 7210 7233 +5797 +5495 +5088 +5070 +23 +403.6908% +316.1680% +237.2028% +234.3967% +0.3190%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 13590 13637 +5843 +5665 +5385 +5231 +47 +74.9679% +71.0612% +65.2569% +62.2294% +0.3458%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 13429 13365 +4207 +4023 +3994 +3951 -64 +45.9380% +43.0636% +42.6209% +41.9694% -0.4766%
SCP_Astral_500pg_3ms 1846 2600 2586 9627 9816 +7970 +7216 +7230 +189 +431.7443% +277.5385% +279.5824% +1.9632%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 12588 12865 +8991 +8710 +8091 +8060 +277 +232.0857% +209.6270% +169.4805% +167.7419% +2.2005%
SCP_Astral_MBR 24110 24991 24570 24544 32485 32570 +8460 +7579 +8000 +8026 +85 +35.0892% +30.3269% +32.5600% +32.7005% +0.2617%
Seer_Astral_45 69584 90103 87204 87620 96756
Seer_Astral_single 56699 55793 55891 65466 65640 +8941 +9847 +9749 +174 +15.7692% +17.6492% +17.4429% +0.2658%
YEAST_KO_Astral 66823 87888 87428 86498 87951
EWZ_2P_MBR_Exploris 55271 65251 65161 +9890 -90 +17.8937% -0.1379%
EWZ_2P_MBR_Exploris_Human 48465 56310 56216 +7751 -94 +15.9930% -0.1669%
EWZ_2P_MBR_Exploris_YeastHuman 51246 60613 60632 +9386 +19 +18.3156% +0.0313%
MacCoss_Eclipse_Normalization_noNorm 73278 83632 83289 +10011 -343 +13.6617% -0.4101%
MacCoss_Eclipse_Normalization_yesNorm 73278 83632 83289 +10011 -343 +13.6617% -0.4101%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 619389
KEAP1KO_Eclipse 87920 92888 93982 93441 92520 92413 +4493 -475 -1569 -1028 -107 +5.1103% -0.5114% -1.6695% -1.1002% -0.1157%
MTAC_3P_Alternating 63773 63974 63611 63015 67160 67020 +3247 +3046 +3409 +4005 -140 +5.0915% +4.7613% +5.3591% +6.3556% -0.2085%
MTAC_3P_Standard 64317 64464 64219 63385 67434 67335 +3018 +2871 +3116 +3950 -99 +4.6924% +4.4536% +4.8521% +6.2318% -0.1468%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12772 12774 +707 +804 +834 +2 +5.8590% +6.7168% +6.9849% +0.0157%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 13087 13101 +669 +630 +739 +773 +14 +5.3813% +5.0517% +5.9780% +6.2703% +0.1070%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12755 12744 +736 +697 +784 +776 -11 +6.1292% +5.7857% +6.5552% +6.4840% -0.0862%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 13231 13196 +635 +731 +719 +786 -35 +5.0553% +5.8644% +5.7626% +6.3336% -0.2645%
Olsen_Astral_3P 236395 245756 242430 240719 241901
Olsen_Exploris_3P 146224 153534 153990 155827 160760 160199 +13975 +6665 +6209 +4372 -561 +9.5573% +4.3411% +4.0321% +2.8057% -0.3490%
SCIEX_3P 70810 74366 72157 71550 76039
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 12133 12036 +2873 +2508 +2451 +2702 -97 +31.3544% +26.3224% +25.5712% +28.9479% -0.7995%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11973 11920 +2622 +2159 +2508 +2367 -53 +28.1996% +22.1186% +26.6468% +24.7776% -0.4427%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 10096 10168 +7718 +4084 +3921 +4052 +72 +315.0204% +67.1269% +62.7661% +66.2525% +0.7132%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6969 6915 +2212 +2327 +1957 +1992 -54 +47.0338% +50.7193% +39.4716% +40.4631% -0.7749%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17951 17923 +1733 +1643 +1898 +1868 -28 +10.7041% +10.0921% +11.8440% +11.6350% -0.1560%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 15372 15418 +1819 +1577 +1730 +1747 +46 +13.3760% +11.3937% +12.6388% +12.7789% +0.2992%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 18442 18470 +2218 +2194 +2353 +2545 +28 +13.6476% +13.4800% +14.5995% +15.9812% +0.1518%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 19032 19038 +2021 +1860 +2125 +2293 +6 +11.8764% +10.8278% +12.5643% +13.6936% +0.0315%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5738 5790 +2143 +1877 +1926 +2251 +52 +58.7606% +47.9683% +49.8447% +63.6055% +0.9062%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 6064 6170 +1870 +1567 +1373 +1193 +106 +43.4884% +34.0430% +28.6221% +23.9703% +1.7480%
SCP_Astral_250pg_3ms 576 22 936 741 3057 3012 +2436 +2990 +2076 +2271 -45 +422.9167% +13590.9091% +221.7949% +306.4777% -1.4720%
SCP_Astral_250pg_6ms 637 2080 2029 2046 5016 4889 +4252 +2809 +2860 +2843 -127 +667.5039% +135.0481% +140.9561% +138.9541% -2.5319%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 8355 8175 +1930 +1829 +2159 +2048 -180 +30.9047% +28.8213% +35.8876% +33.4258% -2.1544%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8455 8559 +1837 +1830 +1547 +1536 +104 +27.3282% +27.1957% +22.0622% +21.8710% +1.2300%
SCP_Astral_500pg_3ms 982 2365 2177 5821 5943 +4961 +3578 +3766 +122 +505.1935% +151.2896% +172.9904% +2.0959%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7895 7867 +4159 +3860 +3822 +3949 -28 +112.1629% +96.3314% +94.4870% +100.7912% -0.3547%
SCP_Astral_MBR 20165 20129 20074 19793 21548 21651 +1486 +1522 +1577 +1858 +103 +7.3692% +7.5612% +7.8559% +9.3872% +0.4780%
Seer_Astral_45 225377 241455 241952 237727 240095
Seer_Astral_single 4685 4700 4632 5284 5284 +599 +584 +652 +0 +12.7855% +12.4255% +14.0760% +0%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1356343
EWZ_2P_MBR_Exploris 245259 252855 252806 +7547 -49 +3.0772% -0.0194%
EWZ_2P_MBR_Exploris_Human 115447 117669 117814 +2367 +145 +2.0503% +0.1232%
EWZ_2P_MBR_Exploris_YeastHuman 128968 135382 135062 +6094 -320 +4.7252% -0.2364%
MacCoss_Eclipse_Normalization_noNorm 178174 196179 195569 +17395 -610 +9.7629% -0.3109%
MacCoss_Eclipse_Normalization_yesNorm 178174 196179 195569 +17395 -610 +9.7629% -0.3109%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6446
KEAP1KO_Eclipse 7845 8175 8155 8203 8582 8562 +717 +387 +407 +359 -20 +9.1396% +4.7339% +4.9908% +4.3764% -0.2330%
MTAC_3P_Alternating 11361 11494 11351 11338 12417 12343 +982 +849 +992 +1005 -74 +8.6436% +7.3865% +8.7393% +8.8640% -0.5960%
MTAC_3P_Standard 11473 11560 11477 11396 12413 12391 +918 +831 +914 +995 -22 +8.0014% +7.1886% +7.9638% +8.7311% -0.1772%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4431 4440 +312 +348 +340 +9 +7.5581% +8.5044% +8.2927% +0.2031%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4500 4511 +296 +263 +293 +297 +11 +7.0225% +6.1911% +6.9464% +7.0479% +0.2444%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4419 4405 +330 +271 +315 +308 -14 +8.0982% +6.5554% +7.7017% +7.5177% -0.3168%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4553 4536 +287 +299 +292 +305 -17 +6.7545% +7.0569% +6.8803% +7.2087% -0.3734%
Olsen_Astral_3P 13820 14378 14293 14296 14792
Olsen_Exploris_3P 7255 7582 7340 7479 8203 8183 +928 +601 +843 +704 -20 +12.7912% +7.9267% +11.4850% +9.4130% -0.2438%
SCIEX_3P 8652 9109 8679 8618 9869
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4418 4377 +1132 +988 +966 +1059 -41 +34.8844% +29.1531% +28.3201% +31.9168% -0.9280%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4366 4340 +1086 +907 +1049 +906 -26 +33.3743% +26.4200% +31.8748% +26.3832% -0.5955%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3818 3868 +1418 +1472 +1418 +1471 +50 +57.8776% +61.4357% +57.8776% +61.3684% +1.3096%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3765 3752 +1244 +1316 +1118 +1110 -13 +49.6013% +54.0230% +42.4450% +42.0136% -0.3453%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6272 6253 +674 +597 +749 +707 -19 +12.0810% +10.5552% +13.6083% +12.7479% -0.3029%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5427 5446 +725 +608 +663 +635 +19 +15.3569% +12.5672% +13.8616% +13.1989% +0.3501%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6509 6519 +908 +864 +923 +966 +10 +16.1825% +15.2785% +16.4939% +17.3960% +0.1536%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6711 6693 +847 +744 +850 +888 -18 +14.4885% +12.5063% +14.5473% +15.2972% -0.2682%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 2169 2172 +880 +748 +766 +884 +3 +68.1115% +52.5281% +54.4808% +68.6335% +0.1383%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2249 2293 +725 +633 +535 +420 +44 +46.2372% +38.1325% +30.4323% +22.4239% +1.9564%
SCP_Astral_250pg_3ms 307 8 350 283 1309 1260 +953 +1252 +910 +977 -49 +310.4235% +15650% +260% +345.2297% -3.7433%
SCP_Astral_250pg_6ms 637 756 751 766 1948 1865 +1228 +1109 +1114 +1099 -83 +192.7786% +146.6931% +148.3356% +143.4726% -4.2608%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 3061 3016 +809 +741 +847 +786 -45 +36.6561% +32.5714% +39.0503% +35.2466% -1.4701%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 3110 3128 +725 +740 +651 +589 +18 +30.1706% +30.9883% +26.2818% +23.1981% +0.5788%
SCP_Astral_500pg_3ms 525 902 828 2347 2392 +1867 +1490 +1564 +45 +355.6190% +165.1885% +188.8889% +1.9173%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2957 2971 +1653 +1524 +1485 +1536 +14 +125.4173% +105.3214% +99.9327% +107.0383% +0.4735%
SCP_Astral_MBR 4708 4720 4712 4715 5277 5320 +612 +600 +608 +605 +43 +12.9992% +12.7119% +12.9032% +12.8314% +0.8149%
Seer_Astral_45 5802 6297 6122 6133 6524
Seer_Astral_single 4685 4700 4632 5284 5284 +599 +584 +652 +0 +12.7855% +12.4255% +14.0760% +0%
YEAST_KO_Astral 4565 4795 4676 4673 4787
EWZ_2P_MBR_Exploris 7041 7455 7452 +411 -3 +5.8372% -0.0402%
EWZ_2P_MBR_Exploris_Human 6167 6380 6376 +209 -4 +3.3890% -0.0627%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7443 7409 +522 -34 +7.5795% -0.4568%
MacCoss_Eclipse_Normalization_noNorm 5804 6526 6480 +676 -46 +11.6471% -0.7049%
MacCoss_Eclipse_Normalization_yesNorm 5804 6526 6480 +676 -46 +11.6471% -0.7049%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 619380
KEAP1KO_Eclipse 92483 92381 -102
MTAC_3P_Alternating 67152 67011 -141
MTAC_3P_Standard 67426 67325 -101
MTAC_Yeast_Alternating_3min 12758 12763 +5
MTAC_Yeast_Alternating_5min 13064 13085 +21
MTAC_Yeast_Standard_3min 12747 12735 -12
MTAC_Yeast_Standard_5min 13224 13194 -30
Olsen_Astral_3P 241833
Olsen_Exploris_3P 160758 160197 -561
SCIEX_3P 76027
SCP_Astral_1000pg_12ms 12132 12031 -101
SCP_Astral_1000pg_24ms 11970 11916 -54
SCP_Astral_1000pg_3ms 10087 10162 +75
SCP_Astral_1000pg_6ms 6957 6903 -54
SCP_Astral_10ng_12ms 17944 17910 -34
SCP_Astral_10ng_24ms 15372 15418 +46
SCP_Astral_10ng_3ms 18426 18454 +28
SCP_Astral_10ng_6ms 19015 19029 +14
SCP_Astral_250pg_12ms 5738 5788 +50
SCP_Astral_250pg_24ms 6064 6168 +104
SCP_Astral_250pg_3ms 3054 3006 -48
SCP_Astral_250pg_6ms 5016 4887 -129
SCP_Astral_500pg_12ms 8355 8173 -182
SCP_Astral_500pg_24ms 8451 8553 +102
SCP_Astral_500pg_3ms 5809 5934 +125
SCP_Astral_500pg_6ms 7894 7866 -28
SCP_Astral_MBR 21544 21647 +103
Seer_Astral_45 240081
Seer_Astral_single 5284 5284 +0
YEAST_KO_Astral 1356326
EWZ_2P_MBR_Exploris 252824 252774 -50
EWZ_2P_MBR_Exploris_Human 117647 117789 +142
EWZ_2P_MBR_Exploris_YeastHuman 135376 135051 -325
MacCoss_Eclipse_Normalization_noNorm 196173 195565 -608
MacCoss_Eclipse_Normalization_yesNorm 196173 195565 -608

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0001
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0004 -0.0007 +0.0005 -0.0002
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0010 -0.0007 +0.0000 +0.0003
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0006 -0.0007 -0.0002 -0.0006 +0.0003 +0.0000 -0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0003 -0.0009 +0.0005 -0.0013 -0.0003 -0.0002 -0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0019 -0.0016 -0.0000 +0.0003 +0.0010 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0008 -0.0014 -0.0010 -0.0002 -0.0000 +0.0000 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0018 -0.0017 +0.0002 -0.0003 -0.0005 +0.0003 +0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0018 -0.0009 +0.0002 +0.0011 +0.0016 +0.0009
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0001 0.0006 -0.0000 +0.0005
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0018
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 -0.0004 -0.0005 -0.0004 -0.0008 +0.0006 -0.0010 -0.0001
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0003
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0003 -0.0010 +0.0013 +0.0020 -0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0010 -0.0009 +0.0045 +0.0024 +0.0023 +0.0038 +0.0001
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0006 -0.0005 +0.0025 +0.0043 +0.0025 +0.0034 -0.0011
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0003 -0.0015 -0.0013 -0.0004 +0.0020 +0.0011 -0.0012
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0011 -0.0001 +0.0021 +0.0015 +0.0023 +0.0010
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0000 -0.0011 +0.0009 -0.0020 +0.0004 +0.0002 -0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0011 -0.0012 +0.0012 +0.0014 +0.0006 +0.0006 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0005 -0.0003 +0.0005 -0.0003 +0.0019 +0.0009 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0003 0.0003 +0.0042 +0.0043 +0.0000 +0.0055 +0.0000
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0020 -0.0007 -0.0005 +0.0005 +0.0017 +0.0024 +0.0013
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 -0.0013 -0.0005 +0.0064 -0.0005 +0.0008
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0027 0.0018 +0.0069 +0.0044 +0.0067 -0.0009
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0001 -0.0009 +0.0012 +0.0001 +0.0018 +0.0017 -0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0006 0.0014 +0.0027 +0.0038 +0.0026 +0.0025 +0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0004 -0.0002 +0.0011 +0.0021 +0.0033 -0.0006
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0001 0.0008 +0.0039 +0.0041 +0.0023 +0.0010
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 0.0002 0.0011 +0.0037 +0.0030 +0.0025 +0.0033 +0.0009
Seer_Astral_45_Entrapment -0.0023 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0007 0.0012 +0.0034 +0.0005
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0027

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0002
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0011 -0.0015 +0.0011 -0.0004
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0020 -0.0025 +0.0004 -0.0005
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0040 -0.0043 -0.0033 -0.0032 -0.0048 -0.0050 -0.0003
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0026 -0.0020 -0.0008 +0.0005 +0.0009 +0.0005 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0053 -0.0025 +0.0040 +0.0027 +0.0023 +0.0028
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0018 -0.0027 +0.0014 +0.0011 +0.0021 +0.0007 -0.0009
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0035 -0.0044 +0.0014 +0.0003 -0.0024 -0.0016 -0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0025 -0.0029 +0.0007 +0.0016 +0.0027 -0.0005
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0038 -0.0029 -0.0026 +0.0009
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0024
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0025 -0.0024 +0.0005 -0.0022 +0.0005 -0.0015 +0.0001
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0028
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0010 -0.0005 +0.0044 +0.0037 +0.0038 +0.0005
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0049 -0.0044 +0.0026 +0.0015 +0.0026 +0.0027 +0.0005
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0044 -0.0023 +0.0036 +0.0036 +0.0049 +0.0049 +0.0021
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0024 -0.0027 -0.0010 +0.0022 +0.0016 +0.0018 -0.0003
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0042 -0.0045 +0.0009 -0.0006 +0.0008 -0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0048 -0.0042 -0.0009 -0.0019 -0.0025 +0.0003 +0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0032 -0.0037 -0.0000 +0.0036 +0.0030 +0.0024 -0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0025 -0.0025 +0.0029 -0.0005 +0.0029 +0.0021 -0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0040 0.0000 +0.0053 +0.0076 +0.0034 +0.0064 -0.0040
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0030 -0.0036 +0.0006 +0.0006 -0.0010 -0.0023 -0.0006
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0000 -0.0007 +0.0020 -0.0007 +0.0078 -0.0007 -0.0008
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0033 0.0031 +0.0130 +0.0098 +0.0115 +0.0119 -0.0002
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0021 0.0028 +0.0064 +0.0068 +0.0014 +0.0049 +0.0007
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0030 -0.0022 -0.0002 -0.0021 +0.0029 +0.0039 +0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0015 -0.0004 +0.0038 -0.0075 -0.0024 -0.0003 -0.0019
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0012 0.0012 +0.0057 +0.0057 +0.0020 +0.0068 +0.0001
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0041 -0.0041 +0.0019 -0.0011 -0.0015 +0.0010 +0.0000
Seer_Astral_45_Entrapment -0.0049 -0.0008
Seer_Astral_single_Entrapment -0.0074 0.0016 0.0025 +0.0099 +0.0010
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0055

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0004
EWZ_2P_MBR_Exploris_Entrapment -0.0013 0.0005 0.0002 +0.0015 -0.0003
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0004 -0.0003 -0.0000 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0002 -0.0002 -0.0000 -0.0004 +0.0000 -0.0001 -0.0000
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0002 -0.0004 +0.0005 -0.0006 -0.0000 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0012 -0.0012 -0.0002 +0.0001 +0.0002 -0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0003 -0.0008 -0.0004 -0.0001 +0.0001 -0.0000 -0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0013 -0.0011 -0.0002 -0.0003 -0.0003 -0.0000 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0011 -0.0006 +0.0003 +0.0005 +0.0009 +0.0006
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0005 0.0007 +0.0004 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0002 0.0002 +0.0006 -0.0003 +0.0008 +0.0002 +0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0003
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0006 -0.0009 +0.0006 +0.0021 -0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0008 -0.0014 +0.0032 +0.0014 +0.0017 +0.0023 -0.0006
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 0.0006 -0.0002 +0.0018 +0.0027 +0.0023 +0.0024 -0.0009
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0000 -0.0007 -0.0009 -0.0002 +0.0020 +0.0016 -0.0007
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 -0.0005 +0.0012 +0.0005 +0.0011 +0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0003 -0.0009 +0.0005 -0.0012 +0.0003 -0.0001 -0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0007 -0.0008 +0.0012 +0.0012 +0.0008 +0.0007 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0006 -0.0006 -0.0001 -0.0008 +0.0006 +0.0002 -0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0013 0.0008 +0.0038 +0.0035 +0.0011 +0.0040 -0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0008 -0.0007 +0.0001 +0.0002 +0.0007 +0.0007 +0.0002
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0003 -0.0007 +0.0053 -0.0007 -0.0010
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0024 0.0017 +0.0054 +0.0039 +0.0047 -0.0007
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0001 -0.0002 +0.0017 +0.0002 +0.0018 +0.0011 -0.0003
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0009 0.0014 +0.0030 +0.0031 +0.0032 +0.0030 +0.0005
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0004 0.0005 -0.0013 +0.0009 +0.0021 +0.0001
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0001 0.0007 +0.0032 +0.0026 +0.0017 +0.0008
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0003 0.0001 +0.0019 +0.0016 +0.0009 +0.0014 +0.0005
Seer_Astral_45_Entrapment -0.0011 0.0001
Seer_Astral_single_Entrapment -0.0022 0.0007 0.0012 +0.0034 +0.0005
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0006
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0009 0.0001 +0.0012 -0.0008
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0012 -0.0013 +0.0003 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0024 -0.0026 -0.0024 -0.0023 -0.0028 -0.0028 -0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0017 -0.0012 -0.0004 +0.0002 +0.0009 +0.0006 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0020 -0.0013 +0.0023 +0.0021 +0.0017 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0008 +0.0029 +0.0014 +0.0017 +0.0005 -0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0019 +0.0018 +0.0016 -0.0006 -0.0004 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0021 +0.0002 +0.0006 +0.0016 +0.0002
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0011 -0.0008 -0.0003 +0.0003
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0014
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0012 -0.0013 +0.0013 -0.0019 +0.0004 +0.0003 -0.0001
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0016
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0008 -0.0001 +0.0036 +0.0022 +0.0031 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0031 -0.0032 +0.0017 +0.0024 +0.0026 +0.0011 -0.0001
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0032 -0.0020 +0.0024 +0.0013 +0.0020 +0.0011 +0.0011
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0021 -0.0010 +0.0015 +0.0025 +0.0030 +0.0030 +0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0041 -0.0040 +0.0008 -0.0009 +0.0002 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0023 -0.0027 +0.0005 -0.0013 -0.0012 -0.0001 -0.0004
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0025 -0.0030 -0.0008 +0.0016 +0.0008 +0.0003 -0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0017 -0.0021 +0.0017 -0.0003 +0.0017 +0.0008 -0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0021 0.0013 +0.0052 +0.0054 +0.0033 +0.0044 -0.0008
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0015 -0.0034 -0.0021 -0.0002 -0.0031 -0.0034 -0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0011 0.0008 +0.0068 +0.0089 +0.0054 +0.0008 -0.0004
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0028 0.0017 +0.0117 +0.0085 +0.0072 +0.0064 -0.0011
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0015 0.0026 +0.0066 +0.0062 +0.0034 +0.0054 +0.0011
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0016 -0.0001 +0.0018 -0.0002 +0.0042 +0.0043 +0.0015
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0010 0.0008 +0.0040 -0.0058 -0.0020 +0.0005 -0.0002
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0007 0.0000 +0.0020 +0.0022 -0.0009 +0.0028 +0.0007
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0024 -0.0028 -0.0005 -0.0011 -0.0006 -0.0000 -0.0004
Seer_Astral_45_Entrapment -0.0029 -0.0003
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0025 +0.0099 +0.0006
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0016

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 4243 1050 -23345 -3193

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 195 84 -687 -111

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0460 0.0800 +0.0484 +0.0340

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -196 -70 -914 +126

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -57 -86 -276 -29

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 13 13 +4 +1 +1 -2 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 12 12 +4 +0 +1 -2 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1659 0.1661 +0.0202 +0.0240 +0.0260 +0.0287 +0.0002
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1576 0.1578 +0.0185 +0.0216 +0.0227 +0.0254 +0.0002
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1599 0.1620 +0.0165 +0.0196 +0.0212 +0.0022
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1482 0.1482 -0.0049 +0.0073 +0.0106 +0.0126 -0.0001
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1725 0.1725 +0.0027 +0.0086 +0.0109 +0.0126 -0.0000
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1494 0.1482 -0.0021 +0.0116 +0.0145 +0.0159 -0.0012
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1081
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1535 0.1532 +0.0052 +0.0033 +0.0037 +0.0027 -0.0004
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1555
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5779 0.5780 -0.0089 +0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1810 0.1791 +0.0075 -0.0018

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0844 +0.0081 +0.0105 +0.0117 +0.0123 -0.0000
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0809 +0.0086 +0.0106 +0.0110 +0.0121 +0.0004
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0756 0.0747 +0.0074 +0.0087 +0.0089 -0.0009
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0657 0.0646 -0.0132 +0.0043 +0.0053 +0.0057 -0.0012
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0802 0.0814 +0.0022 +0.0058 +0.0061 +0.0042 +0.0012
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0642 0.0645 -0.0125 +0.0078 +0.0077 +0.0077 +0.0003
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0474
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0998 0.0996 -0.0033 -0.0024 -0.0041 -0.0031 -0.0002
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1030
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5761 0.5762 -0.0120 +0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1350 0.1311 +0.0078 -0.0038

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0052 -0.0039 -0.0020 +0.0070 +0.0012 -0.0725 -0.0012
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0161 -0.0166 -0.0076 +0.0055 -0.0002 -0.0248 +0.0006
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0067 -0.0065 +0.0007 -0.0023 -0.0001 +0.0058 -0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0705 -0.0699 +0.0012 -0.0008 +0.0020 -0.0564 -0.0006
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0716 -0.0713 -0.0054 -0.0006 -0.0003 -0.0005 -0.0004
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0583 -0.0584 -0.0080 +0.0050 -0.0016 +0.0292 +0.0001
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0463 +0.0114 +0.0329 -0.0052 -0.0498
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1797 +0.0115 +0.0151 +0.0011 -0.0494
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1821 -0.0082 +0.0282 -0.0195 +0.1623
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0332 +0.0067 +0.0305 +0.0014 -0.0091
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3262 +0.0081 +0.0093 -0.0002 -0.0167
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1244 -0.0024 -0.0402 -0.0016 +0.0909
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1228 +0.0108 -0.0145 +0.0012 +0.0497
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2177 +0.0015 +0.0038 -0.0038 -0.0101
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2358 +0.0262 -0.0191 +0.0011 +0.0335
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1383 0.1354 -0.0059 -0.0059 +0.0211 -0.0981 -0.0029
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0841 -0.0849 +0.0062 +0.0047 -0.0191 +0.0236 +0.0008
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2011 0.1984 +0.0183 -0.0240 +0.0287 -0.0775 -0.0027
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1041 0.1042 +0.0048 -0.0054 -0.0067 +0.0159 +0.0001
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0483 -0.0482 +0.0009 +0.0001 -0.0089 +0.0027 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2152 0.2152 +0.0051 -0.0017 +0.0004 +0.0116 -0.0000
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1434 0.1433 -0.0032 -0.0062 -0.0160 +0.1209 -0.0001
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0805 -0.0804 +0.0043 -0.0045 -0.0054 -0.0215 -0.0000
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0443 0.0431 +0.0169 -0.0238 +0.0355 -0.0522 -0.0012
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0359 +0.0195 +0.0041 +0.0006 -0.0414
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0068 -0.0031 +0.0125 +0.0006 -0.0613
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0315 -0.0051 -0.0071 +0.0012 +0.0279
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0772 +0.0119 -0.0026 -0.0002 +0.0347
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0870 -0.0238 +0.0049 +0.0003 +0.0251
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0149 -0.0331 +0.0073 +0.0004 -0.0081
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0642 +0.0109 -0.0100 -0.0011 +0.0559
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1531 -0.0356 -0.0145 +0.0024 +0.0943
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1029 -0.0468 -0.0064 -0.0010 +0.0660

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0014 -0.0017 +0.0009 +0.0076 -0.0005 -0.0719 +0.0003
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0158 -0.0167 -0.0089 +0.0045 +0.0004 -0.0253 +0.0009
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0046 0.0045 +0.0054 -0.0044 +0.0010 +0.0010 -0.0001
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0722 -0.0734 +0.0013 +0.0005 -0.0055 -0.0485 +0.0012
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0690 -0.0692 -0.0060 -0.0005 -0.0005 -0.0011 +0.0001
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0497 -0.0496 -0.0084 +0.0078 -0.0007 +0.0187 -0.0001
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0546 +0.0142 +0.0365 -0.0057 -0.0357
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1322 +0.0050 +0.0043 -0.0072 -0.0313
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1925 -0.0338 -0.0246 +0.0154 +0.1754
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0273 +0.0064 +0.0290 +0.0021 -0.0252
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.2958 +0.0072 +0.0066 -0.0010 -0.0098
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1147 +0.0002 -0.0402 -0.0012 +0.0859
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1077 +0.0124 -0.0135 -0.0021 +0.0566
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1931 -0.0003 +0.0009 -0.0042 -0.0026
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2036 +0.0289 -0.0188 +0.0012 +0.0234
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1523 0.1512 -0.0077 -0.0028 +0.0144 -0.0688 -0.0010
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0802 -0.0796 +0.0048 +0.0016 -0.0170 +0.0245 -0.0006
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2447 0.2284 +0.0504 -0.0481 +0.0073 -0.0207 -0.0164
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0997 0.1004 +0.0031 -0.0032 -0.0081 +0.0238 +0.0007
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0442 -0.0444 +0.0011 -0.0008 -0.0084 +0.0021 +0.0003
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2259 0.2248 +0.0036 -0.0008 +0.0016 +0.0226 -0.0011
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1368 0.1387 +0.0005 -0.0096 -0.0297 +0.1322 +0.0019
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0812 -0.0793 +0.0056 -0.0034 -0.0033 -0.0273 -0.0019
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0451 0.0504 +0.0405 -0.0089 +0.0322 -0.0721 +0.0053
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0508 +0.0258 +0.0029 -0.0003 -0.0192
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0195 -0.0049 +0.0142 +0.0054 -0.0483
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0278 -0.0001 -0.0108 +0.0000 +0.0237
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0823 +0.0137 -0.0048 +0.0001 +0.0416
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0975 -0.0232 +0.0027 +0.0012 +0.0349
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0165 -0.0350 +0.0076 +0.0002 -0.0052
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0625 +0.0131 -0.0109 +0.0003 +0.0509
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1576 -0.0435 -0.0160 +0.0023 +0.0997
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0949 -0.0508 -0.0078 +0.0009 +0.0506

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1284 0.1274 +0.0343 +0.0202 -0.0086 -0.1794 -0.0010
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1132 0.1131 +0.0169 -0.0058 +0.0004 -0.0967 -0.0000
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1183 0.1183 +0.0117 -0.0078 +0.0011 -0.1425 -0.0000
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1351 0.1356 +0.0441 -0.0007 -0.0136 -0.1629 +0.0004
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1272 0.1279 +0.0164 -0.0031 -0.0002 -0.0921 +0.0007
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1304 0.1309 +0.0170 -0.0063 +0.0017 -0.1376 +0.0005
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1697 +0.0354 +0.0384 -0.0420 -0.4060
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2110 +0.0422 -0.0321 -0.0167 -0.1391
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.2674 +0.2175 -0.0279 -0.1166 -0.9737
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1382 +0.0427 +0.0074 -0.0036 -0.1182
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2290 +0.0473 +0.0030 -0.0078 -0.1066
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1796 +0.0549 +0.0262 -0.0056 -0.2005
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1406 +0.0358 +0.0129 -0.0110 -0.1909
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1919 +0.0274 +0.0045 -0.0018 -0.0934
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1930 +0.0778 +0.0001 -0.0169 -0.3454
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1958 0.1935 +0.0445 +0.0761 -0.1281 -0.3750 -0.0023
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0492 0.0471 -0.0103 +0.0134 -0.0147 -0.1021 -0.0021
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3063 0.2947 -0.0030 +0.1483 +0.0078 -0.6512 -0.0115
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1847 0.1827 +0.0037 +0.0045 +0.0051 -0.1658 -0.0020
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0428 0.0426 +0.0676 -0.0087 -0.0168 -0.1090 -0.0002
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1837 0.1822 +0.0316 +0.0062 -0.0049 -0.1517 -0.0015
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.1949 0.1938 -0.0093 +0.0378 -0.0706 -0.3819 -0.0012
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0558 0.0576 +0.0977 -0.0155 +0.0159 -0.1921 +0.0018
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3441 0.3465 +0.0737 +0.1982 -0.0827 -0.9310 +0.0024
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1128 +0.0321 -0.0450 -0.0051 -0.3698
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1402 +0.0200 -0.0293 -0.0344 -0.4017
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0827 +0.0068 -0.0387 -0.0080 -0.0240
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0890 +0.0190 -0.0584 -0.0028 -0.0630
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0969 +0.0281 -0.0478 -0.0031 -0.0975
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0911 +0.0273 -0.0601 -0.0037 -0.0429
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0862 +0.0130 -0.0614 -0.0008 -0.0988
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1327 +0.0619 -0.0455 -0.0143 -0.4413
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1026 +0.0688 -0.0494 -0.0103 -0.3946

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0526 0.0540 +0.0149 -0.0182 -0.0054 -0.0682 +0.0014
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0355 0.0346 +0.0035 +0.0005 +0.0043 -0.0460 -0.0009
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0472 0.0475 -0.0157 -0.0104 +0.0083 -0.0650 +0.0002
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0448 0.0449 -0.0042 +0.0002 -0.0084 -0.0748 +0.0002
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0378 0.0381 +0.0032 -0.0030 +0.0035 -0.0338 +0.0003
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0515 0.0529 +0.0000 +0.0073 -0.0081 -0.0740 +0.0015
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0537 +0.0402 -0.0136 +0.0467 -0.2120
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0781 +0.0316 -0.0208 -0.0112 -0.0304
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1646 +0.1306 -0.0136 -0.0647 -0.2282
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0228 +0.0032 +0.0034 -0.0021 -0.0237
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0498 +0.0110 -0.0047 +0.0013 -0.0126
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0250 +0.0055 -0.0000 +0.0038 -0.0370
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0295 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0428 +0.0015 +0.0006 +0.0010 -0.0086
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0375 +0.0296 -0.0022 -0.0025 -0.0832
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0494 0.0466 +0.0146 +0.0452 -0.0355 -0.1783 -0.0029
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0216 0.0209 -0.0057 -0.0062 -0.0031 -0.0270 -0.0008
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0692 0.0702 -0.1294 +0.1626 +0.0090 -0.4313 +0.0009
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0365 0.0360 -0.0046 +0.0074 +0.0016 -0.0326 -0.0005
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0092 0.0099 +0.0109 -0.0066 +0.0090 -0.0341 +0.0007
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0363 0.0362 -0.0053 +0.0093 +0.0025 -0.0461 -0.0000
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0789 0.0696 -0.0166 +0.0170 -0.0166 -0.1386 -0.0092
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0201 0.0208 +0.0068 -0.0006 -0.0039 -0.0537 +0.0007
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.0961 0.1296 -0.0891 -0.0032 -0.0082 -0.3343 +0.0335
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0536 +0.0682 -0.0593 -0.0056 -0.1687
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0860 +0.0668 -0.0849 -0.0031 -0.1575
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0343 +0.0113 -0.0357 +0.0198 -0.0185
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0277 -0.0054 -0.0154 +0.0040 -0.0211
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0274 -0.0011 -0.0225 +0.0112 -0.0334
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0254 +0.0094 -0.0181 -0.0013 -0.0203
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0385 -0.0134 -0.0199 -0.0090 -0.0289
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0559 +0.0271 -0.0671 +0.0055 -0.2033
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0367 +0.0501 -0.0498 +0.0220 -0.2387

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 167.2300
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 22.3200 18.0700 -6 +0.7500 -1.8000 +0.9400 -4.2500 -24.9273% +4.3303% -9.0589% +5.4874% -19.0412%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 10.6600 11.0700 -1.6800 +2 +2.7100 +1.7800 +0.4100 -13.1765% +22.0507% +32.4163% +19.1604% +3.8462%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 11.0700 11.5800 -0.7300 +2.6200 +1.9200 +0.7700 +0.5100 -5.9301% +29.2411% +19.8758% +7.1230% +4.6070%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 5.2100 5.1500 +0.9200 +0.7400 +0.2100 -0.0600 +21.7494% +16.7800% +4.2510% -1.1516%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.8500 5.8100 +0.4300 +1.4300 +1.0600 +1.2700 -0.0400 +7.9926% +32.6484% +22.3158% +27.9736% -0.6838%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 5.7700 5.1600 -0.2700 +1.0200 +0.7200 +0.5000 -0.6100 -4.9724% +24.6377% +16.2162% +10.7296% -10.5719%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 5.5600 5.4200 -0.1300 +1 +0.8900 +0.9600 -0.1400 -2.3423% +22.6244% +19.6468% +21.5247% -2.5180%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 62
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 18.5200 17.6100 -10.0500 -2.1500 -0.7100 -1.6700 -0.9100 -36.3341% -10.8806% -3.8755% -8.6618% -4.9136%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 19.5400
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.2600 4.9500 -0.8400 +0.3600 +0.3000 +0.8600 -0.3100 -14.5078% +7.8431% +6.4516% +21.0269% -5.8935%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4300 5.2300 -1.0300 +0.8300 -0.6500 -0.2000 -16.4537% +18.8636% -11.0544% -3.6832%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 5.3300 4.9300 +0.4100 +1.2000 +0.1300 +1.2900 -0.4000 +9.0708% +32.1716% +2.7083% +35.4396% -7.5047%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.3100 4.2300 -1.5100 +0.7200 +0.3100 +0.7900 -0.0800 -26.3066% +20.5128% +7.9082% +22.9651% -1.8561%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 6.6000 6.5000 -0.5700 +0.9700 +0.9900 +0.7600 -0.1000 -8.0622% +17.5407% +17.9673% +13.2404% -1.5152%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 6.5100 6.4100 -1.1800 +0.6800 +0.2700 +0.8700 -0.1000 -15.5468% +11.8674% +4.3974% +15.7040% -1.5361%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.7300 5.7300 -0.7200 +1.0600 +1.4300 +1.3200 +0 -11.1628% +22.6981% +33.2558% +29.9320% +0%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 6.2400 6.3500 -1.0300 +1.4200 +1.7200 +0.7300 +0.1100 -13.9566% +28.8032% +37.1490% +12.9893% +1.7628%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.6500 20.2200 +15.4800 +16.5600 +16.8300 +15.5700 +326.5823% +452.4590% +496.4602% +334.8387%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.5400 4.5800 -0.6800 +0.7400 +0.8200 +0.0400 -12.9278% +19.2708% +21.8085% +0.8811%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 4.2700 4.0400 -0.6100 +0.6100 +0.3300 +0.5900 -0.2300 -13.1183% +17.7843% +8.8949% +17.1014% -5.3864%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.5600 4.5400 +0.3700 +1.2500 +0.8500 +1.2700 -0.0200 +8.8729% +37.9939% +23.0352% +38.8379% -0.4386%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.5600 4.6900 -0.5900 +1.1600 +1.0900 +1.2000 +0.1300 -11.1742% +32.8612% +30.2778% +34.3840% +2.8509%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 5.0900 5.1100 -0.4000 +1.2900 +0.9600 +0.3000 +0.0200 -7.2595% +33.7696% +23.1325% +6.2370% +0.3929%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.6500 4.6700 -0.0600 +1.2100 +1.1000 +0.0200 -1.2685% +34.9711% +30.8123% +0.4301%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.9900 4.8400 +0.1900 +1.2200 +1.1100 +1.0600 -0.1500 +4.0860% +33.7017% +29.7587% +28.0423% -3.0060%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.6600 7.5600 -1.4800 +1.0100 +1.4600 -0.1000 -16.3717% +15.4198% +23.9344% -1.3055%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 76.1500
Seer_Astral_single 4.4700 4.1400 5.5800 5.9400 4.8900 +0.4200 +0.7500 -0.6900 -1.0500 +9.3960% +18.1159% -12.3656% -17.6768%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 212.7700
EWZ_2P_MBR_Exploris 26.1800 27.7200 25.4500 -0.7300 -2.2700 -2.7884% -8.1890%
EWZ_2P_MBR_Exploris_Human 12.9100 15.6300 14.4600 +1.5500 -1.1700 +12.0062% -7.4856%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 15.6400 16.5100 +4.4500 +0.8700 +36.8988% +5.5627%
MacCoss_Eclipse_Normalization_noNorm 27.5100 39.3900 39.4200 +11.9100 +0.0300 +43.2933% +0.0762%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 38.1100 40.6200 +12.9500 +2.5100 +46.8016% +6.5862%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png