Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909 6280419 +781083 -1493093 -1457338 +51512 +51510 +14.2032% -19.2074% -18.8341% +0.8270% +0.8270%
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1214362 +117868 -92643 -97593 -79179 -79179 +10.7495% -7.0882% -7.4387% -6.1211% -6.1211%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 565965 -20357 -49797 -44745 -33916 -33916 -3.4720% -8.0871% -7.3267% -5.6538% -5.6538%
MTAC_3P_Standard 596590 623022 617574 607435 607435 578981 -17609 -44041 -38593 -28454 -28454 -2.9516% -7.0689% -6.2491% -4.6843% -4.6843%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 137209 -339 +370 +1649 +1649 -0.2465% +0.2704% +1.2164% +1.2164%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 158351 +2710 +1800 +1842 +3316 +3507 +1.7412% +1.1498% +1.1769% +2.1389% +2.2649%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 139744 +1235 +359 +452 +1859 +1957 +0.8916% +0.2576% +0.3245% +1.3482% +1.4203%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 159378 +416 +646 +218 +1456 +1456 +0.2617% +0.4070% +0.1370% +0.9220% +0.9220%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373 3270384 -11699 -490448 -443751 -367988 -367989 -0.3565% -13.0409% -11.9476% -10.1141% -10.1141%
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1214242 +191506 +59573 +90369 +30158 +30158 +18.7249% +5.1593% +8.0409% +2.5469% +2.5469%
SCIEX_3P 672242 749525 722698 714454 714454 724384 +52142 -25141 +1686 +9930 +9930 +7.7564% -3.3543% +0.2333% +1.3899% +1.3899%
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 47881 +6999 +6181 +5456 +5781 +5781 +17.1200% +14.8225% +12.8603% +13.7316% +13.7316%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 46142 +5073 +3740 +4119 +4990 +4990 +12.3524% +8.8203% +9.8018% +12.1258% +12.1258%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 36623 +27883 +13508 +13608 +13710 +13710 +319.0275% +58.4382% +59.1267% +59.8350% +59.8350%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 25591 +8656 +8038 +7182 +7243 +7243 +51.1131% +45.7927% +39.0135% +39.4757% +39.4757%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 107626 +7718 +4735 +8643 +8978 +8978 +7.7251% +4.6020% +8.7318% +9.1010% +9.1010%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 75935 +4837 +3207 +4490 +4809 +4809 +6.8033% +4.4096% +6.2846% +6.7612% +6.7612%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 116349 +10645 +9852 +10727 +11915 +11837 +10.0706% +9.2510% +10.1560% +11.4091% +11.3260%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 120679 +5522 +3363 +6357 +7598 +7429 +4.7952% +2.8666% +5.5606% +6.7191% +6.5598%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 15455 +5261 +4649 +4217 +4222 +4222 +51.6088% +43.0224% +37.5245% +37.5857% +37.5857%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 17349 +2542 +1916 +1308 +1650 +1650 +17.1676% +12.4150% +8.1541% +10.5102% +10.5102%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 6084 +4823 +4052 +3634 +3698 +3698 +382.4742% +199.4094% +148.3265% +154.9874% +154.9874%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 11077 +9641 +6294 +5387 +5346 +5346 +671.3788% +131.5911% +94.6749% +93.2821% +93.2821%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 28141 +6431 +6246 +5561 +5678 +5678 +29.6223% +28.5271% +24.6280% +25.2771% +25.2771%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 27895 +2035 +1752 +1635 +2270 +2270 +7.8693% +6.7016% +6.2262% +8.8585% +8.8585%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 15460 +11976 +8562 +8626 +8626 +343.7428% +124.1229% +126.2218% +126.2218%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 23294 +12595 +11820 +10412 +10405 +10405 +117.7213% +103.0155% +80.8260% +80.7278% +80.7278%
SCP_Astral_MBR 92167 93585 91884 90864 90838 97963 +5796 +4378 +6079 +7099 +7125 +6.2886% +4.6781% +6.6160% +7.8128% +7.8436%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207 2845185 +332448 -278821 -290312 -126022 -126022 +13.2305% -8.9251% -9.2589% -4.2414% -4.2414%
Seer_Astral_single 56699 55793 55891 55891 55431 -1268 -362 -460 -460 -2.2364% -0.6488% -0.8230% -0.8230%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526 17132642 +1044368 -3261145 -2067148 -480804 -493884 +6.4915% -15.9909% -10.7665% -2.7298% -2.8019%
EWZ_2P_MBR_Exploris 1776128 1775346 1778359 +2231 +3013 +0.1256% +0.1697%
EWZ_2P_MBR_Exploris_Human 836809 836809 839583 +2774 +2774 +0.3315% +0.3315%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 915655 +731 +1706 +0.0799% +0.1867%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2102869 +24835 +24833 +1.1951% +1.1950%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2098020 +19986 +19984 +0.9618% +0.9617%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990 96534 -149634 -334240 -300679 -252399 -252456 -60.7853% -77.5906% -75.6972% -72.3345% -72.3390%
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 134043 +22539 +424 +2684 +2012 +2012 +20.2136% +0.3173% +2.0433% +1.5239% +1.5239%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 110256 +1989 -7096 -4403 -4560 -4560 +1.8371% -6.0468% -3.8401% -3.9716% -3.9716%
MTAC_3P_Standard 110265 118693 115800 116148 116148 111545 +1280 -7148 -4255 -4603 -4603 +1.1608% -6.0223% -3.6744% -3.9630% -3.9630%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 50945 +2087 +1913 +1950 +1950 +4.2716% +3.9015% +3.9800% +3.9800%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 58340 +4371 +3265 +2500 +2456 +2519 +8.0991% +5.9283% +4.4771% +4.3948% +4.5126%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 52509 +3888 +2844 +2220 +2049 +2094 +7.9965% +5.7264% +4.4145% +4.0606% +4.1535%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 58572 +3512 +2653 +1865 +1745 +1745 +6.3785% +4.7444% +3.2888% +3.0707% +3.0707%
Olsen_Astral_3P 198770 231103 234505 234149 234149 225918 +27148 -5185 -8587 -8231 -8231 +13.6580% -2.2436% -3.6618% -3.5153% -3.5153%
Olsen_Exploris_3P 51272 58784 55047 58593 58565 63117 +11845 +4333 +8070 +4524 +4552 +23.1023% +7.3711% +14.6602% +7.7211% +7.7726%
SCIEX_3P 82206 93920 87927 87858 87858 96368 +14162 +2448 +8441 +8510 +8510 +17.2275% +2.6065% +9.6000% +9.6861% +9.6861%
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 17768 +3328 +2810 +2519 +2061 +2061 +23.0471% +18.7859% +16.5191% +13.1215% +13.1215%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 16919 +2436 +1854 +2003 +1849 +1847 +16.8197% +12.3067% +13.4285% +12.2694% +12.2545%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 14373 +5633 +4997 +4984 +5009 +4988 +64.4508% +53.2956% +53.0834% +53.4921% +53.1486%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 14327 +5429 +5068 +4543 +4517 +4517 +61.0137% +54.7359% +46.4330% +46.0449% +46.0449%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 38584 +3719 +2287 +4242 +4159 +4159 +10.6669% +6.3008% +12.3522% +12.0813% +12.0813%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 27574 +2925 +2108 +2455 +2351 +2351 +11.8666% +8.2777% +9.7735% +9.3209% +9.3209%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 42461 +5773 +4785 +4812 +5040 +5002 +15.7354% +12.7004% +12.7812% +13.4684% +13.3533%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 43205 +3049 +1660 +3162 +3312 +3259 +7.5929% +3.9957% +7.8965% +8.3022% +8.1585%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 6030 +2364 +2081 +1821 +1784 +1784 +64.4845% +52.6969% +43.2644% +42.0160% +42.0160%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 6708 +1409 +1097 +853 +642 +641 +26.5899% +19.5509% +14.5687% +10.5836% +10.5654%
SCP_Astral_250pg_3ms 675 721 908 879 879 2716 +2041 +1995 +1808 +1837 +1837 +302.3704% +276.6990% +199.1189% +208.9875% +208.9875%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 4445 +3009 +2707 +2300 +2282 +2280 +209.5404% +155.7537% +107.2261% +105.5016% +105.3118%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 10705 +2911 +2733 +2453 +2299 +2297 +37.3492% +34.2825% +29.7261% +27.3495% +27.3192%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 10362 +1204 +1020 +991 +948 +947 +13.1470% +10.9184% +10.5752% +10.0701% +10.0584%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 6620 +4774 +4020 +4034 +4031 +258.6132% +154.6154% +155.9938% +155.6972%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 9060 +5186 +4905 +4286 +4255 +4256 +133.8668% +118.0505% +89.7780% +88.5536% +88.5928%
SCP_Astral_MBR 24110 24991 24570 24544 24527 26641 +2531 +1650 +2071 +2097 +2114 +10.4977% +6.6024% +8.4290% +8.5438% +8.6191%
Seer_Astral_45 69584 90103 87204 87620 87624 82644 +13060 -7459 -4560 -4976 -4980 +18.7687% -8.2783% -5.2291% -5.6791% -5.6834%
Seer_Astral_single 56699 55793 55891 55891 55431 -1268 -362 -460 -460 -2.2364% -0.6488% -0.8230% -0.8230%
YEAST_KO_Astral 66823 87888 87428 86498 86777 81009 +14186 -6879 -6419 -5489 -5768 +21.2292% -7.8270% -7.3420% -6.3458% -6.6469%
EWZ_2P_MBR_Exploris 55271 55147 55440 +169 +293 +0.3058% +0.5313%
EWZ_2P_MBR_Exploris_Human 48465 48473 48853 +388 +380 +0.8006% +0.7839%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 51601 +355 +424 +0.6927% +0.8285%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 72502 -776 -775 -1.0590% -1.0576%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 72502 -776 -775 -1.0590% -1.0576%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383 589615 -13663 -135326 -140949 -47850 -59768 -2.2648% -18.6672% -19.2932% -7.5063% -9.2038%
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 87096 -824 -5792 -6886 -6345 -7190 -0.9372% -6.2355% -7.3269% -6.7904% -7.6257%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 62620 -1153 -1354 -991 -395 -3215 -1.8080% -2.1165% -1.5579% -0.6268% -4.8834%
MTAC_3P_Standard 64317 64464 64219 63385 65967 62928 -1389 -1536 -1291 -457 -3039 -2.1596% -2.3827% -2.0103% -0.7210% -4.6068%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12380 +313 +410 +440 +141 +2.5939% +3.4252% +3.6851% +1.1521%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 12691 +259 +220 +329 +363 +31 +2.0833% +1.7641% +2.6614% +2.9445% +0.2449%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12271 +263 +224 +311 +303 +91 +2.1902% +1.8594% +2.6003% +2.5318% +0.7471%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 12793 +232 +328 +316 +383 +19 +1.8470% +2.6314% +2.5327% +3.0862% +0.1487%
Olsen_Astral_3P 236395 245756 242430 240719 247368 233700 -2695 -12056 -8730 -7019 -13668 -1.1400% -4.9057% -3.6010% -2.9158% -5.5254%
Olsen_Exploris_3P 146224 153534 153990 155827 157286 147109 +885 -6425 -6881 -8718 -10177 +0.6052% -4.1847% -4.4685% -5.5947% -6.4704%
SCIEX_3P 70810 74366 72157 71550 73429 71713 +903 -2653 -444 +163 -1716 +1.2752% -3.5675% -0.6153% +0.2278% -2.3370%
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 10321 +1158 +793 +736 +987 +299 +12.6378% +8.3228% +7.6787% +10.5742% +2.9834%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 10302 +1004 +541 +890 +749 +313 +10.7980% +5.5425% +9.4560% +7.8405% +3.1334%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 8214 +5764 +2130 +1967 +2098 +1865 +235.2653% +35.0099% +31.4871% +34.3035% +29.3747%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 5917 +1214 +1329 +959 +994 +968 +25.8133% +28.9669% +19.3425% +20.1909% +19.5595%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 16737 +547 +457 +712 +682 +201 +3.3786% +2.8071% +4.4431% +4.2479% +1.2155%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 13954 +355 +113 +266 +283 -30 +2.6105% +0.8164% +1.9433% +2.0701% -0.2145%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17155 +903 +879 +1038 +1230 +697 +5.5562% +5.4006% +6.4404% +7.7237% +4.2350%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 17673 +656 +495 +760 +928 +324 +3.8550% +2.8816% +4.4936% +5.5420% +1.8675%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 4606 +959 +693 +742 +1067 +792 +26.2956% +17.7102% +19.2029% +30.1498% +20.7656%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5030 +730 +427 +233 +53 -139 +16.9767% +9.2766% +4.8572% +1.0649% -2.6891%
SCP_Astral_250pg_3ms 576 22 936 741 736 2088 +1512 +2066 +1152 +1347 +1352 +262.5000% +9390.9091% +123.0769% +181.7814% +183.6957%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 3244 +2607 +1164 +1215 +1198 +1176 +409.2622% +55.9615% +59.8817% +58.5533% +56.8665%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7324 +1079 +978 +1308 +1197 +1105 +17.2778% +15.4113% +21.7420% +19.5365% +17.7681%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7279 +557 +550 +267 +256 -63 +8.2862% +8.1736% +3.8078% +3.6452% -0.8581%
SCP_Astral_500pg_3ms 982 2365 2177 2236 4550 +3568 +2185 +2373 +2314 +363.3401% +92.3890% +109.0032% +103.4884%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 6071 +2363 +2064 +2026 +2153 +1968 +63.7271% +51.5099% +50.0865% +54.9515% +47.9649%
SCP_Astral_MBR 20165 20129 20074 19793 19898 19492 -673 -637 -582 -301 -406 -3.3375% -3.1646% -2.8993% -1.5207% -2.0404%
Seer_Astral_45 225377 241455 241952 237727 242898 226074 +697 -15381 -15878 -11653 -16824 +0.3093% -6.3701% -6.5625% -4.9018% -6.9264%
Seer_Astral_single 4685 4700 4632 4739 4638 -47 -62 +6 -101 -1.0032% -1.3191% +0.1295% -2.1313%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667 1341706 +40870 -46557 +14242 +40006 +3039 +3.1418% -3.3536% +1.0729% +3.0734% +0.2270%
EWZ_2P_MBR_Exploris 245259 247422 235419 -9840 -12003 -4.0121% -4.8512%
EWZ_2P_MBR_Exploris_Human 115447 117345 110591 -4856 -6754 -4.2063% -5.7557%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 124361 -4607 -6345 -3.5722% -4.8544%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 185114 +6940 +1571 +3.8951% +0.8559%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 185015 +6841 +1472 +3.8395% +0.8020%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514 6035 -15705 -22505 -21492 -20362 -20479 -72.2401% -78.8542% -78.0761% -77.1376% -77.2384%
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 7989 +144 -186 -166 -214 -260 +1.8356% -2.2752% -2.0356% -2.6088% -3.1519%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 11394 +33 -100 +43 +56 -404 +0.2905% -0.8700% +0.3788% +0.4939% -3.4243%
MTAC_3P_Standard 11473 11560 11477 11396 11832 11412 -61 -148 -65 +16 -420 -0.5317% -1.2803% -0.5664% +0.1404% -3.5497%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4291 +163 +199 +191 +108 +3.9486% +4.8631% +4.6585% +2.5819%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4357 +142 +109 +139 +143 +20 +3.3689% +2.5659% +3.2954% +3.3935% +0.4611%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4241 +166 +107 +151 +144 +56 +4.0736% +2.5883% +3.6919% +3.5148% +1.3381%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4380 +131 +143 +136 +149 +26 +3.0831% +3.3750% +3.2045% +3.5216% +0.5972%
Olsen_Astral_3P 13820 14378 14293 14296 14611 14143 +323 -235 -150 -153 -468 +2.3372% -1.6344% -1.0495% -1.0702% -3.2031%
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7354 +99 -228 +14 -125 -183 +1.3646% -3.0071% +0.1907% -1.6713% -2.4280%
SCIEX_3P 8652 9109 8679 8618 8812 9102 +450 -7 +423 +484 +290 +5.2011% -0.0768% +4.8738% +5.6162% +3.2910%
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 3668 +423 +279 +257 +350 +107 +13.0354% +8.2325% +7.5344% +10.5485% +3.0048%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3647 +393 +214 +356 +213 +155 +12.0774% +6.2336% +10.8174% +6.2027% +4.4387%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3056 +606 +660 +606 +659 +622 +24.7347% +27.5459% +24.7347% +27.4927% +25.5546%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3135 +627 +699 +501 +493 +552 +25% +28.6946% +19.0205% +18.6601% +21.3705%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 5815 +236 +159 +311 +269 +161 +4.2301% +2.8112% +5.6504% +4.8503% +2.8475%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 4886 +165 +48 +103 +75 +42 +3.4950% +0.9921% +2.1535% +1.5589% +0.8671%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6039 +428 +384 +443 +486 +326 +7.6279% +6.7905% +7.9164% +8.7520% +5.7063%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6108 +262 +159 +265 +303 +143 +4.4817% +2.6727% +4.5353% +5.2196% +2.3973%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 1717 +425 +293 +311 +429 +358 +32.8947% +20.5758% +22.1195% +33.3075% +26.3429%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 1840 +272 +180 +82 -33 -30 +17.3469% +10.8434% +4.6644% -1.7619% -1.6043%
SCP_Astral_250pg_3ms 307 8 350 283 281 860 +553 +852 +510 +577 +579 +180.1303% +10650% +145.7143% +203.8869% +206.0498%
SCP_Astral_250pg_6ms 637 756 751 766 767 1235 +598 +479 +484 +469 +468 +93.8776% +63.3598% +64.4474% +61.2272% +61.0169%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2649 +442 +374 +480 +419 +432 +20.0272% +16.4396% +22.1300% +18.7892% +19.4858%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2591 +188 +203 +114 +52 -7 +7.8236% +8.5008% +4.6023% +2.0481% -0.2694%
SCP_Astral_500pg_3ms 525 902 828 835 1735 +1210 +833 +907 +900 +230.4762% +92.3503% +109.5411% +107.7844%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2232 +914 +785 +746 +797 +764 +69.3475% +54.2502% +50.2019% +55.5401% +52.0436%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4752 +44 +32 +40 +37 +36 +0.9346% +0.6780% +0.8489% +0.7847% +0.7634%
Seer_Astral_45 5802 6297 6122 6133 6246 5892 +90 -405 -230 -241 -354 +1.5512% -6.4316% -3.7569% -3.9296% -5.6676%
Seer_Astral_single 4685 4700 4632 4739 4638 -47 -62 +6 -101 -1.0032% -1.3191% +0.1295% -2.1313%
YEAST_KO_Astral 4565 4795 4676 4673 4783 4706 +141 -89 +30 +33 -77 +3.0887% -1.8561% +0.6416% +0.7062% -1.6099%
EWZ_2P_MBR_Exploris 7041 7106 6736 -305 -370 -4.3318% -5.2069%
EWZ_2P_MBR_Exploris_Human 6167 6284 5889 -278 -395 -4.5079% -6.2858%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 6627 -260 -336 -3.7752% -4.8255%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6041 +237 +86 +4.0834% +1.4442%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6041 +237 +86 +4.0834% +1.4442%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013 589614 -59399
KEAP1KO_Eclipse 94279 87089 -7190
MTAC_3P_Alternating 65832 62617 -3215
MTAC_3P_Standard 65967 62927 -3040
MTAC_Yeast_Alternating_3min 12239 12373 +134
MTAC_Yeast_Alternating_5min 12660 12691 +31
MTAC_Yeast_Standard_3min 12180 12266 +86
MTAC_Yeast_Standard_5min 12772 12789 +17
Olsen_Astral_3P 247364 233684 -13680
Olsen_Exploris_3P 157285 147109 -10176
SCIEX_3P 73429 71711 -1718
SCP_Astral_1000pg_12ms 10022 10320 +298
SCP_Astral_1000pg_24ms 9989 10302 +313
SCP_Astral_1000pg_3ms 6349 8213 +1864
SCP_Astral_1000pg_6ms 4949 5909 +960
SCP_Astral_10ng_12ms 16536 16733 +197
SCP_Astral_10ng_24ms 13982 13952 -30
SCP_Astral_10ng_3ms 16458 17151 +693
SCP_Astral_10ng_6ms 17349 17673 +324
SCP_Astral_250pg_12ms 3814 4606 +792
SCP_Astral_250pg_24ms 5169 5030 -139
SCP_Astral_250pg_3ms 736 2088 +1352
SCP_Astral_250pg_6ms 2066 3242 +1176
SCP_Astral_500pg_12ms 6219 7324 +1105
SCP_Astral_500pg_24ms 7342 7279 -63
SCP_Astral_500pg_3ms 2234 4549 +2315
SCP_Astral_500pg_6ms 4103 6069 +1966
SCP_Astral_MBR 19891 19492 -399
Seer_Astral_45 242898 226074 -16824
Seer_Astral_single 4739 4638 -101
YEAST_KO_Astral 1338667 1341706 +3039
EWZ_2P_MBR_Exploris 247422 235417 -12005
EWZ_2P_MBR_Exploris_Human 117340 110587 -6753
EWZ_2P_MBR_Exploris_YeastHuman 130702 124359 -6343
MacCoss_Eclipse_Normalization_noNorm 183540 185114 +1574
MacCoss_Eclipse_Normalization_yesNorm 183540 185015 +1475

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0017 -0.0006 -0.0006
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0019 +0.0007 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0009 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 -0.0018 -0.0006 -0.0004
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 23121 -1274 -1467

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 335 -436 -427

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0145 -0.0171 -0.0165

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 467 -377 +1096

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -30 -220 -86

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 11 +4 +1 +1 +0 -4
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 11 +4 +0 +1 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 10 +3 +0 +1 +0 -4
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 0 +0 +1 +0 +0 -2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1844 +0.0385 +0.0423 +0.0443 +0.0470 +0.0469
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1719 +0.0326 +0.0356 +0.0367 +0.0395 +0.0394
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1917 +0.0461 +0.0493 +0.0509 +0.0508
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1732 +0.0201 +0.0322 +0.0356 +0.0376 +0.0377
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1987 +0.0290 +0.0348 +0.0372 +0.0388 +0.0390
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1672 +0.0169 +0.0306 +0.0335 +0.0349 +0.0348
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833 0.1052 +0.0229 +0.0168 +0.0198 +0.0220 +0.0219
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1827 +0.0347 +0.0328 +0.0332 +0.0322 +0.0321
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184 0.1743 +0.0460 +0.0462 +0.0548 +0.0560 +0.0559
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.6155 +0.0286 +0.0285
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2374 +0.0657 +0.0656

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0939 +0.0176 +0.0200 +0.0212 +0.0219 +0.0181
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0873 +0.0150 +0.0170 +0.0174 +0.0185 +0.0155
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0864 +0.0191 +0.0204 +0.0206 +0.0177
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0744 -0.0034 +0.0141 +0.0151 +0.0156 +0.0143
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0893 +0.0101 +0.0137 +0.0140 +0.0121 +0.0118
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0727 -0.0043 +0.0160 +0.0158 +0.0159 +0.0143
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374 0.0489 +0.0115 +0.0116 +0.0122 +0.0126 +0.0115
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1187 +0.0158 +0.0167 +0.0150 +0.0160 +0.0154
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795 0.1094 +0.0230 +0.0262 +0.0308 +0.0309 +0.0300
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5932 +0.0050 +0.0052
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1417 +0.0184 +0.0171

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 -0.0695 -0.0020 +0.0070 +0.0012 +0.0000 -0.0082
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0214 -0.0076 +0.0055 -0.0002 -0.0001 -0.0194
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0232 +0.0007 -0.0023 -0.0001 -0.0000 +0.0224
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.1261 +0.0012 -0.0008 +0.0020 -0.0002 -0.0005
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0696 -0.0054 -0.0006 -0.0003 +0.0001 -0.0027
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0133 -0.0080 +0.0050 -0.0016 -0.0001 -0.0156
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 -0.0276 +0.0114 +0.0329 -0.0052 +0.0001 -0.0686
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 -0.2005 +0.0115 +0.0151 +0.0011 +0.0002 -0.0289
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 0.0957 -0.0082 +0.0282 -0.0195 +0.0005 +0.0755
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 0.0156 +0.0067 +0.0305 +0.0014 +0.0001 -0.0267
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 -0.3190 +0.0081 +0.0093 -0.0002 +0.0000 -0.0240
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 0.1163 -0.0024 -0.0402 -0.0016 -0.0001 +0.0830
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 0.1508 +0.0108 -0.0145 +0.0012 -0.0002 +0.0779
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 -0.1870 +0.0015 +0.0038 -0.0038 -0.0001 -0.0407
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 0.2940 +0.0262 -0.0191 +0.0011 -0.0004 +0.0920
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1727 -0.0059 -0.0059 +0.0211 -0.0012 -0.0625
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0661 +0.0062 +0.0047 -0.0191 -0.0001 +0.0057
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.2358 +0.0183 -0.0240 +0.0287 +0.0020 -0.0447
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1199 +0.0048 -0.0054 -0.0067 +0.0002 +0.0314
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0444 +0.0009 +0.0001 -0.0089 -0.0000 -0.0012
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2344 +0.0051 -0.0017 +0.0004 +0.0004 +0.0304
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1167 -0.0032 -0.0062 -0.0160 +0.0006 +0.0936
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0769 +0.0043 -0.0045 -0.0054 -0.0001 -0.0250
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 -0.0037 +0.0169 -0.0238 +0.0355 +0 -0.0927
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 -0.1125 +0.0195 +0.0041 +0.0006 +0.0003 +0.0349
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0609 -0.0031 +0.0125 +0.0006 -0.0005 -0.0067
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 0.0296 -0.0051 -0.0071 +0.0012 +0.0002 +0.0259
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 -0.0808 +0.0119 -0.0026 -0.0002 -0.0000 +0.0383
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0796 -0.0238 +0.0049 +0.0003 -0.0001 +0.0178
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0032 -0.0331 +0.0073 +0.0004 +0.0000 -0.0199
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 -0.0325 +0.0109 -0.0100 -0.0011 +0.0003 +0.0239
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0630 -0.0356 -0.0145 +0.0024 +0.0008 +0.0034
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0317 -0.0468 -0.0064 -0.0010 -0.0004 -0.0048

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 -0.0839 +0.0009 +0.0076 -0.0005 +0.0006 +0.0099
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0243 -0.0089 +0.0045 +0.0004 +0.0011 -0.0179
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0410 +0.0054 -0.0044 +0.0010 +0.0033 +0.0342
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.1589 +0.0013 +0.0005 -0.0055 +0.0004 +0.0378
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0694 -0.0060 -0.0005 -0.0005 -0.0005 -0.0003
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 0.0061 -0.0084 +0.0078 -0.0007 +0.0020 -0.0270
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 -0.0419 +0.0142 +0.0365 -0.0057 -0.0002 -0.0482
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 -0.1861 +0.0050 +0.0043 -0.0072 -0.0060 +0.0286
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 0.0666 -0.0338 -0.0246 +0.0154 -0.0097 +0.0591
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 0.0073 +0.0064 +0.0290 +0.0021 -0.0001 -0.0450
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 -0.3006 +0.0072 +0.0066 -0.0010 +0.0001 -0.0051
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 0.1019 +0.0002 -0.0402 -0.0012 -0.0002 +0.0733
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 0.1537 +0.0124 -0.0135 -0.0021 -0.0022 +0.1049
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.1749 -0.0003 +0.0009 -0.0042 +0.0009 -0.0217
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 0.2961 +0.0289 -0.0188 +0.0012 -0.0027 +0.1185
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.2069 -0.0077 -0.0028 +0.0144 -0.0004 -0.0138
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0678 +0.0048 +0.0016 -0.0170 -0.0057 +0.0178
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.3290 +0.0504 -0.0481 +0.0073 +0.0089 +0.0547
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1186 +0.0031 -0.0032 -0.0081 +0.0006 +0.0421
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0400 +0.0011 -0.0008 -0.0084 -0.0000 -0.0020
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2487 +0.0036 -0.0008 +0.0016 +0.0018 +0.0436
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.0962 +0.0005 -0.0096 -0.0297 +0.0070 +0.0846
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0865 +0.0056 -0.0034 -0.0033 +0.0038 -0.0257
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 -0.0152 +0.0405 -0.0089 +0.0322 +0.0276 -0.1296
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 -0.1262 +0.0258 +0.0029 -0.0003 -0.0025 +0.0588
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0928 -0.0049 +0.0142 +0.0054 -0.0021 +0.0272
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 0.0300 -0.0001 -0.0108 +0.0000 -0.0004 +0.0262
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 -0.0882 +0.0137 -0.0048 +0.0001 -0.0001 +0.0475
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0867 -0.0232 +0.0027 +0.0012 -0.0002 +0.0243
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 0.0004 -0.0350 +0.0076 +0.0002 -0.0001 -0.0212
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 -0.0335 +0.0131 -0.0109 +0.0003 +0.0016 +0.0202
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0461 -0.0435 -0.0160 +0.0023 +0.0005 -0.0122
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0122 -0.0508 -0.0078 +0.0009 +0.0008 -0.0330

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.2383 +0.0343 +0.0202 -0.0086 +0.0005 -0.0700
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1930 +0.0169 -0.0058 +0.0004 +0.0004 -0.0173
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.2200 +0.0117 -0.0078 +0.0011 -0.0001 -0.0407
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.2413 +0.0441 -0.0007 -0.0136 +0.0007 -0.0574
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1896 +0.0164 -0.0031 -0.0002 +0.0007 -0.0303
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1962 +0.0170 -0.0063 +0.0017 +0.0006 -0.0724
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 0.3219 +0.0354 +0.0384 -0.0420 -0.0006 -0.2532
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 0.2971 +0.0422 -0.0321 -0.0167 +0.0004 -0.0533
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 0.5556 +0.2175 -0.0279 -0.1166 -0.0009 -0.6847
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 0.2405 +0.0427 +0.0074 -0.0036 +0.0005 -0.0165
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 0.2841 +0.0473 +0.0030 -0.0078 +0.0005 -0.0520
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 0.2874 +0.0549 +0.0262 -0.0056 +0.0001 -0.0928
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 0.2304 +0.0358 +0.0129 -0.0110 +0.0001 -0.1012
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 0.2482 +0.0274 +0.0045 -0.0018 +0.0011 -0.0382
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 0.2891 +0.0778 +0.0001 -0.0169 +0.0003 -0.2496
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.3484 +0.0445 +0.0761 -0.1281 +0.0017 -0.2242
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.1016 -0.0103 +0.0134 -0.0147 -0.0018 -0.0478
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.5696 -0.0030 +0.1483 +0.0078 -0.0120 -0.3759
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.2600 +0.0037 +0.0045 +0.0051 +0.0002 -0.0907
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0902 +0.0676 -0.0087 -0.0168 +0.0006 -0.0621
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.2913 +0.0316 +0.0062 -0.0049 +0.0001 -0.0440
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.3015 -0.0093 +0.0378 -0.0706 +0.0033 -0.2786
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.1189 +0.0977 -0.0155 +0.0159 +0.0001 -0.1290
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.7490 +0.0737 +0.1982 -0.0827 -0.0008 -0.5253
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 0.2439 +0.0321 -0.0450 -0.0051 -0.0001 -0.2387
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 0.2661 +0.0200 -0.0293 -0.0344 -0.0000 -0.2757
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 0.1235 +0.0068 -0.0387 -0.0080 +0.0005 +0.0163
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 0.1455 +0.0190 -0.0584 -0.0028 -0.0002 -0.0063
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 0.1644 +0.0281 -0.0478 -0.0031 -0.0006 -0.0293
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 0.1415 +0.0273 -0.0601 -0.0037 +0.0000 +0.0075
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 0.1427 +0.0130 -0.0614 -0.0008 +0.0011 -0.0433
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 0.2451 +0.0619 -0.0455 -0.0143 +0.0038 -0.3327
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 0.1743 +0.0688 -0.0494 -0.0103 +0.0013 -0.3241

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0975 +0.0149 -0.0182 -0.0054 +0.1015 -0.1248
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0489 +0.0035 +0.0005 +0.0043 +0.0189 -0.0515
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0687 -0.0157 -0.0104 +0.0083 +0.0352 -0.0787
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0791 -0.0042 +0.0002 -0.0084 +0.0711 -0.1116
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0480 +0.0032 -0.0030 +0.0035 +0.0313 -0.0549
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0623 +0.0000 +0.0073 -0.0081 +0.0305 -0.0936
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 0.1494 +0.0402 -0.0136 +0.0467 +0.1416 -0.2578
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 0.1130 +0.0316 -0.0208 -0.0112 +0.0754 -0.0709
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 0.2081 +0.1306 -0.0136 -0.0647 +0.5274 -0.7120
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 0.0395 +0.0032 +0.0034 -0.0021 +0.0187 -0.0256
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 0.0501 +0.0110 -0.0047 +0.0013 +0.0138 -0.0262
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 0.0479 +0.0055 -0.0000 +0.0038 +0.0183 -0.0325
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 0.0414 +0.0026 +0.0079 -0.0036 +0.0164 -0.0381
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 0.0521 +0.0015 +0.0006 +0.0010 +0.0050 -0.0042
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 0.0748 +0.0296 -0.0022 -0.0025 +0.0158 -0.0618
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0749 +0.0146 +0.0452 -0.0355 +0.0761 -0.2288
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0439 -0.0057 -0.0062 -0.0031 +0.0154 -0.0200
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.1223 -0.1294 +0.1626 +0.0090 +0.0813 -0.4595
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0480 -0.0046 +0.0074 +0.0016 +0.0039 -0.0250
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0199 +0.0109 -0.0066 +0.0090 -0.0065 -0.0169
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0645 -0.0053 +0.0093 +0.0025 +0.0083 -0.0262
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.1016 -0.0166 +0.0170 -0.0166 +0.0315 -0.1474
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0455 +0.0068 -0.0006 -0.0039 +0.0560 -0.0842
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.3508 -0.0891 -0.0032 -0.0082 +0.0618 -0.1414
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 0.0965 +0.0682 -0.0593 -0.0056 +0.0928 -0.2187
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 0.1199 +0.0668 -0.0849 -0.0031 +0.1131 -0.2367
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 0.0426 +0.0113 -0.0357 +0.0198 +0.0064 -0.0166
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 0.0357 -0.0054 -0.0154 +0.0040 +0.0050 -0.0180
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 0.0413 -0.0011 -0.0225 +0.0112 +0.0037 -0.0232
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 0.0399 +0.0094 -0.0181 -0.0013 +0.0020 -0.0077
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 0.0514 -0.0134 -0.0199 -0.0090 +0.0263 -0.0424
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 0.0805 +0.0271 -0.0671 +0.0055 +0.0651 -0.2439
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 0.0589 +0.0501 -0.0498 +0.0220 +0.0590 -0.2755

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100 233.2700 -13.9600 -97.9000 +42.3800 +56.8400 +59.3600 -5.6466% -29.5619% +22.2013% +32.2167% +34.1326%
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 22.1900 -1.8800 +4.8700 +2.3200 +5.0600 +3.1600 -7.8106% +28.1178% +11.6759% +29.5388% +16.6054%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10.4700 -2.2800 +1.4000 +2.1100 +1.1800 +2.3400 -17.8824% +15.4355% +25.2392% +12.7018% +28.7823%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 10.7100 -1.6000 +1.7500 +1.0500 -0.1000 +0.9200 -12.9976% +19.5312% +10.8696% -0.9251% +9.3973%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.6600 +0.4300 +0.2500 -0.2800 +0.3800 +10.1655% +5.6689% -5.6680% +8.8785%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.0500 -0.3300 +0.6700 +0.3000 +0.5100 +0.4900 -6.1338% +15.2968% +6.3158% +11.2335% +10.7456%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.7700 -0.6600 +0.6300 +0.3300 +0.1100 +0.5300 -12.1547% +15.2174% +7.4324% +2.3605% +12.5000%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.1100 -0.4400 +0.6900 +0.5800 +0.6500 +0.5700 -7.9279% +15.6109% +12.8035% +14.5740% +12.5551%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800 54.3600 -22.0400 -8.5600 -15.6500 -10.3900 -12.9200 -28.8482% -13.6046% -22.3539% -16.0463% -19.2033%
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 16.5100 -11.1500 -3.2500 -1.8100 -2.7700 -1.3900 -40.3109% -16.4474% -9.8799% -14.3672% -7.7654%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900 22.1400 -8.1500 -3.5500 -4.4200 -7.2300 -4.5500 -26.9066% -13.8186% -16.6416% -24.6170% -17.0476%
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.4800 -0.3100 +0.8900 +0.8300 +1.3900 +1.1200 -5.3541% +19.3900% +17.8495% +33.9853% +25.6881%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.5300 -0.7300 +1.1300 -0.3500 +0.5200 -11.6613% +25.6818% -5.9524% +10.3792%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.1900 +0.6700 +1.4600 +0.3900 +1.5500 +1.3600 +14.8230% +39.1421% +8.1250% +42.5824% +35.5091%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.3100 -1.4300 +0.8000 +0.3900 +0.8700 +0.5900 -24.9129% +22.7920% +9.9490% +25.2907% +15.8602%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 7.0800 +0.0100 +1.5500 +1.5700 +1.3400 +1.6100 +0.1414% +28.0289% +28.4936% +23.3449% +29.4333%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.9500 -0.6400 +1.2200 +0.8100 +1.4100 +1.0600 -8.4321% +21.2914% +13.1922% +25.4513% +17.9966%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.7800 -0.6700 +1.1100 +1.4800 +1.3700 +1.3600 -10.3876% +23.7687% +34.4186% +31.0658% +30.7692%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.4000 -0.9800 +1.4700 +1.7700 +0.7800 +1.4400 -13.2791% +29.8174% +38.2289% +13.8790% +29.0323%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.6400 -0.1000 +0.9800 +1.2500 +1.0500 -2.1097% +26.7760% +36.8732% +29.2479%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.7300 -0.5300 +0.8900 +0.9700 +0.6700 -10.0760% +23.1771% +25.7979% +16.5025%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.4100 -0.2400 +0.9800 +0.7000 +0.9600 +0.8600 -5.1613% +28.5714% +18.8679% +27.8261% +24.2254%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.8800 +0.7100 +1.5900 +1.1900 +1.6100 +1.3600 +17.0264% +48.3283% +32.2493% +49.2355% +38.6364%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.4800 -0.8000 +0.9500 +0.8800 +0.9900 +0.7800 -15.1515% +26.9122% +24.4444% +28.3668% +21.0811%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.9100 -0.6000 +1.0900 +0.7600 +0.1000 +0.8800 -10.8893% +28.5340% +18.3133% +2.0790% +21.8362%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.7700 +0.0400 +1.3100 +1.2000 +1.0000 +0.8457% +37.8613% +33.6134% +26.5252%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.8600 +0.2100 +1.2400 +1.1300 +1.0800 +1.3600 +4.5161% +34.2541% +30.2949% +28.5714% +38.8571%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 8.4700 -0.5700 +1.9200 +2.3700 +1.2600 -6.3053% +29.3130% +38.8525% +17.4757%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700 87.4900 -12.8600 +21.8200 +27.4500 +38.7900 +28.6200 -12.8151% +33.2267% +45.7195% +79.6509% +48.6156%
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.7800 +1.3100 +1.6400 +0.2000 +0.5600 +29.3065% +39.6135% +3.5842% +10.7280%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400 259.8200 +24.1900 +7.7500 +96.1400 +116.5900 +94.1800 +10.2661% +3.0745% +58.7366% +81.4005% +56.8582%
EWZ_2P_MBR_Exploris 26.1800 24.2800 26.1100 -0.0700 +1.8300 -0.2674% +7.5371%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 13.6500 +0.7400 +1.2300 +5.7320% +9.9034%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 15.6900 +3.6300 +1.2800 +30.0995% +8.8827%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 33.8900 +6.3800 +5.6100 +23.1916% +19.8373%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 33.1800 +5.5100 +4.6800 +19.9133% +16.4211%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png