Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909 6321590 +822254 -1451922 -1416167 +92683 +92681 +14.9519% -18.6778% -18.3020% +1.4879% +1.4879%
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1217141 +120647 -89864 -94814 -76400 -76400 +11.0030% -6.8756% -7.2269% -5.9063% -5.9063%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 566088 -20234 -49674 -44622 -33793 -33793 -3.4510% -8.0671% -7.3066% -5.6333% -5.6333%
MTAC_3P_Standard 596590 623022 617574 607435 607435 577286 -19304 -45736 -40288 -30149 -30149 -3.2357% -7.3410% -6.5236% -4.9633% -4.9633%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 137405 -143 +566 +1845 +1845 -0.1040% +0.4136% +1.3610% +1.3610%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 157952 +2311 +1401 +1443 +2917 +3108 +1.4848% +0.8949% +0.9220% +1.8815% +2.0072%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 139633 +1124 +248 +341 +1748 +1846 +0.8115% +0.1779% +0.2448% +1.2677% +1.3397%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 159508 +546 +776 +348 +1586 +1586 +0.3435% +0.4889% +0.2186% +1.0043% +1.0043%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373 3265308 -16775 -495524 -448827 -373064 -373065 -0.5111% -13.1759% -12.0843% -10.2536% -10.2536%
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1210923 +188187 +56254 +87050 +26839 +26839 +18.4003% +4.8719% +7.7455% +2.2666% +2.2666%
SCIEX_3P 672242 749525 722698 714454 714454 723985 +51743 -25540 +1287 +9531 +9531 +7.6971% -3.4075% +0.1781% +1.3340% +1.3340%
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 47800 +6918 +6100 +5375 +5700 +5700 +16.9219% +14.6283% +12.6694% +13.5392% +13.5392%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 46108 +5039 +3706 +4085 +4956 +4956 +12.2696% +8.7402% +9.7209% +12.0432% +12.0432%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 36623 +27883 +13508 +13608 +13710 +13710 +319.0275% +58.4382% +59.1267% +59.8350% +59.8350%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 25591 +8656 +8038 +7182 +7243 +7243 +51.1131% +45.7927% +39.0135% +39.4757% +39.4757%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 107702 +7794 +4811 +8719 +9054 +9054 +7.8012% +4.6758% +8.8086% +9.1781% +9.1781%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 75941 +4843 +3213 +4496 +4815 +4815 +6.8117% +4.4178% +6.2930% +6.7697% +6.7697%
SCP_Astral_10ng_3ms 116421
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 120700 +5543 +3384 +6378 +7619 +7450 +4.8134% +2.8845% +5.5790% +6.7376% +6.5784%
SCP_Astral_10ng_ms 105704 106497 105622 104434 104512
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 15461 +5267 +4655 +4223 +4228 +4228 +51.6676% +43.0779% +37.5779% +37.6391% +37.6391%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 17350 +2543 +1917 +1309 +1651 +1651 +17.1743% +12.4214% +8.1603% +10.5166% +10.5166%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 6084 +4823 +4052 +3634 +3698 +3698 +382.4742% +199.4094% +148.3265% +154.9874% +154.9874%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 11077 +9641 +6294 +5387 +5346 +5346 +671.3788% +131.5911% +94.6749% +93.2821% +93.2821%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 28144 +6434 +6249 +5564 +5681 +5681 +29.6361% +28.5408% +24.6413% +25.2905% +25.2905%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 27895 +2035 +1752 +1635 +2270 +2270 +7.8693% +6.7016% +6.2262% +8.8585% +8.8585%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 15462 +11978 +8564 +8628 +8628 +343.8002% +124.1519% +126.2511% +126.2511%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 23294 +12595 +11820 +10412 +10405 +10405 +117.7213% +103.0155% +80.8260% +80.7278% +80.7278%
SCP_Astral_MBR 92167 93585 91884 90864 90838 98261 +6094 +4676 +6377 +7397 +7423 +6.6119% +4.9965% +6.9403% +8.1407% +8.1717%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207 2841241 +328504 -282765 -294256 -129966 -129966 +13.0736% -9.0514% -9.3847% -4.3742% -4.3742%
Seer_Astral_single 56699 55793 55891 55891 55431 -1268 -362 -460 -460 -2.2364% -0.6488% -0.8230% -0.8230%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526 17215965 +1127691 -3177822 -1983825 -397481 -410561 +7.0094% -15.5823% -10.3325% -2.2567% -2.3292%
EWZ_2P_MBR_Exploris 1776128 1775346 1774720 -1408 -626 -0.0793% -0.0353%
EWZ_2P_MBR_Exploris_Human 836809 836809 838924 +2115 +2115 +0.2527% +0.2527%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 915663 +739 +1714 +0.0808% +0.1875%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2101791 +23757 +23755 +1.1432% +1.1431%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2104249 +26215 +26213 +1.2615% +1.2614%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990 96534 -149634 -334240 -300679 -252399 -252456 -60.7853% -77.5906% -75.6972% -72.3345% -72.3390%
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 134043 +22539 +424 +2684 +2012 +2012 +20.2136% +0.3173% +2.0433% +1.5239% +1.5239%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 110256 +1989 -7096 -4403 -4560 -4560 +1.8371% -6.0468% -3.8401% -3.9716% -3.9716%
MTAC_3P_Standard 110265 118693 115800 116148 116148 111545 +1280 -7148 -4255 -4603 -4603 +1.1608% -6.0223% -3.6744% -3.9630% -3.9630%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 50945 +2087 +1913 +1950 +1950 +4.2716% +3.9015% +3.9800% +3.9800%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 58340 +4371 +3265 +2500 +2456 +2519 +8.0991% +5.9283% +4.4771% +4.3948% +4.5126%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 52509 +3888 +2844 +2220 +2049 +2094 +7.9965% +5.7264% +4.4145% +4.0606% +4.1535%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 58572 +3512 +2653 +1865 +1745 +1745 +6.3785% +4.7444% +3.2888% +3.0707% +3.0707%
Olsen_Astral_3P 198770 231103 234505 234149 234149 225918 +27148 -5185 -8587 -8231 -8231 +13.6580% -2.2436% -3.6618% -3.5153% -3.5153%
Olsen_Exploris_3P 51272 58784 55047 58593 58565 63117 +11845 +4333 +8070 +4524 +4552 +23.1023% +7.3711% +14.6602% +7.7211% +7.7726%
SCIEX_3P 82206 93920 87927 87858 87858 96368 +14162 +2448 +8441 +8510 +8510 +17.2275% +2.6065% +9.6000% +9.6861% +9.6861%
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 17768 +3328 +2810 +2519 +2061 +2061 +23.0471% +18.7859% +16.5191% +13.1215% +13.1215%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 16919 +2436 +1854 +2003 +1849 +1847 +16.8197% +12.3067% +13.4285% +12.2694% +12.2545%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 14373 +5633 +4997 +4984 +5009 +4988 +64.4508% +53.2956% +53.0834% +53.4921% +53.1486%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 14327 +5429 +5068 +4543 +4517 +4517 +61.0137% +54.7359% +46.4330% +46.0449% +46.0449%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 38584 +3719 +2287 +4242 +4159 +4159 +10.6669% +6.3008% +12.3522% +12.0813% +12.0813%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 27574 +2925 +2108 +2455 +2351 +2351 +11.8666% +8.2777% +9.7735% +9.3209% +9.3209%
SCP_Astral_10ng_3ms 42461
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 43205 +3049 +1660 +3162 +3312 +3259 +7.5929% +3.9957% +7.8965% +8.3022% +8.1585%
SCP_Astral_10ng_ms 36688 37676 37649 37421 37459
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 6030 +2364 +2081 +1821 +1784 +1784 +64.4845% +52.6969% +43.2644% +42.0160% +42.0160%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 6708 +1409 +1097 +853 +642 +641 +26.5899% +19.5509% +14.5687% +10.5836% +10.5654%
SCP_Astral_250pg_3ms 675 721 908 879 879 2716 +2041 +1995 +1808 +1837 +1837 +302.3704% +276.6990% +199.1189% +208.9875% +208.9875%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 4445 +3009 +2707 +2300 +2282 +2280 +209.5404% +155.7537% +107.2261% +105.5016% +105.3118%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 10705 +2911 +2733 +2453 +2299 +2297 +37.3492% +34.2825% +29.7261% +27.3495% +27.3192%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 10362 +1204 +1020 +991 +948 +947 +13.1470% +10.9184% +10.5752% +10.0701% +10.0584%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 6618 +4772 +4018 +4032 +4029 +258.5049% +154.5385% +155.9165% +155.6199%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 9060 +5186 +4905 +4286 +4255 +4256 +133.8668% +118.0505% +89.7780% +88.5536% +88.5928%
SCP_Astral_MBR 24110 24991 24570 24544 24527 26641 +2531 +1650 +2071 +2097 +2114 +10.4977% +6.6024% +8.4290% +8.5438% +8.6191%
Seer_Astral_45 69584 90103 87204 87620 87624 82644 +13060 -7459 -4560 -4976 -4980 +18.7687% -8.2783% -5.2291% -5.6791% -5.6834%
Seer_Astral_single 56699 55793 55891 55891 55431 -1268 -362 -460 -460 -2.2364% -0.6488% -0.8230% -0.8230%
YEAST_KO_Astral 66823 87888 87428 86498 86777 81009 +14186 -6879 -6419 -5489 -5768 +21.2292% -7.8270% -7.3420% -6.3458% -6.6469%
EWZ_2P_MBR_Exploris 55271 55147 55440 +169 +293 +0.3058% +0.5313%
EWZ_2P_MBR_Exploris_Human 48465 48473 48853 +388 +380 +0.8006% +0.7839%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 51601 +355 +424 +0.6927% +0.8285%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 72502 -776 -775 -1.0590% -1.0576%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 72502 -776 -775 -1.0590% -1.0576%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383 592367 -10911 -132574 -138197 -45098 -57016 -1.8086% -18.2876% -18.9165% -7.0746% -8.7800%
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 87205 -715 -5683 -6777 -6236 -7081 -0.8132% -6.1181% -7.2110% -6.6737% -7.5101%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 62514 -1259 -1460 -1097 -501 -3321 -1.9742% -2.2822% -1.7245% -0.7950% -5.0444%
MTAC_3P_Standard 64317 64464 64219 63385 65967 62868 -1449 -1596 -1351 -517 -3099 -2.2529% -2.4758% -2.1037% -0.8157% -4.6978%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12390 +323 +420 +450 +151 +2.6767% +3.5088% +3.7688% +1.2338%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 12693 +261 +222 +331 +365 +33 +2.0994% +1.7801% +2.6776% +2.9607% +0.2607%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12291 +283 +244 +331 +323 +111 +2.3568% +2.0254% +2.7676% +2.6989% +0.9113%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 12794 +233 +329 +317 +384 +20 +1.8549% +2.6394% +2.5407% +3.0943% +0.1566%
Olsen_Astral_3P 236395 245756 242430 240719 247368 233584 -2811 -12172 -8846 -7135 -13784 -1.1891% -4.9529% -3.6489% -2.9640% -5.5723%
Olsen_Exploris_3P 146224 153534 153990 155827 157286 146933 +709 -6601 -7057 -8894 -10353 +0.4849% -4.2994% -4.5828% -5.7076% -6.5823%
SCIEX_3P 70810 74366 72157 71550 73429 71793 +983 -2573 -364 +243 -1636 +1.3882% -3.4599% -0.5045% +0.3396% -2.2280%
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 10316 +1153 +788 +731 +982 +294 +12.5832% +8.2704% +7.6265% +10.5207% +2.9335%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 10305 +1007 +544 +893 +752 +316 +10.8303% +5.5732% +9.4879% +7.8719% +3.1635%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 8214 +5764 +2130 +1967 +2098 +1865 +235.2653% +35.0099% +31.4871% +34.3035% +29.3747%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 5917 +1214 +1329 +959 +994 +968 +25.8133% +28.9669% +19.3425% +20.1909% +19.5595%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 16739 +549 +459 +714 +684 +203 +3.3910% +2.8194% +4.4555% +4.2604% +1.2276%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 13952 +353 +111 +264 +281 -32 +2.5958% +0.8020% +1.9287% +2.0554% -0.2288%
SCP_Astral_10ng_3ms 17158
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 17664 +647 +486 +751 +919 +315 +3.8021% +2.8292% +4.4404% +5.4882% +1.8157%
SCP_Astral_10ng_ms 16252 16276 16117 15925 16458
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 4609 +962 +696 +745 +1070 +795 +26.3778% +17.7869% +19.2805% +30.2345% +20.8443%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5029 +729 +426 +232 +52 -140 +16.9535% +9.2548% +4.8364% +1.0448% -2.7085%
SCP_Astral_250pg_3ms 576 22 936 741 736 2088 +1512 +2066 +1152 +1347 +1352 +262.5000% +9390.9091% +123.0769% +181.7814% +183.6957%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 3244 +2607 +1164 +1215 +1198 +1176 +409.2622% +55.9615% +59.8817% +58.5533% +56.8665%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7319 +1074 +973 +1303 +1192 +1100 +17.1978% +15.3325% +21.6589% +19.4549% +17.6877%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7279 +557 +550 +267 +256 -63 +8.2862% +8.1736% +3.8078% +3.6452% -0.8581%
SCP_Astral_500pg_3ms 982 2365 2177 2236 4566 +3584 +2201 +2389 +2330 +364.9695% +93.0655% +109.7382% +104.2039%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 6071 +2363 +2064 +2026 +2153 +1968 +63.7271% +51.5099% +50.0865% +54.9515% +47.9649%
SCP_Astral_MBR 20165 20129 20074 19793 19898 19535 -630 -594 -539 -258 -363 -3.1242% -2.9510% -2.6851% -1.3035% -1.8243%
Seer_Astral_45 225377 241455 241952 237727 242898 225910 +533 -15545 -16042 -11817 -16988 +0.2365% -6.4381% -6.6302% -4.9708% -6.9939%
Seer_Astral_single 4685 4700 4632 4739 4638 -47 -62 +6 -101 -1.0032% -1.3191% +0.1295% -2.1313%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667 1344239 +43403 -44024 +16775 +42539 +5572 +3.3365% -3.1712% +1.2637% +3.2680% +0.4162%
EWZ_2P_MBR_Exploris 245259 247422 235355 -9904 -12067 -4.0382% -4.8771%
EWZ_2P_MBR_Exploris_Human 115447 117345 110561 -4886 -6784 -4.2322% -5.7812%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 124297 -4671 -6409 -3.6218% -4.9034%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 185130 +6956 +1587 +3.9040% +0.8646%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 185190 +7016 +1647 +3.9377% +0.8973%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514 6018 -15722 -22522 -21509 -20379 -20496 -72.3183% -78.9138% -78.1378% -77.2020% -77.3026%
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 7988 +143 -187 -167 -215 -261 +1.8228% -2.2875% -2.0478% -2.6210% -3.1640%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 11365 +4 -129 +14 +27 -433 +0.0352% -1.1223% +0.1233% +0.2381% -3.6701%
MTAC_3P_Standard 11473 11560 11477 11396 11832 11407 -66 -153 -70 +11 -425 -0.5753% -1.3235% -0.6099% +0.0965% -3.5920%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4296 +168 +204 +196 +113 +4.0698% +4.9853% +4.7805% +2.7014%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4359 +144 +111 +141 +145 +22 +3.4164% +2.6130% +3.3428% +3.4409% +0.5073%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4249 +174 +115 +159 +152 +64 +4.2699% +2.7818% +3.8875% +3.7100% +1.5293%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4380 +131 +143 +136 +149 +26 +3.0831% +3.3750% +3.2045% +3.5216% +0.5972%
Olsen_Astral_3P 13820 14378 14293 14296 14611 14144 +324 -234 -149 -152 -467 +2.3444% -1.6275% -1.0425% -1.0632% -3.1962%
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7350 +95 -232 +10 -129 -187 +1.3094% -3.0599% +0.1362% -1.7248% -2.4811%
SCIEX_3P 8652 9109 8679 8618 8812 9112 +460 +3 +433 +494 +300 +5.3167% +0.0329% +4.9891% +5.7322% +3.4044%
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 3665 +420 +276 +254 +347 +104 +12.9430% +8.1440% +7.4465% +10.4581% +2.9205%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3650 +396 +217 +359 +216 +158 +12.1696% +6.3210% +10.9085% +6.2900% +4.5246%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3056 +606 +660 +606 +659 +622 +24.7347% +27.5459% +24.7347% +27.4927% +25.5546%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3135 +627 +699 +501 +493 +552 +25% +28.6946% +19.0205% +18.6601% +21.3705%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 5816 +237 +160 +312 +270 +162 +4.2481% +2.8289% +5.6686% +4.8684% +2.8652%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 4885 +164 +47 +102 +74 +41 +3.4738% +0.9715% +2.1326% +1.5381% +0.8464%
SCP_Astral_10ng_3ms 6043
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6108 +262 +159 +265 +303 +143 +4.4817% +2.6727% +4.5353% +5.2196% +2.3973%
SCP_Astral_10ng_ms 5611 5655 5596 5553 5713
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 1717 +425 +293 +311 +429 +358 +32.8947% +20.5758% +22.1195% +33.3075% +26.3429%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 1839 +271 +179 +81 -34 -31 +17.2832% +10.7831% +4.6075% -1.8153% -1.6578%
SCP_Astral_250pg_3ms 307 8 350 283 281 860 +553 +852 +510 +577 +579 +180.1303% +10650% +145.7143% +203.8869% +206.0498%
SCP_Astral_250pg_6ms 637 756 751 766 767 1235 +598 +479 +484 +469 +468 +93.8776% +63.3598% +64.4474% +61.2272% +61.0169%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2644 +437 +369 +475 +414 +427 +19.8006% +16.2198% +21.8995% +18.5650% +19.2603%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2591 +188 +203 +114 +52 -7 +7.8236% +8.5008% +4.6023% +2.0481% -0.2694%
SCP_Astral_500pg_3ms 525 902 828 835 1743 +1218 +841 +915 +908 +232.0000% +93.2373% +110.5072% +108.7425%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2232 +914 +785 +746 +797 +764 +69.3475% +54.2502% +50.2019% +55.5401% +52.0436%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4756 +48 +36 +44 +41 +40 +1.0195% +0.7627% +0.9338% +0.8696% +0.8482%
Seer_Astral_45 5802 6297 6122 6133 6246 5892 +90 -405 -230 -241 -354 +1.5512% -6.4316% -3.7569% -3.9296% -5.6676%
Seer_Astral_single 4685 4700 4632 4739 4638 -47 -62 +6 -101 -1.0032% -1.3191% +0.1295% -2.1313%
YEAST_KO_Astral 4565 4795 4676 4673 4783 4706 +141 -89 +30 +33 -77 +3.0887% -1.8561% +0.6416% +0.7062% -1.6099%
EWZ_2P_MBR_Exploris 7041 7106 6734 -307 -372 -4.3602% -5.2350%
EWZ_2P_MBR_Exploris_Human 6167 6284 5889 -278 -395 -4.5079% -6.2858%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 6629 -258 -334 -3.7462% -4.7968%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6042 +238 +87 +4.1006% +1.4610%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6045 +241 +90 +4.1523% +1.5113%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013 592366 -56647
KEAP1KO_Eclipse 94279 87198 -7081
MTAC_3P_Alternating 65832 62510 -3322
MTAC_3P_Standard 65967 62867 -3100
MTAC_Yeast_Alternating_3min 12239 12386 +147
MTAC_Yeast_Alternating_5min 12660 12693 +33
MTAC_Yeast_Standard_3min 12180 12286 +106
MTAC_Yeast_Standard_5min 12772 12790 +18
Olsen_Astral_3P 247364 233569 -13795
Olsen_Exploris_3P 157285 146933 -10352
SCIEX_3P 73429 71791 -1638
SCP_Astral_1000pg_12ms 10022 10315 +293
SCP_Astral_1000pg_24ms 9989 10305 +316
SCP_Astral_1000pg_3ms 6349 8213 +1864
SCP_Astral_1000pg_6ms 4949 5909 +960
SCP_Astral_10ng_12ms 16536 16735 +199
SCP_Astral_10ng_24ms 13982 13950 -32
SCP_Astral_10ng_3ms 17154
SCP_Astral_10ng_6ms 17349 17664 +315
SCP_Astral_10ng_ms 16458
SCP_Astral_250pg_12ms 3814 4609 +795
SCP_Astral_250pg_24ms 5169 5029 -140
SCP_Astral_250pg_3ms 736 2088 +1352
SCP_Astral_250pg_6ms 2066 3242 +1176
SCP_Astral_500pg_12ms 6219 7319 +1100
SCP_Astral_500pg_24ms 7342 7279 -63
SCP_Astral_500pg_3ms 2234 4565 +2331
SCP_Astral_500pg_6ms 4103 6069 +1966
SCP_Astral_MBR 19891 19535 -356
Seer_Astral_45 242898 225910 -16988
Seer_Astral_single 4739 4638 -101
YEAST_KO_Astral 1338667 1344239 +5572
EWZ_2P_MBR_Exploris 247422 235353 -12069
EWZ_2P_MBR_Exploris_Human 117340 110559 -6781
EWZ_2P_MBR_Exploris_YeastHuman 130702 124295 -6407
MacCoss_Eclipse_Normalization_noNorm 183540 185130 +1590
MacCoss_Eclipse_Normalization_yesNorm 183540 185190 +1650

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0017 -0.0006 -0.0006
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0019 +0.0007 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0009 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 -0.0019 -0.0007 -0.0005
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 20133 -4262 -4455

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 302 -469 -460

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0150 -0.0166 -0.0160

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 497 -347 +1126

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -33 -223 -89

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 11 +4 +1 +1 +0 -4
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 11 +4 +0 +1 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 10 +3 +0 +1 +0 -4
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 0 +0 +1 +0 +0 -2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1846 +0.0387 +0.0425 +0.0445 +0.0472 +0.0471
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1711 +0.0318 +0.0349 +0.0360 +0.0387 +0.0386
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1921 +0.0465 +0.0496 +0.0513 +0.0512
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1728 +0.0197 +0.0318 +0.0352 +0.0372 +0.0373
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1984 +0.0286 +0.0345 +0.0368 +0.0385 +0.0386
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1676 +0.0173 +0.0310 +0.0339 +0.0353 +0.0353
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833 0.1050 +0.0228 +0.0166 +0.0196 +0.0218 +0.0217
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1823 +0.0342 +0.0323 +0.0327 +0.0318 +0.0317
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184 0.1742 +0.0458 +0.0460 +0.0546 +0.0558 +0.0557
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.6156 +0.0287 +0.0287
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2373 +0.0657 +0.0656

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0935 +0.0172 +0.0196 +0.0208 +0.0215 +0.0178
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0869 +0.0146 +0.0166 +0.0169 +0.0181 +0.0151
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0859 +0.0186 +0.0198 +0.0200 +0.0172
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0752 -0.0026 +0.0149 +0.0159 +0.0164 +0.0150
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0894 +0.0102 +0.0138 +0.0141 +0.0122 +0.0119
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0725 -0.0045 +0.0158 +0.0157 +0.0157 +0.0142
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374 0.0489 +0.0115 +0.0116 +0.0122 +0.0126 +0.0115
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1185 +0.0157 +0.0166 +0.0149 +0.0158 +0.0152
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795 0.1094 +0.0230 +0.0262 +0.0308 +0.0309 +0.0299
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5928 +0.0046 +0.0048
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1413 +0.0180 +0.0166

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 -0.0687 -0.0020 +0.0070 +0.0012 +0.0000 -0.0090
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0214 -0.0076 +0.0055 -0.0002 -0.0001 -0.0194
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0234 +0.0007 -0.0023 -0.0001 -0.0000 +0.0226
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.1267 +0.0012 -0.0008 +0.0020 -0.0002 +0.0001
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0691 -0.0054 -0.0006 -0.0003 +0.0001 -0.0032
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0123 -0.0080 +0.0050 -0.0016 -0.0001 -0.0167
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 -0.0274 +0.0114 +0.0329 -0.0052 +0.0001 -0.0689
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 -0.1994 +0.0115 +0.0151 +0.0011 +0.0002 -0.0300
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 0.0977 -0.0082 +0.0282 -0.0195 +0.0005 +0.0775
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 0.0158 +0.0067 +0.0305 +0.0014 +0.0001 -0.0266
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 -0.3187 +0.0081 +0.0093 -0.0002 +0.0000 -0.0242
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 0.1164 -0.0024 -0.0402 -0.0016 -0.0001 +0.0831
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 0.1504 +0.0108 -0.0145 +0.0012 -0.0002 +0.0775
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 -0.1871 +0.0015 +0.0038 -0.0038 -0.0001 -0.0406
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 0.2937 +0.0262 -0.0191 +0.0011 -0.0004 +0.0918
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1684 -0.0059 -0.0059 +0.0211 -0.0012 -0.0668
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0663 +0.0062 +0.0047 -0.0191 -0.0001 +0.0059
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.2358 +0.0183 -0.0240 +0.0287 +0.0020 -0.0447
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1196 +0.0048 -0.0054 -0.0067 +0.0002 +0.0311
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0445 +0.0009 +0.0001 -0.0089 -0.0000 -0.0011
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2343 +0.0051 -0.0017 +0.0004 +0.0004 +0.0303
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1194 -0.0032 -0.0062 -0.0160 +0.0006 +0.0963
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0761 +0.0043 -0.0045 -0.0054 -0.0001 -0.0258
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 -0.0051 +0.0169 -0.0238 +0.0355 +0 -0.0913
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 -0.1118 +0.0195 +0.0041 +0.0006 +0.0003 +0.0342
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0603 -0.0031 +0.0125 +0.0006 -0.0005 -0.0073
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 0.0281 -0.0051 -0.0071 +0.0012 +0.0002 +0.0244
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 -0.0806 +0.0119 -0.0026 -0.0002 -0.0000 +0.0382
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0794 -0.0238 +0.0049 +0.0003 -0.0001 +0.0177
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0030 -0.0331 +0.0073 +0.0004 +0.0000 -0.0200
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 -0.0328 +0.0109 -0.0100 -0.0011 +0.0003 +0.0242
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0624 -0.0356 -0.0145 +0.0024 +0.0008 +0.0028
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0311 -0.0468 -0.0064 -0.0010 -0.0004 -0.0053

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 -0.0847 +0.0009 +0.0076 -0.0005 +0.0006 +0.0107
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0261 -0.0089 +0.0045 +0.0004 +0.0011 -0.0161
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0416 +0.0054 -0.0044 +0.0010 +0.0033 +0.0347
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.1566 +0.0013 +0.0005 -0.0055 +0.0004 +0.0355
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0690 -0.0060 -0.0005 -0.0005 -0.0005 -0.0007
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 0.0065 -0.0084 +0.0078 -0.0007 +0.0020 -0.0265
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 -0.0438 +0.0142 +0.0365 -0.0057 -0.0002 -0.0463
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 -0.1841 +0.0050 +0.0043 -0.0072 -0.0060 +0.0266
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 0.0652 -0.0338 -0.0246 +0.0154 -0.0097 +0.0576
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 0.0072 +0.0064 +0.0290 +0.0021 -0.0001 -0.0451
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 -0.3006 +0.0072 +0.0066 -0.0010 +0.0001 -0.0051
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 0.1017 +0.0002 -0.0402 -0.0012 -0.0002 +0.0731
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 0.1532 +0.0124 -0.0135 -0.0021 -0.0022 +0.1043
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.1755 -0.0003 +0.0009 -0.0042 +0.0009 -0.0211
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 0.2961 +0.0289 -0.0188 +0.0012 -0.0027 +0.1185
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.2051 -0.0077 -0.0028 +0.0144 -0.0004 -0.0157
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0691 +0.0048 +0.0016 -0.0170 -0.0057 +0.0191
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.3143 +0.0504 -0.0481 +0.0073 +0.0089 +0.0400
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1185 +0.0031 -0.0032 -0.0081 +0.0006 +0.0420
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0397 +0.0011 -0.0008 -0.0084 -0.0000 -0.0024
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2477 +0.0036 -0.0008 +0.0016 +0.0018 +0.0426
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1014 +0.0005 -0.0096 -0.0297 +0.0070 +0.0898
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0862 +0.0056 -0.0034 -0.0033 +0.0038 -0.0260
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 -0.0170 +0.0405 -0.0089 +0.0322 +0.0276 -0.1278
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 -0.1315 +0.0258 +0.0029 -0.0003 -0.0025 +0.0640
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0927 -0.0049 +0.0142 +0.0054 -0.0021 +0.0271
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 0.0294 -0.0001 -0.0108 +0.0000 -0.0004 +0.0257
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 -0.0875 +0.0137 -0.0048 +0.0001 -0.0001 +0.0468
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0869 -0.0232 +0.0027 +0.0012 -0.0002 +0.0246
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0002 -0.0350 +0.0076 +0.0002 -0.0001 -0.0215
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 -0.0341 +0.0131 -0.0109 +0.0003 +0.0016 +0.0208
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0471 -0.0435 -0.0160 +0.0023 +0.0005 -0.0113
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0124 -0.0508 -0.0078 +0.0009 +0.0008 -0.0327

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.2401 +0.0343 +0.0202 -0.0086 +0.0005 -0.0682
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1945 +0.0169 -0.0058 +0.0004 +0.0004 -0.0158
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.2174 +0.0117 -0.0078 +0.0011 -0.0001 -0.0434
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.2358 +0.0441 -0.0007 -0.0136 +0.0007 -0.0629
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1872 +0.0164 -0.0031 -0.0002 +0.0007 -0.0328
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1939 +0.0170 -0.0063 +0.0017 +0.0006 -0.0748
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 0.3179 +0.0354 +0.0384 -0.0420 -0.0006 -0.2571
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 0.2971 +0.0422 -0.0321 -0.0167 +0.0004 -0.0533
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 0.5468 +0.2175 -0.0279 -0.1166 -0.0009 -0.6934
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 0.2394 +0.0427 +0.0074 -0.0036 +0.0005 -0.0176
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 0.2838 +0.0473 +0.0030 -0.0078 +0.0005 -0.0523
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 0.2867 +0.0549 +0.0262 -0.0056 +0.0001 -0.0935
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 0.2316 +0.0358 +0.0129 -0.0110 +0.0001 -0.1000
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 0.2478 +0.0274 +0.0045 -0.0018 +0.0011 -0.0386
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 0.2859 +0.0778 +0.0001 -0.0169 +0.0003 -0.2527
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.3273 +0.0445 +0.0761 -0.1281 +0.0017 -0.2453
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0997 -0.0103 +0.0134 -0.0147 -0.0018 -0.0497
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.5561 -0.0030 +0.1483 +0.0078 -0.0120 -0.3894
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.2559 +0.0037 +0.0045 +0.0051 +0.0002 -0.0948
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0898 +0.0676 -0.0087 -0.0168 +0.0006 -0.0625
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.2882 +0.0316 +0.0062 -0.0049 +0.0001 -0.0472
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2862 -0.0093 +0.0378 -0.0706 +0.0033 -0.2939
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.1157 +0.0977 -0.0155 +0.0159 +0.0001 -0.1323
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.7297 +0.0737 +0.1982 -0.0827 -0.0008 -0.5447
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 0.2417 +0.0321 -0.0450 -0.0051 -0.0001 -0.2409
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 0.2604 +0.0200 -0.0293 -0.0344 -0.0000 -0.2814
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 0.1232 +0.0068 -0.0387 -0.0080 +0.0005 +0.0160
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 0.1450 +0.0190 -0.0584 -0.0028 -0.0002 -0.0068
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 0.1639 +0.0281 -0.0478 -0.0031 -0.0006 -0.0299
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 0.1411 +0.0273 -0.0601 -0.0037 +0.0000 +0.0071
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 0.1422 +0.0130 -0.0614 -0.0008 +0.0011 -0.0439
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 0.2393 +0.0619 -0.0455 -0.0143 +0.0038 -0.3385
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 0.1752 +0.0688 -0.0494 -0.0103 +0.0013 -0.3233

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0993 +0.0149 -0.0182 -0.0054 +0.1015 -0.1230
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0493 +0.0035 +0.0005 +0.0043 +0.0189 -0.0510
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0675 -0.0157 -0.0104 +0.0083 +0.0352 -0.0799
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0794 -0.0042 +0.0002 -0.0084 +0.0711 -0.1113
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0483 +0.0032 -0.0030 +0.0035 +0.0313 -0.0546
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0639 +0.0000 +0.0073 -0.0081 +0.0305 -0.0920
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 0.1553 +0.0402 -0.0136 +0.0467 +0.1416 -0.2519
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 0.1153 +0.0316 -0.0208 -0.0112 +0.0754 -0.0686
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 0.2076 +0.1306 -0.0136 -0.0647 +0.5274 -0.7126
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 0.0397 +0.0032 +0.0034 -0.0021 +0.0187 -0.0255
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 0.0500 +0.0110 -0.0047 +0.0013 +0.0138 -0.0263
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 0.0472 +0.0055 -0.0000 +0.0038 +0.0183 -0.0331
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 0.0417 +0.0026 +0.0079 -0.0036 +0.0164 -0.0378
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 0.0528 +0.0015 +0.0006 +0.0010 +0.0050 -0.0035
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 0.0725 +0.0296 -0.0022 -0.0025 +0.0158 -0.0641
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0725 +0.0146 +0.0452 -0.0355 +0.0761 -0.2312
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0432 -0.0057 -0.0062 -0.0031 +0.0154 -0.0207
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.1079 -0.1294 +0.1626 +0.0090 +0.0813 -0.4739
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0476 -0.0046 +0.0074 +0.0016 +0.0039 -0.0254
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0200 +0.0109 -0.0066 +0.0090 -0.0065 -0.0168
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0638 -0.0053 +0.0093 +0.0025 +0.0083 -0.0268
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.1182 -0.0166 +0.0170 -0.0166 +0.0315 -0.1308
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0457 +0.0068 -0.0006 -0.0039 +0.0560 -0.0841
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.3529 -0.0891 -0.0032 -0.0082 +0.0618 -0.1394
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 0.0971 +0.0682 -0.0593 -0.0056 +0.0928 -0.2181
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 0.1220 +0.0668 -0.0849 -0.0031 +0.1131 -0.2346
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 0.0424 +0.0113 -0.0357 +0.0198 +0.0064 -0.0168
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 0.0360 -0.0054 -0.0154 +0.0040 +0.0050 -0.0177
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 0.0423 -0.0011 -0.0225 +0.0112 +0.0037 -0.0222
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 0.0397 +0.0094 -0.0181 -0.0013 +0.0020 -0.0079
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 0.0519 -0.0134 -0.0199 -0.0090 +0.0263 -0.0419
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 0.0829 +0.0271 -0.0671 +0.0055 +0.0651 -0.2414
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 0.0618 +0.0501 -0.0498 +0.0220 +0.0590 -0.2726

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100 115.8200 -131.4100 -215.3500 -75.0700 -60.6100 -58.0900 -53.1529% -65.0270% -39.3263% -34.3536% -33.4023%
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 21.1100 -2.9600 +3.7900 +1.2400 +3.9800 +2.0800 -12.2975% +21.8822% +6.2406% +23.2341% +10.9301%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.8200 -2.9300 +0.7500 +1.4600 +0.5300 +1.6900 -22.9804% +8.2690% +17.4641% +5.7051% +20.7872%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 10.4300 -1.8800 +1.4700 +0.7700 -0.3800 +0.6400 -15.2721% +16.4062% +7.9710% -3.5153% +6.5373%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.0200 +0.7900 +0.6100 +0.0800 +0.7400 +18.6761% +13.8322% +1.6194% +17.2897%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.0900 -0.2900 +0.7100 +0.3400 +0.5500 +0.5300 -5.3903% +16.2100% +7.1579% +12.1145% +11.6228%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.9300 -0.5000 +0.7900 +0.4900 +0.2700 +0.6900 -9.2081% +19.0821% +11.0360% +5.7940% +16.2736%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.1900 -0.3600 +0.7700 +0.6600 +0.7300 +0.6500 -6.4865% +17.4208% +14.5695% +16.3677% +14.3172%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800 55.0200 -21.3800 -7.9000 -14.9900 -9.7300 -12.2600 -27.9843% -12.5556% -21.4112% -15.0270% -18.2224%
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 17.8900 -9.7700 -1.8700 -0.4300 -1.3900 -0.0100 -35.3218% -9.4636% -2.3472% -7.2095% -0.0559%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900 21.4600 -8.8300 -4.2300 -5.1000 -7.9100 -5.2300 -29.1515% -16.4656% -19.2018% -26.9322% -19.5954%
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.7100 -1.0800 +0.1200 +0.0600 +0.6200 +0.3500 -18.6528% +2.6144% +1.2903% +15.1589% +8.0275%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.2900 -0.9700 +0.8900 -0.5900 +0.2800 -15.4952% +20.2273% -10.0340% +5.5888%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.1500 +0.6300 +1.4200 +0.3500 +1.5100 +1.3200 +13.9381% +38.0697% +7.2917% +41.4835% +34.4648%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.2700 -1.4700 +0.7600 +0.3500 +0.8300 +0.5500 -25.6098% +21.6524% +8.9286% +24.1279% +14.7849%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 7.1300 +0.0600 +1.6000 +1.6200 +1.3900 +1.6600 +0.8487% +28.9331% +29.4011% +24.2160% +30.3473%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.8600 -0.7300 +1.1300 +0.7200 +1.3200 +0.9700 -9.6179% +19.7208% +11.7264% +23.8267% +16.4686%
SCP_Astral_10ng_3ms 5.5900
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.5800 -0.8000 +1.6500 +1.9500 +0.9600 +1.6200 -10.8401% +33.4686% +42.1166% +17.0819% +32.6613%
SCP_Astral_10ng_ms 6.4500 4.6700 4.3000 4.4100 4.4200
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.6500 -0.0900 +0.9900 +1.2600 +1.0600 -1.8987% +27.0492% +37.1681% +29.5265%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.8100 -0.4500 +0.9700 +1.0500 +0.7500 -8.5551% +25.2604% +27.9255% +18.4729%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.4800 -0.1700 +1.0500 +0.7700 +1.0300 +0.9300 -3.6559% +30.6122% +20.7547% +29.8551% +26.1972%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.5400 +0.3700 +1.2500 +0.8500 +1.2700 +1.0200 +8.8729% +37.9939% +23.0352% +38.8379% +28.9773%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.7000 -0.5800 +1.1700 +1.1000 +1.2100 +1 -10.9848% +33.1445% +30.5556% +34.6705% +27.0270%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.0400 -0.4700 +1.2200 +0.8900 +0.2300 +1.0100 -8.5299% +31.9372% +21.4458% +4.7817% +25.0620%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.5300 -0.2000 +1.0700 +0.9600 +0.7600 -4.2283% +30.9249% +26.8908% +20.1592%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.1000 +0.4500 +1.4800 +1.3700 +1.3200 +1.6000 +9.6774% +40.8840% +36.7292% +34.9206% +45.7143%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 8.3200 -0.7200 +1.7700 +2.2200 +1.1100 -7.9646% +27.0229% +36.3934% +15.3953%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700 89.0900 -11.2600 +23.4200 +29.0500 +40.3900 +30.2200 -11.2207% +35.6632% +48.3844% +82.9363% +51.3334%
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.7400 +1.2700 +1.6000 +0.1600 +0.5200 +28.4116% +38.6473% +2.8674% +9.9617%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400 159.7000 -75.9300 -92.3700 -3.9800 +16.4700 -5.9400 -32.2242% -36.6446% -2.4316% +11.4990% -3.5861%
EWZ_2P_MBR_Exploris 26.1800 24.2800 25.8800 -0.3000 +1.6000 -1.1459% +6.5898%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 14.0200 +1.1100 +1.6000 +8.5980% +12.8824%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 15.8300 +3.7700 +1.4200 +31.2604% +9.8543%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 33.2000 +5.6900 +4.9200 +20.6834% +17.3975%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 33.8600 +6.1900 +5.3600 +22.3708% +18.8070%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png