Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6656655
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1292235 1311414 +214920 +4409 -541 +17873 +19179 +19.6007% +0.3373% -0.0412% +1.3817% +1.4842%
MTAC_3P_Alternating 586322 615762 610710 599881 621395 631564 +45242 +15802 +20854 +31683 +10169 +7.7162% +2.5663% +3.4147% +5.2815% +1.6365%
MTAC_3P_Standard 596590 623022 617574 607435 625424 633114 +36524 +10092 +15540 +25679 +7690 +6.1221% +1.6198% +2.5163% +4.2274% +1.2296%
MTAC_Yeast_Alternating_3min 137548 136839 135560 145706 147825 +10277 +10986 +12265 +2119 +7.4716% +8.0284% +9.0477% +1.4543%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 164379 165711 +10070 +9160 +9202 +10676 +1332 +6.4700% +5.8511% +5.8795% +6.8862% +0.8103%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 148110 149475 +10966 +10090 +10183 +11590 +1365 +7.9172% +7.2389% +7.3105% +8.4056% +0.9216%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 165591 168068 +9106 +9336 +8908 +10146 +2477 +5.7284% +5.8816% +5.5969% +6.4247% +1.4959%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3412790
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1319303 1332395 +309659 +177726 +208522 +148311 +13092 +30.2775% +15.3919% +18.5539% +12.5254% +0.9923%
SCIEX_3P 672242 749525 722698 714454 743897
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 53263 55732 +14850 +14032 +13307 +13632 +2469 +36.3241% +33.6499% +31.3659% +32.3800% +4.6355%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 51247 53753 +12684 +11351 +11730 +12601 +2506 +30.8846% +26.7700% +27.9133% +30.6206% +4.8900%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 42044 44650 +35910 +21535 +21635 +21737 +2606 +410.8696% +93.1646% +94.0039% +94.8675% +6.1983%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 28680 29664 +12729 +12111 +11255 +11316 +984 +75.1639% +68.9968% +61.1386% +61.6743% +3.4310%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 114502 118272 +18364 +15381 +19289 +19624 +3770 +18.3809% +14.9488% +19.4872% +19.8930% +3.2925%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 85070 88255 +17157 +15527 +16810 +17129 +3185 +24.1315% +21.3494% +23.5286% +24.0826% +3.7440%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 123935 127960 +22256 +21463 +22338 +23526 +4025 +21.0550% +20.1536% +21.1490% +22.5271% +3.2477%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 128906 133395 +18238 +16079 +19073 +20314 +4489 +15.8375% +13.7057% +16.6836% +17.9641% +3.4824%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 18714 19479 +9285 +8673 +8241 +8246 +765 +91.0830% +80.2610% +73.3316% +73.4087% +4.0878%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 20673 21416 +6609 +5983 +5375 +5717 +743 +44.6343% +38.7676% +33.5079% +36.4163% +3.5941%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 8726 8868 +7607 +6836 +6418 +6482 +142 +603.2514% +336.4173% +261.9592% +271.6681% +1.6273%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16166 16678 +15242 +11895 +10988 +10947 +512 +1061.4206% +248.6933% +193.1107% +191.0138% +3.1671%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 32026 33358 +11648 +11463 +10778 +10895 +1332 +53.6527% +52.3544% +47.7325% +48.5020% +4.1591%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 32256 33493 +7633 +7350 +7233 +7868 +1237 +29.5166% +28.1146% +27.5438% +30.7044% +3.8349%
SCP_Astral_500pg_3ms 3484 6898 6834 19322 20327 +16843 +13429 +13493 +1005 +483.4386% +194.6796% +197.4393% +5.2013%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 28202 29292 +18593 +17818 +16410 +16403 +1090 +173.7826% +155.2902% +127.3871% +127.2636% +3.8650%
SCP_Astral_MBR 92167 93585 91884 90864 108777 113195 +21028 +19610 +21311 +22331 +4418 +22.8151% +20.9542% +23.1934% +24.5763% +4.0615%
Seer_Astral_45 2512737 3124006 3135497 2971207 3001003
Seer_Astral_single 56699 55793 55891 60660 62172 +5473 +6379 +6281 +1512 +9.6527% +11.4333% +11.2379% +2.4926%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17275427
EWZ_2P_MBR_Exploris 1776128 1865977 1891622 +115494 +25645 +6.5026% +1.3743%
EWZ_2P_MBR_Exploris_Human 836809 881569 894084 +57275 +12515 +6.8445% +1.4196%
EWZ_2P_MBR_Exploris_YeastHuman 914924 977795 992848 +77924 +15053 +8.5170% +1.5395%
MacCoss_Eclipse_Normalization_noNorm 2078034 2247711 2280866 +202832 +33155 +9.7608% +1.4751%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2247711 2280866 +202832 +33155 +9.7608% +1.4751%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 107890
KEAP1KO_Eclipse 111504 133619 131359 132031 148329 153242 +41738 +19623 +21883 +21211 +4913 +37.4318% +14.6858% +16.6589% +16.0652% +3.3122%
MTAC_3P_Alternating 108267 117352 114659 114816 123799 126079 +17812 +8727 +11420 +11263 +2280 +16.4519% +7.4366% +9.9600% +9.8096% +1.8417%
MTAC_3P_Standard 110265 118693 115800 116148 124703 126975 +16710 +8282 +11175 +10827 +2272 +15.1544% +6.9777% +9.6503% +9.3217% +1.8219%
MTAC_Yeast_Alternating_3min 48858 49032 48995 55378 56323 +7465 +7291 +7328 +945 +15.2790% +14.8699% +14.9566% +1.7065%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 61497 62551 +8582 +7476 +6711 +6667 +1054 +15.9017% +13.5742% +12.0183% +11.9301% +1.7139%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 56180 57341 +8720 +7676 +7052 +6881 +1161 +17.9346% +15.4556% +14.0229% +13.6365% +2.0666%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 62196 63144 +8084 +7225 +6437 +6317 +948 +14.6822% +12.9205% +11.3513% +11.1162% +1.5242%
Olsen_Astral_3P 198770 231103 234505 234149 239695
Olsen_Exploris_3P 51272 58784 55047 58593 72007 74613 +23341 +15829 +19566 +16020 +2606 +45.5239% +26.9274% +35.5442% +27.3411% +3.6191%
SCIEX_3P 82206 93920 87927 87858 102130
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 20401 21561 +7121 +6603 +6312 +5854 +1160 +49.3144% +44.1436% +41.3929% +37.2700% +5.6860%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 19303 20460 +5977 +5395 +5544 +5390 +1157 +41.2691% +35.8115% +37.1681% +35.7664% +5.9939%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 17210 18510 +9770 +9134 +9121 +9146 +1300 +111.7849% +97.4189% +97.1456% +97.6719% +7.5537%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 16380 17057 +8159 +7798 +7273 +7247 +677 +91.6948% +84.2208% +74.3357% +73.8736% +4.1331%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 41662 43425 +8560 +7128 +9083 +9000 +1763 +24.5518% +19.6380% +26.4487% +26.1438% +4.2317%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 31075 32482 +7833 +7016 +7363 +7259 +1407 +31.7782% +27.5505% +29.3125% +28.7793% +4.5278%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 45956 48008 +11320 +10332 +10359 +10587 +2052 +30.8548% +27.4233% +27.5147% +28.2916% +4.4651%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 46670 48804 +8648 +7259 +8761 +8911 +2134 +21.5360% +17.4726% +21.8790% +22.3373% +4.5725%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7634 8043 +4377 +4094 +3834 +3797 +409 +119.3944% +103.6718% +91.0905% +89.4253% +5.3576%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8261 8708 +3409 +3097 +2853 +2642 +447 +64.3329% +55.1952% +48.7276% +43.5542% +5.4110%
SCP_Astral_250pg_3ms 675 721 908 879 4172 4194 +3519 +3473 +3286 +3315 +22 +521.3333% +481.6921% +361.8943% +377.1331% +0.5273%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6891 7149 +5713 +5411 +5004 +4986 +258 +397.8412% +311.3349% +233.2867% +230.5132% +3.7440%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 12669 13416 +5622 +5444 +5164 +5010 +747 +72.1324% +68.2890% +62.5788% +59.6003% +5.8963%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 12395 13030 +3872 +3688 +3659 +3616 +635 +42.2800% +39.4776% +39.0460% +38.4109% +5.1230%
SCP_Astral_500pg_3ms 1846 2600 2586 8323 8844 +6998 +6244 +6258 +521 +379.0899% +240.1538% +241.9954% +6.2598%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 11257 11848 +7974 +7693 +7074 +7043 +591 +205.8338% +185.1504% +148.1776% +146.5765% +5.2501%
SCP_Astral_MBR 24110 24991 24570 24544 30152 31847 +7737 +6856 +7277 +7303 +1695 +32.0904% +27.4339% +29.6174% +29.7547% +5.6215%
Seer_Astral_45 69584 90103 87204 87620 91412
Seer_Astral_single 56699 55793 55891 60660 62172 +5473 +6379 +6281 +1512 +9.6527% +11.4333% +11.2379% +2.4926%
YEAST_KO_Astral 66823 87888 87428 86498 85126
EWZ_2P_MBR_Exploris 55271 61651 64234 +8963 +2583 +16.2165% +4.1897%
EWZ_2P_MBR_Exploris_Human 48465 53608 55631 +7166 +2023 +14.7859% +3.7737%
EWZ_2P_MBR_Exploris_YeastHuman 51246 57183 59747 +8501 +2564 +16.5886% +4.4839%
MacCoss_Eclipse_Normalization_noNorm 73278 79190 81864 +8586 +2674 +11.7170% +3.3767%
MacCoss_Eclipse_Normalization_yesNorm 73278 79190 81864 +8586 +2674 +11.7170% +3.3767%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 604895
KEAP1KO_Eclipse 87920 92888 93982 93441 90649 91802 +3882 -1086 -2180 -1639 +1153 +4.4154% -1.1691% -2.3196% -1.7540% +1.2719%
MTAC_3P_Alternating 63773 63974 63611 63015 65375 65767 +1994 +1793 +2156 +2752 +392 +3.1267% +2.8027% +3.3894% +4.3672% +0.5996%
MTAC_3P_Standard 64317 64464 64219 63385 65743 66249 +1932 +1785 +2030 +2864 +506 +3.0039% +2.7690% +3.1611% +4.5184% +0.7697%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12589 12658 +591 +688 +718 +69 +4.8977% +5.7477% +6.0134% +0.5481%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12877 12934 +502 +463 +572 +606 +57 +4.0380% +3.7126% +4.6271% +4.9156% +0.4426%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12568 12597 +589 +550 +637 +629 +29 +4.9051% +4.5655% +5.3261% +5.2557% +0.2307%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12961 13060 +499 +595 +583 +650 +99 +3.9726% +4.7734% +4.6726% +5.2377% +0.7638%
Olsen_Astral_3P 236395 245756 242430 240719 238322
Olsen_Exploris_3P 146224 153534 153990 155827 156821 158513 +12289 +4979 +4523 +2686 +1692 +8.4042% +3.2429% +2.9372% +1.7237% +1.0789%
SCIEX_3P 70810 74366 72157 71550 73551
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 11410 11805 +2642 +2277 +2220 +2471 +395 +28.8334% +23.8980% +23.1612% +26.4731% +3.4619%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11205 11625 +2327 +1864 +2213 +2072 +420 +25.0269% +19.0964% +23.5125% +21.6895% +3.7483%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 9023 9928 +7478 +3844 +3681 +3812 +905 +305.2245% +63.1821% +58.9243% +62.3283% +10.0299%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6458 6728 +2025 +2140 +1770 +1805 +270 +43.0576% +46.6434% +35.6999% +36.6646% +4.1809%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17253 17644 +1454 +1364 +1619 +1589 +391 +8.9809% +8.3784% +10.1030% +9.8972% +2.2663%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14759 15124 +1525 +1283 +1436 +1453 +365 +11.2141% +9.2696% +10.4909% +10.6283% +2.4731%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 17489 17998 +1746 +1722 +1881 +2073 +509 +10.7433% +10.5800% +11.6709% +13.0173% +2.9104%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18141 18597 +1580 +1419 +1684 +1852 +456 +9.2848% +8.2606% +9.9568% +11.0600% +2.5136%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5202 5453 +1806 +1540 +1589 +1914 +251 +49.5202% +39.3560% +41.1232% +54.0831% +4.8251%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5561 5753 +1453 +1150 +956 +776 +192 +33.7907% +24.9837% +19.9291% +15.5917% +3.4526%
SCP_Astral_250pg_3ms 576 22 936 741 2775 2706 +2130 +2684 +1770 +1965 -69 +369.7917% +12200% +189.1026% +265.1822% -2.4865%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4489 4790 +4153 +2710 +2761 +2744 +301 +651.9623% +130.2885% +136.0769% +134.1153% +6.7053%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7731 7939 +1694 +1593 +1923 +1812 +208 +27.1257% +25.1024% +31.9648% +29.5740% +2.6905%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8125 8337 +1615 +1608 +1325 +1314 +212 +24.0256% +23.8966% +18.8962% +18.7100% +2.6092%
SCP_Astral_500pg_3ms 982 2365 2177 5275 5523 +4541 +3158 +3346 +248 +462.4236% +133.5307% +153.6977% +4.7014%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7102 7399 +3691 +3392 +3354 +3481 +297 +99.5415% +84.6519% +82.9172% +88.8464% +4.1819%
SCP_Astral_MBR 20165 20129 20074 19793 20566 21124 +959 +995 +1050 +1331 +558 +4.7558% +4.9431% +5.2306% +6.7246% +2.7132%
Seer_Astral_45 225377 241455 241952 237727 233436
Seer_Astral_single 4685 4700 4632 5060 5093 +408 +393 +461 +33 +8.7086% +8.3617% +9.9525% +0.6522%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1341725
EWZ_2P_MBR_Exploris 245259 247748 252054 +6795 +4306 +2.7705% +1.7381%
EWZ_2P_MBR_Exploris_Human 115447 115558 117239 +1792 +1681 +1.5522% +1.4547%
EWZ_2P_MBR_Exploris_YeastHuman 128968 131740 134417 +5449 +2677 +4.2251% +2.0320%
MacCoss_Eclipse_Normalization_noNorm 178174 187459 190744 +12570 +3285 +7.0549% +1.7524%
MacCoss_Eclipse_Normalization_yesNorm 178174 187459 190744 +12570 +3285 +7.0549% +1.7524%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6423
KEAP1KO_Eclipse 7845 8175 8155 8203 8439 8551 +706 +376 +396 +348 +112 +8.9994% +4.5994% +4.8559% +4.2424% +1.3272%
MTAC_3P_Alternating 11361 11494 11351 11338 12050 12160 +799 +666 +809 +822 +110 +7.0328% +5.7943% +7.1271% +7.2500% +0.9129%
MTAC_3P_Standard 11473 11560 11477 11396 12069 12218 +745 +658 +741 +822 +149 +6.4935% +5.6920% +6.4564% +7.2131% +1.2346%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4390 4412 +284 +320 +312 +22 +6.8798% +7.8201% +7.6098% +0.5011%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4457 4470 +255 +222 +252 +256 +13 +6.0498% +5.2260% +5.9744% +6.0750% +0.2917%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4358 4371 +296 +237 +281 +274 +13 +7.2638% +5.7329% +6.8704% +6.6878% +0.2983%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4452 4500 +251 +263 +256 +269 +48 +5.9073% +6.2072% +6.0320% +6.3578% +1.0782%
Olsen_Astral_3P 13820 14378 14293 14296 14585
Olsen_Exploris_3P 7255 7582 7340 7479 7941 8051 +796 +469 +711 +572 +110 +10.9717% +6.1857% +9.6866% +7.6481% +1.3852%
SCIEX_3P 8652 9109 8679 8618 9438
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4115 4277 +1032 +888 +866 +959 +162 +31.8028% +26.2024% +25.3884% +28.9030% +3.9368%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4006 4190 +936 +757 +899 +756 +184 +28.7646% +22.0507% +27.3169% +22.0151% +4.5931%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3337 3757 +1307 +1361 +1307 +1360 +420 +53.3469% +56.8030% +53.3469% +56.7376% +12.5862%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3456 3650 +1142 +1214 +1016 +1008 +194 +45.5343% +49.8358% +38.5725% +38.1529% +5.6134%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6011 6162 +583 +506 +658 +616 +151 +10.4499% +8.9463% +11.9549% +11.1071% +2.5121%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5220 5331 +610 +493 +548 +520 +111 +12.9210% +10.1902% +11.4572% +10.8086% +2.1264%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6134 6372 +761 +717 +776 +819 +238 +13.5626% +12.6790% +13.8670% +14.7488% +3.8800%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6326 6508 +662 +559 +665 +703 +182 +11.3240% +9.3965% +11.3811% +12.1102% +2.8770%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1985 2058 +766 +634 +652 +770 +73 +59.2879% +44.5225% +46.3727% +59.7826% +3.6776%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2003 2144 +576 +484 +386 +271 +141 +36.7347% +29.1566% +21.9568% +14.4688% +7.0394%
SCP_Astral_250pg_3ms 307 8 350 283 1162 1143 +836 +1135 +793 +860 -19 +272.3127% +14187.5000% +226.5714% +303.8869% -1.6351%
SCP_Astral_250pg_6ms 637 756 751 766 1745 1839 +1202 +1083 +1088 +1073 +94 +188.6970% +143.2540% +144.8735% +140.0783% +5.3868%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2853 2948 +741 +673 +779 +718 +95 +33.5750% +29.5824% +35.9152% +32.1973% +3.3298%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2975 3061 +658 +673 +584 +522 +86 +27.3824% +28.1826% +23.5769% +20.5593% +2.8908%
SCP_Astral_500pg_3ms 525 902 828 2072 2156 +1631 +1254 +1328 +84 +310.6667% +139.0244% +160.3865% +4.0541%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2624 2763 +1445 +1316 +1277 +1328 +139 +109.6358% +90.9468% +85.9354% +92.5436% +5.2973%
SCP_Astral_MBR 4708 4720 4712 4715 5024 5207 +499 +487 +495 +492 +183 +10.5990% +10.3178% +10.5051% +10.4348% +3.6425%
Seer_Astral_45 5802 6297 6122 6133 6231
Seer_Astral_single 4685 4700 4632 5060 5093 +408 +393 +461 +33 +8.7086% +8.3617% +9.9525% +0.6522%
YEAST_KO_Astral 4565 4795 4676 4673 4737
EWZ_2P_MBR_Exploris 7041 7234 7464 +423 +230 +6.0077% +3.1794%
EWZ_2P_MBR_Exploris_Human 6167 6252 6372 +205 +120 +3.3241% +1.9194%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7138 7392 +505 +254 +7.3327% +3.5584%
MacCoss_Eclipse_Normalization_noNorm 5804 6247 6375 +571 +128 +9.8380% +2.0490%
MacCoss_Eclipse_Normalization_yesNorm 5804 6247 6375 +571 +128 +9.8380% +2.0490%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 604890
KEAP1KO_Eclipse 90611 91768 +1157
MTAC_3P_Alternating 65364 65757 +393
MTAC_3P_Standard 65728 66233 +505
MTAC_Yeast_Alternating_3min 12579 12643 +64
MTAC_Yeast_Alternating_5min 12857 12923 +66
MTAC_Yeast_Standard_3min 12560 12583 +23
MTAC_Yeast_Standard_5min 12943 13048 +105
Olsen_Astral_3P 238278
Olsen_Exploris_3P 156819 158509 +1690
SCIEX_3P 73546
SCP_Astral_1000pg_12ms 11409 11798 +389
SCP_Astral_1000pg_24ms 11204 11621 +417
SCP_Astral_1000pg_3ms 9020 9921 +901
SCP_Astral_1000pg_6ms 6450 6714 +264
SCP_Astral_10ng_12ms 17249 17639 +390
SCP_Astral_10ng_24ms 14758 15124 +366
SCP_Astral_10ng_3ms 17484 17981 +497
SCP_Astral_10ng_6ms 18141 18586 +445
SCP_Astral_250pg_12ms 5202 5453 +251
SCP_Astral_250pg_24ms 5557 5749 +192
SCP_Astral_250pg_3ms 2770 2706 -64
SCP_Astral_250pg_6ms 4489 4790 +301
SCP_Astral_500pg_12ms 7729 7937 +208
SCP_Astral_500pg_24ms 8124 8333 +209
SCP_Astral_500pg_3ms 5272 5515 +243
SCP_Astral_500pg_6ms 7098 7394 +296
SCP_Astral_MBR 20564 21121 +557
Seer_Astral_45 233431
Seer_Astral_single 5060 5093 +33
YEAST_KO_Astral 1341718
EWZ_2P_MBR_Exploris 247728 252026 +4298
EWZ_2P_MBR_Exploris_Human 115546 117230 +1684
EWZ_2P_MBR_Exploris_YeastHuman 131734 134402 +2668
MacCoss_Eclipse_Normalization_noNorm 187457 190738 +3281
MacCoss_Eclipse_Normalization_yesNorm 187457 190738 +3281

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0006 -0.0006 +0.0006 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0006 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0012 -0.0011 -0.0006 -0.0010 -0.0001 -0.0004 +0.0000
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0015 -0.0011 +0.0002 -0.0016 -0.0005 -0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0013 -0.0017 -0.0002 +0.0001 +0.0009 -0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0015 -0.0011 -0.0002 -0.0001 -0.0000 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0021 -0.0022 -0.0003 -0.0008 -0.0010 -0.0002 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0006 -0.0007 +0.0004 +0.0013 +0.0018 -0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 -0.0005 -0.0011 -0.0004
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0010 0.0006 +0.0007 +0.0003 +0.0017 +0.0001 -0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0021 -0.0014 +0.0009 +0.0016 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0019 0.0012 +0.0066 +0.0045 +0.0044 +0.0059 -0.0007
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0005 -0.0007 +0.0023 +0.0041 +0.0023 +0.0031 -0.0002
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0002 -0.0008 -0.0006 +0.0003 +0.0027 +0.0018 -0.0007
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0010 -0.0005 +0.0017 +0.0011 +0.0019 +0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0003 -0.0009 +0.0011 -0.0018 +0.0006 +0.0004 -0.0012
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0002 -0.0001 +0.0023 +0.0025 +0.0017 +0.0017 +0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 0.0005 0.0011 +0.0019 +0.0010 +0.0032 +0.0023 +0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0035 0.0043 +0.0081 +0.0083 +0.0040 +0.0095 +0.0007
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0000 -0.0007 -0.0005 +0.0005 +0.0017 +0.0024 -0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0040 0.0010 +0.0079 +0.0010 -0.0030
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0012 0.0026 +0.0076 +0.0052 +0.0075 +0.0013
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0001 0.0000 +0.0022 +0.0010 +0.0028 +0.0026 -0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0015 -0.0000 +0.0013 +0.0024 +0.0012 +0.0011 -0.0015
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0030 0.0018 +0.0031 +0.0041 +0.0053 -0.0012
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0024 0.0032 +0.0063 +0.0065 +0.0047 +0.0008
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 -0.0000 +0.0026 +0.0019 +0.0014 +0.0022 +0.0008
Seer_Astral_45_Entrapment -0.0023 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0009 +0.0031 +0.0007
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0026 0.0004 0.0000 +0.0026 -0.0004
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0026 -0.0031 -0.0002 -0.0005
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0041 -0.0042 -0.0032 -0.0031 -0.0047 -0.0049 -0.0001
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0031 -0.0009 +0.0003 +0.0016 +0.0020 +0.0016 +0.0022
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0023 +0.0042 +0.0029 +0.0025 +0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0009 -0.0034 +0.0007 +0.0004 +0.0014 -0.0000 -0.0025
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0033 -0.0033 +0.0025 +0.0015 -0.0013 -0.0005 +0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0048 -0.0012 -0.0002 +0.0008 -0.0007
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0043 -0.0036 -0.0033 +0.0007
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0023
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0001 +0.0028 +0.0000 +0.0027 +0.0008 +0.0004
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0027
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0022 -0.0029 +0.0020 +0.0013 +0.0014 -0.0006
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0060 -0.0036 +0.0034 +0.0022 +0.0034 +0.0034 +0.0024
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0016 -0.0022 +0.0038 +0.0037 +0.0050 +0.0050 -0.0038
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0007 -0.0024 -0.0006 +0.0025 +0.0019 +0.0021 -0.0017
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0065 -0.0060 -0.0006 -0.0020 -0.0006 +0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0035 -0.0026 +0.0006 -0.0003 -0.0010 +0.0019 +0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0006 0.0000 +0.0037 +0.0073 +0.0066 +0.0061 +0.0006
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0005 +0.0050 +0.0015 +0.0049 +0.0042 +0.0032
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0011 0.0000 +0.0053 +0.0076 +0.0034 +0.0064 -0.0011
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0011 -0.0021 +0.0020 +0.0021 +0.0004 -0.0008 -0.0032
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0117 0.0022 +0.0050 +0.0022 +0.0108 +0.0022 -0.0095
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0046 0.0034 +0.0133 +0.0101 +0.0119 +0.0122 -0.0012
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0032 0.0022 +0.0058 +0.0062 +0.0008 +0.0043 -0.0010
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0000 -0.0023 -0.0003 -0.0022 +0.0028 +0.0038 -0.0023
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0024 -0.0000 +0.0042 -0.0071 -0.0020 +0.0001 -0.0024
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0018 0.0037 +0.0081 +0.0082 +0.0044 +0.0092 +0.0019
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0002 -0.0023 +0.0037 +0.0007 +0.0003 +0.0027 -0.0021
Seer_Astral_45_Entrapment -0.0049 -0.0013
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0032 +0.0106 +0.0012
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0003 0.0002 +0.0015 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0005 -0.0004 -0.0001 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0005 -0.0006 -0.0005 -0.0009 -0.0004 -0.0005 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0004 +0.0005 -0.0006 -0.0000 -0.0001 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0009 -0.0012 -0.0002 +0.0001 +0.0003 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0007 -0.0009 -0.0005 -0.0001 +0.0001 -0.0000 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0015 -0.0015 -0.0006 -0.0007 -0.0007 -0.0004 +0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0004 -0.0002 +0.0006 +0.0008 +0.0012 +0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 -0.0001 -0.0003 -0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0010 0.0009 +0.0013 +0.0004 +0.0015 +0.0009 -0.0001
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0012 -0.0011 +0.0004 +0.0019 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 0.0007 0.0005 +0.0050 +0.0033 +0.0036 +0.0042 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0006 -0.0003 +0.0018 +0.0027 +0.0023 +0.0024 +0.0003
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0001 -0.0002 -0.0004 +0.0004 +0.0025 +0.0022 -0.0003
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 -0.0004 +0.0013 +0.0006 +0.0012 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 0.0002 -0.0006 +0.0007 -0.0010 +0.0006 +0.0002 -0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0002 0.0001 +0.0020 +0.0021 +0.0016 +0.0015 +0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0000 -0.0002 +0.0003 -0.0004 +0.0010 +0.0007 -0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0021 0.0033 +0.0063 +0.0060 +0.0035 +0.0064 +0.0012
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0006 0.0003 +0.0010 +0.0011 +0.0016 +0.0017 +0.0009
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0036 0.0038 +0.0097 +0.0038 +0.0001
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0020 0.0035 +0.0071 +0.0056 +0.0065 +0.0014
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0004 0.0008 +0.0027 +0.0012 +0.0028 +0.0022 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0016 0.0006 +0.0022 +0.0024 +0.0024 +0.0023 -0.0010
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0033 0.0024 +0.0005 +0.0027 +0.0039 -0.0009
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0017 0.0018 +0.0043 +0.0037 +0.0028 +0.0001
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0001 -0.0000 +0.0017 +0.0015 +0.0008 +0.0013 +0.0001
Seer_Astral_45_Entrapment -0.0011 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0009 +0.0031 +0.0008
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0007
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0016 0.0016 +0.0027 -0.0001
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0016 -0.0000 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0021 -0.0017 -0.0016 -0.0015 -0.0020 -0.0020 +0.0003
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0013 -0.0008 +0.0001 +0.0006 +0.0013 +0.0011 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0004 +0.0032 +0.0029 +0.0025 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0012 +0.0025 +0.0010 +0.0013 +0.0001 -0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0020 +0.0017 +0.0015 -0.0007 -0.0005 -0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0023 +0.0000 +0.0004 +0.0014 -0.0001
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0022 -0.0018 -0.0013 +0.0004
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0016
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0008 -0.0007 +0.0020 -0.0013 +0.0010 +0.0009 +0.0001
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0013 -0.0014 +0.0023 +0.0009 +0.0018 -0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0045 -0.0021 +0.0027 +0.0034 +0.0037 +0.0022 +0.0024
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0005 -0.0027 +0.0017 +0.0006 +0.0014 +0.0004 -0.0032
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0005 -0.0012 +0.0013 +0.0023 +0.0028 +0.0028 -0.0006
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0045 +0.0002 -0.0015 -0.0004 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0028 +0.0004 -0.0014 -0.0014 -0.0003 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0015 -0.0006 +0.0016 +0.0040 +0.0032 +0.0027 +0.0010
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0017 +0.0021 +0.0001 +0.0021 +0.0012 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0017 0.0010 +0.0049 +0.0051 +0.0029 +0.0040 -0.0006
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 0.0002 -0.0014 -0.0000 +0.0018 -0.0011 -0.0013 -0.0016
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0100 0.0024 +0.0084 +0.0105 +0.0070 +0.0024 -0.0076
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0018 0.0043 +0.0142 +0.0111 +0.0098 +0.0090 +0.0024
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0018 0.0016 +0.0056 +0.0052 +0.0024 +0.0044 -0.0002
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0003 -0.0006 +0.0014 -0.0006 +0.0038 +0.0039 -0.0003
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0000 0.0007 +0.0039 -0.0060 -0.0021 +0.0004 +0.0007
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0023 0.0033 +0.0053 +0.0055 +0.0024 +0.0061 +0.0010
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0005 -0.0019 +0.0004 -0.0002 +0.0003 +0.0009 -0.0014
Seer_Astral_45_Entrapment -0.0029 -0.0000
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0033 +0.0107 +0.0012
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0024

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 6613 4690 -19705 -1923

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 174 133 -638 -41

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0263 0.0284 -0.0032 +0.0020

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 450 398 -446 -52

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -61 -11 -201 +50

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 12 +4 +1 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 11 +4 +0 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 12 +3 +0 +1 -1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 1 +0 +1 -1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 1 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1652 0.1667 +0.0208 +0.0246 +0.0267 +0.0293 +0.0015
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1560 0.1568 +0.0175 +0.0206 +0.0217 +0.0244 +0.0008
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1615 0.1624 +0.0168 +0.0200 +0.0216 +0.0009
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1503 0.1501 -0.0030 +0.0091 +0.0125 +0.0145 -0.0002
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1710 0.1706 +0.0008 +0.0067 +0.0090 +0.0107 -0.0005
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1463 0.1479 -0.0024 +0.0112 +0.0142 +0.0156 +0.0016
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1532 +0.0052 +0.0033 +0.0036 +0.0027 +0.0000
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1542
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5939 0.5940 +0.0071 +0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2052 0.2087 +0.0371 +0.0035

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0848 +0.0085 +0.0109 +0.0121 +0.0128 +0.0004
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0811 +0.0087 +0.0108 +0.0111 +0.0122 +0.0006
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0751 0.0751 +0.0078 +0.0091 +0.0093 +0.0000
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0648 0.0652 -0.0126 +0.0049 +0.0060 +0.0064 +0.0004
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0800 0.0799 +0.0007 +0.0043 +0.0046 +0.0026 -0.0002
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0636 0.0645 -0.0126 +0.0078 +0.0076 +0.0076 +0.0009
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0985 0.0989 -0.0039 -0.0030 -0.0047 -0.0038 +0.0004
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1017
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5812 0.5812 -0.0069 +0.0000
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1380 0.1417 +0.0184 +0.0037

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 0.0008 0.0028 -0.0020 +0.0070 +0.0012 -0.0769 +0.0021
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0137 -0.0144 -0.0076 +0.0055 -0.0002 -0.0272 +0.0007
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0092 -0.0094 +0.0007 -0.0023 -0.0001 +0.0083 +0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0754 -0.0739 +0.0012 -0.0008 +0.0020 -0.0514 -0.0016
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0717 -0.0719 -0.0054 -0.0006 -0.0003 -0.0004 +0.0002
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0571 -0.0575 -0.0080 +0.0050 -0.0016 +0.0281 +0.0003
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0453 +0.0114 +0.0329 -0.0052 -0.0508
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1858 +0.0115 +0.0151 +0.0011 -0.0433
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1736 -0.0082 +0.0282 -0.0195 +0.1538
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0286 +0.0067 +0.0305 +0.0014 -0.0136
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3292 +0.0081 +0.0093 -0.0002 -0.0137
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1211 -0.0024 -0.0402 -0.0016 +0.0876
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2195 +0.0015 +0.0038 -0.0038 -0.0083
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2343 +0.0262 -0.0191 +0.0011 +0.0320
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1334 0.1320 -0.0059 -0.0059 +0.0211 -0.1031 -0.0014
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0845 -0.0847 +0.0062 +0.0047 -0.0191 +0.0240 +0.0003
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2000 0.1991 +0.0183 -0.0240 +0.0287 -0.0785 -0.0009
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1045 0.1042 +0.0048 -0.0054 -0.0067 +0.0163 -0.0003
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0481 +0.0009 +0.0001 -0.0089 +0.0026 -0.0001
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2158 0.2151 +0.0051 -0.0017 +0.0004 +0.0122 -0.0007
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1446 0.1437 -0.0032 -0.0062 -0.0160 +0.1222 -0.0009
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0785 -0.0787 +0.0043 -0.0045 -0.0054 -0.0235 +0.0002
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0507 0.0496 +0.0169 -0.0238 +0.0355 -0.0458 -0.0011
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0385 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0065 -0.0031 +0.0125 +0.0006 -0.0615
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0309 -0.0051 -0.0071 +0.0012 +0.0273
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0760 +0.0119 -0.0026 -0.0002 +0.0335
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0249
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0162 -0.0331 +0.0073 +0.0004 -0.0068
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0563
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1548 -0.0356 -0.0145 +0.0024 +0.0961
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1053 -0.0468 -0.0064 -0.0010 +0.0685

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0010 0.0012 +0.0009 +0.0076 -0.0005 -0.0723 +0.0002
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0150 -0.0158 -0.0089 +0.0045 +0.0004 -0.0261 +0.0007
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0001 0.0011 +0.0054 -0.0044 +0.0010 -0.0034 +0.0009
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0770 -0.0771 +0.0013 +0.0005 -0.0055 -0.0436 +0.0001
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0699 -0.0683 -0.0060 -0.0005 -0.0005 -0.0002 -0.0016
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0489 -0.0503 -0.0084 +0.0078 -0.0007 +0.0180 +0.0013
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0544 +0.0142 +0.0365 -0.0057 -0.0359
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1346 +0.0050 +0.0043 -0.0072 -0.0288
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1874 -0.0338 -0.0246 +0.0154 +0.1702
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0229 +0.0064 +0.0290 +0.0021 -0.0296
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3048 +0.0072 +0.0066 -0.0010 -0.0008
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1116 +0.0002 -0.0402 -0.0012 +0.0829
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1028 +0.0124 -0.0135 -0.0021 +0.0517
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1962 -0.0003 +0.0009 -0.0042 +0.0005
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1989 +0.0289 -0.0188 +0.0012 +0.0186
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1590 0.1554 -0.0077 -0.0028 +0.0144 -0.0621 -0.0036
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0790 -0.0820 +0.0048 +0.0016 -0.0170 +0.0233 +0.0030
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2372 0.2348 +0.0504 -0.0481 +0.0073 -0.0282 -0.0024
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0985 0.1004 +0.0031 -0.0032 -0.0081 +0.0226 +0.0019
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0444 -0.0446 +0.0011 -0.0008 -0.0084 +0.0023 +0.0002
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2255 0.2243 +0.0036 -0.0008 +0.0016 +0.0222 -0.0012
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1259 0.1332 +0.0005 -0.0096 -0.0297 +0.1213 +0.0073
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0774 -0.0754 +0.0056 -0.0034 -0.0033 -0.0311 -0.0020
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0658 0.0646 +0.0405 -0.0089 +0.0322 -0.0515 -0.0012
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0464 +0.0258 +0.0029 -0.0003 -0.0236
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0237 -0.0049 +0.0142 +0.0054 -0.0441
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0289 -0.0001 -0.0108 +0.0000 +0.0248
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0809 +0.0137 -0.0048 +0.0001 +0.0402
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0984 -0.0232 +0.0027 +0.0012 +0.0358
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0184 -0.0350 +0.0076 +0.0002 -0.0033
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0658 +0.0131 -0.0109 +0.0003 +0.0542
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1615 -0.0435 -0.0160 +0.0023 +0.1036
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.1007 -0.0508 -0.0078 +0.0009 +0.0564

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1266 0.1295 +0.0343 +0.0202 -0.0086 -0.1812 +0.0029
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1144 0.1169 +0.0169 -0.0058 +0.0004 -0.0955 +0.0025
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1190 0.1226 +0.0117 -0.0078 +0.0011 -0.1419 +0.0036
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1431 0.1417 +0.0441 -0.0007 -0.0136 -0.1549 -0.0014
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1266 0.1285 +0.0164 -0.0031 -0.0002 -0.0926 +0.0019
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1285 0.1342 +0.0170 -0.0063 +0.0017 -0.1395 +0.0057
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1525 +0.0354 +0.0384 -0.0420 -0.4231
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2166 +0.0422 -0.0321 -0.0167 -0.1334
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3611 +0.2175 -0.0279 -0.1166 -0.8801
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1400 +0.0427 +0.0074 -0.0036 -0.1164
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2295 +0.0473 +0.0030 -0.0078 -0.1061
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1770 +0.0549 +0.0262 -0.0056 -0.2031
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1429 +0.0358 +0.0129 -0.0110 -0.1886
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1910 +0.0274 +0.0045 -0.0018 -0.0944
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1946 +0.0778 +0.0001 -0.0169 -0.3438
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1875 0.1939 +0.0445 +0.0761 -0.1281 -0.3834 +0.0064
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0485 0.0467 -0.0103 +0.0134 -0.0147 -0.1027 -0.0018
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3018 0.2905 -0.0030 +0.1483 +0.0078 -0.6557 -0.0113
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1851 0.1838 +0.0037 +0.0045 +0.0051 -0.1654 -0.0013
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0430 0.0429 +0.0676 -0.0087 -0.0168 -0.1087 -0.0001
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1860 0.1858 +0.0316 +0.0062 -0.0049 -0.1493 -0.0002
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2052 0.2039 -0.0093 +0.0378 -0.0706 -0.3716 -0.0013
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0596 0.0583 +0.0977 -0.0155 +0.0159 -0.1882 -0.0014
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4715 0.3571 +0.0737 +0.1982 -0.0827 -0.8036 -0.1144
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1056 +0.0321 -0.0450 -0.0051 -0.3770
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1288 +0.0200 -0.0293 -0.0344 -0.4130
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0783 +0.0068 -0.0387 -0.0080 -0.0284
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0871 +0.0190 -0.0584 -0.0028 -0.0649
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0977 +0.0281 -0.0478 -0.0031 -0.0967
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0885 +0.0273 -0.0601 -0.0037 -0.0455
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1008 +0.0130 -0.0614 -0.0008 -0.0842
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1632 +0.0619 -0.0455 -0.0143 -0.4108
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1083 +0.0688 -0.0494 -0.0103 -0.3888

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0570 0.0587 +0.0149 -0.0182 -0.0054 -0.0638 +0.0017
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0350 0.0351 +0.0035 +0.0005 +0.0043 -0.0465 +0.0002
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0396 0.0454 -0.0157 -0.0104 +0.0083 -0.0726 +0.0058
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0483 0.0459 -0.0042 +0.0002 -0.0084 -0.0713 -0.0024
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0383 0.0390 +0.0032 -0.0030 +0.0035 -0.0334 +0.0007
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0521 0.0568 +0.0000 +0.0073 -0.0081 -0.0733 +0.0047
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0444 +0.0402 -0.0136 +0.0467 -0.2213
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0756 +0.0316 -0.0208 -0.0112 -0.0330
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.0864 +0.1306 -0.0136 -0.0647 -0.3064
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0220 +0.0032 +0.0034 -0.0021 -0.0245
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0454 +0.0110 -0.0047 +0.0013 -0.0171
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0271 +0.0055 -0.0000 +0.0038 -0.0350
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0294 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0097
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0363 +0.0296 -0.0022 -0.0025 -0.0845
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0480 0.0472 +0.0146 +0.0452 -0.0355 -0.1797 -0.0007
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0174 0.0169 -0.0057 -0.0062 -0.0031 -0.0312 -0.0005
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0995 0.0745 -0.1294 +0.1626 +0.0090 -0.4010 -0.0250
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0336 0.0329 -0.0046 +0.0074 +0.0016 -0.0355 -0.0007
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0094 0.0097 +0.0109 -0.0066 +0.0090 -0.0340 +0.0003
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0353 0.0356 -0.0053 +0.0093 +0.0025 -0.0471 +0.0003
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0632 0.0758 -0.0166 +0.0170 -0.0166 -0.1543 +0.0126
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0192 0.0189 +0.0068 -0.0006 -0.0039 -0.0545 -0.0003
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1308 0.1262 -0.0891 -0.0032 -0.0082 -0.2996 -0.0046
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0565 +0.0682 -0.0593 -0.0056 -0.1658
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0758 +0.0668 -0.0849 -0.0031 -0.1677
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0332 +0.0113 -0.0357 +0.0198 -0.0196
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0243 -0.0054 -0.0154 +0.0040 -0.0244
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0262 -0.0011 -0.0225 +0.0112 -0.0346
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0243 +0.0094 -0.0181 -0.0013 -0.0214
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0342 -0.0134 -0.0199 -0.0090 -0.0333
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0576 +0.0271 -0.0671 +0.0055 -0.2016
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0403 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 118.1000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 13.5100 27.6000 +3.5300 +10.2800 +7.7300 +10.4700 +14.0900 +14.6656% +59.3533% +38.9029% +61.1208% +104.2931%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.4300 18.3900 +5.6400 +9.3200 +10.0300 +9.1000 +10.9600 +44.2353% +102.7563% +119.9761% +97.9548% +147.5101%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.2800 17.3300 +5.0200 +8.3700 +7.6700 +6.5200 +10.0500 +40.7799% +93.4152% +79.3996% +60.3145% +138.0495%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.7800 6.2700 +2.0400 +1.8600 +1.3300 +1.4900 +48.2270% +42.1769% +26.9231% +31.1715%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4000 6.5300 +1.1500 +2.1500 +1.7800 +1.9900 +1.1300 +21.3755% +49.0868% +37.4737% +43.8326% +20.9259%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.5600 6.4900 +1.0600 +2.3500 +2.0500 +1.8300 +1.9300 +19.5212% +56.7633% +46.1712% +39.2704% +42.3246%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9700 6.5000 +0.9500 +2.0800 +1.9700 +2.0400 +1.5300 +17.1171% +47.0588% +43.4879% +45.7399% +30.7847%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 48.4900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 16.6200 20.2600 -7.4000 +0.5000 +1.9400 +0.9800 +3.6400 -26.7534% +2.5304% +10.5895% +5.0830% +21.9013%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.8600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.0300 5.3400 -0.4500 +0.7500 +0.6900 +1.2500 +0.3100 -7.7720% +16.3399% +14.8387% +30.5623% +6.1630%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4200 6.8400 +0.5800 +2.4400 +0.9600 +1.4200 +9.2652% +55.4545% +16.3265% +26.1993%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.5400 5.3200 +0.8000 +1.5900 +0.5200 +1.6800 +0.7800 +17.6991% +42.6273% +10.8333% +46.1538% +17.1806%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.2100 4.7000 -1.0400 +1.1900 +0.7800 +1.2600 +0.4900 -18.1185% +33.9031% +19.8980% +36.6279% +11.6390%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.2500 8.6900 +1.6200 +3.1600 +3.1800 +2.9500 +3.4400 +22.9137% +57.1429% +57.7132% +51.3937% +65.5238%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.4100 9.8100 +2.2200 +4.0800 +3.6700 +4.2700 +4.4000 +29.2490% +71.2042% +59.7720% +77.0758% +81.3309%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2600 5.9800 -0.4700 +1.3100 +1.6800 +1.5700 +0.7200 -7.2868% +28.0514% +39.0698% +35.6009% +13.6882%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.1400 7.5100 +0.1300 +2.5800 +2.8800 +1.8900 +2.3700 +1.7615% +52.3327% +62.2030% +33.6299% +46.1089%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.7700 4.4300 -0.3100 +0.7700 +1.0400 -0.3400 -6.5401% +21.0383% +30.6785% -7.1279%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.6800 4.5200 -0.7400 +0.6800 +0.7600 -0.1600 -14.0684% +17.7083% +20.2128% -3.4188%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.8300 4.1700 -0.4800 +0.7400 +0.4600 +0.7200 +0.3400 -10.3226% +21.5743% +12.3989% +20.8696% +8.8773%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.6900 4.6500 +0.4800 +1.3600 +0.9600 +1.3800 -0.0400 +11.5108% +41.3374% +26.0163% +42.2018% -0.8529%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2300 4.4300 -0.8500 +0.9000 +0.8300 +0.9400 +0.2000 -16.0985% +25.4958% +23.0556% +26.9341% +4.7281%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.8700 5.2000 -0.3100 +1.3800 +1.0500 +0.3900 +0.3300 -5.6261% +36.1257% +25.3012% +8.1081% +6.7762%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5 4.9700 +0.2400 +1.5100 +1.4000 -0.0300 +5.0740% +43.6416% +39.2157% -0.6000%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.5400 5.0500 +0.4000 +1.4300 +1.3200 +1.2700 +0.5100 +8.6022% +39.5028% +35.3887% +33.5979% +11.2335%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5000 8.8600 -0.1800 +2.3100 +2.7600 +1.3600 -1.9912% +35.2672% +45.2459% +18.1333%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 67.1900
Seer_Astral_single 4.4700 4.1400 5.5800 5.8300 7.4500 +2.9800 +3.3100 +1.8700 +1.6200 +66.6667% +79.9517% +33.5125% +27.7873%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 148
EWZ_2P_MBR_Exploris 26.1800 19.1700 33.0600 +6.8800 +13.8900 +26.2796% +72.4570%
EWZ_2P_MBR_Exploris_Human 12.9100 11.3400 17.7800 +4.8700 +6.4400 +37.7227% +56.7901%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.8500 21.1100 +9.0500 +9.2600 +75.0415% +78.1435%
MacCoss_Eclipse_Normalization_noNorm 27.5100 27.3400 51.1700 +23.6600 +23.8300 +86.0051% +87.1617%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.1700 51.4200 +23.7500 +23.2500 +85.8330% +82.5346%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png