Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6780461
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1284406 1282283 +185789 -24722 -29672 -11258 -2123 +16.9439% -1.8915% -2.2617% -0.8703% -0.1653%
MTAC_3P_Alternating 586322 615762 610710 599881 617552 620474 +34152 +4712 +9764 +20593 +2922 +5.8248% +0.7652% +1.5988% +3.4328% +0.4732%
MTAC_3P_Standard 596590 623022 617574 607435 624112 621209 +24619 -1813 +3635 +13774 -2903 +4.1266% -0.2910% +0.5886% +2.2676% -0.4651%
MTAC_Yeast_Alternating_3min 137548 136839 135560 143527 142854 +5306 +6015 +7294 -673 +3.8576% +4.3957% +5.3806% -0.4689%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 162146 161914 +6273 +5363 +5405 +6879 -232 +4.0304% +3.4257% +3.4535% +4.4371% -0.1431%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 144902 145501 +6992 +6116 +6209 +7616 +599 +5.0480% +4.3878% +4.4575% +5.5234% +0.4134%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 163364 162953 +3991 +4221 +3793 +5031 -411 +2.5107% +2.6592% +2.3831% +3.1857% -0.2516%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3430707
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1315141 1318044 +295308 +163375 +194171 +133960 +2903 +28.8743% +14.1491% +17.2770% +11.3134% +0.2207%
SCIEX_3P 672242 749525 722698 714454 737429
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 50408 50606 +9724 +8906 +8181 +8506 +198 +23.7855% +21.3573% +19.2834% +20.2043% +0.3928%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 48770 48428 +7359 +6026 +6405 +7276 -342 +17.9186% +14.2116% +15.2417% +17.6808% -0.7013%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 39091 38901 +30161 +15786 +15886 +15988 -190 +345.0915% +68.2933% +69.0245% +69.7770% -0.4860%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 27013 27028 +10093 +9475 +8619 +8680 +15 +59.5985% +53.9794% +46.8195% +47.3076% +0.0555%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 111950 112037 +12129 +9146 +13054 +13389 +87 +12.1402% +8.8890% +13.1881% +13.5725% +0.0777%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 82425 82895 +11797 +10167 +11450 +11769 +470 +16.5926% +13.9795% +16.0263% +16.5467% +0.5702%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 118105 116498 +10794 +10001 +10876 +12064 -1607 +10.2115% +9.3909% +10.2971% +11.5518% -1.3607%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 124016 123401 +8244 +6085 +9079 +10320 -615 +7.1589% +5.1868% +7.9416% +9.1262% -0.4959%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 17755 17621 +7427 +6815 +6383 +6388 -134 +72.8566% +63.0668% +56.7984% +56.8682% -0.7547%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 19443 19415 +4608 +3982 +3374 +3716 -28 +31.1204% +25.8019% +21.0336% +23.6703% -0.1440%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 7838 7943 +6682 +5911 +5493 +5557 +105 +529.8969% +290.8957% +224.2041% +232.9003% +1.3396%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 13463 13714 +12278 +8931 +8024 +7983 +251 +855.0139% +186.7238% +141.0193% +139.2951% +1.8644%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 30138 29684 +7974 +7789 +7104 +7221 -454 +36.7296% +35.5743% +31.4615% +32.1462% -1.5064%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 29951 30311 +4451 +4168 +4051 +4686 +360 +17.2119% +15.9431% +15.4265% +18.2868% +1.2020%
SCP_Astral_500pg_3ms 3484 6898 6834 17468 17467 +13983 +10569 +10633 -1 +401.3490% +153.2183% +155.5897% -0.0057%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 25826 25869 +15170 +14395 +12987 +12980 +43 +141.7890% +125.4576% +100.8151% +100.7060% +0.1665%
SCP_Astral_MBR 92167 93585 91884 90864 105889 106420 +14253 +12835 +14536 +15556 +531 +15.4643% +13.7148% +15.8199% +17.1201% +0.5015%
Seer_Astral_45 2512737 3124006 3135497 2971207 3002843
Seer_Astral_single 56699 55793 55891 58025 58422 +1723 +2629 +2531 +397 +3.0389% +4.7121% +4.5285% +0.6842%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17320764
EWZ_2P_MBR_Exploris 1776128 1855012 1870876 +94748 +15864 +5.3345% +0.8552%
EWZ_2P_MBR_Exploris_Human 836809 876894 880833 +44024 +3939 +5.2609% +0.4492%
EWZ_2P_MBR_Exploris_YeastHuman 914924 975923 980327 +65403 +4404 +7.1485% +0.4513%
MacCoss_Eclipse_Normalization_noNorm 2078034 2237537 2243297 +165263 +5760 +7.9529% +0.2574%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2237537 2243297 +165263 +5760 +7.9529% +0.2574%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 113299
KEAP1KO_Eclipse 111504 133619 131359 132031 145905 146313 +34809 +12694 +14954 +14282 +408 +31.2177% +9.5001% +11.3841% +10.8172% +0.2796%
MTAC_3P_Alternating 108267 117352 114659 114816 121363 121218 +12951 +3866 +6559 +6402 -145 +11.9621% +3.2944% +5.7204% +5.5759% -0.1195%
MTAC_3P_Standard 110265 118693 115800 116148 122895 121820 +11555 +3127 +6020 +5672 -1075 +10.4793% +2.6345% +5.1986% +4.8834% -0.8747%
MTAC_Yeast_Alternating_3min 48858 49032 48995 53863 53851 +4993 +4819 +4856 -12 +10.2194% +9.8283% +9.9112% -0.0223%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 60319 60120 +6151 +5045 +4280 +4236 -199 +11.3973% +9.1602% +7.6648% +7.5800% -0.3299%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 55005 55126 +6505 +5461 +4837 +4666 +121 +13.3790% +10.9957% +9.6184% +9.2469% +0.2200%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 60460 60454 +5394 +4535 +3747 +3627 -6 +9.7966% +8.1099% +6.6076% +6.3825% -0.0099%
Olsen_Astral_3P 198770 231103 234505 234149 237050
Olsen_Exploris_3P 51272 58784 55047 58593 70903 71407 +20135 +12623 +16360 +12814 +504 +39.2709% +21.4735% +29.7201% +21.8695% +0.7108%
SCIEX_3P 82206 93920 87927 87858 99825
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 19045 18962 +4522 +4004 +3713 +3255 -83 +31.3158% +26.7683% +24.3491% +20.7232% -0.4358%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 18005 17955 +3472 +2890 +3039 +2885 -50 +23.9729% +19.1835% +20.3741% +19.1440% -0.2777%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 15749 15583 +6843 +6207 +6194 +6219 -166 +78.2952% +66.2009% +65.9708% +66.4139% -1.0540%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 15297 15347 +6449 +6088 +5563 +5537 +50 +72.4770% +65.7522% +56.8581% +56.4424% +0.3269%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 40288 40471 +5606 +4174 +6129 +6046 +183 +16.0792% +11.4996% +17.8470% +17.5628% +0.4542%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 29919 30129 +5480 +4663 +5010 +4906 +210 +22.2321% +18.3107% +19.9451% +19.4505% +0.7019%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 43088 42683 +5995 +5007 +5034 +5262 -405 +16.3405% +13.2896% +13.3709% +14.0616% -0.9399%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 44504 44271 +4115 +2726 +4228 +4378 -233 +10.2475% +6.5616% +10.5586% +10.9744% -0.5235%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7199 7118 +3452 +3169 +2909 +2872 -81 +94.1626% +80.2482% +69.1138% +67.6401% -1.1252%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 7756 7638 +2339 +2027 +1783 +1572 -118 +44.1404% +36.1255% +30.4526% +25.9149% -1.5214%
SCP_Astral_250pg_3ms 675 721 908 879 3595 3718 +3043 +2997 +2810 +2839 +123 +450.8148% +415.6727% +309.4714% +322.9807% +3.4214%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 5562 5658 +4222 +3920 +3513 +3495 +96 +294.0111% +225.5466% +163.7762% +161.5811% +1.7260%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 11774 11584 +3790 +3612 +3332 +3178 -190 +48.6271% +45.3086% +40.3781% +37.8063% -1.6137%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 11262 11501 +2343 +2159 +2130 +2087 +239 +25.5842% +23.1107% +22.7297% +22.1691% +2.1222%
SCP_Astral_500pg_3ms 1846 2600 2586 7448 7427 +5581 +4827 +4841 -21 +302.3294% +185.6538% +187.2003% -0.2820%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 10188 10214 +6340 +6059 +5440 +5409 +26 +163.6551% +145.8243% +113.9506% +112.5702% +0.2552%
SCP_Astral_MBR 24110 24991 24570 24544 28870 28962 +4852 +3971 +4392 +4418 +92 +20.1244% +15.8897% +17.8755% +18.0003% +0.3187%
Seer_Astral_45 69584 90103 87204 87620 88560
Seer_Astral_single 56699 55793 55891 58025 58422 +1723 +2629 +2531 +397 +3.0389% +4.7121% +4.5285% +0.6842%
YEAST_KO_Astral 66823 87888 87428 86498 84463
EWZ_2P_MBR_Exploris 55271 59611 60464 +5193 +853 +9.3955% +1.4309%
EWZ_2P_MBR_Exploris_Human 48465 52005 52382 +3917 +377 +8.0821% +0.7249%
EWZ_2P_MBR_Exploris_YeastHuman 51246 55877 56141 +4895 +264 +9.5520% +0.4725%
MacCoss_Eclipse_Normalization_noNorm 73278 78120 78244 +4966 +124 +6.7769% +0.1587%
MacCoss_Eclipse_Normalization_yesNorm 73278 78120 78244 +4966 +124 +6.7769% +0.1587%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 630477
KEAP1KO_Eclipse 87920 92888 93982 93441 89619 89744 +1824 -3144 -4238 -3697 +125 +2.0746% -3.3847% -4.5094% -3.9565% +0.1395%
MTAC_3P_Alternating 63773 63974 63611 63015 65078 65043 +1270 +1069 +1432 +2028 -35 +1.9914% +1.6710% +2.2512% +3.2183% -0.0538%
MTAC_3P_Standard 64317 64464 64219 63385 65667 65709 +1392 +1245 +1490 +2324 +42 +2.1643% +1.9313% +2.3202% +3.6665% +0.0640%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12564 12569 +502 +599 +629 +5 +4.1601% +5.0042% +5.2680% +0.0398%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12801 12743 +311 +272 +381 +415 -58 +2.5016% +2.1811% +3.0820% +3.3663% -0.4531%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12487 12532 +524 +485 +572 +564 +45 +4.3638% +4.0259% +4.7826% +4.7126% +0.3604%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12856 12876 +315 +411 +399 +466 +20 +2.5078% +3.2972% +3.1979% +3.7550% +0.1556%
Olsen_Astral_3P 236395 245756 242430 240719 237342
Olsen_Exploris_3P 146224 153534 153990 155827 155394 155610 +9386 +2076 +1620 -217 +216 +6.4189% +1.3521% +1.0520% -0.1393% +0.1390%
SCIEX_3P 70810 74366 72157 71550 73172
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10883 11041 +1878 +1513 +1456 +1707 +158 +20.4955% +15.8795% +15.1904% +18.2880% +1.4518%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 10595 10638 +1340 +877 +1226 +1085 +43 +14.4117% +8.9847% +13.0259% +11.3577% +0.4059%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 8821 8679 +6229 +2595 +2432 +2563 -142 +254.2449% +42.6529% +38.9307% +41.9065% -1.6098%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6131 6128 +1425 +1540 +1170 +1205 -3 +30.2998% +33.5658% +23.5982% +24.4769% -0.0489%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16853 16929 +739 +649 +904 +874 +76 +4.5645% +3.9865% +5.6412% +5.4438% +0.4510%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14483 14391 +792 +550 +703 +720 -92 +5.8240% +3.9737% +5.1359% +5.2666% -0.6352%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16887 16880 +628 +604 +763 +955 -7 +3.8641% +3.7110% +4.7341% +5.9969% -0.0415%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17617 17750 +733 +572 +837 +1005 +133 +4.3075% +3.3298% +4.9489% +6.0018% +0.7550%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 4941 4854 +1207 +941 +990 +1315 -87 +33.0957% +24.0480% +25.6211% +37.1574% -1.7608%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5427 5305 +1005 +702 +508 +328 -122 +23.3721% +15.2509% +10.5900% +6.5903% -2.2480%
SCP_Astral_250pg_3ms 576 22 936 741 2680 2682 +2106 +2660 +1746 +1941 +2 +365.6250% +12090.9091% +186.5385% +261.9433% +0.0746%
SCP_Astral_250pg_6ms 637 2080 2029 2046 3771 4032 +3395 +1952 +2003 +1986 +261 +532.9670% +93.8462% +98.7186% +97.0674% +6.9212%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7435 7545 +1300 +1199 +1529 +1418 +110 +20.8167% +18.8938% +25.4156% +23.1435% +1.4795%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7593 7546 +824 +817 +534 +523 -47 +12.2583% +12.1415% +7.6155% +7.4470% -0.6190%
SCP_Astral_500pg_3ms 982 2365 2177 4719 4845 +3863 +2480 +2668 +126 +393.3809% +104.8626% +122.5540% +2.6701%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 6659 6544 +2836 +2537 +2499 +2626 -115 +76.4833% +63.3142% +61.7800% +67.0240% -1.7270%
SCP_Astral_MBR 20165 20129 20074 19793 20378 20299 +134 +170 +225 +506 -79 +0.6645% +0.8446% +1.1209% +2.5565% -0.3877%
Seer_Astral_45 225377 241455 241952 237727 233526
Seer_Astral_single 4685 4700 4632 4849 4866 +181 +166 +234 +17 +3.8634% +3.5319% +5.0518% +0.3506%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1339502
EWZ_2P_MBR_Exploris 245259 244802 245732 +473 +930 +0.1929% +0.3799%
EWZ_2P_MBR_Exploris_Human 115447 114079 114742 -705 +663 -0.6107% +0.5812%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130613 130664 +1696 +51 +1.3151% +0.0390%
MacCoss_Eclipse_Normalization_noNorm 178174 187043 187586 +9412 +543 +5.2825% +0.2903%
MacCoss_Eclipse_Normalization_yesNorm 178174 187043 187586 +9412 +543 +5.2825% +0.2903%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6583
KEAP1KO_Eclipse 7845 8175 8155 8203 8224 8258 +413 +83 +103 +55 +34 +5.2645% +1.0153% +1.2630% +0.6705% +0.4134%
MTAC_3P_Alternating 11361 11494 11351 11338 11831 11840 +479 +346 +489 +502 +9 +4.2162% +3.0103% +4.3080% +4.4276% +0.0761%
MTAC_3P_Standard 11473 11560 11477 11396 12025 11969 +496 +409 +492 +573 -56 +4.3232% +3.5381% +4.2868% +5.0281% -0.4657%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4354 4344 +216 +252 +244 -10 +5.2326% +6.1584% +5.9512% -0.2297%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4404 4379 +164 +131 +161 +165 -25 +3.8909% +3.0838% +3.8170% +3.9155% -0.5677%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4321 4339 +264 +205 +249 +242 +18 +6.4785% +4.9589% +6.0880% +5.9068% +0.4166%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4397 4403 +154 +166 +159 +172 +6 +3.6244% +3.9179% +3.7465% +4.0652% +0.1365%
Olsen_Astral_3P 13820 14378 14293 14296 14381
Olsen_Exploris_3P 7255 7582 7340 7479 7744 7768 +513 +186 +428 +289 +24 +7.0710% +2.4532% +5.8311% +3.8642% +0.3099%
SCIEX_3P 8652 9109 8679 8618 9355
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3916 3927 +682 +538 +516 +609 +11 +21.0169% +15.8749% +15.1275% +18.3544% +0.2809%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3764 3781 +527 +348 +490 +347 +17 +16.1955% +10.1369% +14.8891% +10.1048% +0.4516%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3262 3193 +743 +797 +743 +796 -69 +30.3265% +33.2638% +30.3265% +33.2082% -2.1153%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3259 3247 +739 +811 +613 +605 -12 +29.4657% +33.2923% +23.2726% +22.8993% -0.3682%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5846 5876 +297 +220 +372 +330 +30 +5.3235% +3.8897% +6.7587% +5.9502% +0.5132%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5069 5025 +304 +187 +242 +214 -44 +6.4393% +3.8652% +5.0596% +4.4481% -0.8680%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5893 5904 +293 +249 +308 +351 +11 +5.2219% +4.4032% +5.5039% +6.3209% +0.1867%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6105 6170 +324 +221 +327 +365 +65 +5.5423% +3.7149% +5.5964% +6.2877% +1.0647%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1855 1836 +544 +412 +430 +548 -19 +42.1053% +28.9326% +30.5832% +42.5466% -1.0243%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1982 1965 +397 +305 +207 +92 -17 +25.3189% +18.3735% +11.7747% +4.9119% -0.8577%
SCP_Astral_250pg_3ms 307 8 350 283 1112 1112 +805 +1104 +762 +829 +0 +262.2150% +13800% +217.7143% +292.9329% +0%
SCP_Astral_250pg_6ms 637 756 751 766 1449 1564 +927 +808 +813 +798 +115 +145.5259% +106.8783% +108.2557% +104.1775% +7.9365%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2723 2730 +523 +455 +561 +500 +7 +23.6973% +20% +25.8645% +22.4215% +0.2571%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2749 2727 +324 +339 +250 +188 -22 +13.4831% +14.1960% +10.0929% +7.4045% -0.8003%
SCP_Astral_500pg_3ms 525 902 828 1832 1912 +1387 +1010 +1084 +80 +264.1905% +111.9734% +130.9179% +4.3668%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2446 2376 +1058 +929 +890 +941 -70 +80.2731% +64.2018% +59.8923% +65.5749% -2.8618%
SCP_Astral_MBR 4708 4720 4712 4715 4934 4884 +176 +164 +172 +169 -50 +3.7383% +3.4746% +3.6503% +3.5843% -1.0134%
Seer_Astral_45 5802 6297 6122 6133 6123
Seer_Astral_single 4685 4700 4632 4849 4866 +181 +166 +234 +17 +3.8634% +3.5319% +5.0518% +0.3506%
YEAST_KO_Astral 4565 4795 4676 4673 4730
EWZ_2P_MBR_Exploris 7041 7029 7064 +23 +35 +0.3267% +0.4979%
EWZ_2P_MBR_Exploris_Human 6167 6076 6126 -41 +50 -0.6648% +0.8229%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6956 6983 +96 +27 +1.3939% +0.3882%
MacCoss_Eclipse_Normalization_noNorm 5804 6128 6155 +351 +27 +6.0476% +0.4406%
MacCoss_Eclipse_Normalization_yesNorm 5804 6128 6155 +351 +27 +6.0476% +0.4406%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 630467
KEAP1KO_Eclipse 89599 89716 +117
MTAC_3P_Alternating 65077 65037 -40
MTAC_3P_Standard 65657 65703 +46
MTAC_Yeast_Alternating_3min 12558 12567 +9
MTAC_Yeast_Alternating_5min 12789 12729 -60
MTAC_Yeast_Standard_3min 12476 12514 +38
MTAC_Yeast_Standard_5min 12851 12874 +23
Olsen_Astral_3P 237315
Olsen_Exploris_3P 155392 155608 +216
SCIEX_3P 73165
SCP_Astral_1000pg_12ms 10883 11041 +158
SCP_Astral_1000pg_24ms 10595 10638 +43
SCP_Astral_1000pg_3ms 8821 8679 -142
SCP_Astral_1000pg_6ms 6125 6118 -7
SCP_Astral_10ng_12ms 16852 16928 +76
SCP_Astral_10ng_24ms 14483 14391 -92
SCP_Astral_10ng_3ms 16884 16878 -6
SCP_Astral_10ng_6ms 17617 17750 +133
SCP_Astral_250pg_12ms 4939 4854 -85
SCP_Astral_250pg_24ms 5427 5305 -122
SCP_Astral_250pg_3ms 2680 2682 +2
SCP_Astral_250pg_6ms 3771 4032 +261
SCP_Astral_500pg_12ms 7435 7545 +110
SCP_Astral_500pg_24ms 7593 7546 -47
SCP_Astral_500pg_3ms 4719 4841 +122
SCP_Astral_500pg_6ms 6659 6544 -115
SCP_Astral_MBR 20378 20299 -79
Seer_Astral_45 233525
Seer_Astral_single 4849 4866 +17
YEAST_KO_Astral 1339497
EWZ_2P_MBR_Exploris 244790 245716 +926
EWZ_2P_MBR_Exploris_Human 114069 114730 +661
EWZ_2P_MBR_Exploris_YeastHuman 130608 130661 +53
MacCoss_Eclipse_Normalization_noNorm 187042 187585 +543
MacCoss_Eclipse_Normalization_yesNorm 187042 187585 +543

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0015 -0.0007 +0.0005 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0008 -0.0007 -0.0000 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0013 -0.0013 -0.0008 -0.0012 -0.0003 -0.0006 -0.0000
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0016 -0.0013 +0.0001 -0.0017 -0.0007 -0.0006 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0019 -0.0019 -0.0003 +0.0000 +0.0007 +0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0010 -0.0019 -0.0015 -0.0007 -0.0005 -0.0004 -0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0019 -0.0000 -0.0006 -0.0007 +0.0001 +0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0011 -0.0012 -0.0002 +0.0008 +0.0012 -0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0008 -0.0012 -0.0018 -0.0004
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0004 0.0009 +0.0011 +0.0006 +0.0020 +0.0004 +0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0031 -0.0030 -0.0008 -0.0001 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0000 -0.0007 +0.0047 +0.0026 +0.0024 +0.0039 -0.0007
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0017 0.0010 +0.0040 +0.0058 +0.0040 +0.0049 -0.0007
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0021 -0.0028 -0.0026 -0.0017 +0.0007 -0.0002 -0.0007
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0016 -0.0010 +0.0012 +0.0007 +0.0014 +0.0006
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0019 -0.0022 -0.0002 -0.0031 -0.0008 -0.0009 -0.0004
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0010 -0.0012 +0.0013 +0.0015 +0.0007 +0.0006 -0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0011 -0.0007 +0.0001 -0.0008 +0.0014 +0.0005 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0015 -0.0019 +0.0020 +0.0022 -0.0021 +0.0034 -0.0034
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0021 -0.0027 -0.0025 -0.0015 -0.0003 +0.0004 -0.0005
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 -0.0011 0.0003 +0.0072 +0.0003 +0.0014
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0019 0.0005 +0.0056 +0.0031 +0.0054 +0.0024
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0032 -0.0027 -0.0005 -0.0017 +0.0001 -0.0001 +0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0017 0.0008 +0.0021 +0.0032 +0.0021 +0.0019 -0.0009
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0011 0.0019 +0.0031 +0.0041 +0.0053 +0.0007
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0004 0.0014 +0.0045 +0.0047 +0.0029 +0.0010
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 -0.0012 +0.0015 +0.0008 +0.0003 +0.0010 -0.0002
Seer_Astral_45_Entrapment -0.0023 -0.0008
Seer_Astral_single_Entrapment -0.0022 -0.0001 -0.0001 +0.0021 -0.0001
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0024
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0015 -0.0022 +0.0004 -0.0007
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0046 -0.0050 -0.0021 -0.0004
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0037 -0.0042 -0.0032 -0.0031 -0.0047 -0.0049 -0.0005
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0044 -0.0041 -0.0028 -0.0016 -0.0011 -0.0015 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0033 +0.0033 +0.0019 +0.0015 -0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 0.0007 -0.0018 +0.0023 +0.0020 +0.0030 +0.0015 -0.0025
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0052 -0.0050 +0.0008 -0.0003 -0.0030 -0.0023 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0009 -0.0016 +0.0020 +0.0029 +0.0040 -0.0007
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0042 -0.0049 -0.0046 -0.0007
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0031
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0023 +0.0007 -0.0021 +0.0006 -0.0014 -0.0006
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0041
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0032 -0.0035 +0.0014 +0.0007 +0.0008 -0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 0.0033 -0.0028 +0.0042 +0.0030 +0.0042 +0.0043 -0.0060
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0004 0.0024 +0.0083 +0.0083 +0.0096 +0.0096 +0.0020
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0025 -0.0035 -0.0018 +0.0014 +0.0008 +0.0010 -0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0066 -0.0058 -0.0004 -0.0018 -0.0004 +0.0008
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0032 -0.0045 -0.0013 -0.0022 -0.0029 -0.0000 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0021 -0.0048 -0.0011 +0.0026 +0.0019 +0.0013 -0.0027
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0034 +0.0020 -0.0014 +0.0020 +0.0012 +0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0041 0.0012 +0.0065 +0.0088 +0.0046 +0.0076 -0.0029
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0024 -0.0029 +0.0013 +0.0013 -0.0003 -0.0016 -0.0004
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0053 0.0012 +0.0040 +0.0012 +0.0098 +0.0012 -0.0041
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0000 0.0000 +0.0099 +0.0067 +0.0085 +0.0088 +0.0000
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0017 0.0016 +0.0052 +0.0056 +0.0002 +0.0037 -0.0000
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0013 -0.0021 -0.0001 -0.0020 +0.0030 +0.0040 -0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0031 -0.0006 +0.0035 -0.0077 -0.0026 -0.0005 -0.0037
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0000 0.0000 +0.0045 +0.0045 +0.0008 +0.0056 +0.0000
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0028 0.0000 +0.0059 +0.0030 +0.0025 +0.0050 +0.0028
Seer_Astral_45_Entrapment -0.0049 -0.0047
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0019 +0.0093 +0.0019
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0004
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0009 -0.0005 +0.0008 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0006 -0.0005 -0.0002 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0007 -0.0007 -0.0006 -0.0010 -0.0005 -0.0006 -0.0000
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0006 +0.0003 -0.0008 -0.0002 -0.0003 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0013 -0.0012 -0.0002 +0.0001 +0.0002 +0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0011 -0.0007 -0.0004 -0.0001 -0.0003 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0014 -0.0014 -0.0005 -0.0006 -0.0006 -0.0003 +0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0009 -0.0006 +0.0002 +0.0004 +0.0009 +0.0003
MacCoss_Eclipse_Normalization_Entrapment 0.0002 -0.0001 -0.0005 -0.0008 -0.0005
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0006
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0003 0.0007 +0.0012 +0.0002 +0.0014 +0.0008 +0.0004
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0022 -0.0017 -0.0002 +0.0012 +0.0005
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0003 -0.0006 +0.0040 +0.0022 +0.0025 +0.0031 -0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 0.0017 0.0012 +0.0032 +0.0041 +0.0038 +0.0038 -0.0005
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0013 -0.0017 -0.0019 -0.0012 +0.0010 +0.0006 -0.0005
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0012 -0.0008 +0.0008 +0.0001 +0.0007 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0013 -0.0011 +0.0003 -0.0014 +0.0001 -0.0003 +0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0008 -0.0010 +0.0010 +0.0011 +0.0006 +0.0005 -0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0012 -0.0009 -0.0004 -0.0012 +0.0003 -0.0001 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0020 -0.0007 +0.0023 +0.0020 -0.0004 +0.0025 -0.0026
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0012 -0.0022 -0.0015 -0.0014 -0.0009 -0.0008 -0.0010
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0006 0.0018 +0.0078 +0.0018 +0.0012
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0000 0.0011 +0.0047 +0.0032 +0.0041 +0.0011
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0010 -0.0008 +0.0011 -0.0004 +0.0012 +0.0005 +0.0002
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0014 0.0002 +0.0018 +0.0019 +0.0020 +0.0019 -0.0012
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0007 0.0015 -0.0004 +0.0019 +0.0031 +0.0008
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0011 0.0013 +0.0038 +0.0032 +0.0023 +0.0002
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0003 -0.0004 +0.0013 +0.0011 +0.0004 +0.0009 -0.0001
Seer_Astral_45_Entrapment -0.0011 -0.0003
Seer_Astral_single_Entrapment -0.0022 -0.0001 -0.0001 +0.0021 -0.0001
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0016
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0002 -0.0005 +0.0006 -0.0003
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0026 -0.0025 -0.0009 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0019 -0.0022 -0.0021 -0.0019 -0.0025 -0.0024 -0.0003
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0019 -0.0016 -0.0008 -0.0002 +0.0005 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0003 -0.0012 +0.0024 +0.0021 +0.0017 -0.0009
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 0.0005 -0.0003 +0.0034 +0.0018 +0.0022 +0.0010 -0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0028 -0.0022 +0.0016 +0.0013 -0.0008 -0.0007 +0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0014 -0.0016 +0.0007 +0.0011 +0.0021 -0.0002
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0026 -0.0021 -0.0005
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0018
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0015 -0.0017 +0.0009 -0.0024 -0.0001 -0.0001 -0.0003
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0023
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0021 -0.0036 +0.0002 -0.0013 -0.0003 -0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 0.0013 -0.0020 +0.0029 +0.0036 +0.0038 +0.0023 -0.0033
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0010 0.0014 +0.0058 +0.0047 +0.0055 +0.0045 +0.0004
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0022 -0.0041 -0.0016 -0.0006 -0.0001 -0.0001 -0.0019
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0044 +0.0004 -0.0013 -0.0002 +0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0031 -0.0034 -0.0002 -0.0020 -0.0019 -0.0008 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0023 -0.0031 -0.0010 +0.0015 +0.0007 +0.0002 -0.0008
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0028 +0.0010 -0.0010 +0.0010 +0.0001 +0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0039 0.0016 +0.0054 +0.0057 +0.0035 +0.0046 -0.0023
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0018 -0.0019 -0.0006 +0.0013 -0.0016 -0.0018 -0.0001
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0014 0.0059 +0.0119 +0.0140 +0.0105 +0.0059 +0.0044
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0016 0.0014 +0.0114 +0.0082 +0.0069 +0.0062 +0.0030
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0023 0.0027 +0.0066 +0.0062 +0.0034 +0.0054 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0013 -0.0009 +0.0010 -0.0010 +0.0034 +0.0035 +0.0004
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0021 -0.0017 +0.0015 -0.0083 -0.0045 -0.0020 -0.0038
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0007 0.0012 +0.0032 +0.0034 +0.0003 +0.0040 +0.0019
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0027 -0.0003 +0.0020 +0.0014 +0.0019 +0.0025 +0.0024
Seer_Astral_45_Entrapment -0.0029 -0.0010
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0025 +0.0099 +0.0025
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 2195 9716 -14679 +7521

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -19 193 -578 +212

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0199 -0.0117 +0.0199

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 110 326 -518 +216

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -8 -10 -200 -2

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 14 14 +4 +1 +1 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 12 +4 +0 +1 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 12 13 +3 +0 +1 -2 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 0 0 +0 +1 +0 -2 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 0 0 +0 +1 +0 -2 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 0 +0 +1 +0 -1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 0 +0 +1 -1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1634 0.1650 +0.0191 +0.0229 +0.0250 +0.0276 +0.0016
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1552 0.1547 +0.0154 +0.0185 +0.0196 +0.0223 -0.0005
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1576 0.1575 +0.0120 +0.0151 +0.0167 -0.0001
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1474 0.1476 -0.0055 +0.0067 +0.0100 +0.0120 +0.0002
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1685 0.1693 -0.0005 +0.0054 +0.0077 +0.0093 +0.0008
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1445 0.1446 -0.0057 +0.0080 +0.0109 +0.0124 +0.0001
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1531 +0.0051 +0.0032 +0.0036 +0.0026 -0.0000
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1536
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5931 0.5934 +0.0065 +0.0003
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2012 0.2008 +0.0292 -0.0004

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0841 0.0841 +0.0078 +0.0102 +0.0114 +0.0121 +0.0001
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0803 0.0803 +0.0079 +0.0100 +0.0103 +0.0115 -0.0000
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0737 0.0740 +0.0068 +0.0080 +0.0082 +0.0004
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0649 0.0635 -0.0143 +0.0032 +0.0042 +0.0047 -0.0014
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0787 0.0799 +0.0006 +0.0042 +0.0045 +0.0026 +0.0011
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0632 0.0636 -0.0134 +0.0069 +0.0068 +0.0068 +0.0005
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0470
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0987 0.0985 -0.0043 -0.0034 -0.0051 -0.0042 -0.0002
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1012
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5808 0.5819 -0.0062 +0.0011
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1362 0.1363 +0.0130 +0.0002

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0035 -0.0026 -0.0020 +0.0070 +0.0012 -0.0742 -0.0009
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0146 -0.0155 -0.0076 +0.0055 -0.0002 -0.0262 +0.0008
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0075 -0.0083 +0.0007 -0.0023 -0.0001 +0.0066 +0.0009
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0726 -0.0728 +0.0012 -0.0008 +0.0020 -0.0543 +0.0002
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0707 -0.0700 -0.0054 -0.0006 -0.0003 -0.0015 -0.0007
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0577 -0.0570 -0.0080 +0.0050 -0.0016 +0.0286 -0.0007
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0481 +0.0114 +0.0329 -0.0052 -0.0480
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1834 +0.0115 +0.0151 +0.0011 -0.0457
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1791 -0.0082 +0.0282 -0.0195 +0.1593
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0329 +0.0067 +0.0305 +0.0014 -0.0093
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3275 +0.0081 +0.0093 -0.0002 -0.0154
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1236 -0.0024 -0.0402 -0.0016 +0.0901
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1225 +0.0108 -0.0145 +0.0012 +0.0495
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2185 +0.0015 +0.0038 -0.0038 -0.0093
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2388 +0.0262 -0.0191 +0.0011 +0.0365
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1347 0.1277 -0.0059 -0.0059 +0.0211 -0.1017 -0.0070
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0842 -0.0843 +0.0062 +0.0047 -0.0191 +0.0237 +0.0001
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2015 0.1973 +0.0183 -0.0240 +0.0287 -0.0770 -0.0043
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1038 0.1044 +0.0048 -0.0054 -0.0067 +0.0156 +0.0006
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0480 +0.0009 +0.0001 -0.0089 +0.0026 -0.0001
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2149 0.2154 +0.0051 -0.0017 +0.0004 +0.0113 +0.0005
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1482 0.1494 -0.0032 -0.0062 -0.0160 +0.1258 +0.0012
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0795 -0.0783 +0.0043 -0.0045 -0.0054 -0.0225 -0.0012
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0442 0.0530 +0.0169 -0.0238 +0.0355 -0.0523 +0.0088
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0335 +0.0195 +0.0041 +0.0006 -0.0438
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 0.0007 -0.0031 +0.0125 +0.0006 -0.0674
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0303 -0.0051 -0.0071 +0.0012 +0.0267
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0765 +0.0119 -0.0026 -0.0002 +0.0340
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0248
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0149 -0.0331 +0.0073 +0.0004 -0.0081
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0564
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1523 -0.0356 -0.0145 +0.0024 +0.0936
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1005 -0.0468 -0.0064 -0.0010 +0.0637

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0080 0.0094 +0.0009 +0.0076 -0.0005 -0.0653 +0.0015
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0148 -0.0132 -0.0089 +0.0045 +0.0004 -0.0263 -0.0016
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0007 0.0008 +0.0054 -0.0044 +0.0010 -0.0029 +0.0001
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0693 -0.0678 +0.0013 +0.0005 -0.0055 -0.0513 -0.0015
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0694 -0.0692 -0.0060 -0.0005 -0.0005 -0.0007 -0.0002
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0546 -0.0541 -0.0084 +0.0078 -0.0007 +0.0236 -0.0006
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0517 +0.0142 +0.0365 -0.0057 -0.0387
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1335 +0.0050 +0.0043 -0.0072 -0.0299
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1920 -0.0338 -0.0246 +0.0154 +0.1748
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0269 +0.0064 +0.0290 +0.0021 -0.0255
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3006 +0.0072 +0.0066 -0.0010 -0.0050
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1154 +0.0002 -0.0402 -0.0012 +0.0866
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1070 +0.0124 -0.0135 -0.0021 +0.0560
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1976 -0.0003 +0.0009 -0.0042 +0.0019
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2026 +0.0289 -0.0188 +0.0012 +0.0223
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1578 0.1569 -0.0077 -0.0028 +0.0144 -0.0633 -0.0009
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0767 -0.0789 +0.0048 +0.0016 -0.0170 +0.0210 +0.0022
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2340 0.2394 +0.0504 -0.0481 +0.0073 -0.0314 +0.0054
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.1002 0.0992 +0.0031 -0.0032 -0.0081 +0.0243 -0.0011
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0438 -0.0447 +0.0011 -0.0008 -0.0084 +0.0017 +0.0009
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2253 0.2232 +0.0036 -0.0008 +0.0016 +0.0220 -0.0020
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1313 0.1327 +0.0005 -0.0096 -0.0297 +0.1267 +0.0014
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0800 -0.0794 +0.0056 -0.0034 -0.0033 -0.0285 -0.0006
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0598 0.0670 +0.0405 -0.0089 +0.0322 -0.0574 +0.0072
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0499 +0.0258 +0.0029 -0.0003 -0.0201
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0205 -0.0049 +0.0142 +0.0054 -0.0473
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0264 -0.0001 -0.0108 +0.0000 +0.0223
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0819 +0.0137 -0.0048 +0.0001 +0.0412
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0977 -0.0232 +0.0027 +0.0012 +0.0352
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0176 -0.0350 +0.0076 +0.0002 -0.0041
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0664 +0.0131 -0.0109 +0.0003 +0.0548
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1598 -0.0435 -0.0160 +0.0023 +0.1020
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0931 -0.0508 -0.0078 +0.0009 +0.0488

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1258 0.1299 +0.0343 +0.0202 -0.0086 -0.1820 +0.0041
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1101 0.1136 +0.0169 -0.0058 +0.0004 -0.0998 +0.0035
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1125 0.1151 +0.0117 -0.0078 +0.0011 -0.1483 +0.0026
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1308 0.1324 +0.0441 -0.0007 -0.0136 -0.1672 +0.0016
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1234 0.1239 +0.0164 -0.0031 -0.0002 -0.0959 +0.0006
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1269 0.1261 +0.0170 -0.0063 +0.0017 -0.1411 -0.0009
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1721 +0.0354 +0.0384 -0.0420 -0.4036
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2153 +0.0422 -0.0321 -0.0167 -0.1348
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3083 +0.2175 -0.0279 -0.1166 -0.9328
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1373 +0.0427 +0.0074 -0.0036 -0.1191
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2297 +0.0473 +0.0030 -0.0078 -0.1059
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1773 +0.0549 +0.0262 -0.0056 -0.2028
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1390 +0.0358 +0.0129 -0.0110 -0.1925
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1927 +0.0274 +0.0045 -0.0018 -0.0927
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1932 +0.0778 +0.0001 -0.0169 -0.3452
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.2070 0.2085 +0.0445 +0.0761 -0.1281 -0.3638 +0.0015
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0477 0.0447 -0.0103 +0.0134 -0.0147 -0.1035 -0.0030
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2703 0.2699 -0.0030 +0.1483 +0.0078 -0.6872 -0.0004
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1850 0.1858 +0.0037 +0.0045 +0.0051 -0.1654 +0.0008
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0420 0.0436 +0.0676 -0.0087 -0.0168 -0.1098 +0.0017
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1833 0.1847 +0.0316 +0.0062 -0.0049 -0.1521 +0.0015
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2082 0.2227 -0.0093 +0.0378 -0.0706 -0.3686 +0.0145
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0563 0.0557 +0.0977 -0.0155 +0.0159 -0.1915 -0.0007
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3837 0.4635 +0.0737 +0.1982 -0.0827 -0.8914 +0.0798
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1070 +0.0321 -0.0450 -0.0051 -0.3757
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1330 +0.0200 -0.0293 -0.0344 -0.4089
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0731 +0.0068 -0.0387 -0.0080 -0.0336
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0861 +0.0190 -0.0584 -0.0028 -0.0659
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0956 +0.0281 -0.0478 -0.0031 -0.0987
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0875 +0.0273 -0.0601 -0.0037 -0.0465
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0890 +0.0130 -0.0614 -0.0008 -0.0959
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1480 +0.0619 -0.0455 -0.0143 -0.4260
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1024 +0.0688 -0.0494 -0.0103 -0.3948

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0673 0.0545 +0.0149 -0.0182 -0.0054 -0.0534 -0.0129
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0360 0.0347 +0.0035 +0.0005 +0.0043 -0.0455 -0.0013
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0437 0.0430 -0.0157 -0.0104 +0.0083 -0.0685 -0.0007
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0471 0.0468 -0.0042 +0.0002 -0.0084 -0.0725 -0.0003
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0368 0.0378 +0.0032 -0.0030 +0.0035 -0.0348 +0.0010
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0486 0.0493 +0.0000 +0.0073 -0.0081 -0.0769 +0.0008
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0796 +0.0402 -0.0136 +0.0467 -0.1860
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0780 +0.0316 -0.0208 -0.0112 -0.0306
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1184 +0.1306 -0.0136 -0.0647 -0.2744
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0243 +0.0032 +0.0034 -0.0021 -0.0222
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0441 +0.0110 -0.0047 +0.0013 -0.0184
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0244 +0.0055 -0.0000 +0.0038 -0.0376
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0277 +0.0026 +0.0079 -0.0036 -0.0354
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0098
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0353 +0.0296 -0.0022 -0.0025 -0.0855
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0517 0.0484 +0.0146 +0.0452 -0.0355 -0.1759 -0.0034
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0188 0.0188 -0.0057 -0.0062 -0.0031 -0.0297 -0.0000
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0643 0.0651 -0.1294 +0.1626 +0.0090 -0.4363 +0.0008
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0327 0.0331 -0.0046 +0.0074 +0.0016 -0.0363 +0.0003
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0095 0.0092 +0.0109 -0.0066 +0.0090 -0.0338 -0.0004
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0368 0.0343 -0.0053 +0.0093 +0.0025 -0.0455 -0.0026
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0636 0.0689 -0.0166 +0.0170 -0.0166 -0.1538 +0.0053
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0207 0.0197 +0.0068 -0.0006 -0.0039 -0.0531 -0.0009
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1671 0.1367 -0.0891 -0.0032 -0.0082 -0.2633 -0.0304
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0496 +0.0682 -0.0593 -0.0056 -0.1728
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0620 +0.0668 -0.0849 -0.0031 -0.1815
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0330 +0.0113 -0.0357 +0.0198 -0.0198
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0246 -0.0054 -0.0154 +0.0040 -0.0242
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0269 -0.0011 -0.0225 +0.0112 -0.0339
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0236 +0.0094 -0.0181 -0.0013 -0.0221
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0373 -0.0134 -0.0199 -0.0090 -0.0302
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0432 +0.0271 -0.0671 +0.0055 -0.2161
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0427 +0.0501 -0.0498 +0.0220 -0.2327

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 119.5600
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 16.0500 16.0900 -7.9800 -1.2300 -3.7800 -1.0400 +0.0400 -33.1533% -7.1016% -19.0237% -6.0712% +0.2492%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.6100 7.5500 -5.2000 -1.5200 -0.8100 -1.7400 -1.0600 -40.7843% -16.7585% -9.6890% -18.7298% -12.3113%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.7400 7.9800 -4.3300 -0.9800 -1.6800 -2.8300 +0.2400 -35.1747% -10.9375% -17.3913% -26.1795% +3.1008%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.1100 4.4100 +0.1800 +0 -0.5300 +0.3000 +4.2553% +0% -10.7287% +7.2993%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.2700 4.5700 -0.8100 +0.1900 -0.1800 +0.0300 +0.3000 -15.0558% +4.3379% -3.7895% +0.6608% +7.0258%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.1000 4.8600 -0.5700 +0.7200 +0.4200 +0.2000 +0.7600 -10.4972% +17.3913% +9.4595% +4.2918% +18.5366%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5600 4.3100 -1.2400 -0.1100 -0.2200 -0.1500 -0.2500 -22.3423% -2.4887% -4.8565% -3.3632% -5.4825%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 21.8200
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 14.0700 13.2300 -14.4300 -6.5300 -5.0900 -6.0500 -0.8400 -52.1692% -33.0466% -27.7838% -31.3797% -5.9701%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 10.2600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3400 4.4600 -1.3300 -0.1300 -0.1900 +0.3700 +0.1200 -22.9706% -2.8322% -4.0860% +9.0465% +2.7650%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 4.6300 5.1100 -1.1500 +0.7100 -0.7700 +0.4800 -18.3706% +16.1364% -13.0952% +10.3672%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.4000 4.7400 +0.2200 +1.0100 -0.0600 +1.1000 +0.3400 +4.8673% +27.0777% -1.2500% +30.2198% +7.7273%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.1600 3.8400 -1.9000 +0.3300 -0.0800 +0.4000 -0.3200 -33.1010% +9.4017% -2.0408% +11.6279% -7.6923%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4300 5.8200 -1.2500 +0.2900 +0.3100 +0.0800 +0.3900 -17.6803% +5.2441% +5.6261% +1.3937% +7.1823%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.5500 5.7900 -1.8000 +0.0600 -0.3500 +0.2500 +0.2400 -23.7154% +1.0471% -5.7003% +4.5126% +4.3243%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2300 4.5200 -1.9300 -0.1500 +0.2200 +0.1100 -0.7100 -29.9225% -3.2120% +5.1163% +2.4943% -13.5755%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.8800 5.3800 -2 +0.4500 +0.7500 -0.2400 +0.5000 -27.1003% +9.1278% +16.1987% -4.2705% +10.2459%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.3600 4.7300 -0.0100 +1.0700 +1.3400 +0.3700 -0.2110% +29.2350% +39.5280% +8.4862%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.3300 4.4700 -0.7900 +0.6300 +0.7100 +0.1400 -15.0190% +16.4062% +18.8830% +3.2333%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 4 3.9300 -0.7200 +0.5000 +0.2200 +0.4800 -0.0700 -15.4839% +14.5773% +5.9299% +13.9130% -1.7500%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.4700 4.1900 +0.0200 +0.9000 +0.5000 +0.9200 -0.2800 +0.4796% +27.3556% +13.5501% +28.1346% -6.2640%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2000 4.8700 -0.4100 +1.3400 +1.2700 +1.3800 +0.6700 -7.7652% +37.9603% +35.2778% +39.5415% +15.9524%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.2900 4.5800 -0.9300 +0.7600 +0.4300 -0.2300 +0.2900 -16.8784% +19.8953% +10.3614% -4.7817% +6.7599%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.4000 4.5900 -0.1400 +1.1300 +1.0200 +0.1900 -2.9598% +32.6590% +28.5714% +4.3182%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.7000 4.4400 -0.2100 +0.8200 +0.7100 +0.6600 -0.2600 -4.5161% +22.6519% +19.0349% +17.4603% -5.5319%
SCP_Astral_MBR 9.0400 6.5500 6.1000 6.7300 7.9200 -1.1200 +1.3700 +1.8200 +1.1900 -12.3894% +20.9160% +29.8361% +17.6820%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 85.2100
Seer_Astral_single 4.4700 4.1400 5.5800 5.2300 5.4900 +1.0200 +1.3500 -0.0900 +0.2600 +22.8188% +32.6087% -1.6129% +4.9713%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 114.6600
EWZ_2P_MBR_Exploris 26.1800 20.0200 19.7400 -6.4400 -0.2800 -24.5989% -1.3986%
EWZ_2P_MBR_Exploris_Human 12.9100 11.2900 11.7700 -1.1400 +0.4800 -8.8304% +4.2516%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 12.3500 12.8600 +0.8000 +0.5100 +6.6335% +4.1296%
MacCoss_Eclipse_Normalization_noNorm 27.5100 26.9000 28.2700 +0.7600 +1.3700 +2.7626% +5.0929%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 27.3700 28.5100 +0.8400 +1.1400 +3.0358% +4.1651%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png