Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6888679
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 608185 613139 -483355 -693866 -698816 -680402 +4954 -44.0819% -53.0882% -53.2652% -52.6000% +0.8146%
MTAC_3P_Alternating 586322 615762 610710 599881 652236 651033 +64711 +35271 +40323 +51152 -1203 +11.0368% +5.7280% +6.6026% +8.5270% -0.1844%
MTAC_3P_Standard 596590 623022 617574 607435 656932 658532 +61942 +35510 +40958 +51097 +1600 +10.3827% +5.6996% +6.6321% +8.4119% +0.2436%
MTAC_Yeast_Alternating_3min 137548 136839 135560 153294 153616 +16068 +16777 +18056 +322 +11.6817% +12.2604% +13.3196% +0.2101%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 172644 171891 +16250 +15340 +15382 +16856 -753 +10.4407% +9.7987% +9.8282% +10.8724% -0.4362%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 155556 155584 +17075 +16199 +16292 +17699 +28 +12.3277% +11.6218% +11.6963% +12.8361% +0.0180%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 174491 175096 +16134 +16364 +15936 +17174 +605 +10.1496% +10.3092% +10.0126% +10.8750% +0.3467%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3524174
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1355717 1357844 +335108 +203175 +233971 +173760 +2127 +32.7658% +17.5960% +20.8183% +14.6746% +0.1569%
SCIEX_3P 672242 749525 722698 714454 788923
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 57601 57592 +16710 +15892 +15167 +15492 -9 +40.8737% +38.1103% +35.7501% +36.7981% -0.0156%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 55600 55061 +13992 +12659 +13038 +13909 -539 +34.0695% +29.8547% +31.0259% +33.7991% -0.9694%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 45883 45812 +37072 +22697 +22797 +22899 -71 +424.1648% +98.1917% +99.0528% +99.9389% -0.1547%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 31148 31075 +14140 +13522 +12666 +12727 -73 +83.4957% +77.0353% +68.8033% +69.3645% -0.2344%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 121305 121575 +21667 +18684 +22592 +22927 +270 +21.6870% +18.1590% +22.8241% +23.2412% +0.2226%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 90651 90872 +19774 +18144 +19427 +19746 +221 +27.8123% +24.9478% +27.1915% +27.7620% +0.2438%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 132682 132920 +27216 +26423 +27298 +28486 +238 +25.7474% +24.8110% +25.8450% +27.2766% +0.1794%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 136551 136605 +21448 +19289 +22283 +23524 +54 +18.6250% +16.4419% +19.4914% +20.8028% +0.0395%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 20028 20347 +10153 +9541 +9109 +9114 +319 +99.5978% +88.2935% +81.0553% +81.1359% +1.5928%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 22362 22723 +7916 +7290 +6682 +7024 +361 +53.4612% +47.2364% +41.6558% +44.7417% +1.6143%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 9715 9506 +8245 +7474 +7056 +7120 -209 +653.8462% +367.8150% +288% +298.4074% -2.1513%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16417 16671 +15235 +11888 +10981 +10940 +254 +1060.9331% +248.5469% +192.9877% +190.8916% +1.5472%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 34100 33727 +12017 +11832 +11147 +11264 -373 +55.3524% +54.0397% +49.3667% +50.1447% -1.0938%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 34343 34371 +8511 +8228 +8111 +8746 +28 +32.9118% +31.4731% +30.8873% +34.1307% +0.0815%
SCP_Astral_500pg_3ms 3484 6898 6834 21767 21921 +18437 +15023 +15087 +154 +529.1906% +217.7878% +220.7638% +0.7075%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 30618 30872 +20173 +19398 +17990 +17983 +254 +188.5503% +169.0605% +139.6522% +139.5221% +0.8296%
SCP_Astral_MBR 92167 93585 91884 90864 114850 115099 +22932 +21514 +23215 +24235 +249 +24.8809% +22.9887% +25.2656% +26.6717% +0.2168%
Seer_Astral_45 2512737 3124006 3135497 2971207 3092364
Seer_Astral_single 56699 55793 55891 65741 65735 +9036 +9942 +9844 -6 +15.9368% +17.8194% +17.6129% -0.0091%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17800873
EWZ_2P_MBR_Exploris 1776128 1935085 1938279 +162151 +3194 +9.1295% +0.1651%
EWZ_2P_MBR_Exploris_Human 836809 913118 912837 +76028 -281 +9.0855% -0.0308%
EWZ_2P_MBR_Exploris_YeastHuman 914924 1013218 1018132 +103208 +4914 +11.2805% +0.4850%
MacCoss_Eclipse_Normalization_noNorm 2078034 2338235 2346366 +268332 +8131 +12.9128% +0.3477%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2338235 2346366 +268332 +8131 +12.9128% +0.3477%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 106278
KEAP1KO_Eclipse 111504 133619 131359 132031 122143 122803 +11299 -10816 -8556 -9228 +660 +10.1333% -8.0947% -6.5134% -6.9893% +0.5404%
MTAC_3P_Alternating 108267 117352 114659 114816 129348 129838 +21571 +12486 +15179 +15022 +490 +19.9239% +10.6398% +13.2384% +13.0835% +0.3788%
MTAC_3P_Standard 110265 118693 115800 116148 130706 131286 +21021 +12593 +15486 +15138 +580 +19.0641% +10.6097% +13.3731% +13.0334% +0.4437%
MTAC_Yeast_Alternating_3min 48858 49032 48995 57837 57939 +9081 +8907 +8944 +102 +18.5865% +18.1657% +18.2549% +0.1764%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 64331 64554 +10585 +9479 +8714 +8670 +223 +19.6131% +17.2111% +15.6053% +15.5143% +0.3466%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 59179 59006 +10385 +9341 +8717 +8546 -173 +21.3591% +18.8080% +17.3338% +16.9362% -0.2923%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 65231 65348 +10288 +9429 +8641 +8521 +117 +18.6851% +16.8619% +15.2380% +14.9946% +0.1794%
Olsen_Astral_3P 198770 231103 234505 234149 250287
Olsen_Exploris_3P 51272 58784 55047 58593 75867 75976 +24704 +17192 +20929 +17383 +109 +48.1822% +29.2461% +38.0202% +29.6674% +0.1437%
SCIEX_3P 82206 93920 87927 87858 110056
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 22344 22309 +7869 +7351 +7060 +6602 -35 +54.4945% +49.1443% +46.2981% +42.0322% -0.1566%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 21285 21081 +6598 +6016 +6165 +6011 -204 +45.5569% +39.9336% +41.3315% +39.8872% -0.9584%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 18919 19014 +10274 +9638 +9625 +9650 +95 +117.5515% +102.7944% +102.5136% +103.0543% +0.5021%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 18005 18034 +9136 +8775 +8250 +8224 +29 +102.6748% +94.7727% +84.3213% +83.8328% +0.1611%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 44766 44764 +9899 +8467 +10422 +10339 -2 +28.3924% +23.3270% +30.3477% +30.0334% -0.0045%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 33668 33653 +9004 +8187 +8534 +8430 -15 +36.5289% +32.1487% +33.9743% +33.4219% -0.0446%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 49878 49919 +13231 +12243 +12270 +12498 +41 +36.0636% +32.4955% +32.5905% +33.3984% +0.0822%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 50428 50384 +10228 +8839 +10341 +10491 -44 +25.4707% +21.2757% +25.8247% +26.2978% -0.0873%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 8381 8595 +4929 +4646 +4386 +4349 +214 +134.4517% +117.6500% +104.2053% +102.4258% +2.5534%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 9030 9274 +3975 +3663 +3419 +3208 +244 +75.0142% +65.2825% +58.3945% +52.8849% +2.7021%
SCP_Astral_250pg_3ms 675 721 908 879 4690 4608 +3933 +3887 +3700 +3729 -82 +582.6667% +539.1123% +407.4890% +424.2321% -1.7484%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 7011 7234 +5798 +5496 +5089 +5071 +223 +403.7604% +316.2255% +237.2494% +234.4429% +3.1807%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 13576 13528 +5734 +5556 +5276 +5122 -48 +73.5694% +69.6939% +63.9360% +60.9327% -0.3536%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 13377 13314 +4156 +3972 +3943 +3900 -63 +45.3811% +42.5177% +42.0766% +41.4277% -0.4710%
SCP_Astral_500pg_3ms 1846 2600 2586 9601 9597 +7751 +6997 +7011 -4 +419.8808% +269.1154% +271.1137% -0.0417%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 12710 12729 +8855 +8574 +7955 +7924 +19 +228.5751% +206.3538% +166.6318% +164.9116% +0.1495%
SCP_Astral_MBR 24110 24991 24570 24544 32512 32766 +8656 +7775 +8196 +8222 +254 +35.9021% +31.1112% +33.3578% +33.4990% +0.7812%
Seer_Astral_45 69584 90103 87204 87620 96927
Seer_Astral_single 56699 55793 55891 65741 65735 +9036 +9942 +9844 -6 +15.9368% +17.8194% +17.6129% -0.0091%
YEAST_KO_Astral 66823 87888 87428 86498 88214
EWZ_2P_MBR_Exploris 55271 65069 65638 +10367 +569 +18.7567% +0.8745%
EWZ_2P_MBR_Exploris_Human 48465 56412 56597 +8132 +185 +16.7791% +0.3279%
EWZ_2P_MBR_Exploris_YeastHuman 51246 60691 61177 +9931 +486 +19.3791% +0.8008%
MacCoss_Eclipse_Normalization_noNorm 73278 83455 84203 +10925 +748 +14.9090% +0.8963%
MacCoss_Eclipse_Normalization_yesNorm 73278 83455 84203 +10925 +748 +14.9090% +0.8963%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 628405
KEAP1KO_Eclipse 87920 92888 93982 93441 41912 42036 -45884 -50852 -51946 -51405 +124 -52.1884% -54.7455% -55.2723% -55.0133% +0.2959%
MTAC_3P_Alternating 63773 63974 63611 63015 67210 67079 +3306 +3105 +3468 +4064 -131 +5.1840% +4.8535% +5.4519% +6.4493% -0.1949%
MTAC_3P_Standard 64317 64464 64219 63385 67612 67707 +3390 +3243 +3488 +4322 +95 +5.2708% +5.0307% +5.4314% +6.8186% +0.1405%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12889 12923 +856 +953 +983 +34 +7.0937% +7.9616% +8.2328% +0.2638%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 13151 13152 +720 +681 +790 +824 +1 +5.7915% +5.4607% +6.3906% +6.6840% +0.0076%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12807 12846 +838 +799 +886 +878 +39 +6.9787% +6.6324% +7.4080% +7.3362% +0.3045%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 13241 13248 +687 +783 +771 +838 +7 +5.4693% +6.2816% +6.1794% +6.7526% +0.0529%
Olsen_Astral_3P 236395 245756 242430 240719 242596
Olsen_Exploris_3P 146224 153534 153990 155827 161261 161593 +15369 +8059 +7603 +5766 +332 +10.5106% +5.2490% +4.9373% +3.7003% +0.2059%
SCIEX_3P 70810 74366 72157 71550 75925
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 12069 12014 +2851 +2486 +2429 +2680 -55 +31.1143% +26.0915% +25.3417% +28.7122% -0.4557%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11923 11952 +2654 +2191 +2540 +2399 +29 +28.5438% +22.4465% +26.9868% +25.1125% +0.2432%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 10182 10201 +7751 +4117 +3954 +4085 +19 +316.3673% +67.6693% +63.2944% +66.7920% +0.1866%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6871 6924 +2221 +2336 +1966 +2001 +53 +47.2252% +50.9154% +39.6531% +40.6459% +0.7714%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17911 17933 +1743 +1653 +1908 +1878 +22 +10.7659% +10.1536% +11.9064% +11.6973% +0.1228%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 15444 15465 +1866 +1624 +1777 +1794 +21 +13.7216% +11.7333% +12.9822% +13.1227% +0.1360%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 18455 18466 +2214 +2190 +2349 +2541 +11 +13.6229% +13.4554% +14.5747% +15.9560% +0.0596%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18964 18888 +1871 +1710 +1975 +2143 -76 +10.9949% +9.9546% +11.6774% +12.7979% -0.4008%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5731 5761 +2114 +1848 +1897 +2222 +30 +57.9655% +47.2272% +49.0942% +62.7861% +0.5235%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 6080 5920 +1620 +1317 +1123 +943 -160 +37.6744% +28.6118% +23.4105% +18.9472% -2.6316%
SCP_Astral_250pg_3ms 576 22 936 741 2998 2971 +2395 +2949 +2035 +2230 -27 +415.7986% +13404.5455% +217.4145% +300.9447% -0.9006%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4906 4981 +4344 +2901 +2952 +2935 +75 +681.9466% +139.4712% +145.4904% +143.4506% +1.5287%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 8413 8366 +2121 +2020 +2350 +2239 -47 +33.9632% +31.8311% +39.0625% +36.5432% -0.5587%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8565 8593 +1871 +1864 +1581 +1570 +28 +27.8340% +27.7010% +22.5471% +22.3551% +0.3269%
SCP_Astral_500pg_3ms 982 2365 2177 5804 5989 +5007 +3624 +3812 +185 +509.8778% +153.2347% +175.1034% +3.1875%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7730 7755 +4047 +3748 +3710 +3837 +25 +109.1424% +93.5363% +91.7182% +97.9326% +0.3234%
SCP_Astral_MBR 20165 20129 20074 19793 21705 21724 +1559 +1595 +1650 +1931 +19 +7.7312% +7.9239% +8.2196% +9.7560% +0.0875%
Seer_Astral_45 225377 241455 241952 237727 239814
Seer_Astral_single 4685 4700 4632 5260 5280 +595 +580 +648 +20 +12.7001% +12.3404% +13.9896% +0.3802%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1358832
EWZ_2P_MBR_Exploris 245259 254448 255321 +10062 +873 +4.1026% +0.3431%
EWZ_2P_MBR_Exploris_Human 115447 118226 118533 +3086 +307 +2.6731% +0.2597%
EWZ_2P_MBR_Exploris_YeastHuman 128968 135402 135747 +6779 +345 +5.2563% +0.2548%
MacCoss_Eclipse_Normalization_noNorm 178174 195971 195459 +17285 -512 +9.7012% -0.2613%
MacCoss_Eclipse_Normalization_yesNorm 178174 195971 195459 +17285 -512 +9.7012% -0.2613%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6421
KEAP1KO_Eclipse 7845 8175 8155 8203 7485 7514 -331 -661 -641 -689 +29 -4.2192% -8.0856% -7.8602% -8.3994% +0.3874%
MTAC_3P_Alternating 11361 11494 11351 11338 12344 12358 +997 +864 +1007 +1020 +14 +8.7756% +7.5170% +8.8715% +8.9963% +0.1134%
MTAC_3P_Standard 11473 11560 11477 11396 12419 12425 +952 +865 +948 +1029 +6 +8.2977% +7.4827% +8.2600% +9.0295% +0.0483%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4461 4484 +356 +392 +384 +23 +8.6240% +9.5797% +9.3659% +0.5156%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4530 4534 +319 +286 +316 +320 +4 +7.5682% +6.7326% +7.4917% +7.5937% +0.0883%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4429 4445 +370 +311 +355 +348 +16 +9.0798% +7.5230% +8.6797% +8.4940% +0.3613%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4542 4540 +291 +303 +296 +309 -2 +6.8487% +7.1513% +6.9746% +7.3032% -0.0440%
Olsen_Astral_3P 13820 14378 14293 14296 14826
Olsen_Exploris_3P 7255 7582 7340 7479 8224 8240 +985 +658 +900 +761 +16 +13.5768% +8.6784% +12.2616% +10.1752% +0.1946%
SCIEX_3P 8652 9109 8679 8618 9834
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4369 4365 +1120 +976 +954 +1047 -4 +34.5146% +28.7991% +27.9683% +31.5552% -0.0916%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4333 4349 +1095 +916 +1058 +915 +16 +33.6509% +26.6822% +32.1483% +26.6453% +0.3693%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3848 3862 +1412 +1466 +1412 +1465 +14 +57.6327% +61.1853% +57.6327% +61.1181% +0.3638%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3701 3766 +1258 +1330 +1132 +1124 +65 +50.1595% +54.5977% +42.9765% +42.5435% +1.7563%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6264 6272 +693 +616 +768 +726 +8 +12.4216% +10.8911% +13.9535% +13.0905% +0.1277%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5448 5440 +719 +602 +657 +629 -8 +15.2298% +12.4432% +13.7361% +13.0742% -0.1468%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6513 6519 +908 +864 +923 +966 +6 +16.1825% +15.2785% +16.4939% +17.3960% +0.0921%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6643 6636 +790 +687 +793 +831 -7 +13.5135% +11.5482% +13.5718% +14.3152% -0.1054%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 2170 2175 +883 +751 +769 +887 +5 +68.3437% +52.7388% +54.6942% +68.8665% +0.2304%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2263 2227 +659 +567 +469 +354 -36 +42.0281% +34.1566% +26.6780% +18.9002% -1.5908%
SCP_Astral_250pg_3ms 307 8 350 283 1286 1206 +899 +1198 +856 +923 -80 +292.8339% +14975% +244.5714% +326.1484% -6.2208%
SCP_Astral_250pg_6ms 637 756 751 766 1906 1935 +1298 +1179 +1184 +1169 +29 +203.7677% +155.9524% +157.6565% +152.6110% +1.5215%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 3089 3060 +853 +785 +891 +830 -29 +38.6498% +34.5055% +41.0788% +37.2197% -0.9388%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 3130 3151 +748 +763 +674 +612 +21 +31.1278% +31.9514% +27.2103% +24.1040% +0.6709%
SCP_Astral_500pg_3ms 525 902 828 2303 2375 +1850 +1473 +1547 +72 +352.3810% +163.3038% +186.8357% +3.1264%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2901 2880 +1562 +1433 +1394 +1445 -21 +118.5129% +99.0325% +93.8089% +100.6969% -0.7239%
SCP_Astral_MBR 4708 4720 4712 4715 5293 5315 +607 +595 +603 +600 +22 +12.8929% +12.6059% +12.7971% +12.7253% +0.4156%
Seer_Astral_45 5802 6297 6122 6133 6481
Seer_Astral_single 4685 4700 4632 5260 5280 +595 +580 +648 +20 +12.7001% +12.3404% +13.9896% +0.3802%
YEAST_KO_Astral 4565 4795 4676 4673 4785
EWZ_2P_MBR_Exploris 7041 7491 7541 +500 +50 +7.1013% +0.6675%
EWZ_2P_MBR_Exploris_Human 6167 6368 6415 +248 +47 +4.0214% +0.7381%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7458 7433 +546 -25 +7.9280% -0.3352%
MacCoss_Eclipse_Normalization_noNorm 5804 6490 6488 +684 -2 +11.7850% -0.0308%
MacCoss_Eclipse_Normalization_yesNorm 5804 6490 6488 +684 -2 +11.7850% -0.0308%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 628395
KEAP1KO_Eclipse 41905 42033 +128
MTAC_3P_Alternating 67201 67072 -129
MTAC_3P_Standard 67602 67699 +97
MTAC_Yeast_Alternating_3min 12875 12913 +38
MTAC_Yeast_Alternating_5min 13146 13137 -9
MTAC_Yeast_Standard_3min 12794 12837 +43
MTAC_Yeast_Standard_5min 13241 13238 -3
Olsen_Astral_3P 242521
Olsen_Exploris_3P 161259 161588 +329
SCIEX_3P 75916
SCP_Astral_1000pg_12ms 12060 12012 -48
SCP_Astral_1000pg_24ms 11921 11946 +25
SCP_Astral_1000pg_3ms 10171 10184 +13
SCP_Astral_1000pg_6ms 6857 6906 +49
SCP_Astral_10ng_12ms 17906 17927 +21
SCP_Astral_10ng_24ms 15443 15463 +20
SCP_Astral_10ng_3ms 18432 18448 +16
SCP_Astral_10ng_6ms 18947 18864 -83
SCP_Astral_250pg_12ms 5727 5751 +24
SCP_Astral_250pg_24ms 6078 5918 -160
SCP_Astral_250pg_3ms 2997 2963 -34
SCP_Astral_250pg_6ms 4904 4980 +76
SCP_Astral_500pg_12ms 8411 8366 -45
SCP_Astral_500pg_24ms 8565 8591 +26
SCP_Astral_500pg_3ms 5797 5979 +182
SCP_Astral_500pg_6ms 7728 7753 +25
SCP_Astral_MBR 21701 21724 +23
Seer_Astral_45 239801
Seer_Astral_single 5260 5280 +20
YEAST_KO_Astral 1358820
EWZ_2P_MBR_Exploris 254414 255294 +880
EWZ_2P_MBR_Exploris_Human 118205 118505 +300
EWZ_2P_MBR_Exploris_YeastHuman 135373 135715 +342
MacCoss_Eclipse_Normalization_noNorm 195966 195454 -512
MacCoss_Eclipse_Normalization_yesNorm 195966 195454 -512

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0001
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0002 0.0006 +0.0017 +0.0008
KEAP1KO_Eclipse_Entrapment -0.0007 0.0002 -0.0001 +0.0005 -0.0003
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0006 -0.0007 -0.0002 -0.0006 +0.0003 +0.0000 -0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0008 -0.0007 +0.0006 -0.0012 -0.0002 -0.0000 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0021 -0.0024 -0.0009 -0.0005 +0.0002 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0018 -0.0014 -0.0005 -0.0004 -0.0003 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0018 -0.0021 -0.0002 -0.0007 -0.0008 -0.0000 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0012 -0.0011 -0.0001 +0.0008 +0.0013 +0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0003 -0.0000 -0.0006 +0.0003
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0012
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 -0.0000 -0.0000 +0.0002 -0.0003 +0.0011 -0.0005 +0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0003
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0026 -0.0019 +0.0004 +0.0011 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0001 -0.0018 +0.0036 +0.0015 +0.0013 +0.0028 -0.0019
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0000 -0.0002 +0.0027 +0.0045 +0.0027 +0.0036 -0.0002
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0012 -0.0023 -0.0021 -0.0012 +0.0013 +0.0003 -0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0016 -0.0016 +0.0006 +0.0001 +0.0008 +0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0008 -0.0007 +0.0014 -0.0016 +0.0008 +0.0006 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0012 -0.0007 +0.0017 +0.0019 +0.0011 +0.0010 +0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0007 -0.0008 -0.0000 -0.0009 +0.0014 +0.0004 -0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0011 0.0007 +0.0046 +0.0047 +0.0004 +0.0059 -0.0004
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0008 -0.0016 -0.0014 -0.0005 +0.0008 +0.0015 -0.0008
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0028 0.0027 +0.0096 +0.0027 -0.0000
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0004 0.0007 +0.0058 +0.0034 +0.0057 +0.0003
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0006 0.0000 +0.0022 +0.0010 +0.0028 +0.0026 +0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0001 0.0001 +0.0013 +0.0025 +0.0013 +0.0012 +0.0000
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0006 0.0017 +0.0030 +0.0040 +0.0052 +0.0024
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0019 0.0004 +0.0034 +0.0036 +0.0018 -0.0016
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 0.0005 0.0000 +0.0027 +0.0020 +0.0014 +0.0022 -0.0005
Seer_Astral_45_Entrapment -0.0023 -0.0000
Seer_Astral_single_Entrapment -0.0022 0.0018 0.0014 +0.0036 -0.0004
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0029

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0000 -0.0008 +0.0018 -0.0008
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0032 -0.0051 -0.0021 -0.0019
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0040 -0.0035 -0.0025 -0.0024 -0.0040 -0.0042 +0.0005
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0038 -0.0021 -0.0008 +0.0004 +0.0008 +0.0004 +0.0016
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0051 -0.0051 +0.0015 +0.0002 -0.0003 +0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0002 -0.0022 +0.0019 +0.0016 +0.0026 +0.0011 -0.0020
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0037 -0.0049 +0.0009 -0.0001 -0.0029 -0.0021 -0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0004 -0.0031 +0.0005 +0.0014 +0.0024 -0.0027
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0029 -0.0043 -0.0040 -0.0014
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0033
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0033 -0.0023 +0.0006 -0.0021 +0.0006 -0.0014 +0.0010
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0033
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 0.0005 -0.0030 +0.0019 +0.0012 +0.0012 -0.0035
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0058 -0.0055 +0.0015 +0.0004 +0.0015 +0.0016 +0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0045 -0.0035 +0.0024 +0.0024 +0.0037 +0.0037 +0.0010
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0052 -0.0023 -0.0006 +0.0026 +0.0020 +0.0022 +0.0029
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0069 -0.0061 -0.0006 -0.0021 -0.0007 +0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0028 -0.0026 +0.0007 -0.0003 -0.0009 +0.0019 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0029 -0.0008 +0.0029 +0.0065 +0.0058 +0.0053 +0.0021
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0046 -0.0039 +0.0015 -0.0020 +0.0014 +0.0007 +0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0000 0.0002 +0.0055 +0.0078 +0.0036 +0.0066 +0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0045 -0.0062 -0.0021 -0.0021 -0.0037 -0.0050 -0.0018
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0004 -0.0011 +0.0017 -0.0011 +0.0075 -0.0011 -0.0015
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0025 -0.0020 +0.0079 +0.0047 +0.0064 +0.0068 -0.0045
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0011 0.0032 +0.0067 +0.0071 +0.0017 +0.0052 +0.0042
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0052 -0.0042 -0.0022 -0.0041 +0.0010 +0.0020 +0.0010
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0030 0.0012 +0.0054 -0.0059 -0.0008 +0.0013 -0.0018
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0000 0.0020 +0.0065 +0.0065 +0.0028 +0.0075 +0.0020
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0030 -0.0028 +0.0031 +0.0001 -0.0003 +0.0022 +0.0002
Seer_Astral_45_Entrapment -0.0049 -0.0021
Seer_Astral_single_Entrapment -0.0074 0.0033 0.0006 +0.0080 -0.0027
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0064

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 0.0006 0.0008 +0.0021 +0.0002
KEAP1KO_Eclipse_Entrapment -0.0003 0.0002 -0.0001 +0.0001 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0003 -0.0003 -0.0001 -0.0005 -0.0001 -0.0001 +0.0000
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0003 +0.0006 -0.0005 +0.0000 -0.0000 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0012 -0.0015 -0.0005 -0.0002 -0.0001 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0009 -0.0009 -0.0005 -0.0002 +0.0001 -0.0001 -0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0013 -0.0015 -0.0007 -0.0008 -0.0007 -0.0005 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0007 -0.0007 +0.0001 +0.0003 +0.0008 +0.0000
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0004 0.0004 +0.0001 +0.0000
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0003 0.0002 +0.0006 -0.0003 +0.0008 +0.0002 -0.0002
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0002
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0020 -0.0018 -0.0003 +0.0011 +0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0005 -0.0020 +0.0025 +0.0008 +0.0011 +0.0017 -0.0016
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0000 -0.0004 +0.0016 +0.0026 +0.0022 +0.0022 -0.0004
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0006 -0.0017 -0.0019 -0.0011 +0.0010 +0.0007 -0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0009 -0.0009 +0.0008 +0.0001 +0.0007 -0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0007 -0.0010 +0.0003 -0.0014 +0.0002 -0.0002 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0009 -0.0005 +0.0014 +0.0015 +0.0010 +0.0009 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0009 -0.0009 -0.0004 -0.0011 +0.0003 -0.0001 +0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0008 0.0004 +0.0034 +0.0031 +0.0007 +0.0036 -0.0003
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0009 -0.0018 -0.0011 -0.0010 -0.0005 -0.0004 -0.0009
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0031 0.0031 +0.0090 +0.0031 -0.0000
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0015 0.0010 +0.0047 +0.0031 +0.0040 -0.0005
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0005 0.0011 +0.0029 +0.0014 +0.0031 +0.0024 +0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0008 0.0004 +0.0020 +0.0022 +0.0022 +0.0021 -0.0003
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0004 0.0025 +0.0007 +0.0029 +0.0041 +0.0021
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0015 -0.0001 +0.0025 +0.0018 +0.0009 -0.0015
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0002 -0.0004 +0.0014 +0.0011 +0.0004 +0.0009 -0.0001
Seer_Astral_45_Entrapment -0.0011 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0018 0.0014 +0.0036 -0.0004
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0012

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0005
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0017 0.0006 +0.0018 -0.0010
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0012 -0.0012 +0.0004 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0023 -0.0025 -0.0024 -0.0023 -0.0028 -0.0027 -0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0022 -0.0016 -0.0008 -0.0002 +0.0005 +0.0002 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0023 -0.0023 +0.0013 +0.0010 +0.0006 +0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 0.0003 -0.0005 +0.0032 +0.0016 +0.0019 +0.0008 -0.0009
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0014 -0.0022 +0.0015 +0.0012 -0.0009 -0.0007 -0.0008
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0007 -0.0017 +0.0006 +0.0010 +0.0020 -0.0010
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0007 -0.0017 -0.0013 -0.0010
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0019
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0015 -0.0011 +0.0015 -0.0017 +0.0006 +0.0005 +0.0004
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0011
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 0.0005 -0.0019 +0.0019 +0.0004 +0.0014 -0.0023
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0044 -0.0035 +0.0014 +0.0021 +0.0023 +0.0008 +0.0009
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0036 -0.0022 +0.0022 +0.0011 +0.0018 +0.0009 +0.0014
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0039 -0.0010 +0.0015 +0.0025 +0.0031 +0.0031 +0.0030
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0051 -0.0050 -0.0003 -0.0019 -0.0008 +0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0022 -0.0021 +0.0011 -0.0007 -0.0007 +0.0004 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0028 -0.0012 +0.0009 +0.0034 +0.0026 +0.0021 +0.0016
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0031 -0.0029 +0.0010 -0.0010 +0.0009 +0.0001 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0004 0.0017 +0.0056 +0.0058 +0.0036 +0.0047 +0.0021
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0045 -0.0045 -0.0031 -0.0013 -0.0041 -0.0044 +0.0000
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0039 0.0008 +0.0068 +0.0090 +0.0055 +0.0008 -0.0031
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0021 -0.0017 +0.0082 +0.0051 +0.0038 +0.0030 -0.0039
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0005 0.0021 +0.0061 +0.0056 +0.0028 +0.0048 +0.0016
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0023 -0.0030 -0.0011 -0.0031 +0.0013 +0.0014 -0.0007
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0025 0.0014 +0.0046 -0.0053 -0.0015 +0.0010 -0.0012
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0010 0.0010 +0.0030 +0.0032 +0.0001 +0.0038 +0.0021
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0020 -0.0013 +0.0010 +0.0004 +0.0009 +0.0015 +0.0007
Seer_Astral_45_Entrapment -0.0029 -0.0012
Seer_Astral_single_Entrapment -0.0074 0.0033 0.0016 +0.0090 -0.0017
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0014

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 8749 7310 -17085 -1439

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -39 216 -555 +255

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0295 -0.0021 +0.0295

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 820 1041 +197 +221

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -16 -22 -212 -6

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 0 1 +1 +0 +0 -1 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 14 15 +4 +1 +1 -1 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 12 +4 +0 +1 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 14 +3 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 3 3 +0 +1 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 3 3 +0 +1 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1662 0.1656 +0.0198 +0.0236 +0.0256 +0.0283 -0.0005
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1579 0.1581 +0.0188 +0.0218 +0.0229 +0.0257 +0.0001
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1608 0.1606 +0.0151 +0.0182 +0.0198 -0.0002
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1498 0.1487 -0.0044 +0.0077 +0.0111 +0.0131 -0.0011
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1733 0.1737 +0.0039 +0.0098 +0.0121 +0.0138 +0.0004
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1492 0.1497 -0.0006 +0.0131 +0.0160 +0.0174 +0.0005
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1083
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1537 0.1539 +0.0059 +0.0040 +0.0044 +0.0034 +0.0002
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1565
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5770 0.5770 -0.0099 +0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1793 0.1816 +0.0099 +0.0023

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0843 0.0845 +0.0082 +0.0106 +0.0118 +0.0125 +0.0002
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0807 0.0811 +0.0088 +0.0108 +0.0111 +0.0123 +0.0004
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0739 0.0729 +0.0056 +0.0069 +0.0071 -0.0010
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0644 0.0638 -0.0140 +0.0035 +0.0045 +0.0049 -0.0006
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0791 0.0784 -0.0008 +0.0028 +0.0031 +0.0012 -0.0006
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0641 0.0649 -0.0121 +0.0082 +0.0080 +0.0081 +0.0009
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0473
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0995 0.0998 -0.0031 -0.0022 -0.0039 -0.0029 +0.0003
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1027
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5758 0.5758 -0.0124 -0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1314 0.1344 +0.0111 +0.0030

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0042 -0.0044 -0.0020 +0.0070 +0.0012 -0.0735 +0.0002
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0154 -0.0150 -0.0076 +0.0055 -0.0002 -0.0254 -0.0004
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0067 -0.0059 +0.0007 -0.0023 -0.0001 +0.0058 -0.0008
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0717 -0.0722 +0.0012 -0.0008 +0.0020 -0.0552 +0.0005
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0709 -0.0699 -0.0054 -0.0006 -0.0003 -0.0013 -0.0010
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0555 -0.0571 -0.0080 +0.0050 -0.0016 +0.0264 +0.0016
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0501 +0.0114 +0.0329 -0.0052 -0.0460
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1785 +0.0115 +0.0151 +0.0011 -0.0506
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1829 -0.0082 +0.0282 -0.0195 +0.1631
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0366 +0.0067 +0.0305 +0.0014 -0.0057
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3249 +0.0081 +0.0093 -0.0002 -0.0180
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1255 -0.0024 -0.0402 -0.0016 +0.0920
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1270 +0.0108 -0.0145 +0.0012 +0.0539
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2182 +0.0015 +0.0038 -0.0038 -0.0096
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2386 +0.0262 -0.0191 +0.0011 +0.0363
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1260 0.1310 -0.0059 -0.0059 +0.0211 -0.1105 +0.0050
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0840 -0.0843 +0.0062 +0.0047 -0.0191 +0.0235 +0.0003
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.1862 0.1953 +0.0183 -0.0240 +0.0287 -0.0923 +0.0092
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1034 0.1037 +0.0048 -0.0054 -0.0067 +0.0152 +0.0003
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0480 -0.0480 +0.0009 +0.0001 -0.0089 +0.0024 -0.0000
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2150 0.2156 +0.0051 -0.0017 +0.0004 +0.0114 +0.0007
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1438 0.1405 -0.0032 -0.0062 -0.0160 +0.1214 -0.0033
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0804 -0.0788 +0.0043 -0.0045 -0.0054 -0.0216 -0.0016
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0424 0.0369 +0.0169 -0.0238 +0.0355 -0.0541 -0.0055
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0350 +0.0195 +0.0041 +0.0006 -0.0423
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0050 -0.0031 +0.0125 +0.0006 -0.0630
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0322 -0.0051 -0.0071 +0.0012 +0.0286
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0766 +0.0119 -0.0026 -0.0002 +0.0341
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0861 -0.0238 +0.0049 +0.0003 +0.0242
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0152 -0.0331 +0.0073 +0.0004 -0.0079
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0629 +0.0109 -0.0100 -0.0011 +0.0545
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1524 -0.0356 -0.0145 +0.0024 +0.0937
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1018 -0.0468 -0.0064 -0.0010 +0.0649

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0002 -0.0027 +0.0009 +0.0076 -0.0005 -0.0731 +0.0025
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0145 -0.0145 -0.0089 +0.0045 +0.0004 -0.0266 +0.0000
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0075 0.0071 +0.0054 -0.0044 +0.0010 +0.0039 -0.0004
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0735 -0.0736 +0.0013 +0.0005 -0.0055 -0.0472 +0.0001
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0682 -0.0667 -0.0060 -0.0005 -0.0005 -0.0019 -0.0015
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0511 -0.0520 -0.0084 +0.0078 -0.0007 +0.0201 +0.0008
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0575 +0.0142 +0.0365 -0.0057 -0.0328
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1282 +0.0050 +0.0043 -0.0072 -0.0352
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1961 -0.0338 -0.0246 +0.0154 +0.1790
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0289 +0.0064 +0.0290 +0.0021 -0.0235
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.2979 +0.0072 +0.0066 -0.0010 -0.0077
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1149 +0.0002 -0.0402 -0.0012 +0.0861
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1111 +0.0124 -0.0135 -0.0021 +0.0601
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1908 -0.0003 +0.0009 -0.0042 -0.0049
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2073 +0.0289 -0.0188 +0.0012 +0.0270
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1386 0.1487 -0.0077 -0.0028 +0.0144 -0.0825 +0.0101
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0811 -0.0761 +0.0048 +0.0016 -0.0170 +0.0254 -0.0050
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2392 0.2386 +0.0504 -0.0481 +0.0073 -0.0262 -0.0006
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.1008 0.0995 +0.0031 -0.0032 -0.0081 +0.0249 -0.0013
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0439 -0.0441 +0.0011 -0.0008 -0.0084 +0.0018 +0.0002
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2243 0.2250 +0.0036 -0.0008 +0.0016 +0.0211 +0.0006
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1301 0.1328 +0.0005 -0.0096 -0.0297 +0.1255 +0.0027
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0795 -0.0794 +0.0056 -0.0034 -0.0033 -0.0290 -0.0001
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0610 0.0549 +0.0405 -0.0089 +0.0322 -0.0562 -0.0061
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0430 +0.0258 +0.0029 -0.0003 -0.0270
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0163 -0.0049 +0.0142 +0.0054 -0.0514
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0296 -0.0001 -0.0108 +0.0000 +0.0255
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0805 +0.0137 -0.0048 +0.0001 +0.0397
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0975 -0.0232 +0.0027 +0.0012 +0.0349
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0169 -0.0350 +0.0076 +0.0002 -0.0048
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0588 +0.0131 -0.0109 +0.0003 +0.0472
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1537 -0.0435 -0.0160 +0.0023 +0.0958
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0908 -0.0508 -0.0078 +0.0009 +0.0465

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1268 0.1251 +0.0343 +0.0202 -0.0086 -0.1810 -0.0017
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1135 0.1119 +0.0169 -0.0058 +0.0004 -0.0964 -0.0016
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1151 0.1129 +0.0117 -0.0078 +0.0011 -0.1457 -0.0022
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1343 0.1352 +0.0441 -0.0007 -0.0136 -0.1637 +0.0009
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1257 0.1270 +0.0164 -0.0031 -0.0002 -0.0936 +0.0013
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1324 0.1307 +0.0170 -0.0063 +0.0017 -0.1356 -0.0016
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1719 +0.0354 +0.0384 -0.0420 -0.4037
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2114 +0.0422 -0.0321 -0.0167 -0.1386
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3086 +0.2175 -0.0279 -0.1166 -0.9326
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1383 +0.0427 +0.0074 -0.0036 -0.1181
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2260 +0.0473 +0.0030 -0.0078 -0.1096
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1731 +0.0549 +0.0262 -0.0056 -0.2071
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1325 +0.0358 +0.0129 -0.0110 -0.1990
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1890 +0.0274 +0.0045 -0.0018 -0.0963
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1838 +0.0778 +0.0001 -0.0169 -0.3545
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1956 0.1864 +0.0445 +0.0761 -0.1281 -0.3752 -0.0092
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0462 0.0452 -0.0103 +0.0134 -0.0147 -0.1050 -0.0010
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2593 0.2987 -0.0030 +0.1483 +0.0078 -0.6981 +0.0394
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1861 0.1859 +0.0037 +0.0045 +0.0051 -0.1644 -0.0002
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0420 0.0431 +0.0676 -0.0087 -0.0168 -0.1098 +0.0011
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1817 0.1829 +0.0316 +0.0062 -0.0049 -0.1536 +0.0012
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2039 0.2133 -0.0093 +0.0378 -0.0706 -0.3729 +0.0095
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0553 0.0552 +0.0977 -0.0155 +0.0159 -0.1926 -0.0000
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3918 0.4080 +0.0737 +0.1982 -0.0827 -0.8833 +0.0163
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1097 +0.0321 -0.0450 -0.0051 -0.3730
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1385 +0.0200 -0.0293 -0.0344 -0.4034
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0763 +0.0068 -0.0387 -0.0080 -0.0304
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0899 +0.0190 -0.0584 -0.0028 -0.0621
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0990 +0.0281 -0.0478 -0.0031 -0.0954
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0895 +0.0273 -0.0601 -0.0037 -0.0445
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0891 +0.0130 -0.0614 -0.0008 -0.0959
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1457 +0.0619 -0.0455 -0.0143 -0.4283
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1080 +0.0688 -0.0494 -0.0103 -0.3892

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0539 0.0541 +0.0149 -0.0182 -0.0054 -0.0669 +0.0003
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0348 0.0355 +0.0035 +0.0005 +0.0043 -0.0467 +0.0007
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0465 0.0464 -0.0157 -0.0104 +0.0083 -0.0658 -0.0000
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0422 0.0415 -0.0042 +0.0002 -0.0084 -0.0774 -0.0007
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0382 0.0372 +0.0032 -0.0030 +0.0035 -0.0334 -0.0010
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0571 0.0531 +0.0000 +0.0073 -0.0081 -0.0683 -0.0040
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0571 +0.0402 -0.0136 +0.0467 -0.2086
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0760 +0.0316 -0.0208 -0.0112 -0.0326
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1708 +0.1306 -0.0136 -0.0647 -0.2220
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0217 +0.0032 +0.0034 -0.0021 -0.0248
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0471 +0.0110 -0.0047 +0.0013 -0.0154
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0238 +0.0055 -0.0000 +0.0038 -0.0382
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0260 +0.0026 +0.0079 -0.0036 -0.0372
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0436 +0.0015 +0.0006 +0.0010 -0.0078
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0352 +0.0296 -0.0022 -0.0025 -0.0856
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0602 0.0487 +0.0146 +0.0452 -0.0355 -0.1675 -0.0115
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0237 0.0197 -0.0057 -0.0062 -0.0031 -0.0249 -0.0040
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0686 0.1224 -0.1294 +0.1626 +0.0090 -0.4319 +0.0538
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0356 0.0349 -0.0046 +0.0074 +0.0016 -0.0335 -0.0007
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0101 0.0098 +0.0109 -0.0066 +0.0090 -0.0332 -0.0003
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0361 0.0363 -0.0053 +0.0093 +0.0025 -0.0462 +0.0002
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0647 0.0857 -0.0166 +0.0170 -0.0166 -0.1527 +0.0210
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0189 0.0211 +0.0068 -0.0006 -0.0039 -0.0548 +0.0022
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.0908 0.0874 -0.0891 -0.0032 -0.0082 -0.3396 -0.0034
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0427 +0.0682 -0.0593 -0.0056 -0.1796
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0617 +0.0668 -0.0849 -0.0031 -0.1818
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0297 +0.0113 -0.0357 +0.0198 -0.0231
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0251 -0.0054 -0.0154 +0.0040 -0.0237
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0261 -0.0011 -0.0225 +0.0112 -0.0347
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0235 +0.0094 -0.0181 -0.0013 -0.0222
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0347 -0.0134 -0.0199 -0.0090 -0.0328
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0504 +0.0271 -0.0671 +0.0055 -0.2089
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0404 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 230.7000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 11.3900 11.2300 -12.8400 -6.0900 -8.6400 -5.9000 -0.1600 -53.3444% -35.1617% -43.4826% -34.4425% -1.4047%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 9.3000 10.7100 -2.0400 +1.6400 +2.3500 +1.4200 +1.4100 -16.0000% +18.0816% +28.1100% +15.2853% +15.1613%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 10.3600 9.2400 -3.0700 +0.2800 -0.4200 -1.5700 -1.1200 -24.9391% +3.1250% -4.3478% -14.5236% -10.8108%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 5.3800 5.1100 +0.8800 +0.7000 +0.1700 -0.2700 +20.8038% +15.8730% +3.4413% -5.0186%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.9100 5.4000 +0.0200 +1.0200 +0.6500 +0.8600 +0.4900 +0.3717% +23.2877% +13.6842% +18.9427% +9.9796%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 5.4000 5.2600 -0.1700 +1.1200 +0.8200 +0.6000 -0.1400 -3.1308% +27.0531% +18.4685% +12.8755% -2.5926%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9400 5.2700 -0.2800 +0.8500 +0.7400 +0.8100 +0.3300 -5.0450% +19.2308% +16.3355% +18.1614% +6.6802%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 41.7700
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 15.0200 15.8300 -11.8300 -3.9300 -2.4900 -3.4500 +0.8100 -42.7693% -19.8887% -13.5917% -17.8942% +5.3928%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 16.9500
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.3000 5.2200 -0.5700 +0.6300 +0.5700 +1.1300 -0.0800 -9.8446% +13.7255% +12.2581% +27.6284% -1.5094%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5 5.4200 -0.8400 +1.0200 -0.4600 +0.4200 -13.4185% +23.1818% -7.8231% +8.4000%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 5.4000 5.7400 +1.2200 +2.0100 +0.9400 +2.1000 +0.3400 +26.9912% +53.8874% +19.5833% +57.6923% +6.2963%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.1900 4.6300 -1.1100 +1.1200 +0.7100 +1.1900 +0.4400 -19.3380% +31.9088% +18.1122% +34.5930% +10.5012%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.8100 6.8300 -0.2400 +1.3000 +1.3200 +1.0900 +1.0200 -3.3946% +23.5081% +23.9564% +18.9895% +17.5559%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 6.3800 5.7700 -1.8200 +0.0400 -0.3700 +0.2300 -0.6100 -23.9789% +0.6981% -6.0261% +4.1516% -9.5611%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.1100 5.3900 -1.0600 +0.7200 +1.0900 +0.9800 +0.2800 -16.4341% +15.4176% +25.3488% +22.2222% +5.4795%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 6.2300 6.7800 -0.6000 +1.8500 +2.1500 +1.1600 +0.5500 -8.1301% +37.5254% +46.4363% +20.6406% +8.8283%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.6100 4.8600 +0.1200 +1.2000 +1.4700 +0.2500 +2.5316% +32.7869% +43.3628% +5.4230%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.8600 5.3700 +0.1100 +1.5300 +1.6100 +0.5100 +2.0913% +39.8438% +42.8191% +10.4938%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 4.1100 4.4800 -0.1700 +1.0500 +0.7700 +1.0300 +0.3700 -3.6559% +30.6122% +20.7547% +29.8551% +9.0024%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.8900 5.1700 +1 +1.8800 +1.4800 +1.9000 +0.2800 +23.9808% +57.1429% +40.1084% +58.1040% +5.7260%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 5.3400 5 -0.2800 +1.4700 +1.4000 +1.5100 -0.3400 -5.3030% +41.6431% +38.8889% +43.2665% -6.3670%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 5.1800 5.1300 -0.3800 +1.3100 +0.9800 +0.3200 -0.0500 -6.8966% +34.2932% +23.6145% +6.6528% -0.9653%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5.0400 5 +0.2700 +1.5400 +1.4300 -0.0400 +5.7082% +44.5087% +40.0560% -0.7937%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.8700 4.8700 +0.2200 +1.2500 +1.1400 +1.0900 +0 +4.7312% +34.5304% +30.5630% +28.8360% +0%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5800 7.8100 -1.2300 +1.2600 +1.7100 +0.2300 -13.6062% +19.2366% +28.0328% +3.0343%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 68.7900
Seer_Astral_single 4.4700 4.1400 5.5800 5.9800 5.1600 +0.6900 +1.0200 -0.4200 -0.8200 +15.4362% +24.6377% -7.5269% -13.7124%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 155.4000
EWZ_2P_MBR_Exploris 26.1800 24.2100 22.2400 -3.9400 -1.9700 -15.0497% -8.1371%
EWZ_2P_MBR_Exploris_Human 12.9100 12.3500 13.5600 +0.6500 +1.2100 +5.0349% +9.7976%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 13.9300 13.9900 +1.9300 +0.0600 +16.0033% +0.4307%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.6100 31.3400 +3.8300 +2.7300 +13.9222% +9.5421%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.4500 31.7100 +4.0400 +3.2600 +14.6007% +11.4587%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5117_DIA_H292_Rep1_EWZ_ES.png
MA5117_DIA_H292_Rep1_EWZ_ES.png
MA5118_DIA_H292_Rep2_EWZ_ES.png
MA5118_DIA_H292_Rep2_EWZ_ES.png
MA5119_DIA_H292_Rep3_EWZ_ES.png
MA5119_DIA_H292_Rep3_EWZ_ES.png
MA5120_DIA_H292_KEAP1KO_Rep1_EWZ_ES.png
MA5120_DIA_H292_KEAP1KO_Rep1_EWZ_ES.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png