Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6780461
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1284406 1292235 +195741 -14770 -19720 -1306 +7829 +17.8515% -1.1301% -1.5031% -0.1010% +0.6095%
MTAC_3P_Alternating 586322 615762 610710 599881 617552 621395 +35073 +5633 +10685 +21514 +3843 +5.9819% +0.9148% +1.7496% +3.5864% +0.6223%
MTAC_3P_Standard 596590 623022 617574 607435 624112 625424 +28834 +2402 +7850 +17989 +1312 +4.8331% +0.3855% +1.2711% +2.9615% +0.2102%
MTAC_Yeast_Alternating_3min 137548 136839 135560 143527 145706 +8158 +8867 +10146 +2179 +5.9310% +6.4799% +7.4845% +1.5182%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 162146 164379 +8738 +7828 +7870 +9344 +2233 +5.6142% +5.0003% +5.0285% +6.0270% +1.3772%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 144902 148110 +9601 +8725 +8818 +10225 +3208 +6.9317% +6.2596% +6.3306% +7.4156% +2.2139%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 163364 165591 +6629 +6859 +6431 +7669 +2227 +4.1702% +4.3211% +4.0406% +4.8562% +1.3632%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3430707
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1315141 1319303 +296567 +164634 +195430 +135219 +4162 +28.9974% +14.2581% +17.3890% +11.4197% +0.3165%
SCIEX_3P 672242 749525 722698 714454 737429
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 50408 53263 +12381 +11563 +10838 +11163 +2855 +30.2847% +27.7290% +25.5463% +26.5154% +5.6638%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 48770 51247 +10178 +8845 +9224 +10095 +2477 +24.7827% +20.8599% +21.9499% +24.5310% +5.0789%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 39091 42044 +33304 +18929 +19029 +19131 +2953 +381.0526% +81.8905% +82.6809% +83.4941% +7.5542%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 27013 28680 +11745 +11127 +10271 +10332 +1667 +69.3534% +63.3909% +55.7934% +56.3113% +6.1711%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 111950 114502 +14594 +11611 +15519 +15854 +2552 +14.6074% +11.2848% +15.6784% +16.0713% +2.2796%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 82425 85070 +13972 +12342 +13625 +13944 +2645 +19.6517% +16.9701% +19.0706% +19.6046% +3.2090%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 118105 123935 +18231 +17438 +18313 +19501 +5830 +17.2472% +16.3742% +17.3382% +18.6730% +4.9363%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 124016 128906 +13749 +11590 +14584 +15825 +4890 +11.9394% +9.8793% +12.7569% +13.9944% +3.9430%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 17755 18714 +8520 +7908 +7476 +7481 +959 +83.5786% +73.1816% +66.5243% +66.5984% +5.4013%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 19443 20673 +5866 +5240 +4632 +4974 +1230 +39.6164% +33.9532% +28.8760% +31.6835% +6.3262%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 7838 8726 +7465 +6694 +6276 +6340 +888 +591.9905% +329.4291% +256.1633% +265.7167% +11.3294%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 13463 16166 +14730 +11383 +10476 +10435 +2703 +1025.7660% +237.9887% +184.1125% +182.0799% +20.0772%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 30138 32026 +10316 +10131 +9446 +9563 +1888 +47.5173% +46.2708% +41.8335% +42.5722% +6.2645%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 29951 32256 +6396 +6113 +5996 +6631 +2305 +24.7332% +23.3829% +22.8332% +25.8771% +7.6959%
SCP_Astral_500pg_3ms 3484 6898 6834 17468 19322 +15838 +12424 +12488 +1854 +454.5924% +180.1102% +182.7334% +10.6137%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 25826 28202 +17503 +16728 +15320 +15313 +2376 +163.5947% +145.7905% +118.9256% +118.8067% +9.2000%
SCP_Astral_MBR 92167 93585 91884 90864 105889 108777 +16610 +15192 +16893 +17913 +2888 +18.0216% +16.2334% +18.3851% +19.7141% +2.7274%
Seer_Astral_45 2512737 3124006 3135497 2971207 3002843
Seer_Astral_single 56699 55793 55891 58025 60660 +3961 +4867 +4769 +2635 +6.9860% +8.7233% +8.5327% +4.5411%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17320764
EWZ_2P_MBR_Exploris 1776128 1855012 1865977 +89849 +10965 +5.0587% +0.5911%
EWZ_2P_MBR_Exploris_Human 836809 876894 881569 +44760 +4675 +5.3489% +0.5331%
EWZ_2P_MBR_Exploris_YeastHuman 914924 975923 977795 +62871 +1872 +6.8717% +0.1918%
MacCoss_Eclipse_Normalization_noNorm 2078034 2237537 2247711 +169677 +10174 +8.1653% +0.4547%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2237537 2247711 +169677 +10174 +8.1653% +0.4547%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 113299
KEAP1KO_Eclipse 111504 133619 131359 132031 145905 148329 +36825 +14710 +16970 +16298 +2424 +33.0257% +11.0089% +12.9188% +12.3441% +1.6614%
MTAC_3P_Alternating 108267 117352 114659 114816 121363 123799 +15532 +6447 +9140 +8983 +2436 +14.3460% +5.4937% +7.9715% +7.8238% +2.0072%
MTAC_3P_Standard 110265 118693 115800 116148 122895 124703 +14438 +6010 +8903 +8555 +1808 +13.0939% +5.0635% +7.6883% +7.3656% +1.4712%
MTAC_Yeast_Alternating_3min 48858 49032 48995 53863 55378 +6520 +6346 +6383 +1515 +13.3448% +12.9426% +13.0279% +2.8127%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 60319 61497 +7528 +6422 +5657 +5613 +1178 +13.9487% +11.6605% +10.1307% +10.0440% +1.9530%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 55005 56180 +7559 +6515 +5891 +5720 +1175 +15.5468% +13.1179% +11.7143% +11.3357% +2.1362%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 60460 62196 +7136 +6277 +5489 +5369 +1736 +12.9604% +11.2252% +9.6796% +9.4480% +2.8713%
Olsen_Astral_3P 198770 231103 234505 234149 237050
Olsen_Exploris_3P 51272 58784 55047 58593 70903 72007 +20735 +13223 +16960 +13414 +1104 +40.4412% +22.4942% +30.8100% +22.8935% +1.5571%
SCIEX_3P 82206 93920 87927 87858 99825
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 19045 20401 +5961 +5443 +5152 +4694 +1356 +41.2812% +36.3886% +33.7858% +29.8848% +7.1200%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 18005 19303 +4820 +4238 +4387 +4233 +1298 +33.2804% +28.1314% +29.4114% +28.0889% +7.2091%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 15749 17210 +8470 +7834 +7821 +7846 +1461 +96.9108% +83.5538% +83.2996% +83.7890% +9.2768%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 15297 16380 +7482 +7121 +6596 +6570 +1083 +84.0863% +76.9090% +67.4162% +66.9725% +7.0798%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 40288 41662 +6797 +5365 +7320 +7237 +1374 +19.4952% +14.7808% +21.3150% +21.0225% +3.4104%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 29919 31075 +6426 +5609 +5956 +5852 +1156 +26.0700% +22.0254% +23.7111% +23.2010% +3.8638%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 43088 45956 +9268 +8280 +8307 +8535 +2868 +25.2617% +21.9769% +22.0643% +22.8080% +6.6561%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 44504 46670 +6514 +5125 +6627 +6777 +2166 +16.2217% +12.3360% +16.5497% +16.9879% +4.8670%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7199 7634 +3968 +3685 +3425 +3388 +435 +108.2379% +93.3148% +81.3732% +79.7927% +6.0425%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 7756 8261 +2962 +2650 +2406 +2195 +505 +55.8973% +47.2287% +41.0931% +36.1853% +6.5111%
SCP_Astral_250pg_3ms 675 721 908 879 3595 4172 +3497 +3451 +3264 +3293 +577 +518.0741% +478.6408% +359.4714% +374.6303% +16.0501%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 5562 6891 +5455 +5153 +4746 +4728 +1329 +379.8747% +296.4902% +221.2587% +218.5853% +23.8943%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 11774 12669 +4875 +4697 +4417 +4263 +895 +62.5481% +58.9187% +53.5264% +50.7138% +7.6015%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 11262 12395 +3237 +3053 +3024 +2981 +1133 +35.3461% +32.6804% +32.2698% +31.6656% +10.0604%
SCP_Astral_500pg_3ms 1846 2600 2586 7448 8323 +6477 +5723 +5737 +875 +350.8667% +220.1154% +221.8484% +11.7481%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 10188 11257 +7383 +7102 +6483 +6452 +1069 +190.5782% +170.9266% +135.7981% +134.2768% +10.4927%
SCP_Astral_MBR 24110 24991 24570 24544 28870 30152 +6042 +5161 +5582 +5608 +1282 +25.0601% +20.6514% +22.7188% +22.8488% +4.4406%
Seer_Astral_45 69584 90103 87204 87620 88560
Seer_Astral_single 56699 55793 55891 58025 60660 +3961 +4867 +4769 +2635 +6.9860% +8.7233% +8.5327% +4.5411%
YEAST_KO_Astral 66823 87888 87428 86498 84463
EWZ_2P_MBR_Exploris 55271 59611 61651 +6380 +2040 +11.5431% +3.4222%
EWZ_2P_MBR_Exploris_Human 48465 52005 53608 +5143 +1603 +10.6118% +3.0824%
EWZ_2P_MBR_Exploris_YeastHuman 51246 55877 57183 +5937 +1306 +11.5853% +2.3373%
MacCoss_Eclipse_Normalization_noNorm 73278 78120 79190 +5912 +1070 +8.0679% +1.3697%
MacCoss_Eclipse_Normalization_yesNorm 73278 78120 79190 +5912 +1070 +8.0679% +1.3697%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 630477
KEAP1KO_Eclipse 87920 92888 93982 93441 89619 90649 +2729 -2239 -3333 -2792 +1030 +3.1040% -2.4104% -3.5464% -2.9880% +1.1493%
MTAC_3P_Alternating 63773 63974 63611 63015 65078 65375 +1602 +1401 +1764 +2360 +297 +2.5120% +2.1900% +2.7731% +3.7451% +0.4564%
MTAC_3P_Standard 64317 64464 64219 63385 65667 65743 +1426 +1279 +1524 +2358 +76 +2.2171% +1.9841% +2.3731% +3.7201% +0.1157%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12564 12589 +522 +619 +649 +25 +4.3258% +5.1713% +5.4355% +0.1990%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12801 12877 +445 +406 +515 +549 +76 +3.5795% +3.2556% +4.1660% +4.4533% +0.5937%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12487 12568 +560 +521 +608 +600 +81 +4.6636% +4.3247% +5.0836% +5.0134% +0.6487%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12856 12961 +400 +496 +484 +551 +105 +3.1845% +3.9791% +3.8791% +4.4400% +0.8167%
Olsen_Astral_3P 236395 245756 242430 240719 237342
Olsen_Exploris_3P 146224 153534 153990 155827 155394 156821 +10597 +3287 +2831 +994 +1427 +7.2471% +2.1409% +1.8384% +0.6379% +0.9183%
SCIEX_3P 70810 74366 72157 71550 73172
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10883 11410 +2247 +1882 +1825 +2076 +527 +24.5225% +19.7523% +19.0402% +22.2413% +4.8424%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 10595 11205 +1907 +1444 +1793 +1652 +610 +20.5098% +14.7936% +19.0501% +17.2930% +5.7574%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 8821 9023 +6573 +2939 +2776 +2907 +202 +268.2857% +48.3070% +44.4373% +47.5311% +2.2900%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6131 6458 +1755 +1870 +1500 +1535 +327 +37.3166% +40.7585% +30.2541% +31.1802% +5.3336%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16853 17253 +1063 +973 +1228 +1198 +400 +6.5658% +5.9767% +7.6630% +7.4618% +2.3735%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14483 14759 +1160 +918 +1071 +1088 +276 +8.5300% +6.6325% +7.8244% +7.9585% +1.9057%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16887 17489 +1237 +1213 +1372 +1564 +602 +7.6114% +7.4527% +8.5128% +9.8210% +3.5649%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17617 18141 +1124 +963 +1228 +1396 +524 +6.6052% +5.6060% +7.2607% +8.3368% +2.9744%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 4941 5202 +1555 +1289 +1338 +1663 +261 +42.6378% +32.9415% +34.6273% +46.9907% +5.2823%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5427 5561 +1261 +958 +764 +584 +134 +29.3256% +20.8125% +15.9266% +11.7340% +2.4691%
SCP_Astral_250pg_3ms 576 22 936 741 2680 2775 +2199 +2753 +1839 +2034 +95 +381.7708% +12513.6364% +196.4744% +274.4939% +3.5448%
SCP_Astral_250pg_6ms 637 2080 2029 2046 3771 4489 +3852 +2409 +2460 +2443 +718 +604.7096% +115.8173% +121.2420% +119.4037% +19.0400%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7435 7731 +1486 +1385 +1715 +1604 +296 +23.7950% +21.8248% +28.5073% +26.1792% +3.9812%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7593 8125 +1403 +1396 +1113 +1102 +532 +20.8718% +20.7460% +15.8728% +15.6913% +7.0065%
SCP_Astral_500pg_3ms 982 2365 2177 4719 5275 +4293 +2910 +3098 +556 +437.1690% +123.0444% +142.3059% +11.7822%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 6659 7102 +3394 +3095 +3057 +3184 +443 +91.5318% +77.2398% +75.5748% +81.2660% +6.6527%
SCP_Astral_MBR 20165 20129 20074 19793 20378 20566 +401 +437 +492 +773 +188 +1.9886% +2.1710% +2.4509% +3.9054% +0.9226%
Seer_Astral_45 225377 241455 241952 237727 233526
Seer_Astral_single 4685 4700 4632 4849 5060 +375 +360 +428 +211 +8.0043% +7.6596% +9.2401% +4.3514%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1339502
EWZ_2P_MBR_Exploris 245259 244802 247748 +2489 +2946 +1.0148% +1.2034%
EWZ_2P_MBR_Exploris_Human 115447 114079 115558 +111 +1479 +0.0961% +1.2965%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130613 131740 +2772 +1127 +2.1494% +0.8629%
MacCoss_Eclipse_Normalization_noNorm 178174 187043 187459 +9285 +416 +5.2112% +0.2224%
MacCoss_Eclipse_Normalization_yesNorm 178174 187043 187459 +9285 +416 +5.2112% +0.2224%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6583
KEAP1KO_Eclipse 7845 8175 8155 8203 8224 8439 +594 +264 +284 +236 +215 +7.5717% +3.2294% +3.4825% +2.8770% +2.6143%
MTAC_3P_Alternating 11361 11494 11351 11338 11831 12050 +689 +556 +699 +712 +219 +6.0646% +4.8373% +6.1580% +6.2798% +1.8511%
MTAC_3P_Standard 11473 11560 11477 11396 12025 12069 +596 +509 +592 +673 +44 +5.1948% +4.4031% +5.1581% +5.9056% +0.3659%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4354 4390 +262 +298 +290 +36 +6.3469% +7.2825% +7.0732% +0.8268%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4404 4457 +242 +209 +239 +243 +53 +5.7414% +4.9200% +5.6662% +5.7665% +1.2035%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4321 4358 +283 +224 +268 +261 +37 +6.9448% +5.4185% +6.5526% +6.3705% +0.8563%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4397 4452 +203 +215 +208 +221 +55 +4.7776% +5.0743% +4.9010% +5.2234% +1.2509%
Olsen_Astral_3P 13820 14378 14293 14296 14381
Olsen_Exploris_3P 7255 7582 7340 7479 7744 7941 +686 +359 +601 +462 +197 +9.4555% +4.7349% +8.1880% +6.1773% +2.5439%
SCIEX_3P 8652 9109 8679 8618 9355
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3916 4115 +870 +726 +704 +797 +199 +26.8105% +21.4222% +20.6391% +24.0205% +5.0817%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3764 4006 +752 +573 +715 +572 +242 +23.1100% +16.6909% +21.7259% +16.6570% +6.4293%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3262 3337 +887 +941 +887 +940 +75 +36.2041% +39.2738% +36.2041% +39.2157% +2.2992%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3259 3456 +948 +1020 +822 +814 +197 +37.7990% +41.8719% +31.2073% +30.8100% +6.0448%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5846 6011 +432 +355 +507 +465 +165 +7.7433% +6.2765% +9.2115% +8.3844% +2.8224%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5069 5220 +499 +382 +437 +409 +151 +10.5698% +7.8958% +9.1365% +8.5014% +2.9789%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5893 6134 +523 +479 +538 +581 +241 +9.3210% +8.4704% +9.6140% +10.4628% +4.0896%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6105 6326 +480 +377 +483 +521 +221 +8.2107% +6.3372% +8.2663% +8.9750% +3.6200%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1855 1985 +693 +561 +579 +697 +130 +53.6378% +39.3961% +41.1807% +54.1149% +7.0081%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1982 2003 +435 +343 +245 +130 +21 +27.7423% +20.6627% +13.9363% +6.9407% +1.0595%
SCP_Astral_250pg_3ms 307 8 350 283 1112 1162 +855 +1154 +812 +879 +50 +278.5016% +14425% +232.0000% +310.6007% +4.4964%
SCP_Astral_250pg_6ms 637 756 751 766 1449 1745 +1108 +989 +994 +979 +296 +173.9403% +130.8201% +132.3569% +127.8068% +20.4279%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2723 2853 +646 +578 +684 +623 +130 +29.2705% +25.4066% +31.5353% +27.9372% +4.7741%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2749 2975 +572 +587 +498 +436 +226 +23.8036% +24.5812% +20.1050% +17.1721% +8.2212%
SCP_Astral_500pg_3ms 525 902 828 1832 2072 +1547 +1170 +1244 +240 +294.6667% +129.7118% +150.2415% +13.1004%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2446 2624 +1306 +1177 +1138 +1189 +178 +99.0895% +81.3407% +76.5814% +82.8571% +7.2772%
SCP_Astral_MBR 4708 4720 4712 4715 4934 5024 +316 +304 +312 +309 +90 +6.7120% +6.4407% +6.6214% +6.5536% +1.8241%
Seer_Astral_45 5802 6297 6122 6133 6123
Seer_Astral_single 4685 4700 4632 4849 5060 +375 +360 +428 +211 +8.0043% +7.6596% +9.2401% +4.3514%
YEAST_KO_Astral 4565 4795 4676 4673 4730
EWZ_2P_MBR_Exploris 7041 7029 7234 +193 +205 +2.7411% +2.9165%
EWZ_2P_MBR_Exploris_Human 6167 6076 6252 +85 +176 +1.3783% +2.8966%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6956 7138 +251 +182 +3.6445% +2.6164%
MacCoss_Eclipse_Normalization_noNorm 5804 6128 6247 +443 +119 +7.6327% +1.9419%
MacCoss_Eclipse_Normalization_yesNorm 5804 6128 6247 +443 +119 +7.6327% +1.9419%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 630467
KEAP1KO_Eclipse 89599 90611 +1012
MTAC_3P_Alternating 65077 65364 +287
MTAC_3P_Standard 65657 65728 +71
MTAC_Yeast_Alternating_3min 12558 12579 +21
MTAC_Yeast_Alternating_5min 12789 12857 +68
MTAC_Yeast_Standard_3min 12476 12560 +84
MTAC_Yeast_Standard_5min 12851 12943 +92
Olsen_Astral_3P 237315
Olsen_Exploris_3P 155392 156819 +1427
SCIEX_3P 73165
SCP_Astral_1000pg_12ms 10883 11409 +526
SCP_Astral_1000pg_24ms 10595 11204 +609
SCP_Astral_1000pg_3ms 8821 9020 +199
SCP_Astral_1000pg_6ms 6125 6450 +325
SCP_Astral_10ng_12ms 16852 17249 +397
SCP_Astral_10ng_24ms 14483 14758 +275
SCP_Astral_10ng_3ms 16884 17484 +600
SCP_Astral_10ng_6ms 17617 18141 +524
SCP_Astral_250pg_12ms 4939 5202 +263
SCP_Astral_250pg_24ms 5427 5557 +130
SCP_Astral_250pg_3ms 2680 2770 +90
SCP_Astral_250pg_6ms 3771 4489 +718
SCP_Astral_500pg_12ms 7435 7729 +294
SCP_Astral_500pg_24ms 7593 8124 +531
SCP_Astral_500pg_3ms 4719 5272 +553
SCP_Astral_500pg_6ms 6659 7098 +439
SCP_Astral_MBR 20378 20564 +186
Seer_Astral_45 233525
Seer_Astral_single 4849 5060 +211
YEAST_KO_Astral 1339497
EWZ_2P_MBR_Exploris 244790 247728 +2938
EWZ_2P_MBR_Exploris_Human 114069 115546 +1477
EWZ_2P_MBR_Exploris_YeastHuman 130608 131734 +1126
MacCoss_Eclipse_Normalization_noNorm 187042 187457 +415
MacCoss_Eclipse_Normalization_yesNorm 187042 187457 +415

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0015 -0.0006 +0.0005 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0008 -0.0007 -0.0000 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0013 -0.0012 -0.0007 -0.0011 -0.0002 -0.0004 +0.0002
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0016 -0.0015 -0.0002 -0.0020 -0.0010 -0.0008 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0019 -0.0013 +0.0002 +0.0006 +0.0013 +0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0010 -0.0012 -0.0008 +0.0001 +0.0002 +0.0003 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0021 -0.0002 -0.0008 -0.0009 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0011 -0.0006 +0.0005 +0.0014 +0.0019 +0.0005
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0008 -0.0001 -0.0007 +0.0007
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0004 0.0010 +0.0012 +0.0008 +0.0021 +0.0006 +0.0006
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0031 -0.0021 +0.0002 +0.0009 +0.0011
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0000 0.0019 +0.0073 +0.0052 +0.0051 +0.0065 +0.0019
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 0.0017 -0.0005 +0.0025 +0.0042 +0.0024 +0.0033 -0.0022
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0021 -0.0002 +0.0000 +0.0009 +0.0034 +0.0024 +0.0019
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0016 -0.0010 +0.0012 +0.0006 +0.0014 +0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0019 0.0003 +0.0024 -0.0006 +0.0018 +0.0016 +0.0022
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0010 -0.0002 +0.0022 +0.0024 +0.0016 +0.0016 +0.0008
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0011 0.0005 +0.0013 +0.0004 +0.0026 +0.0017 +0.0016
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0015 0.0035 +0.0074 +0.0076 +0.0033 +0.0088 +0.0020
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0021 -0.0000 +0.0002 +0.0012 +0.0024 +0.0031 +0.0021
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 -0.0011 0.0040 +0.0109 +0.0040 +0.0051
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0019 0.0012 +0.0063 +0.0039 +0.0062 +0.0031
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0032 0.0001 +0.0023 +0.0011 +0.0028 +0.0027 +0.0033
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0017 0.0015 +0.0027 +0.0039 +0.0027 +0.0026 -0.0002
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0011 0.0030 +0.0043 +0.0053 +0.0065 +0.0019
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0004 0.0024 +0.0055 +0.0057 +0.0039 +0.0020
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 -0.0009 +0.0018 +0.0011 +0.0006 +0.0013 +0.0001
Seer_Astral_45_Entrapment -0.0023 -0.0008
Seer_Astral_single_Entrapment -0.0022 -0.0001 0.0002 +0.0024 +0.0002
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0024
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0015 0.0004 +0.0030 +0.0019
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0046 -0.0026 +0.0003 +0.0020
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0037 -0.0041 -0.0031 -0.0030 -0.0047 -0.0049 -0.0004
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0044 -0.0031 -0.0019 -0.0006 -0.0002 -0.0006 +0.0013
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0028 +0.0037 +0.0024 +0.0020 +0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 0.0007 -0.0009 +0.0032 +0.0029 +0.0039 +0.0025 -0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0052 -0.0033 +0.0025 +0.0015 -0.0013 -0.0005 +0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0009 -0.0041 -0.0005 +0.0004 +0.0015 -0.0032
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0042 -0.0043 -0.0040 -0.0001
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0031
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0005 +0.0024 -0.0003 +0.0023 +0.0004 +0.0012
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0041
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0032 -0.0022 +0.0027 +0.0019 +0.0020 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 0.0033 -0.0060 +0.0010 -0.0002 +0.0010 +0.0010 -0.0093
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0004 0.0016 +0.0075 +0.0075 +0.0088 +0.0088 +0.0012
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0025 -0.0007 +0.0011 +0.0043 +0.0036 +0.0038 +0.0018
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0066 -0.0065 -0.0010 -0.0025 -0.0011 +0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0032 -0.0035 -0.0003 -0.0012 -0.0019 +0.0010 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0021 -0.0006 +0.0030 +0.0067 +0.0060 +0.0054 +0.0014
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0036 +0.0018 -0.0017 +0.0017 +0.0010 -0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0041 0.0011 +0.0064 +0.0087 +0.0045 +0.0075 -0.0030
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0024 0.0011 +0.0052 +0.0053 +0.0037 +0.0024 +0.0035
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0053 0.0117 +0.0145 +0.0117 +0.0203 +0.0117 +0.0064
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0000 0.0046 +0.0145 +0.0113 +0.0131 +0.0134 +0.0046
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0017 0.0032 +0.0068 +0.0072 +0.0018 +0.0053 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0013 -0.0000 +0.0020 +0.0001 +0.0051 +0.0062 +0.0013
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0031 0.0024 +0.0066 -0.0046 +0.0004 +0.0025 -0.0007
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0000 0.0018 +0.0063 +0.0063 +0.0026 +0.0074 +0.0018
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0028 -0.0002 +0.0057 +0.0028 +0.0023 +0.0048 +0.0026
Seer_Astral_45_Entrapment -0.0049 -0.0047
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0020 +0.0094 +0.0020
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0004
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0009 -0.0003 +0.0009 +0.0006
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0006 -0.0005 -0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0007 -0.0005 -0.0004 -0.0008 -0.0003 -0.0004 +0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0007 +0.0002 -0.0009 -0.0003 -0.0004 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0013 -0.0009 +0.0000 +0.0003 +0.0005 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0007 -0.0003 +0.0000 +0.0002 +0.0001 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0014 -0.0015 -0.0007 -0.0008 -0.0007 -0.0005 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0009 -0.0004 +0.0005 +0.0006 +0.0011 +0.0005
MacCoss_Eclipse_Normalization_Entrapment 0.0002 -0.0001 0.0002 -0.0000 +0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0006
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0003 0.0010 +0.0014 +0.0005 +0.0016 +0.0010 +0.0007
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0022 -0.0012 +0.0003 +0.0017 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0003 0.0007 +0.0053 +0.0035 +0.0038 +0.0044 +0.0010
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 0.0017 -0.0006 +0.0014 +0.0023 +0.0020 +0.0020 -0.0023
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0013 0.0001 -0.0001 +0.0007 +0.0029 +0.0025 +0.0014
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0012 -0.0008 +0.0008 +0.0002 +0.0008 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0013 0.0002 +0.0015 -0.0002 +0.0014 +0.0010 +0.0015
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0008 -0.0002 +0.0017 +0.0018 +0.0013 +0.0012 +0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0012 -0.0000 +0.0005 -0.0002 +0.0012 +0.0008 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0020 0.0021 +0.0051 +0.0048 +0.0024 +0.0053 +0.0001
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0012 -0.0006 +0.0001 +0.0002 +0.0007 +0.0007 +0.0006
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0006 0.0036 +0.0096 +0.0036 +0.0030
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0000 0.0020 +0.0057 +0.0042 +0.0050 +0.0021
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0010 0.0004 +0.0022 +0.0008 +0.0024 +0.0017 +0.0014
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0014 0.0016 +0.0032 +0.0033 +0.0034 +0.0033 +0.0002
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0007 0.0033 +0.0014 +0.0036 +0.0048 +0.0026
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0011 0.0017 +0.0042 +0.0036 +0.0027 +0.0006
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0003 -0.0001 +0.0017 +0.0014 +0.0007 +0.0012 +0.0003
Seer_Astral_45_Entrapment -0.0011 -0.0003
Seer_Astral_single_Entrapment -0.0022 -0.0001 0.0002 +0.0024 +0.0002
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0016
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0002 0.0016 +0.0028 +0.0018
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0026 -0.0016 +0.0001 +0.0010
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0019 -0.0021 -0.0019 -0.0018 -0.0024 -0.0023 -0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0019 -0.0013 -0.0005 +0.0000 +0.0007 +0.0005 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0003 -0.0011 +0.0025 +0.0022 +0.0018 -0.0008
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 0.0005 -0.0002 +0.0036 +0.0020 +0.0023 +0.0012 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0028 -0.0016 +0.0021 +0.0019 -0.0003 -0.0001 +0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0014 -0.0022 +0.0001 +0.0005 +0.0015 -0.0008
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0022 -0.0017 -0.0000
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0018
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0015 -0.0008 +0.0019 -0.0014 +0.0009 +0.0008 +0.0007
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0023
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0021 -0.0013 +0.0024 +0.0010 +0.0019 +0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 0.0013 -0.0045 +0.0004 +0.0011 +0.0013 -0.0002 -0.0058
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0010 0.0005 +0.0049 +0.0038 +0.0046 +0.0036 -0.0005
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0022 -0.0005 +0.0019 +0.0029 +0.0035 +0.0035 +0.0017
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0049 -0.0002 -0.0019 -0.0008 -0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0031 -0.0030 +0.0002 -0.0017 -0.0016 -0.0005 +0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0023 -0.0015 +0.0006 +0.0031 +0.0022 +0.0017 +0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0029 +0.0010 -0.0010 +0.0009 +0.0000 +0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0039 0.0017 +0.0055 +0.0058 +0.0036 +0.0047 -0.0022
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0018 0.0002 +0.0015 +0.0034 +0.0005 +0.0003 +0.0020
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0014 0.0100 +0.0160 +0.0182 +0.0147 +0.0100 +0.0086
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0016 0.0018 +0.0118 +0.0087 +0.0073 +0.0066 +0.0034
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0023 0.0018 +0.0058 +0.0054 +0.0026 +0.0046 -0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0013 -0.0003 +0.0016 -0.0004 +0.0040 +0.0042 +0.0010
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0021 0.0000 +0.0032 -0.0066 -0.0028 -0.0003 -0.0021
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0007 0.0023 +0.0043 +0.0045 +0.0014 +0.0051 +0.0030
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0027 -0.0005 +0.0019 +0.0013 +0.0017 +0.0024 +0.0023
Seer_Astral_45_Entrapment -0.0029 -0.0010
Seer_Astral_single_Entrapment -0.0074 -0.0000 0.0020 +0.0094 +0.0020
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 2195 6613 -17782 +4418

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -19 174 -597 +193

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0263 -0.0053 +0.0263

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 110 450 -394 +340

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -8 -61 -251 -53

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 14 12 +4 +1 +1 -1 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 11 +4 +0 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 12 13 +3 +0 +1 -2 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 0 1 +0 +1 +0 -2 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 0 1 +0 +1 +0 -2 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 0 +0 +1 -1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1634 0.1652 +0.0194 +0.0232 +0.0252 +0.0279 +0.0018
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1552 0.1560 +0.0167 +0.0198 +0.0209 +0.0237 +0.0008
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1576 0.1615 +0.0160 +0.0191 +0.0208 +0.0039
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1474 0.1503 -0.0028 +0.0094 +0.0127 +0.0147 +0.0029
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1685 0.1710 +0.0013 +0.0071 +0.0095 +0.0111 +0.0025
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1445 0.1463 -0.0040 +0.0097 +0.0126 +0.0140 +0.0017
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1531 +0.0051 +0.0032 +0.0036 +0.0026 -0.0000
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1536
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5931 0.5939 +0.0070 +0.0008
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2012 0.2052 +0.0336 +0.0040

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0841 0.0844 +0.0081 +0.0105 +0.0117 +0.0124 +0.0003
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0803 0.0805 +0.0081 +0.0102 +0.0105 +0.0117 +0.0001
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0737 0.0751 +0.0078 +0.0091 +0.0093 +0.0014
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0649 0.0648 -0.0130 +0.0045 +0.0055 +0.0059 -0.0002
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0787 0.0800 +0.0008 +0.0044 +0.0047 +0.0028 +0.0013
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0632 0.0636 -0.0135 +0.0068 +0.0067 +0.0067 +0.0004
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0470
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0987 0.0985 -0.0043 -0.0034 -0.0051 -0.0042 -0.0002
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1012
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5808 0.5812 -0.0069 +0.0004
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1362 0.1380 +0.0147 +0.0019

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0035 0.0008 -0.0020 +0.0070 +0.0012 -0.0742 -0.0027
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0146 -0.0137 -0.0076 +0.0055 -0.0002 -0.0262 -0.0009
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0075 -0.0092 +0.0007 -0.0023 -0.0001 +0.0066 +0.0017
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0726 -0.0754 +0.0012 -0.0008 +0.0020 -0.0543 +0.0028
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0707 -0.0717 -0.0054 -0.0006 -0.0003 -0.0015 +0.0011
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0577 -0.0571 -0.0080 +0.0050 -0.0016 +0.0286 -0.0005
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0481 +0.0114 +0.0329 -0.0052 -0.0480
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1834 +0.0115 +0.0151 +0.0011 -0.0457
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1791 -0.0082 +0.0282 -0.0195 +0.1593
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0329 +0.0067 +0.0305 +0.0014 -0.0093
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3275 +0.0081 +0.0093 -0.0002 -0.0154
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1236 -0.0024 -0.0402 -0.0016 +0.0901
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1225 +0.0108 -0.0145 +0.0012 +0.0495
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2185 +0.0015 +0.0038 -0.0038 -0.0093
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2388 +0.0262 -0.0191 +0.0011 +0.0365
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1347 0.1334 -0.0059 -0.0059 +0.0211 -0.1017 -0.0014
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0842 -0.0845 +0.0062 +0.0047 -0.0191 +0.0237 +0.0002
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2015 0.2000 +0.0183 -0.0240 +0.0287 -0.0770 -0.0015
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1038 0.1045 +0.0048 -0.0054 -0.0067 +0.0156 +0.0007
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0482 +0.0009 +0.0001 -0.0089 +0.0026 +0.0001
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2149 0.2158 +0.0051 -0.0017 +0.0004 +0.0113 +0.0009
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1482 0.1446 -0.0032 -0.0062 -0.0160 +0.1258 -0.0036
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0795 -0.0785 +0.0043 -0.0045 -0.0054 -0.0225 -0.0010
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0442 0.0507 +0.0169 -0.0238 +0.0355 -0.0523 +0.0065
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0335 +0.0195 +0.0041 +0.0006 -0.0438
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 0.0007 -0.0031 +0.0125 +0.0006 -0.0674
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0303 -0.0051 -0.0071 +0.0012 +0.0267
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0765 +0.0119 -0.0026 -0.0002 +0.0340
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0248
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0149 -0.0331 +0.0073 +0.0004 -0.0081
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0564
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1523 -0.0356 -0.0145 +0.0024 +0.0936
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1005 -0.0468 -0.0064 -0.0010 +0.0637

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0080 0.0010 +0.0009 +0.0076 -0.0005 -0.0653 -0.0070
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0148 -0.0150 -0.0089 +0.0045 +0.0004 -0.0263 +0.0002
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0007 -0.0001 +0.0054 -0.0044 +0.0010 -0.0029 -0.0006
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0693 -0.0770 +0.0013 +0.0005 -0.0055 -0.0513 +0.0077
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0694 -0.0699 -0.0060 -0.0005 -0.0005 -0.0007 +0.0005
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0546 -0.0489 -0.0084 +0.0078 -0.0007 +0.0236 -0.0057
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0517 +0.0142 +0.0365 -0.0057 -0.0387
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1335 +0.0050 +0.0043 -0.0072 -0.0299
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1920 -0.0338 -0.0246 +0.0154 +0.1748
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0269 +0.0064 +0.0290 +0.0021 -0.0255
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3006 +0.0072 +0.0066 -0.0010 -0.0050
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1154 +0.0002 -0.0402 -0.0012 +0.0866
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1070 +0.0124 -0.0135 -0.0021 +0.0560
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1976 -0.0003 +0.0009 -0.0042 +0.0019
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2026 +0.0289 -0.0188 +0.0012 +0.0223
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1578 0.1590 -0.0077 -0.0028 +0.0144 -0.0633 +0.0012
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0767 -0.0790 +0.0048 +0.0016 -0.0170 +0.0210 +0.0023
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2340 0.2372 +0.0504 -0.0481 +0.0073 -0.0314 +0.0032
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.1002 0.0985 +0.0031 -0.0032 -0.0081 +0.0243 -0.0017
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0438 -0.0444 +0.0011 -0.0008 -0.0084 +0.0017 +0.0006
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2253 0.2255 +0.0036 -0.0008 +0.0016 +0.0220 +0.0002
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1313 0.1259 +0.0005 -0.0096 -0.0297 +0.1267 -0.0054
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0800 -0.0774 +0.0056 -0.0034 -0.0033 -0.0285 -0.0026
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0598 0.0658 +0.0405 -0.0089 +0.0322 -0.0574 +0.0060
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0499 +0.0258 +0.0029 -0.0003 -0.0201
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0205 -0.0049 +0.0142 +0.0054 -0.0473
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0264 -0.0001 -0.0108 +0.0000 +0.0223
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0819 +0.0137 -0.0048 +0.0001 +0.0412
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0977 -0.0232 +0.0027 +0.0012 +0.0352
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0176 -0.0350 +0.0076 +0.0002 -0.0041
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0664 +0.0131 -0.0109 +0.0003 +0.0548
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1598 -0.0435 -0.0160 +0.0023 +0.1020
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0931 -0.0508 -0.0078 +0.0009 +0.0488

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1258 0.1266 +0.0343 +0.0202 -0.0086 -0.1820 +0.0008
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1101 0.1144 +0.0169 -0.0058 +0.0004 -0.0998 +0.0043
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1125 0.1190 +0.0117 -0.0078 +0.0011 -0.1483 +0.0064
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1308 0.1431 +0.0441 -0.0007 -0.0136 -0.1672 +0.0123
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1234 0.1266 +0.0164 -0.0031 -0.0002 -0.0959 +0.0033
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1269 0.1285 +0.0170 -0.0063 +0.0017 -0.1411 +0.0015
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1721 +0.0354 +0.0384 -0.0420 -0.4036
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2153 +0.0422 -0.0321 -0.0167 -0.1348
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3083 +0.2175 -0.0279 -0.1166 -0.9328
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1373 +0.0427 +0.0074 -0.0036 -0.1191
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2297 +0.0473 +0.0030 -0.0078 -0.1059
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1773 +0.0549 +0.0262 -0.0056 -0.2028
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1390 +0.0358 +0.0129 -0.0110 -0.1925
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1927 +0.0274 +0.0045 -0.0018 -0.0927
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1932 +0.0778 +0.0001 -0.0169 -0.3452
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.2070 0.1875 +0.0445 +0.0761 -0.1281 -0.3638 -0.0196
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0477 0.0485 -0.0103 +0.0134 -0.0147 -0.1035 +0.0008
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2703 0.3018 -0.0030 +0.1483 +0.0078 -0.6872 +0.0316
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1850 0.1851 +0.0037 +0.0045 +0.0051 -0.1654 +0.0001
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0420 0.0430 +0.0676 -0.0087 -0.0168 -0.1098 +0.0011
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1833 0.1860 +0.0316 +0.0062 -0.0049 -0.1521 +0.0027
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2082 0.2052 -0.0093 +0.0378 -0.0706 -0.3686 -0.0030
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0563 0.0596 +0.0977 -0.0155 +0.0159 -0.1915 +0.0033
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.3837 0.4715 +0.0737 +0.1982 -0.0827 -0.8914 +0.0878
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1070 +0.0321 -0.0450 -0.0051 -0.3757
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1330 +0.0200 -0.0293 -0.0344 -0.4089
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0731 +0.0068 -0.0387 -0.0080 -0.0336
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0861 +0.0190 -0.0584 -0.0028 -0.0659
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0956 +0.0281 -0.0478 -0.0031 -0.0987
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0875 +0.0273 -0.0601 -0.0037 -0.0465
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0890 +0.0130 -0.0614 -0.0008 -0.0959
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1480 +0.0619 -0.0455 -0.0143 -0.4260
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1024 +0.0688 -0.0494 -0.0103 -0.3948

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0673 0.0570 +0.0149 -0.0182 -0.0054 -0.0534 -0.0103
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0360 0.0350 +0.0035 +0.0005 +0.0043 -0.0455 -0.0010
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0437 0.0396 -0.0157 -0.0104 +0.0083 -0.0685 -0.0041
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0471 0.0483 -0.0042 +0.0002 -0.0084 -0.0725 +0.0012
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0368 0.0383 +0.0032 -0.0030 +0.0035 -0.0348 +0.0015
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0486 0.0521 +0.0000 +0.0073 -0.0081 -0.0769 +0.0036
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0796 +0.0402 -0.0136 +0.0467 -0.1860
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0780 +0.0316 -0.0208 -0.0112 -0.0306
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1184 +0.1306 -0.0136 -0.0647 -0.2744
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0243 +0.0032 +0.0034 -0.0021 -0.0222
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0441 +0.0110 -0.0047 +0.0013 -0.0184
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0244 +0.0055 -0.0000 +0.0038 -0.0376
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0277 +0.0026 +0.0079 -0.0036 -0.0354
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0098
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0353 +0.0296 -0.0022 -0.0025 -0.0855
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0517 0.0480 +0.0146 +0.0452 -0.0355 -0.1759 -0.0038
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0188 0.0174 -0.0057 -0.0062 -0.0031 -0.0297 -0.0014
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0643 0.0995 -0.1294 +0.1626 +0.0090 -0.4363 +0.0352
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0327 0.0336 -0.0046 +0.0074 +0.0016 -0.0363 +0.0008
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0095 0.0094 +0.0109 -0.0066 +0.0090 -0.0338 -0.0002
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0368 0.0353 -0.0053 +0.0093 +0.0025 -0.0455 -0.0015
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0636 0.0632 -0.0166 +0.0170 -0.0166 -0.1538 -0.0004
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0207 0.0192 +0.0068 -0.0006 -0.0039 -0.0531 -0.0014
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1671 0.1308 -0.0891 -0.0032 -0.0082 -0.2633 -0.0363
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0496 +0.0682 -0.0593 -0.0056 -0.1728
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0620 +0.0668 -0.0849 -0.0031 -0.1815
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0330 +0.0113 -0.0357 +0.0198 -0.0198
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0246 -0.0054 -0.0154 +0.0040 -0.0242
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0269 -0.0011 -0.0225 +0.0112 -0.0339
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0236 +0.0094 -0.0181 -0.0013 -0.0221
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0373 -0.0134 -0.0199 -0.0090 -0.0302
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0432 +0.0271 -0.0671 +0.0055 -0.2161
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0427 +0.0501 -0.0498 +0.0220 -0.2327

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 119.5600
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 16.0500 13.9000 -10.1700 -3.4200 -5.9700 -3.2300 -2.1500 -42.2518% -19.7460% -30.0453% -18.8558% -13.3956%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.6100 8.4600 -4.2900 -0.6100 +0.1000 -0.8300 -0.1500 -33.6471% -6.7255% +1.1962% -8.9343% -1.7422%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.7400 9 -3.3100 +0.0400 -0.6600 -1.8100 +1.2600 -26.8887% +0.4464% -6.8323% -16.7438% +16.2791%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.1100 4.2500 +0.0200 -0.1600 -0.6900 +0.1400 +0.4728% -3.6281% -13.9676% +3.4063%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.2700 4.9900 -0.3900 +0.6100 +0.2400 +0.4500 +0.7200 -7.2491% +13.9269% +5.0526% +9.9119% +16.8618%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.1000 4.2900 -1.1400 +0.1500 -0.1500 -0.3700 +0.1900 -20.9945% +3.6232% -3.3784% -7.9399% +4.6341%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5600 5.0100 -0.5400 +0.5900 +0.4800 +0.5500 +0.4500 -9.7297% +13.3484% +10.5960% +12.3318% +9.8684%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 21.8200
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 14.0700 14.2900 -13.3700 -5.4700 -4.0300 -4.9900 +0.2200 -48.3369% -27.6822% -21.9978% -25.8817% +1.5636%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 10.2600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3400 4.4600 -1.3300 -0.1300 -0.1900 +0.3700 +0.1200 -22.9706% -2.8322% -4.0860% +9.0465% +2.7650%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 4.6300 4.7000 -1.5600 +0.3000 -1.1800 +0.0700 -24.9201% +6.8182% -20.0680% +1.5119%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.4000 4.9400 +0.4200 +1.2100 +0.1400 +1.3000 +0.5400 +9.2920% +32.4397% +2.9167% +35.7143% +12.2727%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.1600 4.0400 -1.7000 +0.5300 +0.1200 +0.6000 -0.1200 -29.6167% +15.0997% +3.0612% +17.4419% -2.8846%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4300 5.2600 -1.8100 -0.2700 -0.2500 -0.4800 -0.1700 -25.6011% -4.8825% -4.5372% -8.3624% -3.1308%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.5500 5.8700 -1.7200 +0.1400 -0.2700 +0.3300 +0.3200 -22.6614% +2.4433% -4.3974% +5.9567% +5.7658%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2300 5.1100 -1.3400 +0.4400 +0.8100 +0.7000 -0.1200 -20.7752% +9.4218% +18.8372% +15.8730% -2.2945%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.8800 10.5800 +3.2000 +5.6500 +5.9500 +4.9600 +5.7000 +43.3604% +114.6045% +128.5097% +88.2562% +116.8033%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.3600 4.1500 -0.5900 +0.4900 +0.7600 -0.2100 -12.4473% +13.3880% +22.4189% -4.8165%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.3300 4.3500 -0.9100 +0.5100 +0.5900 +0.0200 -17.3004% +13.2812% +15.6915% +0.4619%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 4 3.8400 -0.8100 +0.4100 +0.1300 +0.3900 -0.1600 -17.4194% +11.9534% +3.5040% +11.3043% -4.0000%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.4700 4.3700 +0.2000 +1.0800 +0.6800 +1.1000 -0.1000 +4.7962% +32.8267% +18.4282% +33.6391% -2.2371%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2000 4.2300 -1.0500 +0.7000 +0.6300 +0.7400 +0.0300 -19.8864% +19.8300% +17.5000% +21.2034% +0.7143%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.2900 4.4000 -1.1100 +0.5800 +0.2500 -0.4100 +0.1100 -20.1452% +15.1832% +6.0241% -8.5239% +2.5641%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.4000 4.9600 +0.2300 +1.5000 +1.3900 +0.5600 +4.8626% +43.3526% +38.9356% +12.7273%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.7000 4.7300 +0.0800 +1.1100 +1.0000 +0.9500 +0.0300 +1.7204% +30.6630% +26.8097% +25.1323% +0.6383%
SCP_Astral_MBR 9.0400 6.5500 6.1000 6.7300 6.7900 -2.2500 +0.2400 +0.6900 +0.0600 -24.8894% +3.6641% +11.3115% +0.8915%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 85.2100
Seer_Astral_single 4.4700 4.1400 5.5800 5.2300 5.4700 +1 +1.3300 -0.1100 +0.2400 +22.3714% +32.1256% -1.9713% +4.5889%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 114.6600
EWZ_2P_MBR_Exploris 26.1800 20.0200 19.2900 -6.8900 -0.7300 -26.3178% -3.6464%
EWZ_2P_MBR_Exploris_Human 12.9100 11.2900 12.8100 -0.1000 +1.5200 -0.7746% +13.4632%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 12.3500 12.7500 +0.6900 +0.4000 +5.7214% +3.2389%
MacCoss_Eclipse_Normalization_noNorm 27.5100 26.9000 30.3300 +2.8200 +3.4300 +10.2508% +12.7509%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 27.3700 30.4000 +2.7300 +3.0300 +9.8663% +11.0705%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png