Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6656655
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1292235 1287266 +190772 -19739 -24689 -6275 -4969 +17.3984% -1.5102% -1.8818% -0.4851% -0.3845%
MTAC_3P_Alternating 586322 615762 610710 599881 621395 624578 +38256 +8816 +13868 +24697 +3183 +6.5247% +1.4317% +2.2708% +4.1170% +0.5122%
MTAC_3P_Standard 596590 623022 617574 607435 625424 627232 +30642 +4210 +9658 +19797 +1808 +5.1362% +0.6757% +1.5639% +3.2591% +0.2891%
MTAC_Yeast_Alternating_3min 137548 136839 135560 145706 145840 +8292 +9001 +10280 +134 +6.0284% +6.5778% +7.5834% +0.0920%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 164379 164914 +9273 +8363 +8405 +9879 +535 +5.9579% +5.3420% +5.3703% +6.3721% +0.3255%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 148110 148433 +9924 +9048 +9141 +10548 +323 +7.1649% +6.4914% +6.5625% +7.6499% +0.2181%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 165591 166786 +7824 +8054 +7626 +8864 +1195 +4.9219% +5.0740% +4.7914% +5.6129% +0.7217%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3412790
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1319303 1319655 +296919 +164986 +195782 +135571 +352 +29.0318% +14.2886% +17.4203% +11.4494% +0.0267%
SCIEX_3P 672242 749525 722698 714454 743897
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 53263 53854 +12972 +12154 +11429 +11754 +591 +31.7303% +29.1463% +26.9393% +27.9192% +1.1096%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 51247 51108 +10039 +8706 +9085 +9956 -139 +24.4442% +20.5321% +21.6191% +24.1932% -0.2712%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 42044 42131 +33391 +19016 +19116 +19218 +87 +382.0481% +82.2669% +83.0589% +83.8738% +0.2069%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 28680 29067 +12132 +11514 +10658 +10719 +387 +71.6386% +65.5956% +57.8956% +58.4205% +1.3494%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 114502 114875 +14967 +11984 +15892 +16227 +373 +14.9808% +11.6473% +16.0553% +16.4494% +0.3258%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 85070 85060 +13962 +12332 +13615 +13934 -10 +19.6377% +16.9563% +19.0566% +19.5906% -0.0118%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 123935 124429 +18725 +17932 +18807 +19995 +494 +17.7146% +16.8380% +17.8059% +19.1461% +0.3986%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 128906 129849 +14692 +12533 +15527 +16768 +943 +12.7582% +10.6831% +13.5818% +14.8283% +0.7315%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 18714 18799 +8605 +7993 +7561 +7566 +85 +84.4124% +73.9682% +67.2807% +67.3551% +0.4542%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 20673 20935 +6128 +5502 +4894 +5236 +262 +41.3858% +35.6509% +30.5093% +33.3524% +1.2674%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 8726 8639 +7378 +6607 +6189 +6253 -87 +585.0912% +325.1476% +252.6122% +262.0704% -0.9970%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 16166 16024 +14588 +11241 +10334 +10293 -142 +1015.8774% +235.0199% +181.6169% +179.6022% -0.8784%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 32026 31968 +10258 +10073 +9388 +9505 -58 +47.2501% +46.0059% +41.5766% +42.3140% -0.1811%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 32256 31882 +6022 +5739 +5622 +6257 -374 +23.2869% +21.9523% +21.4090% +24.4176% -1.1595%
SCP_Astral_500pg_3ms 3484 6898 6834 19322 19767 +16283 +12869 +12933 +445 +467.3651% +186.5613% +189.2450% +2.3031%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 28202 27845 +17146 +16371 +14963 +14956 -357 +160.2580% +142.6791% +116.1543% +116.0369% -1.2659%
SCP_Astral_MBR 92167 93585 91884 90864 108777 109389 +17222 +15804 +17505 +18525 +612 +18.6856% +16.8873% +19.0512% +20.3876% +0.5626%
Seer_Astral_45 2512737 3124006 3135497 2971207 3001003
Seer_Astral_single 56699 55793 55891 60660 60977 +4278 +5184 +5086 +317 +7.5451% +9.2915% +9.0999% +0.5226%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17275427
EWZ_2P_MBR_Exploris 1776128 1865977 1869474 +93346 +3497 +5.2556% +0.1874%
EWZ_2P_MBR_Exploris_Human 836809 881569 884439 +47630 +2870 +5.6919% +0.3256%
EWZ_2P_MBR_Exploris_YeastHuman 914924 977795 981967 +67043 +4172 +7.3277% +0.4267%
MacCoss_Eclipse_Normalization_noNorm 2078034 2247711 2252899 +174865 +5188 +8.4149% +0.2308%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2247711 2252899 +174865 +5188 +8.4149% +0.2308%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 107890
KEAP1KO_Eclipse 111504 133619 131359 132031 148329 147965 +36461 +14346 +16606 +15934 -364 +32.6993% +10.7365% +12.6417% +12.0684% -0.2454%
MTAC_3P_Alternating 108267 117352 114659 114816 123799 124620 +16353 +7268 +9961 +9804 +821 +15.1043% +6.1933% +8.6875% +8.5389% +0.6632%
MTAC_3P_Standard 110265 118693 115800 116148 124703 125433 +15168 +6740 +9633 +9285 +730 +13.7560% +5.6785% +8.3187% +7.9941% +0.5854%
MTAC_Yeast_Alternating_3min 48858 49032 48995 55378 55307 +6449 +6275 +6312 -71 +13.1995% +12.7978% +12.8829% -0.1282%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 61497 61923 +7954 +6848 +6083 +6039 +426 +14.7381% +12.4340% +10.8936% +10.8063% +0.6927%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 56180 56561 +7940 +6896 +6272 +6101 +381 +16.3304% +13.8850% +12.4719% +12.0908% +0.6782%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 62196 62568 +7508 +6649 +5861 +5741 +372 +13.6360% +11.8904% +10.3356% +10.1026% +0.5981%
Olsen_Astral_3P 198770 231103 234505 234149 239695
Olsen_Exploris_3P 51272 58784 55047 58593 72007 72157 +20885 +13373 +17110 +13564 +150 +40.7337% +22.7494% +31.0825% +23.1495% +0.2083%
SCIEX_3P 82206 93920 87927 87858 102130
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 20401 20546 +6106 +5588 +5297 +4839 +145 +42.2853% +37.3579% +34.7367% +30.8079% +0.7107%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 19303 19147 +4664 +4082 +4231 +4077 -156 +32.2033% +27.0959% +28.3655% +27.0537% -0.8082%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 17210 17183 +8443 +7807 +7794 +7819 -27 +96.6018% +83.2658% +83.0120% +83.5006% -0.1569%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 16380 16652 +7754 +7393 +6868 +6842 +272 +87.1432% +79.8466% +70.1962% +69.7452% +1.6606%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 41662 41788 +6923 +5491 +7446 +7363 +126 +19.8566% +15.1280% +21.6819% +21.3885% +0.3024%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 31075 31075 +6426 +5609 +5956 +5852 +0 +26.0700% +22.0254% +23.7111% +23.2010% +0%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 45956 46270 +9582 +8594 +8621 +8849 +314 +26.1175% +22.8103% +22.8984% +23.6471% +0.6833%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 46670 47161 +7005 +5616 +7118 +7268 +491 +17.4445% +13.5179% +17.7759% +18.2187% +1.0521%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 7634 7688 +4022 +3739 +3479 +3442 +54 +109.7109% +94.6822% +82.6562% +81.0645% +0.7074%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 8261 8368 +3069 +2757 +2513 +2302 +107 +57.9166% +49.1356% +42.9206% +37.9492% +1.2952%
SCP_Astral_250pg_3ms 675 721 908 879 4172 4049 +3374 +3328 +3141 +3170 -123 +499.8519% +461.5811% +345.9251% +360.6371% -2.9482%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 6891 6787 +5351 +5049 +4642 +4624 -104 +372.6323% +290.5063% +216.4103% +213.7772% -1.5092%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 12669 12741 +4947 +4769 +4489 +4335 +72 +63.4719% +59.8219% +54.3989% +51.5703% +0.5683%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 12395 12307 +3149 +2965 +2936 +2893 -88 +34.3852% +31.7384% +31.3307% +30.7308% -0.7100%
SCP_Astral_500pg_3ms 1846 2600 2586 8323 8526 +6680 +5926 +5940 +203 +361.8635% +227.9231% +229.6984% +2.4390%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 11257 11068 +7194 +6913 +6294 +6263 -189 +185.6995% +166.3779% +131.8391% +130.3434% -1.6790%
SCP_Astral_MBR 24110 24991 24570 24544 30152 30234 +6124 +5243 +5664 +5690 +82 +25.4002% +20.9796% +23.0525% +23.1829% +0.2720%
Seer_Astral_45 69584 90103 87204 87620 91412
Seer_Astral_single 56699 55793 55891 60660 60977 +4278 +5184 +5086 +317 +7.5451% +9.2915% +9.0999% +0.5226%
YEAST_KO_Astral 66823 87888 87428 86498 85126
EWZ_2P_MBR_Exploris 55271 61651 61708 +6437 +57 +11.6463% +0.0925%
EWZ_2P_MBR_Exploris_Human 48465 53608 53934 +5469 +326 +11.2844% +0.6081%
EWZ_2P_MBR_Exploris_YeastHuman 51246 57183 57570 +6324 +387 +12.3405% +0.6768%
MacCoss_Eclipse_Normalization_noNorm 73278 79190 79323 +6045 +133 +8.2494% +0.1680%
MacCoss_Eclipse_Normalization_yesNorm 73278 79190 79323 +6045 +133 +8.2494% +0.1680%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 604895
KEAP1KO_Eclipse 87920 92888 93982 93441 90649 90644 +2724 -2244 -3338 -2797 -5 +3.0983% -2.4158% -3.5517% -2.9933% -0.0055%
MTAC_3P_Alternating 63773 63974 63611 63015 65375 65608 +1835 +1634 +1997 +2593 +233 +2.8774% +2.5542% +3.1394% +4.1149% +0.3564%
MTAC_3P_Standard 64317 64464 64219 63385 65743 66006 +1689 +1542 +1787 +2621 +263 +2.6261% +2.3920% +2.7827% +4.1350% +0.4000%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12589 12613 +546 +643 +673 +24 +4.5247% +5.3718% +5.6365% +0.1906%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12877 12903 +471 +432 +541 +575 +26 +3.7886% +3.4640% +4.3763% +4.6642% +0.2019%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12568 12564 +556 +517 +604 +596 -4 +4.6302% +4.2915% +5.0502% +4.9799% -0.0318%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12961 12984 +423 +519 +507 +574 +23 +3.3676% +4.1637% +4.0635% +4.6253% +0.1775%
Olsen_Astral_3P 236395 245756 242430 240719 238322
Olsen_Exploris_3P 146224 153534 153990 155827 156821 157313 +11089 +3779 +3323 +1486 +492 +7.5836% +2.4613% +2.1579% +0.9536% +0.3137%
SCIEX_3P 70810 74366 72157 71550 73551
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 11410 11495 +2332 +1967 +1910 +2161 +85 +25.4502% +20.6444% +19.9270% +23.1519% +0.7450%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 11205 11195 +1897 +1434 +1783 +1642 -10 +20.4022% +14.6911% +18.9439% +17.1883% -0.0892%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 9023 9147 +6697 +3063 +2900 +3031 +124 +273.3469% +50.3452% +46.4223% +49.5585% +1.3743%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 6458 6483 +1780 +1895 +1525 +1560 +25 +37.8482% +41.3034% +30.7584% +31.6880% +0.3871%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 17253 17293 +1103 +1013 +1268 +1238 +40 +6.8128% +6.2224% +7.9126% +7.7110% +0.2318%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 14759 14703 +1104 +862 +1015 +1032 -56 +8.1182% +6.2279% +7.4153% +7.5488% -0.3794%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 17489 17570 +1318 +1294 +1453 +1645 +81 +8.1098% +7.9504% +9.0153% +10.3297% +0.4631%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 18141 18188 +1171 +1010 +1275 +1443 +47 +6.8814% +5.8796% +7.5386% +8.6175% +0.2591%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 5202 5197 +1550 +1284 +1333 +1658 -5 +42.5007% +32.8137% +34.4979% +46.8494% -0.0961%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5561 5682 +1382 +1079 +885 +705 +121 +32.1395% +23.4412% +18.4490% +14.1652% +2.1759%
SCP_Astral_250pg_3ms 576 22 936 741 2775 2639 +2063 +2617 +1703 +1898 -136 +358.1597% +11895.4545% +181.9444% +256.1404% -4.9009%
SCP_Astral_250pg_6ms 637 2080 2029 2046 4489 4541 +3904 +2461 +2512 +2495 +52 +612.8728% +118.3173% +123.8048% +121.9453% +1.1584%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7731 7738 +1493 +1392 +1722 +1611 +7 +23.9071% +21.9351% +28.6237% +26.2935% +0.0905%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 8125 8135 +1413 +1406 +1123 +1112 +10 +21.0205% +20.8946% +16.0154% +15.8337% +0.1231%
SCP_Astral_500pg_3ms 982 2365 2177 5275 5113 +4131 +2748 +2936 -162 +420.6721% +116.1945% +134.8645% -3.0711%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 7102 7108 +3400 +3101 +3063 +3190 +6 +91.6936% +77.3896% +75.7231% +81.4191% +0.0845%
SCP_Astral_MBR 20165 20129 20074 19793 20566 20639 +474 +510 +565 +846 +73 +2.3506% +2.5337% +2.8146% +4.2742% +0.3550%
Seer_Astral_45 225377 241455 241952 237727 233436
Seer_Astral_single 4685 4700 4632 5060 5060 +375 +360 +428 +0 +8.0043% +7.6596% +9.2401% +0%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1341725
EWZ_2P_MBR_Exploris 245259 247748 248831 +3572 +1083 +1.4564% +0.4371%
EWZ_2P_MBR_Exploris_Human 115447 115558 115956 +509 +398 +0.4409% +0.3444%
EWZ_2P_MBR_Exploris_YeastHuman 128968 131740 132524 +3556 +784 +2.7573% +0.5951%
MacCoss_Eclipse_Normalization_noNorm 178174 187459 188768 +10594 +1309 +5.9459% +0.6983%
MacCoss_Eclipse_Normalization_yesNorm 178174 187459 188768 +10594 +1309 +5.9459% +0.6983%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6423
KEAP1KO_Eclipse 7845 8175 8155 8203 8439 8433 +588 +258 +278 +230 -6 +7.4952% +3.1560% +3.4090% +2.8039% -0.0711%
MTAC_3P_Alternating 11361 11494 11351 11338 12050 12113 +752 +619 +762 +775 +63 +6.6191% +5.3854% +6.7131% +6.8354% +0.5228%
MTAC_3P_Standard 11473 11560 11477 11396 12069 12117 +644 +557 +640 +721 +48 +5.6132% +4.8183% +5.5764% +6.3268% +0.3977%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4390 4395 +267 +303 +295 +5 +6.4680% +7.4047% +7.1951% +0.1139%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4457 4461 +246 +213 +243 +247 +4 +5.8363% +5.0141% +5.7610% +5.8614% +0.0897%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4358 4365 +290 +231 +275 +268 +7 +7.1166% +5.5878% +6.7237% +6.5414% +0.1606%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4452 4471 +222 +234 +227 +240 +19 +5.2248% +5.5228% +5.3487% +5.6724% +0.4268%
Olsen_Astral_3P 13820 14378 14293 14296 14585
Olsen_Exploris_3P 7255 7582 7340 7479 7941 7977 +722 +395 +637 +498 +36 +9.9518% +5.2097% +8.6785% +6.6586% +0.4533%
SCIEX_3P 8652 9109 8679 8618 9438
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 4115 4141 +896 +752 +730 +823 +26 +27.6117% +22.1894% +21.4013% +24.8041% +0.6318%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 4006 3977 +723 +544 +686 +543 -29 +22.2188% +15.8462% +20.8447% +15.8125% -0.7239%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3337 3416 +966 +1020 +966 +1019 +79 +39.4286% +42.5710% +39.4286% +42.5115% +2.3674%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3456 3489 +981 +1053 +855 +847 +33 +39.1148% +43.2266% +32.4601% +32.0590% +0.9549%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 6011 6048 +469 +392 +544 +502 +37 +8.4065% +6.9307% +9.8837% +9.0516% +0.6155%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 5220 5176 +455 +338 +393 +365 -44 +9.6378% +6.9864% +8.2166% +7.5868% -0.8429%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 6134 6174 +563 +519 +578 +621 +40 +10.0339% +9.1777% +10.3288% +11.1831% +0.6521%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6326 6333 +487 +384 +490 +528 +7 +8.3305% +6.4549% +8.3861% +9.0956% +0.1107%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1985 1943 +651 +519 +537 +655 -42 +50.3870% +36.4466% +38.1935% +50.8540% -2.1159%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 2003 2104 +536 +444 +346 +231 +101 +34.1837% +26.7470% +19.6815% +12.3332% +5.0424%
SCP_Astral_250pg_3ms 307 8 350 283 1162 1108 +801 +1100 +758 +825 -54 +260.9121% +13750% +216.5714% +291.5194% -4.6472%
SCP_Astral_250pg_6ms 637 756 751 766 1745 1745 +1108 +989 +994 +979 +0 +173.9403% +130.8201% +132.3569% +127.8068% +0%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2853 2855 +648 +580 +686 +625 +2 +29.3611% +25.4945% +31.6275% +28.0269% +0.0701%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2975 3015 +612 +627 +538 +476 +40 +25.4682% +26.2563% +21.7198% +18.7475% +1.3445%
SCP_Astral_500pg_3ms 525 902 828 2072 1968 +1443 +1066 +1140 -104 +274.8571% +118.1818% +137.6812% -5.0193%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2624 2612 +1294 +1165 +1126 +1177 -12 +98.1791% +80.5114% +75.7739% +82.0209% -0.4573%
SCP_Astral_MBR 4708 4720 4712 4715 5024 5018 +310 +298 +306 +303 -6 +6.5845% +6.3136% +6.4941% +6.4263% -0.1194%
Seer_Astral_45 5802 6297 6122 6133 6231
Seer_Astral_single 4685 4700 4632 5060 5060 +375 +360 +428 +0 +8.0043% +7.6596% +9.2401% +0%
YEAST_KO_Astral 4565 4795 4676 4673 4737
EWZ_2P_MBR_Exploris 7041 7234 7264 +223 +30 +3.1672% +0.4147%
EWZ_2P_MBR_Exploris_Human 6167 6252 6273 +106 +21 +1.7188% +0.3359%
EWZ_2P_MBR_Exploris_YeastHuman 6887 7138 7170 +283 +32 +4.1092% +0.4483%
MacCoss_Eclipse_Normalization_noNorm 5804 6247 6295 +491 +48 +8.4597% +0.7684%
MacCoss_Eclipse_Normalization_yesNorm 5804 6247 6295 +491 +48 +8.4597% +0.7684%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 604890
KEAP1KO_Eclipse 90611 90610 -1
MTAC_3P_Alternating 65364 65601 +237
MTAC_3P_Standard 65728 65991 +263
MTAC_Yeast_Alternating_3min 12579 12597 +18
MTAC_Yeast_Alternating_5min 12857 12884 +27
MTAC_Yeast_Standard_3min 12560 12547 -13
MTAC_Yeast_Standard_5min 12943 12972 +29
Olsen_Astral_3P 238278
Olsen_Exploris_3P 156819 157308 +489
SCIEX_3P 73546
SCP_Astral_1000pg_12ms 11409 11495 +86
SCP_Astral_1000pg_24ms 11204 11195 -9
SCP_Astral_1000pg_3ms 9020 9144 +124
SCP_Astral_1000pg_6ms 6450 6475 +25
SCP_Astral_10ng_12ms 17249 17283 +34
SCP_Astral_10ng_24ms 14758 14703 -55
SCP_Astral_10ng_3ms 17484 17557 +73
SCP_Astral_10ng_6ms 18141 18188 +47
SCP_Astral_250pg_12ms 5202 5197 -5
SCP_Astral_250pg_24ms 5557 5680 +123
SCP_Astral_250pg_3ms 2770 2637 -133
SCP_Astral_250pg_6ms 4489 4541 +52
SCP_Astral_500pg_12ms 7729 7738 +9
SCP_Astral_500pg_24ms 8124 8132 +8
SCP_Astral_500pg_3ms 5272 5100 -172
SCP_Astral_500pg_6ms 7098 7103 +5
SCP_Astral_MBR 20564 20637 +73
Seer_Astral_45 233431
Seer_Astral_single 5060 5060 +0
YEAST_KO_Astral 1341718
EWZ_2P_MBR_Exploris 247728 248809 +1081
EWZ_2P_MBR_Exploris_Human 115546 115942 +396
EWZ_2P_MBR_Exploris_YeastHuman 131734 132522 +788
MacCoss_Eclipse_Normalization_noNorm 187457 188766 +1309
MacCoss_Eclipse_Normalization_yesNorm 187457 188766 +1309

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0006 -0.0010 +0.0001 -0.0004
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0003 +0.0003 +0.0004
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0012 -0.0010 -0.0005 -0.0009 +0.0000 -0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0015 -0.0009 +0.0005 -0.0013 -0.0003 -0.0002 +0.0007
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0013 -0.0016 -0.0001 +0.0003 +0.0010 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0012 -0.0015 -0.0011 -0.0002 -0.0001 -0.0000 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0021 -0.0021 -0.0002 -0.0008 -0.0009 -0.0001 -0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0006 -0.0008 +0.0002 +0.0011 +0.0016 -0.0003
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0001 -0.0001 -0.0007 -0.0000
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0010 0.0008 +0.0010 +0.0005 +0.0019 +0.0003 -0.0002
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0021 -0.0019 +0.0003 +0.0010 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 0.0019 0.0012 +0.0066 +0.0045 +0.0044 +0.0058 -0.0007
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0005 0.0002 +0.0031 +0.0049 +0.0031 +0.0040 +0.0007
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0002 -0.0003 -0.0001 +0.0008 +0.0032 +0.0023 -0.0001
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0010 0.0005 +0.0027 +0.0022 +0.0029 +0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 0.0003 0.0004 +0.0024 -0.0005 +0.0018 +0.0017 +0.0000
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0002 -0.0005 +0.0019 +0.0021 +0.0013 +0.0012 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 0.0005 0.0000 +0.0008 -0.0000 +0.0022 +0.0012 -0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 0.0035 0.0040 +0.0078 +0.0080 +0.0037 +0.0092 +0.0004
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0000 0.0003 +0.0005 +0.0015 +0.0027 +0.0034 +0.0003
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0040 0.0027 +0.0095 +0.0027 -0.0013
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0012 0.0018 +0.0069 +0.0044 +0.0067 +0.0005
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 0.0001 0.0000 +0.0022 +0.0010 +0.0028 +0.0026 -0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0015 0.0027 +0.0040 +0.0051 +0.0039 +0.0038 +0.0013
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 0.0030 0.0022 +0.0035 +0.0045 +0.0057 -0.0008
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 0.0024 0.0032 +0.0063 +0.0064 +0.0046 +0.0008
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0009 0.0000 +0.0027 +0.0020 +0.0014 +0.0022 +0.0009
Seer_Astral_45_Entrapment -0.0023 -0.0002
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0005 +0.0027 +0.0003
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0030

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 0.0000
EWZ_2P_MBR_Exploris_Entrapment -0.0026 0.0004 -0.0003 +0.0023 -0.0007
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0026 -0.0031 -0.0001 -0.0005
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0041 -0.0031 -0.0021 -0.0020 -0.0036 -0.0038 +0.0011
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0031 -0.0027 -0.0015 -0.0002 +0.0002 -0.0002 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0028 -0.0035 +0.0031 +0.0018 +0.0013 -0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0009 -0.0021 +0.0021 +0.0018 +0.0028 +0.0013 -0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0033 -0.0054 +0.0004 -0.0007 -0.0034 -0.0027 -0.0021
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0032 +0.0004 +0.0014 +0.0024 +0.0009
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0043 -0.0043 -0.0041 -0.0000
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0023
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0022 +0.0007 -0.0020 +0.0006 -0.0013 -0.0017
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0027
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0022 -0.0008 +0.0041 +0.0033 +0.0034 +0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0060 -0.0052 +0.0018 +0.0007 +0.0018 +0.0019 +0.0008
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 0.0016 0.0010 +0.0069 +0.0069 +0.0082 +0.0082 -0.0007
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0007 -0.0007 +0.0011 +0.0043 +0.0036 +0.0039 +0.0000
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0065 -0.0047 +0.0007 -0.0007 +0.0007 +0.0018
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0035 -0.0046 -0.0013 -0.0023 -0.0029 -0.0001 -0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0006 -0.0013 +0.0023 +0.0060 +0.0053 +0.0047 -0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0036 -0.0031 +0.0023 -0.0011 +0.0022 +0.0015 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 0.0011 0.0011 +0.0064 +0.0087 +0.0045 +0.0075 -0.0000
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0011 0.0005 +0.0047 +0.0047 +0.0031 +0.0018 -0.0005
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0117 0.0106 +0.0134 +0.0106 +0.0192 +0.0106 -0.0011
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 0.0046 0.0034 +0.0133 +0.0100 +0.0118 +0.0122 -0.0013
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0032 0.0015 +0.0051 +0.0055 +0.0001 +0.0036 -0.0017
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0000 0.0000 +0.0020 +0.0001 +0.0051 +0.0062 +0.0000
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0024 0.0012 +0.0053 -0.0059 -0.0008 +0.0013 -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0018 0.0019 +0.0063 +0.0064 +0.0026 +0.0074 +0.0001
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0002 -0.0032 +0.0028 -0.0002 -0.0006 +0.0018 -0.0030
Seer_Astral_45_Entrapment -0.0049 -0.0013
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0008 +0.0082 -0.0012
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0008
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0003 -0.0003 +0.0009 +0.0000
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0005 -0.0004 -0.0002 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0005 -0.0006 -0.0004 -0.0009 -0.0004 -0.0005 -0.0000
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0007 -0.0003 +0.0006 -0.0005 +0.0001 +0.0000 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0009 -0.0011 -0.0001 +0.0002 +0.0003 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0007 -0.0007 -0.0003 +0.0000 +0.0003 +0.0001 +0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0015 -0.0016 -0.0008 -0.0009 -0.0009 -0.0006 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0004 -0.0005 +0.0003 +0.0005 +0.0009 -0.0002
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0003 +0.0001 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0010 0.0008 +0.0013 +0.0003 +0.0015 +0.0009 -0.0002
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0012 -0.0012 +0.0003 +0.0017 -0.0000
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 0.0007 0.0000 +0.0046 +0.0028 +0.0031 +0.0037 -0.0007
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0006 -0.0000 +0.0020 +0.0029 +0.0026 +0.0026 +0.0006
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 0.0001 -0.0004 -0.0006 +0.0002 +0.0024 +0.0020 -0.0005
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0008 0.0003 +0.0019 +0.0012 +0.0018 +0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 0.0002 0.0001 +0.0015 -0.0002 +0.0013 +0.0009 -0.0000
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0002 -0.0005 +0.0014 +0.0015 +0.0010 +0.0009 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0000 -0.0003 +0.0002 -0.0006 +0.0009 +0.0005 -0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0021 0.0024 +0.0054 +0.0051 +0.0027 +0.0056 +0.0003
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0006 0.0006 +0.0014 +0.0015 +0.0020 +0.0020 +0.0013
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0036 0.0016 +0.0076 +0.0016 -0.0020
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0020 0.0023 +0.0059 +0.0044 +0.0053 +0.0002
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 0.0004 0.0006 +0.0025 +0.0010 +0.0026 +0.0019 +0.0002
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0016 0.0023 +0.0038 +0.0040 +0.0040 +0.0039 +0.0007
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0033 0.0018 -0.0001 +0.0021 +0.0033 -0.0015
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 0.0017 0.0025 +0.0050 +0.0044 +0.0035 +0.0008
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0001 0.0002 +0.0019 +0.0017 +0.0010 +0.0015 +0.0002
Seer_Astral_45_Entrapment -0.0011 0.0000
Seer_Astral_single_Entrapment -0.0022 0.0002 0.0005 +0.0027 +0.0003
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0014

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 0.0007
EWZ_2P_MBR_Exploris_Entrapment -0.0012 0.0016 0.0009 +0.0021 -0.0007
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0016 -0.0016 +0.0000 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0021 -0.0018 -0.0017 -0.0016 -0.0021 -0.0021 +0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0013 -0.0012 -0.0004 +0.0002 +0.0009 +0.0006 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0003 +0.0033 +0.0030 +0.0026 +0.0008
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0015 +0.0022 +0.0006 +0.0010 -0.0002 -0.0013
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0016 -0.0028 +0.0010 +0.0007 -0.0014 -0.0012 -0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0022 -0.0020 +0.0003 +0.0007 +0.0017 +0.0002
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0022 -0.0023 -0.0018 -0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0016
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0008 -0.0015 +0.0011 -0.0022 +0.0002 +0.0001 -0.0008
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0012
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0013 -0.0012 +0.0025 +0.0011 +0.0020 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0045 -0.0041 +0.0008 +0.0015 +0.0017 +0.0003 +0.0004
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 0.0005 0.0001 +0.0045 +0.0034 +0.0042 +0.0032 -0.0004
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0005 -0.0005 +0.0019 +0.0030 +0.0035 +0.0035 +0.0000
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0049 -0.0039 +0.0009 -0.0008 +0.0003 +0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0039 -0.0007 -0.0025 -0.0024 -0.0013 -0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0015 -0.0021 +0.0000 +0.0025 +0.0016 +0.0011 -0.0006
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0029 -0.0028 +0.0010 -0.0010 +0.0010 +0.0001 +0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 0.0017 0.0019 +0.0057 +0.0060 +0.0038 +0.0049 +0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 0.0002 0.0005 +0.0019 +0.0037 +0.0009 +0.0006 +0.0003
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0100 0.0082 +0.0142 +0.0163 +0.0128 +0.0082 -0.0018
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 0.0018 0.0011 +0.0110 +0.0079 +0.0066 +0.0058 -0.0008
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0018 0.0015 +0.0055 +0.0051 +0.0023 +0.0043 -0.0003
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0003 0.0017 +0.0037 +0.0017 +0.0060 +0.0062 +0.0020
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0000 -0.0005 +0.0028 -0.0071 -0.0033 -0.0008 -0.0005
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0023 0.0033 +0.0053 +0.0055 +0.0024 +0.0061 +0.0010
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0005 -0.0010 +0.0014 +0.0007 +0.0012 +0.0018 -0.0005
Seer_Astral_45_Entrapment -0.0029 -0.0000
Seer_Astral_single_Entrapment -0.0074 0.0020 0.0012 +0.0086 -0.0008
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0024

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 6613 3068 -21327 -3545

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 174 178 -593 +4

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0263 0.0580 +0.0264 +0.0317

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 450 351 -493 -99

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -61 16 -174 +77

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0.0456 -0.1795 +0.0456

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 12 +4 +1 +1 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 10 +4 +0 +1 -3 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 13 13 +3 +0 +1 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 2 +0 +1 +0 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 0 +0 +1 -1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1652 0.1657 +0.0198 +0.0236 +0.0256 +0.0283 +0.0004
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1560 0.1560 +0.0167 +0.0197 +0.0208 +0.0236 -0.0001
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1615 0.1613 +0.0158 +0.0189 +0.0205 -0.0002
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1503 0.1500 -0.0030 +0.0091 +0.0124 +0.0144 -0.0003
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1710 0.1703 +0.0005 +0.0064 +0.0088 +0.0104 -0.0007
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1463 0.1471 -0.0033 +0.0104 +0.0134 +0.0148 +0.0008
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1076
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1531 0.1531 +0.0051 +0.0032 +0.0036 +0.0026 -0.0000
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1542
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5939 0.5941 +0.0072 +0.0002
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2052 0.2059 +0.0342 +0.0007

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0844 0.0841 +0.0078 +0.0102 +0.0114 +0.0121 -0.0003
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0805 0.0808 +0.0085 +0.0105 +0.0109 +0.0120 +0.0004
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0751 0.0740 +0.0067 +0.0080 +0.0082 -0.0011
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0648 0.0645 -0.0133 +0.0042 +0.0053 +0.0057 -0.0003
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0800 0.0797 +0.0005 +0.0041 +0.0044 +0.0024 -0.0004
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0636 0.0635 -0.0136 +0.0067 +0.0066 +0.0066 -0.0001
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0985 0.0985 -0.0043 -0.0034 -0.0051 -0.0042 +0.0000
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1017
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5812 0.5809 -0.0072 -0.0003
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1380 0.1383 +0.0150 +0.0002

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 0.0008 0.0021 -0.0020 +0.0070 +0.0012 -0.0769 +0.0014
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0137 -0.0136 -0.0076 +0.0055 -0.0002 -0.0272 -0.0001
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0092 -0.0098 +0.0007 -0.0023 -0.0001 +0.0083 +0.0006
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0754 -0.0764 +0.0012 -0.0008 +0.0020 -0.0514 +0.0010
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0717 -0.0722 -0.0054 -0.0006 -0.0003 -0.0004 +0.0004
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0571 -0.0577 -0.0080 +0.0050 -0.0016 +0.0281 +0.0005
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0453 +0.0114 +0.0329 -0.0052 -0.0508
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1858 +0.0115 +0.0151 +0.0011 -0.0433
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1736 -0.0082 +0.0282 -0.0195 +0.1538
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0286 +0.0067 +0.0305 +0.0014 -0.0136
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3292 +0.0081 +0.0093 -0.0002 -0.0137
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1211 -0.0024 -0.0402 -0.0016 +0.0876
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2195 +0.0015 +0.0038 -0.0038 -0.0083
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2343 +0.0262 -0.0191 +0.0011 +0.0320
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1334 0.1337 -0.0059 -0.0059 +0.0211 -0.1031 +0.0003
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0845 -0.0852 +0.0062 +0.0047 -0.0191 +0.0240 +0.0007
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2000 0.2007 +0.0183 -0.0240 +0.0287 -0.0785 +0.0007
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1045 0.1045 +0.0048 -0.0054 -0.0067 +0.0163 +0.0000
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0482 -0.0481 +0.0009 +0.0001 -0.0089 +0.0026 -0.0001
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2158 0.2159 +0.0051 -0.0017 +0.0004 +0.0122 +0.0001
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1446 0.1478 -0.0032 -0.0062 -0.0160 +0.1222 +0.0032
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0785 -0.0782 +0.0043 -0.0045 -0.0054 -0.0235 -0.0003
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0507 0.0507 +0.0169 -0.0238 +0.0355 -0.0458 +0.0000
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0385 +0.0195 +0.0041 +0.0006 -0.0388
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0065 -0.0031 +0.0125 +0.0006 -0.0615
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0309 -0.0051 -0.0071 +0.0012 +0.0273
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0760 +0.0119 -0.0026 -0.0002 +0.0335
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0867 -0.0238 +0.0049 +0.0003 +0.0249
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0162 -0.0331 +0.0073 +0.0004 -0.0068
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0647 +0.0109 -0.0100 -0.0011 +0.0563
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1548 -0.0356 -0.0145 +0.0024 +0.0961
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1053 -0.0468 -0.0064 -0.0010 +0.0685

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0010 0.0016 +0.0009 +0.0076 -0.0005 -0.0723 +0.0006
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0150 -0.0149 -0.0089 +0.0045 +0.0004 -0.0261 -0.0002
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0001 0.0027 +0.0054 -0.0044 +0.0010 -0.0034 +0.0025
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0770 -0.0741 +0.0013 +0.0005 -0.0055 -0.0436 -0.0029
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0699 -0.0696 -0.0060 -0.0005 -0.0005 -0.0002 -0.0004
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0489 -0.0508 -0.0084 +0.0078 -0.0007 +0.0180 +0.0018
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0544 +0.0142 +0.0365 -0.0057 -0.0359
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1346 +0.0050 +0.0043 -0.0072 -0.0288
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1874 -0.0338 -0.0246 +0.0154 +0.1702
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0229 +0.0064 +0.0290 +0.0021 -0.0296
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3048 +0.0072 +0.0066 -0.0010 -0.0008
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1116 +0.0002 -0.0402 -0.0012 +0.0829
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1028 +0.0124 -0.0135 -0.0021 +0.0517
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1962 -0.0003 +0.0009 -0.0042 +0.0005
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1989 +0.0289 -0.0188 +0.0012 +0.0186
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1590 0.1536 -0.0077 -0.0028 +0.0144 -0.0621 -0.0054
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0790 -0.0800 +0.0048 +0.0016 -0.0170 +0.0233 +0.0010
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2372 0.2354 +0.0504 -0.0481 +0.0073 -0.0282 -0.0018
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0985 0.0988 +0.0031 -0.0032 -0.0081 +0.0226 +0.0003
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0444 -0.0448 +0.0011 -0.0008 -0.0084 +0.0023 +0.0004
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2255 0.2264 +0.0036 -0.0008 +0.0016 +0.0222 +0.0009
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1259 0.1307 +0.0005 -0.0096 -0.0297 +0.1213 +0.0048
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0774 -0.0763 +0.0056 -0.0034 -0.0033 -0.0311 -0.0011
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0658 0.0659 +0.0405 -0.0089 +0.0322 -0.0515 +0.0002
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0464 +0.0258 +0.0029 -0.0003 -0.0236
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0237 -0.0049 +0.0142 +0.0054 -0.0441
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0289 -0.0001 -0.0108 +0.0000 +0.0248
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0809 +0.0137 -0.0048 +0.0001 +0.0402
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0984 -0.0232 +0.0027 +0.0012 +0.0358
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0184 -0.0350 +0.0076 +0.0002 -0.0033
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0658 +0.0131 -0.0109 +0.0003 +0.0542
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1615 -0.0435 -0.0160 +0.0023 +0.1036
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.1007 -0.0508 -0.0078 +0.0009 +0.0564

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1266 0.1307 +0.0343 +0.0202 -0.0086 -0.1812 +0.0041
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1144 0.1151 +0.0169 -0.0058 +0.0004 -0.0955 +0.0007
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1190 0.1196 +0.0117 -0.0078 +0.0011 -0.1419 +0.0006
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1431 0.1438 +0.0441 -0.0007 -0.0136 -0.1549 +0.0007
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1266 0.1265 +0.0164 -0.0031 -0.0002 -0.0926 -0.0001
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1285 0.1291 +0.0170 -0.0063 +0.0017 -0.1395 +0.0007
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1525 +0.0354 +0.0384 -0.0420 -0.4231
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2166 +0.0422 -0.0321 -0.0167 -0.1334
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3611 +0.2175 -0.0279 -0.1166 -0.8801
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1400 +0.0427 +0.0074 -0.0036 -0.1164
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2295 +0.0473 +0.0030 -0.0078 -0.1061
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1770 +0.0549 +0.0262 -0.0056 -0.2031
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1429 +0.0358 +0.0129 -0.0110 -0.1886
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1910 +0.0274 +0.0045 -0.0018 -0.0944
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1946 +0.0778 +0.0001 -0.0169 -0.3438
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.1875 0.1805 +0.0445 +0.0761 -0.1281 -0.3834 -0.0069
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0485 0.0468 -0.0103 +0.0134 -0.0147 -0.1027 -0.0017
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.3018 0.2853 -0.0030 +0.1483 +0.0078 -0.6557 -0.0166
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1851 0.1845 +0.0037 +0.0045 +0.0051 -0.1654 -0.0005
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0430 0.0432 +0.0676 -0.0087 -0.0168 -0.1087 +0.0001
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1860 0.1846 +0.0316 +0.0062 -0.0049 -0.1493 -0.0014
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2052 0.2108 -0.0093 +0.0378 -0.0706 -0.3716 +0.0055
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0596 0.0600 +0.0977 -0.0155 +0.0159 -0.1882 +0.0003
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4715 0.4004 +0.0737 +0.1982 -0.0827 -0.8036 -0.0711
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1056 +0.0321 -0.0450 -0.0051 -0.3770
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1288 +0.0200 -0.0293 -0.0344 -0.4130
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0783 +0.0068 -0.0387 -0.0080 -0.0284
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0871 +0.0190 -0.0584 -0.0028 -0.0649
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0977 +0.0281 -0.0478 -0.0031 -0.0967
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0885 +0.0273 -0.0601 -0.0037 -0.0455
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1008 +0.0130 -0.0614 -0.0008 -0.0842
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1632 +0.0619 -0.0455 -0.0143 -0.4108
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1083 +0.0688 -0.0494 -0.0103 -0.3888

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0570 0.0545 +0.0149 -0.0182 -0.0054 -0.0638 -0.0025
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0350 0.0345 +0.0035 +0.0005 +0.0043 -0.0465 -0.0004
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0396 0.0457 -0.0157 -0.0104 +0.0083 -0.0726 +0.0061
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0483 0.0454 -0.0042 +0.0002 -0.0084 -0.0713 -0.0029
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0383 0.0376 +0.0032 -0.0030 +0.0035 -0.0334 -0.0007
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0521 0.0517 +0.0000 +0.0073 -0.0081 -0.0733 -0.0004
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0444 +0.0402 -0.0136 +0.0467 -0.2213
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0756 +0.0316 -0.0208 -0.0112 -0.0330
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.0864 +0.1306 -0.0136 -0.0647 -0.3064
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0220 +0.0032 +0.0034 -0.0021 -0.0245
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0454 +0.0110 -0.0047 +0.0013 -0.0171
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0271 +0.0055 -0.0000 +0.0038 -0.0350
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0294 +0.0026 +0.0079 -0.0036 -0.0337
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0416 +0.0015 +0.0006 +0.0010 -0.0097
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0363 +0.0296 -0.0022 -0.0025 -0.0845
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0480 0.0521 +0.0146 +0.0452 -0.0355 -0.1797 +0.0042
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0174 0.0176 -0.0057 -0.0062 -0.0031 -0.0312 +0.0002
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0995 0.1043 -0.1294 +0.1626 +0.0090 -0.4010 +0.0048
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0336 0.0334 -0.0046 +0.0074 +0.0016 -0.0355 -0.0002
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0094 0.0091 +0.0109 -0.0066 +0.0090 -0.0340 -0.0003
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0353 0.0360 -0.0053 +0.0093 +0.0025 -0.0471 +0.0006
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0632 0.0694 -0.0166 +0.0170 -0.0166 -0.1543 +0.0062
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0192 0.0197 +0.0068 -0.0006 -0.0039 -0.0545 +0.0005
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1308 0.1617 -0.0891 -0.0032 -0.0082 -0.2996 +0.0309
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0565 +0.0682 -0.0593 -0.0056 -0.1658
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0758 +0.0668 -0.0849 -0.0031 -0.1677
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0332 +0.0113 -0.0357 +0.0198 -0.0196
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0243 -0.0054 -0.0154 +0.0040 -0.0244
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0262 -0.0011 -0.0225 +0.0112 -0.0346
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0243 +0.0094 -0.0181 -0.0013 -0.0214
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0342 -0.0134 -0.0199 -0.0090 -0.0333
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0576 +0.0271 -0.0671 +0.0055 -0.2016
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0403 +0.0501 -0.0498 +0.0220 -0.2351

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 118.1000
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 13.5100 16.9800 -7.0900 -0.3400 -2.8900 -0.1500 +3.4700 -29.4558% -1.9630% -14.5445% -0.8757% +25.6847%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.4300 8.5600 -4.1900 -0.5100 +0.2000 -0.7300 +1.1300 -32.8627% -5.6229% +2.3923% -7.8579% +15.2086%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 7.2800 9.6400 -2.6700 +0.6800 -0.0200 -1.1700 +2.3600 -21.6897% +7.5893% -0.2070% -10.8233% +32.4176%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.7800 4.6600 +0.4300 +0.2500 -0.2800 -0.1200 +10.1655% +5.6689% -5.6680% -2.5105%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 5.4000 5.3100 -0.0700 +0.9300 +0.5600 +0.7700 -0.0900 -1.3011% +21.2329% +11.7895% +16.9604% -1.6667%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.5600 4.5600 -0.8700 +0.4200 +0.1200 -0.1000 +0 -16.0221% +10.1449% +2.7027% -2.1459% +0%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.9700 5 -0.5500 +0.5800 +0.4700 +0.5400 +0.0300 -9.9099% +13.1222% +10.3753% +12.1076% +0.6036%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 48.4900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 16.6200 14.2700 -13.3900 -5.4900 -4.0500 -5.0100 -2.3500 -48.4093% -27.7834% -22.1070% -25.9855% -14.1396%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.8600
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 5.0300 4.6500 -1.1400 +0.0600 +0 +0.5600 -0.3800 -19.6891% +1.3072% +0% +13.6919% -7.5547%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.4200 4.7800 -1.4800 +0.3800 -1.1000 -0.6400 -23.6422% +8.6364% -18.7075% -11.8081%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.5400 5.0800 +0.5600 +1.3500 +0.2800 +1.4400 +0.5400 +12.3894% +36.1930% +5.8333% +39.5604% +11.8943%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 4.2100 3.9900 -1.7500 +0.4800 +0.0700 +0.5500 -0.2200 -30.4878% +13.6752% +1.7857% +15.9884% -5.2257%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.2500 5.9400 -1.1300 +0.4100 +0.4300 +0.2000 +0.6900 -15.9830% +7.4141% +7.8040% +3.4843% +13.1429%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.4100 5.6000 -1.9900 -0.1300 -0.5400 +0.0600 +0.1900 -26.2187% -2.2688% -8.7948% +1.0830% +3.5120%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 5.2600 5.4000 -1.0500 +0.7300 +1.1000 +0.9900 +0.1400 -16.2791% +15.6317% +25.5814% +22.4490% +2.6616%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 5.1400 5.6800 -1.7000 +0.7500 +1.0500 +0.0600 +0.5400 -23.0352% +15.2130% +22.6782% +1.0676% +10.5058%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.7700 4.1900 -0.5500 +0.5300 +0.8000 -0.5800 -11.6034% +14.4809% +23.5988% -12.1593%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.6800 4.4400 -0.8200 +0.6000 +0.6800 -0.2400 -15.5894% +15.6250% +18.0851% -5.1282%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.8300 4.2000 -0.4500 +0.7700 +0.4900 +0.7500 +0.3700 -9.6774% +22.4490% +13.2075% +21.7391% +9.6606%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.6900 4.5900 +0.4200 +1.3000 +0.9000 +1.3200 -0.1000 +10.0719% +39.5137% +24.3902% +40.3670% -2.1322%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.2300 4.2900 -0.9900 +0.7600 +0.6900 +0.8000 +0.0600 -18.7500% +21.5297% +19.1667% +22.9226% +1.4184%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.8700 4.7800 -0.7300 +0.9600 +0.6300 -0.0300 -0.0900 -13.2486% +25.1309% +15.1807% -0.6237% -1.8480%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 5 4.4300 -0.3000 +0.9700 +0.8600 -0.5700 -6.3425% +28.0347% +24.0896% -11.4000%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.5400 4.9600 +0.3100 +1.3400 +1.2300 +1.1800 +0.4200 +6.6667% +37.0166% +32.9759% +31.2169% +9.2511%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.5000 6.8500 -2.1900 +0.3000 +0.7500 -0.6500 -24.2257% +4.5802% +12.2951% -8.6667%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 67.1900
Seer_Astral_single 4.4700 4.1400 5.5800 5.8300 4.3600 -0.1100 +0.2200 -1.2200 -1.4700 -2.4609% +5.3140% -21.8638% -25.2144%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 148
EWZ_2P_MBR_Exploris 26.1800 19.1700 21.3900 -4.7900 +2.2200 -18.2964% +11.5806%
EWZ_2P_MBR_Exploris_Human 12.9100 11.3400 12.2000 -0.7100 +0.8600 -5.4996% +7.5838%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.8500 13.6000 +1.5400 +1.7500 +12.7695% +14.7679%
MacCoss_Eclipse_Normalization_noNorm 27.5100 27.3400 29.2600 +1.7500 +1.9200 +6.3613% +7.0227%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.1700 32.2900 +4.6200 +4.1200 +16.6968% +14.6255%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png