Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1354370 +257876 +47365 +42415 +60829 +60829 +23.5182% +3.6239% +3.2330% +4.7025% +4.7025%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 695183 +108861 +79421 +84473 +95302 +95302 +18.5668% +12.8980% +13.8319% +15.8868% +15.8868%
MTAC_3P_Standard 596590 623022 617574 607435 607435 696225 +99635 +73203 +78651 +88790 +88790 +16.7007% +11.7497% +12.7355% +14.6172% +14.6172%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 162730 +25182 +25891 +27170 +27170 +18.3078% +18.9208% +20.0428% +20.0428%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 181602 +25961 +25051 +25093 +26567 +26758 +16.6801% +16.0018% +16.0329% +17.1361% +17.2806%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 163177 +24668 +23792 +23885 +25292 +25390 +17.8097% +17.0693% +17.1474% +18.3428% +18.4270%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 182353 +23391 +23621 +23193 +24431 +24431 +14.7148% +14.8811% +14.5721% +15.4703% +15.4703%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1349498 +326762 +194829 +225625 +165414 +165414 +31.9498% +16.8731% +20.0757% +13.9698% +13.9698%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 57125 +16243 +15425 +14700 +15025 +15025 +39.7314% +36.9904% +34.6494% +35.6888% +35.6888%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 54996 +13927 +12594 +12973 +13844 +13844 +33.9112% +29.7014% +30.8712% +33.6411% +33.6411%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 46184 +37444 +23069 +23169 +23271 +23271 +428.4211% +99.8010% +100.6691% +101.5624% +101.5624%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31820 +14885 +14267 +13411 +13472 +13472 +87.8949% +81.2796% +72.8502% +73.4249% +73.4249%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 124307 +24399 +21416 +25324 +25659 +25659 +24.4215% +20.8143% +25.5842% +26.0107% +26.0107%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 91069 +19971 +18341 +19624 +19943 +19943 +28.0894% +25.2186% +27.4673% +28.0390% +28.0390%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 133072 +27368 +26575 +27450 +28638 +28560 +25.8912% +24.9538% +25.9889% +27.4221% +27.3270%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 140674 +25517 +23358 +26352 +27593 +27424 +22.1584% +19.9103% +23.0507% +24.4011% +24.2155%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 20738 +10544 +9932 +9500 +9505 +9505 +103.4334% +91.9119% +84.5346% +84.6168% +84.6168%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 21590 +6783 +6157 +5549 +5891 +5891 +45.8094% +39.8950% +34.5926% +37.5247% +37.5247%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 9236 +7975 +7204 +6786 +6850 +6850 +632.4346% +354.5276% +276.9796% +287.0914% +287.0914%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 16747 +15311 +11964 +11057 +11016 +11016 +1066.2256% +250.1359% +194.3234% +192.2178% +192.2178%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 34520 +12810 +12625 +11940 +12057 +12057 +59.0051% +57.6616% +52.8787% +53.6749% +53.6749%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 34972 +9112 +8829 +8712 +9347 +9347 +35.2359% +33.7719% +33.1759% +36.4761% +36.4761%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 21137 +17653 +14239 +14303 +14303 +506.6877% +206.4222% +209.2918% +209.2918%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 30407 +19708 +18933 +17525 +17518 +17518 +184.2041% +165.0078% +136.0425% +135.9143% +135.9143%
SCP_Astral_MBR 92167 93585 91884 90864 90838 117830 +25663 +24245 +25946 +26966 +26992 +27.8440% +25.9069% +28.2378% +29.6773% +29.7144%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61721 +5022 +5928 +5830 +5830 +8.8573% +10.6250% +10.4310% +10.4310%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1952064 +175936 +176718 +9.9056% +9.9540%
EWZ_2P_MBR_Exploris_Human 836809 836809 921441 +84632 +84632 +10.1137% +10.1137%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1026262 +111338 +112313 +12.1691% +12.2888%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2322814 +244780 +244778 +11.7794% +11.7793%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2322814 +244780 +244778 +11.7794% +11.7793%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 153204 +41700 +19585 +21845 +21173 +21173 +37.3978% +14.6573% +16.6300% +16.0364% +16.0364%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 136642 +28375 +19290 +21983 +21826 +21826 +26.2084% +16.4377% +19.1725% +19.0095% +19.0095%
MTAC_3P_Standard 110265 118693 115800 116148 116148 139387 +29122 +20694 +23587 +23239 +23239 +26.4109% +17.4349% +20.3687% +20.0081% +20.0081%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 60010 +11152 +10978 +11015 +11015 +22.8253% +22.3895% +22.4819% +22.4819%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 66761 +12792 +11686 +10921 +10877 +10940 +23.7025% +21.2183% +19.5577% +19.4635% +19.5984%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 60785 +12164 +11120 +10496 +10325 +10370 +25.0180% +22.3900% +20.8714% +20.4618% +20.5693%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66870 +11810 +10951 +10163 +10043 +10043 +21.4493% +19.5837% +17.9219% +17.6729% +17.6729%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75260 +23988 +16476 +20213 +16667 +16695 +46.7858% +28.0280% +36.7195% +28.4454% +28.5068%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21588 +7148 +6630 +6339 +5881 +5881 +49.5014% +44.3241% +41.5699% +37.4419% +37.4419%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20518 +6035 +5453 +5602 +5448 +5446 +41.6695% +36.1965% +37.5570% +36.1513% +36.1332%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18717 +9977 +9341 +9328 +9353 +9332 +114.1533% +99.6267% +99.3503% +99.8825% +99.4353%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17830 +8932 +8571 +8046 +8020 +8020 +100.3821% +92.5694% +82.2363% +81.7533% +81.7533%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 44654 +9789 +8357 +10312 +10229 +10229 +28.0769% +23.0239% +30.0274% +29.7139% +29.7139%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 33025 +8376 +7559 +7906 +7802 +7802 +33.9811% +29.6827% +31.4742% +30.9321% +30.9321%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 48912 +12224 +11236 +11263 +11491 +11453 +33.3188% +29.8227% +29.9158% +30.7074% +30.5748%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50723 +10567 +9178 +10680 +10830 +10777 +26.3149% +22.0917% +26.6713% +27.1476% +26.9789%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8408 +4742 +4459 +4199 +4162 +4162 +129.3508% +112.9147% +99.7624% +98.0217% +98.0217%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8474 +3175 +2863 +2619 +2408 +2407 +59.9170% +51.0248% +44.7310% +39.6967% +39.6736%
SCP_Astral_250pg_3ms 675 721 908 879 879 4384 +3709 +3663 +3476 +3505 +3505 +549.4815% +508.0444% +382.8194% +398.7486% +398.7486%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 7119 +5683 +5381 +4974 +4956 +4954 +395.7521% +309.6087% +231.8881% +229.1262% +228.8222%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13463 +5669 +5491 +5211 +5057 +5055 +72.7354% +68.8786% +63.1483% +60.1594% +60.1213%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 13124 +3966 +3782 +3753 +3710 +3709 +43.3064% +40.4838% +40.0491% +39.4094% +39.3946%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 9202 +7356 +6602 +6616 +6613 +398.4832% +253.9231% +255.8391% +255.4268%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12261 +8387 +8106 +7487 +7456 +7457 +216.4946% +195.0903% +156.8287% +155.1717% +155.2248%
SCP_Astral_MBR 24110 24991 24570 24544 24527 33094 +8984 +8103 +8524 +8550 +8567 +37.2625% +32.4237% +34.6927% +34.8354% +34.9289%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61721 +5022 +5928 +5830 +5830 +8.8573% +10.6250% +10.4310% +10.4310%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64624 +9353 +9477 +16.9221% +17.1850%
EWZ_2P_MBR_Exploris_Human 48465 48473 56107 +7642 +7634 +15.7681% +15.7490%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 60435 +9189 +9258 +17.9312% +18.0902%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80923 +7645 +7646 +10.4329% +10.4344%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80923 +7645 +7646 +10.4329% +10.4344%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92371 +4451 -517 -1611 -1070 -1915 +5.0626% -0.5566% -1.7142% -1.1451% -2.0311%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 69373 +5600 +5399 +5762 +6358 +3538 +8.7811% +8.4394% +9.0582% +10.0897% +5.3740%
MTAC_3P_Standard 64317 64464 64219 63385 65967 69834 +5517 +5370 +5615 +6449 +3867 +8.5778% +8.3302% +8.7435% +10.1743% +5.8620%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13323 +1256 +1353 +1383 +1084 +10.4086% +11.3033% +11.5829% +8.8569%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13489 +1057 +1018 +1127 +1161 +829 +8.5023% +8.1629% +9.1166% +9.4176% +6.5482%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 13037 +1029 +990 +1077 +1069 +857 +8.5693% +8.2178% +9.0050% +8.9322% +7.0361%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13562 +1001 +1097 +1085 +1152 +788 +7.9691% +8.8006% +8.6960% +9.2828% +6.1688%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 160045 +13821 +6511 +6055 +4218 +2759 +9.4519% +4.2408% +3.9321% +2.7068% +1.7541%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12265 +3102 +2737 +2680 +2931 +2243 +33.8535% +28.7259% +27.9604% +31.4013% +22.3808%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 12018 +2720 +2257 +2606 +2465 +2029 +29.2536% +23.1226% +27.6881% +25.8034% +20.3123%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 10360 +7910 +4276 +4113 +4244 +4011 +322.8571% +70.2827% +65.8396% +69.3918% +63.1753%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 7112 +2409 +2524 +2154 +2189 +2163 +51.2226% +55.0131% +43.4449% +44.4648% +43.7058%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18144 +1954 +1864 +2119 +2089 +1608 +12.0692% +11.4496% +13.2231% +13.0115% +9.7242%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15453 +1854 +1612 +1765 +1782 +1469 +13.6334% +11.6466% +12.8945% +13.0349% +10.5049%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18640 +2388 +2364 +2523 +2715 +2182 +14.6936% +14.5245% +15.6543% +17.0487% +13.2580%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19360 +2343 +2182 +2447 +2615 +2011 +13.7686% +12.7023% +14.4682% +15.6166% +11.5914%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 6162 +2515 +2249 +2298 +2623 +2348 +68.9608% +57.4751% +59.4720% +74.1170% +61.5627%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6333 +2033 +1730 +1536 +1356 +1164 +47.2791% +37.5842% +32.0200% +27.2453% +22.5189%
SCP_Astral_250pg_3ms 576 22 936 741 736 2659 +2083 +2637 +1723 +1918 +1923 +361.6319% +11986.3636% +184.0812% +258.8394% +261.2772%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 5014 +4377 +2934 +2985 +2968 +2946 +687.1272% +141.0577% +147.1168% +145.0635% +142.4565%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8634 +2389 +2288 +2618 +2507 +2415 +38.2546% +36.0542% +43.5173% +40.9173% +38.8326%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8410 +1688 +1681 +1398 +1387 +1068 +25.1116% +24.9814% +19.9373% +19.7494% +14.5464%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5770 +4788 +3405 +3593 +3534 +487.5764% +143.9746% +165.0436% +158.0501%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7865 +4157 +3858 +3820 +3947 +3762 +112.1090% +96.2815% +94.4376% +100.7402% +91.6890%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21676 +1511 +1547 +1602 +1883 +1778 +7.4932% +7.6854% +7.9805% +9.5135% +8.9356%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5145 +460 +445 +513 +406 +9.8186% +9.4681% +11.0751% +8.5672%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 255665 +10406 +8243 +4.2429% +3.3316%
EWZ_2P_MBR_Exploris_Human 115447 117345 118871 +3424 +1526 +2.9659% +1.3004%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 136191 +7223 +5485 +5.6006% +4.1964%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 192882 +14708 +9339 +8.2549% +5.0882%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 192882 +14708 +9339 +8.2549% +5.0882%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8518 +673 +343 +363 +315 +269 +8.5787% +4.1957% +4.4513% +3.8401% +3.2610%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12736 +1375 +1242 +1385 +1398 +938 +12.1028% +10.8056% +12.2016% +12.3302% +7.9505%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12875 +1402 +1315 +1398 +1479 +1043 +12.2200% +11.3754% +12.1809% +12.9782% +8.8151%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4595 +467 +503 +495 +412 +11.3130% +12.2923% +12.0732% +9.8494%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4622 +407 +374 +404 +408 +285 +9.6560% +8.8041% +9.5780% +9.6820% +6.5714%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4475 +400 +341 +385 +378 +290 +9.8160% +8.2487% +9.4132% +9.2263% +6.9295%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4650 +401 +413 +406 +419 +296 +9.4375% +9.7475% +9.5664% +9.9031% +6.7983%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8205 +950 +623 +865 +726 +668 +13.0944% +8.2168% +11.7847% +9.7072% +8.8629%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4429 +1184 +1040 +1018 +1111 +868 +36.4869% +30.6875% +29.8446% +33.4840% +24.3752%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4296 +1042 +863 +1005 +862 +804 +32.0221% +25.1384% +30.5378% +25.1019% +23.0241%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3878 +1428 +1482 +1428 +1481 +1444 +58.2857% +61.8531% +58.2857% +61.7856% +59.3262%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3800 +1292 +1364 +1166 +1158 +1217 +51.5152% +55.9934% +44.2673% +43.8304% +47.1158%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6306 +727 +650 +802 +760 +652 +13.0310% +11.4922% +14.5712% +13.7036% +11.5317%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5446 +725 +608 +663 +635 +602 +15.3569% +12.5672% +13.8616% +13.1989% +12.4277%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6554 +943 +899 +958 +1001 +841 +16.8063% +15.8974% +17.1194% +18.0263% +14.7208%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6762 +916 +813 +919 +957 +797 +15.6688% +13.6662% +15.7282% +16.4858% +13.3613%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2342 +1050 +918 +936 +1054 +983 +81.2693% +64.4663% +66.5718% +81.8323% +72.3326%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2343 +775 +683 +585 +470 +473 +49.4260% +41.1446% +33.2765% +25.0934% +25.2941%
SCP_Astral_250pg_3ms 307 8 350 283 281 1088 +781 +1080 +738 +805 +807 +254.3974% +13500% +210.8571% +284.4523% +287.1886%
SCP_Astral_250pg_6ms 637 756 751 766 767 1911 +1274 +1155 +1160 +1145 +1144 +200% +152.7778% +154.4607% +149.4778% +149.1525%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3176 +969 +901 +1007 +946 +959 +43.9058% +39.6044% +46.4269% +42.4215% +43.2567%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3056 +653 +668 +579 +517 +458 +27.1744% +27.9732% +23.3751% +20.3623% +17.6289%
SCP_Astral_500pg_3ms 525 902 828 835 2252 +1727 +1350 +1424 +1417 +328.9524% +149.6674% +171.9807% +169.7006%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2930 +1612 +1483 +1444 +1495 +1462 +122.3065% +102.4879% +97.1736% +104.1812% +99.5913%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5325 +617 +605 +613 +610 +609 +13.1054% +12.8178% +13.0093% +12.9374% +12.9135%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5145 +460 +445 +513 +406 +9.8186% +9.4681% +11.0751% +8.5672%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7602 +561 +496 +7.9676% +6.9800%
EWZ_2P_MBR_Exploris_Human 6167 6284 6466 +299 +182 +4.8484% +2.8962%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7505 +618 +542 +8.9734% +7.7840%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6355 +551 +400 +9.4935% +6.7170%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6355 +551 +400 +9.4935% +6.7170%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92347 -1932
MTAC_3P_Alternating 65832 69363 +3531
MTAC_3P_Standard 65967 69825 +3858
MTAC_Yeast_Alternating_3min 12239 13318 +1079
MTAC_Yeast_Alternating_5min 12660 13487 +827
MTAC_Yeast_Standard_3min 12180 13035 +855
MTAC_Yeast_Standard_5min 12772 13561 +789
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 160038 +2753
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12263 +2241
SCP_Astral_1000pg_24ms 9989 12018 +2029
SCP_Astral_1000pg_3ms 6349 10355 +4006
SCP_Astral_1000pg_6ms 4949 7108 +2159
SCP_Astral_10ng_12ms 16536 18144 +1608
SCP_Astral_10ng_24ms 13982 15453 +1471
SCP_Astral_10ng_3ms 16458 18635 +2177
SCP_Astral_10ng_6ms 17349 19358 +2009
SCP_Astral_250pg_12ms 3814 6162 +2348
SCP_Astral_250pg_24ms 5169 6333 +1164
SCP_Astral_250pg_3ms 736 2659 +1923
SCP_Astral_250pg_6ms 2066 5014 +2948
SCP_Astral_500pg_12ms 6219 8631 +2412
SCP_Astral_500pg_24ms 7342 8410 +1068
SCP_Astral_500pg_3ms 2234 5770 +3536
SCP_Astral_500pg_6ms 4103 7864 +3761
SCP_Astral_MBR 19891 21676 +1785
Seer_Astral_45 242898
Seer_Astral_single 4739 5145 +406
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 255640 +8218
EWZ_2P_MBR_Exploris_Human 117340 118854 +1514
EWZ_2P_MBR_Exploris_YeastHuman 130702 136179 +5477
MacCoss_Eclipse_Normalization_noNorm 183540 192877 +9337
MacCoss_Eclipse_Normalization_yesNorm 183540 192877 +9337

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0007 +0.0004 +0.0004
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0001 +0.0005 +0.0005
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 0.0004 +0.0009 +0.0005 +0.0014 +0.0012 +0.0012
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 0.0001 +0.0015 -0.0003 +0.0007 +0.0009 +0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0005 +0.0020 +0.0024 +0.0031 +0.0031
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0010 +0.0014 +0.0022 +0.0024 +0.0024 +0.0024
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 0.0005 +0.0024 +0.0019 +0.0017 +0.0025 +0.0025
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0017 +0.0027 +0.0036 +0.0041 +0.0042
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0004 -0.0002 -0.0002
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0008 +0.0009 +0.0005 +0.0019 +0.0003 +0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0011 +0.0034 +0.0041 +0.0032
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0028 +0.0082 +0.0061 +0.0059 +0.0074 +0.0074
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0007 +0.0037 +0.0055 +0.0036 +0.0045 +0.0053
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0013 +0.0015 +0.0024 +0.0049 +0.0039 +0.0039
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0011 +0.0033 +0.0027 +0.0035 +0.0035
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0011 +0.0031 +0.0002 +0.0026 +0.0024 +0.0024
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0015 +0.0039 +0.0042 +0.0033 +0.0033 +0.0033
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0007 +0.0015 +0.0006 +0.0028 +0.0019 +0.0019
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0004 +0.0034 +0.0036 -0.0007 +0.0048 +0.0048
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0016 +0.0018 +0.0027 +0.0039 +0.0047 +0.0047
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0069 +0.0138 +0.0069 +0.0069
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0020 +0.0070 +0.0046 +0.0069 +0.0064
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0013 +0.0035 +0.0023 +0.0041 +0.0039 +0.0039
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0013 +0.0025 +0.0037 +0.0025 +0.0024 +0.0024
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0039 +0.0052 +0.0062 +0.0074 +0.0074
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0042 +0.0073 +0.0075 +0.0057 +0.0057
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0008 +0.0034 +0.0027 +0.0022 +0.0030 +0.0030
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0004 +0.0026 +0.0026
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0018 +0.0008 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0014 +0.0015 -0.0000
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0012 -0.0002 -0.0001 -0.0017 -0.0019 -0.0001
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0010 +0.0003 +0.0015 +0.0019 +0.0016 +0.0034
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 0.0002 +0.0068 +0.0055 +0.0050 +0.0046
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0022 +0.0064 +0.0061 +0.0071 +0.0056 +0.0079
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0011 +0.0047 +0.0036 +0.0008 +0.0016 +0.0013
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0016 +0.0052 +0.0061 +0.0071 +0.0070
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0025 -0.0022 +0.0006
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0020 +0.0009 -0.0019 +0.0008 -0.0011 -0.0003
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 0.0005 +0.0054 +0.0047 +0.0048 +0.0046
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0021 +0.0091 +0.0080 +0.0092 +0.0092 +0.0105
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0000 +0.0059 +0.0059 +0.0072 +0.0072 +0.0087
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0006 +0.0023 +0.0055 +0.0049 +0.0051 +0.0052
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0017 +0.0038 +0.0023 +0.0037 +0.0044
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0008 +0.0024 +0.0015 +0.0008 +0.0037 +0.0028
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0013 +0.0024 +0.0060 +0.0054 +0.0048 +0.0048
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 0.0008 +0.0062 +0.0028 +0.0062 +0.0054 +0.0057
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0011 +0.0042 +0.0066 +0.0023 +0.0053 +0.0050
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0016 +0.0026 +0.0026 +0.0010 -0.0003 +0.0027
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0064 +0.0092 +0.0064 +0.0150 +0.0064 +0.0064
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0102 +0.0201 +0.0169 +0.0186 +0.0190 +0.0190
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0025 +0.0061 +0.0065 +0.0011 +0.0045 +0.0049
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0053 -0.0033 -0.0052 -0.0002 +0.0008 +0.0007
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0015 +0.0026 -0.0086 -0.0035 -0.0014 -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0008 +0.0053 +0.0053 +0.0016 +0.0064 +0.0051
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0010 +0.0049 +0.0020 +0.0015 +0.0040 +0.0046
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0024 +0.0098 +0.0097
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0003 +0.0010 +0.0010
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0003 +0.0006 +0.0006
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0005 +0.0006 +0.0002 +0.0007 +0.0006 +0.0006
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0002 +0.0011 +0.0000 +0.0006 +0.0005 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0003 +0.0013 +0.0016 +0.0017 +0.0017
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0008 +0.0012 +0.0015 +0.0018 +0.0016 +0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0003 +0.0011 +0.0010 +0.0011 +0.0013 +0.0013
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0012 +0.0020 +0.0022 +0.0026 +0.0026
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0009 +0.0006 +0.0006
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0011 +0.0015 +0.0006 +0.0017 +0.0011 +0.0011
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0011 +0.0026 +0.0041 +0.0030
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0017 +0.0063 +0.0045 +0.0048 +0.0054 +0.0054
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0007 +0.0027 +0.0037 +0.0033 +0.0033 +0.0041
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0014 +0.0012 +0.0020 +0.0041 +0.0038 +0.0038
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0009 +0.0025 +0.0018 +0.0024 +0.0024
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0011 +0.0024 +0.0007 +0.0023 +0.0019 +0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0011 +0.0031 +0.0032 +0.0027 +0.0026 +0.0026
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0006 +0.0011 +0.0004 +0.0018 +0.0015 +0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0002 +0.0032 +0.0029 +0.0005 +0.0033 +0.0033
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0009 +0.0016 +0.0018 +0.0023 +0.0023 +0.0023
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0058 +0.0118 +0.0058 +0.0058
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0031 +0.0068 +0.0052 +0.0061 +0.0061
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0007 +0.0025 +0.0010 +0.0027 +0.0020 +0.0020
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0017 +0.0033 +0.0034 +0.0035 +0.0033 +0.0033
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0037 +0.0019 +0.0041 +0.0053 +0.0053
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0032 +0.0058 +0.0051 +0.0042 +0.0042
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0016 +0.0033 +0.0031 +0.0024 +0.0029 +0.0029
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0004 +0.0026 +0.0026
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 -0.0006 +0.0005 +0.0007
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0010 +0.0006 -0.0004
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0008 -0.0007 -0.0006 -0.0011 -0.0011 -0.0003
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0002 +0.0006 +0.0012 +0.0019 +0.0016 +0.0022
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0005 +0.0042 +0.0039 +0.0035 +0.0027
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0029 +0.0066 +0.0050 +0.0054 +0.0042 +0.0054
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0005 +0.0033 +0.0030 +0.0009 +0.0011 +0.0014
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0017 +0.0040 +0.0044 +0.0054 +0.0051
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0005 -0.0001 +0.0015
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0013 +0.0013 -0.0020 +0.0004 +0.0003 +0.0006
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 0.0006 +0.0043 +0.0029 +0.0039 +0.0046
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0008 +0.0056 +0.0063 +0.0066 +0.0051 +0.0068
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0009 +0.0035 +0.0024 +0.0032 +0.0022 +0.0055
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0008 +0.0033 +0.0043 +0.0048 +0.0048 +0.0041
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0016 +0.0032 +0.0015 +0.0026 +0.0028
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0010 +0.0022 +0.0004 +0.0005 +0.0016 +0.0021
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0006 +0.0015 +0.0040 +0.0032 +0.0027 +0.0034
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0007 +0.0032 +0.0012 +0.0031 +0.0022 +0.0026
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0000 +0.0039 +0.0041 +0.0019 +0.0030 +0.0044
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0000 +0.0013 +0.0032 +0.0003 +0.0001 +0.0029
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0101 +0.0161 +0.0182 +0.0147 +0.0101 +0.0101
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0074 +0.0174 +0.0142 +0.0129 +0.0121 +0.0122
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0028 +0.0067 +0.0063 +0.0035 +0.0055 +0.0050
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0042 -0.0022 -0.0042 +0.0002 +0.0003 +0.0026
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 -0.0004 +0.0028 -0.0071 -0.0032 -0.0007 -0.0007
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0005 +0.0024 +0.0027 -0.0005 +0.0033 +0.0023
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0001 +0.0023 +0.0016 +0.0021 +0.0027 +0.0040
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0022 +0.0097 +0.0091
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 4361 -20034 -20227

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 126 -645 -636

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0289 -0.0027 -0.0021

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 603 -241 +1232

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -35 -225 -91

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1731 +0.0272 +0.0310 +0.0331 +0.0358 +0.0356
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1637 +0.0244 +0.0274 +0.0285 +0.0313 +0.0312
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1738 +0.0283 +0.0314 +0.0330 +0.0329
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1598 +0.0067 +0.0188 +0.0222 +0.0242 +0.0243
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1804 +0.0107 +0.0165 +0.0189 +0.0205 +0.0207
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1552 +0.0049 +0.0186 +0.0215 +0.0230 +0.0229
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1545 +0.0065 +0.0046 +0.0050 +0.0041 +0.0040
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5966 +0.0097 +0.0096
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2144 +0.0427 +0.0426

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0860 +0.0097 +0.0121 +0.0133 +0.0140 +0.0103
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0824 +0.0101 +0.0121 +0.0125 +0.0136 +0.0106
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0794 +0.0121 +0.0134 +0.0136 +0.0107
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0675 -0.0103 +0.0072 +0.0082 +0.0087 +0.0074
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0826 +0.0034 +0.0070 +0.0073 +0.0054 +0.0051
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0645 -0.0126 +0.0077 +0.0076 +0.0076 +0.0061
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1014 -0.0014 -0.0005 -0.0022 -0.0013 -0.0019
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5787 -0.0094 -0.0093
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1387 +0.0154 +0.0140

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0147 -0.0020 +0.0070 +0.0012 +0.0000 -0.0630
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0043 -0.0076 +0.0055 -0.0002 -0.0001 -0.0364
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0011 +0.0007 -0.0023 -0.0001 -0.0000 +0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0595 +0.0012 -0.0008 +0.0020 -0.0002 -0.0672
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0608 -0.0054 -0.0006 -0.0003 +0.0001 -0.0116
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0532 -0.0080 +0.0050 -0.0016 -0.0001 +0.0243
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1262 -0.0059 -0.0059 +0.0211 -0.0012 -0.1090
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0810 +0.0062 +0.0047 -0.0191 -0.0001 +0.0206
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1900 +0.0183 -0.0240 +0.0287 +0.0020 -0.0905
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1049 +0.0048 -0.0054 -0.0067 +0.0002 +0.0164
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0466 +0.0009 +0.0001 -0.0089 -0.0000 +0.0010
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2071 +0.0051 -0.0017 +0.0004 +0.0004 +0.0031
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1335 -0.0032 -0.0062 -0.0160 +0.0006 +0.1103
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0804 +0.0043 -0.0045 -0.0054 -0.0001 -0.0215
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0499 +0.0169 -0.0238 +0.0355 +0 -0.0466
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0176 +0.0009 +0.0076 -0.0005 +0.0006 -0.0563
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0034 -0.0089 +0.0045 +0.0004 +0.0011 -0.0388
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0155 +0.0054 -0.0044 +0.0010 +0.0033 +0.0086
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0684 +0.0013 +0.0005 -0.0055 +0.0004 -0.0527
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0603 -0.0060 -0.0005 -0.0005 -0.0005 -0.0093
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0440 -0.0084 +0.0078 -0.0007 +0.0020 +0.0109
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1611 -0.0077 -0.0028 +0.0144 -0.0004 -0.0596
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0779 +0.0048 +0.0016 -0.0170 -0.0057 +0.0280
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2398 +0.0504 -0.0481 +0.0073 +0.0089 -0.0345
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1041 +0.0031 -0.0032 -0.0081 +0.0006 +0.0276
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0443 +0.0011 -0.0008 -0.0084 -0.0000 +0.0023
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2172 +0.0036 -0.0008 +0.0016 +0.0018 +0.0121
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1110 +0.0005 -0.0096 -0.0297 +0.0070 +0.0994
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0808 +0.0056 -0.0034 -0.0033 +0.0038 -0.0315
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0560 +0.0405 -0.0089 +0.0322 +0.0276 -0.0889
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1457 +0.0343 +0.0202 -0.0086 +0.0005 -0.1627
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1289 +0.0169 -0.0058 +0.0004 +0.0004 -0.0813
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1356 +0.0117 -0.0078 +0.0011 -0.0001 -0.1251
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1396 +0.0441 -0.0007 -0.0136 +0.0007 -0.1590
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1326 +0.0164 -0.0031 -0.0002 +0.0007 -0.0874
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1344 +0.0170 -0.0063 +0.0017 +0.0006 -0.1342
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2143 +0.0445 +0.0761 -0.1281 +0.0017 -0.3583
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0432 -0.0103 +0.0134 -0.0147 -0.0018 -0.1062
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3458 -0.0030 +0.1483 +0.0078 -0.0120 -0.5997
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1886 +0.0037 +0.0045 +0.0051 +0.0002 -0.1621
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0438 +0.0676 -0.0087 -0.0168 +0.0006 -0.1085
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1855 +0.0316 +0.0062 -0.0049 +0.0001 -0.1499
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2254 -0.0093 +0.0378 -0.0706 +0.0033 -0.3546
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0630 +0.0977 -0.0155 +0.0159 +0.0001 -0.1849
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5655 +0.0737 +0.1982 -0.0827 -0.0008 -0.7089
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0671 +0.0149 -0.0182 -0.0054 +0.1015 -0.1552
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0383 +0.0035 +0.0005 +0.0043 +0.0189 -0.0620
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0565 -0.0157 -0.0104 +0.0083 +0.0352 -0.0909
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0505 -0.0042 +0.0002 -0.0084 +0.0711 -0.1402
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0371 +0.0032 -0.0030 +0.0035 +0.0313 -0.0658
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0557 +0.0000 +0.0073 -0.0081 +0.0305 -0.1002
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0492 +0.0146 +0.0452 -0.0355 +0.0761 -0.2546
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0173 -0.0057 -0.0062 -0.0031 +0.0154 -0.0467
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0693 -0.1294 +0.1626 +0.0090 +0.0813 -0.5125
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0312 -0.0046 +0.0074 +0.0016 +0.0039 -0.0418
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0099 +0.0109 -0.0066 +0.0090 -0.0065 -0.0269
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0366 -0.0053 +0.0093 +0.0025 +0.0083 -0.0540
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0650 -0.0166 +0.0170 -0.0166 +0.0315 -0.1840
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0213 +0.0068 -0.0006 -0.0039 +0.0560 -0.1085
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1256 -0.0891 -0.0032 -0.0082 +0.0618 -0.3667
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 18.7700 -5.3000 +1.4500 -1.1000 +1.6400 -0.2600 -22.0191% +8.3718% -5.5360% +9.5738% -1.3663%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10.0600 -2.6900 +0.9900 +1.7000 +0.7700 +1.9300 -21.0980% +10.9151% +20.3349% +8.2885% +23.7392%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.6500 -2.6600 +0.6900 -0.0100 -1.1600 -0.1400 -21.6084% +7.7009% -0.1035% -10.7308% -1.4300%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.8900 +0.6600 +0.4800 -0.0500 +0.6100 +15.6028% +10.8844% -1.0121% +14.2523%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.3700 -0.0100 +0.9900 +0.6200 +0.8300 +0.8100 -0.1859% +22.6027% +13.0526% +18.2819% +17.7632%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.8200 -0.6100 +0.6800 +0.3800 +0.1600 +0.5800 -11.2339% +16.4251% +8.5586% +3.4335% +13.6792%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.9000 -0.6500 +0.4800 +0.3700 +0.4400 +0.3600 -11.7117% +10.8597% +8.1678% +9.8655% +7.9295%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 17.2300 -10.4300 -2.5300 -1.0900 -2.0500 -0.6700 -37.7079% -12.8036% -5.9498% -10.6328% -3.7430%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.8300 -0.9600 +0.2400 +0.1800 +0.7400 +0.4700 -16.5803% +5.2288% +3.8710% +18.0929% +10.7798%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.0600 -1.2000 +0.6600 -0.8200 +0.0500 -19.1693% +15.0000% -13.9456% +0.9980%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.0700 +0.5500 +1.3400 +0.2700 +1.4300 +1.2400 +12.1681% +35.9249% +5.6250% +39.2857% +32.3760%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.4400 -1.3000 +0.9300 +0.5200 +1.0000 +0.7200 -22.6481% +26.4957% +13.2653% +29.0698% +19.3548%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 7.4700 +0.4000 +1.9400 +1.9600 +1.7300 +2 +5.6577% +35.0814% +35.5717% +30.1394% +36.5631%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.8200 -0.7700 +1.0900 +0.6800 +1.2800 +0.9300 -10.1449% +19.0227% +11.0749% +23.1047% +15.7895%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.4800 -0.9700 +0.8100 +1.1800 +1.0700 +1.0600 -15.0388% +17.3448% +27.4419% +24.2630% +23.9819%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.7100 -0.6700 +1.7800 +2.0800 +1.0900 +1.7500 -9.0786% +36.1055% +44.9244% +19.3950% +35.2823%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.6800 -0.0600 +1.0200 +1.2900 +1.0900 -1.2658% +27.8689% +38.0531% +30.3621%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.7900 -0.4700 +0.9500 +1.0300 +0.7300 -8.9354% +24.7396% +27.3936% +17.9803%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.2200 -0.4300 +0.7900 +0.5100 +0.7700 +0.6700 -9.2473% +23.0321% +13.7466% +22.3188% +18.8732%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.5100 +0.3400 +1.2200 +0.8200 +1.2400 +0.9900 +8.1535% +37.0821% +22.2222% +37.9205% +28.1250%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.7900 -0.4900 +1.2600 +1.1900 +1.3000 +1.0900 -9.2803% +35.6941% +33.0556% +37.2493% +29.4595%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.8300 +0.3200 +2.0100 +1.6800 +1.0200 +1.8000 +5.8076% +52.6178% +40.4819% +21.2058% +44.6650%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.6500 -0.0800 +1.1900 +1.0800 +0.8800 -1.6913% +34.3931% +30.2521% +23.3422%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.8500 +0.2000 +1.2300 +1.1200 +1.0700 +1.3500 +4.3011% +33.9779% +30.0268% +28.3069% +38.5714%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 8.4300 -0.6100 +1.8800 +2.3300 +1.2200 -6.7478% +28.7023% +38.1967% +16.9209%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.9000 +0.4300 +0.7600 -0.6800 -0.3200 +9.6197% +18.3575% -12.1864% -6.1303%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 29.2200 +3.0400 +4.9400 +11.6119% +20.3460%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.9100 +0 +0.4900 +0% +3.9452%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 14.1000 +2.0400 -0.3100 +16.9154% -2.1513%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 36.5600 +9.0500 +8.2800 +32.8971% +29.2786%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 46.9500 +19.2800 +18.4500 +69.6784% +64.7368%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png