Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1442886 +346392 +135881 +130931 +149345 +149345 +31.5909% +10.3964% +9.9798% +11.5454% +11.5454%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 737538 +151216 +121776 +126828 +137657 +137657 +25.7906% +19.7765% +20.7673% +22.9474% +22.9474%
MTAC_3P_Standard 596590 623022 617574 607435 607435 740063 +143473 +117041 +122489 +132628 +132628 +24.0488% +18.7860% +19.8339% +21.8341% +21.8341%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 166990 +29442 +30151 +31430 +31430 +21.4049% +22.0339% +23.1853% +23.1853%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 186668 +31027 +30117 +30159 +31633 +31824 +19.9350% +19.2378% +19.2698% +20.4038% +20.5523%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 168682 +30173 +29297 +29390 +30797 +30895 +21.7841% +21.0188% +21.0996% +22.3353% +22.4223%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 188415 +29453 +29683 +29255 +30493 +30493 +18.5283% +18.7001% +18.3809% +19.3089% +19.3089%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1398269 +375533 +243600 +274396 +214185 +214185 +36.7185% +21.0970% +24.4152% +18.0887% +18.0887%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 59229 +18347 +17529 +16804 +17129 +17129 +44.8779% +42.0360% +39.6087% +40.6865% +40.6865%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 56816 +15747 +14414 +14793 +15664 +15664 +38.3428% +33.9937% +35.2022% +38.0638% +38.0638%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 48108 +39368 +24993 +25093 +25195 +25195 +450.4348% +108.1246% +109.0289% +109.9594% +109.9594%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 32512 +15577 +14959 +14103 +14164 +14164 +91.9811% +85.2219% +76.6093% +77.1964% +77.1964%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 127444 +27536 +24553 +28461 +28796 +28796 +27.5614% +23.8631% +28.7534% +29.1907% +29.1907%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 94164 +23066 +21436 +22719 +23038 +23038 +32.4425% +29.4742% +31.7993% +32.3904% +32.3904%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 136842 +31138 +30345 +31220 +32408 +32330 +29.4577% +28.4938% +29.5582% +31.0320% +30.9342%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 143536 +28379 +26220 +29214 +30455 +30286 +24.6437% +22.3499% +25.5541% +26.9320% +26.7426%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 21968 +11774 +11162 +10730 +10735 +10735 +115.4993% +103.2945% +95.4796% +95.5666% +95.5666%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 22798 +7991 +7365 +6757 +7099 +7099 +53.9677% +47.7224% +42.1233% +45.2194% +45.2194%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 10011 +8750 +7979 +7561 +7625 +7625 +693.8937% +392.6673% +308.6122% +319.5725% +319.5725%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 17835 +16399 +13052 +12145 +12104 +12104 +1141.9916% +272.8831% +213.4446% +211.2022% +211.2022%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 35457 +13747 +13562 +12877 +12994 +12994 +63.3211% +61.9411% +57.0283% +57.8462% +57.8462%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 35655 +9795 +9512 +9395 +10030 +10030 +37.8770% +36.3845% +35.7768% +39.1415% +39.1415%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 22332 +18848 +15434 +15498 +15498 +540.9874% +223.7460% +226.7779% +226.7779%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 31756 +21057 +20282 +18874 +18867 +18867 +196.8128% +176.7649% +146.5145% +146.3806% +146.3806%
SCP_Astral_MBR 92167 93585 91884 90864 90838 123804 +31637 +30219 +31920 +32940 +32966 +34.3257% +32.2904% +34.7395% +36.2520% +36.2910%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 2019608 +243480 +244262 +13.7085% +13.7586%
EWZ_2P_MBR_Exploris_Human 836809 836809 944013 +107204 +107204 +12.8110% +12.8110%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1054888 +139964 +140939 +15.2979% +15.4209%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2429105 +351071 +351069 +16.8944% +16.8943%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2429105 +351071 +351069 +16.8944% +16.8943%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 151447 +39943 +17828 +20088 +19416 +19416 +35.8220% +13.3424% +15.2924% +14.7056% +14.7056%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 136093 +27826 +18741 +21434 +21277 +21277 +25.7013% +15.9699% +18.6937% +18.5314% +18.5314%
MTAC_3P_Standard 110265 118693 115800 116148 116148 137627 +27362 +18934 +21827 +21479 +21479 +24.8148% +15.9521% +18.8489% +18.4928% +18.4928%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 59649 +10791 +10617 +10654 +10654 +22.0865% +21.6532% +21.7451% +21.7451%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 66429 +12460 +11354 +10589 +10545 +10608 +23.0873% +20.6155% +18.9631% +18.8694% +19.0036%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 60397 +11776 +10732 +10108 +9937 +9982 +24.2200% +21.6088% +20.0998% +19.6928% +19.7997%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66587 +11527 +10668 +9880 +9760 +9760 +20.9353% +19.0776% +17.4229% +17.1749% +17.1749%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 72927 +21655 +14143 +17880 +14334 +14362 +42.2355% +24.0593% +32.4813% +24.4637% +24.5232%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21618 +7178 +6660 +6369 +5911 +5911 +49.7091% +44.5247% +41.7667% +37.6329% +37.6329%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20424 +5941 +5359 +5508 +5354 +5352 +41.0205% +35.5725% +36.9268% +35.5275% +35.5096%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18685 +9945 +9309 +9296 +9321 +9300 +113.7872% +99.2854% +99.0095% +99.5408% +99.0943%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17648 +8750 +8389 +7864 +7838 +7838 +98.3367% +90.6037% +80.3761% +79.8981% +79.8981%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 44604 +9739 +8307 +10262 +10179 +10179 +27.9335% +22.8862% +29.8818% +29.5686% +29.5686%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 33291 +8642 +7825 +8172 +8068 +8068 +35.0602% +30.7272% +32.5331% +31.9867% +31.9867%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 48943 +12255 +11267 +11294 +11522 +11484 +33.4033% +29.9050% +29.9981% +30.7902% +30.6575%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50519 +10363 +8974 +10476 +10626 +10573 +25.8069% +21.6007% +26.1619% +26.6363% +26.4682%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8431 +4765 +4482 +4222 +4185 +4185 +129.9782% +113.4971% +100.3089% +98.5634% +98.5634%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8565 +3266 +2954 +2710 +2499 +2498 +61.6343% +52.6466% +46.2852% +41.1968% +41.1736%
SCP_Astral_250pg_3ms 675 721 908 879 879 4616 +3941 +3895 +3708 +3737 +3737 +583.8519% +540.2219% +408.3700% +425.1422% +425.1422%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 7138 +5702 +5400 +4993 +4975 +4973 +397.0752% +310.7020% +232.7739% +230.0046% +229.6998%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13460 +5666 +5488 +5208 +5054 +5052 +72.6969% +68.8409% +63.1120% +60.1237% +60.0856%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 13019 +3861 +3677 +3648 +3605 +3604 +42.1599% +39.3599% +38.9286% +38.2940% +38.2793%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 9374 +7528 +6774 +6788 +6785 +407.8007% +260.5385% +262.4903% +262.0703%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12088 +8214 +7933 +7314 +7283 +7284 +212.0289% +190.9266% +153.2049% +151.5713% +151.6236%
SCP_Astral_MBR 24110 24991 24570 24544 24527 32930 +8820 +7939 +8360 +8386 +8403 +36.5823% +31.7674% +34.0252% +34.1672% +34.2602%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 62519 +7248 +7372 +13.1136% +13.3679%
EWZ_2P_MBR_Exploris_Human 48465 48473 54384 +5919 +5911 +12.2129% +12.1944%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 58602 +7356 +7425 +14.3543% +14.5085%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80214 +6936 +6937 +9.4653% +9.4668%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80214 +6936 +6937 +9.4653% +9.4668%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 97101 +9181 +4213 +3119 +3660 +2815 +10.4424% +4.5356% +3.3187% +3.9169% +2.9856%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 71935 +8162 +7961 +8324 +8920 +6100 +12.7985% +12.4441% +13.0858% +14.1554% +9.2656%
MTAC_3P_Standard 64317 64464 64219 63385 65967 71989 +7672 +7525 +7770 +8604 +6022 +11.9284% +11.6732% +12.0992% +13.5742% +9.1288%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13308 +1241 +1338 +1368 +1069 +10.2842% +11.1779% +11.4573% +8.7344%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13508 +1076 +1037 +1146 +1180 +848 +8.6551% +8.3153% +9.2703% +9.5717% +6.6983%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 13183 +1175 +1136 +1223 +1215 +1003 +9.7851% +9.4297% +10.2258% +10.1521% +8.2348%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13595 +1034 +1130 +1118 +1185 +821 +8.2318% +9.0654% +8.9605% +9.5488% +6.4271%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 168666 +22442 +15132 +14676 +12839 +11380 +15.3477% +9.8558% +9.5305% +8.2393% +7.2352%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12405 +3242 +2877 +2820 +3071 +2383 +35.3814% +30.1952% +29.4210% +32.9012% +23.7777%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 12078 +2780 +2317 +2666 +2525 +2089 +29.8989% +23.7373% +28.3255% +26.4315% +20.9130%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 10615 +8165 +4531 +4368 +4499 +4266 +333.2653% +74.4740% +69.9216% +73.5612% +67.1917%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 7224 +2521 +2636 +2266 +2301 +2275 +53.6041% +57.4542% +45.7039% +46.7398% +45.9689%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18380 +2190 +2100 +2355 +2325 +1844 +13.5269% +12.8993% +14.6958% +14.4815% +11.1514%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15803 +2204 +1962 +2115 +2132 +1819 +16.2071% +14.1753% +15.4515% +15.5951% +13.0077%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18971 +2719 +2695 +2854 +3046 +2513 +16.7302% +16.5581% +17.7080% +19.1272% +15.2692%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19658 +2641 +2480 +2745 +2913 +2309 +15.5198% +14.4371% +16.2301% +17.3962% +13.3091%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 6384 +2737 +2471 +2520 +2845 +2570 +75.0480% +63.1485% +65.2174% +80.3899% +67.3833%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6508 +2208 +1905 +1711 +1531 +1339 +51.3488% +41.3861% +35.6681% +30.7615% +25.9044%
SCP_Astral_250pg_3ms 576 22 936 741 736 3481 +2905 +3459 +2545 +2740 +2745 +504.3403% +15722.7273% +271.9017% +369.7706% +372.9620%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 5224 +4587 +3144 +3195 +3178 +3156 +720.0942% +151.1538% +157.4667% +155.3275% +152.6112%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8777 +2532 +2431 +2761 +2650 +2558 +40.5444% +38.3076% +45.8943% +43.2512% +41.1320%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8677 +1955 +1948 +1665 +1654 +1335 +29.0836% +28.9493% +23.7450% +23.5512% +18.1831%
SCP_Astral_500pg_3ms 982 2365 2177 2236 6067 +5085 +3702 +3890 +3831 +517.8208% +156.5328% +178.6863% +171.3327%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 8187 +4479 +4180 +4142 +4269 +4084 +120.7929% +104.3174% +102.3980% +108.9587% +99.5369%
SCP_Astral_MBR 20165 20129 20074 19793 19898 23009 +2844 +2880 +2935 +3216 +3111 +14.1036% +14.3077% +14.6209% +16.2482% +15.6347%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5086 +401 +386 +454 +347 +8.5592% +8.2128% +9.8014% +7.3222%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 260638 +15379 +13216 +6.2705% +5.3415%
EWZ_2P_MBR_Exploris_Human 115447 117345 120877 +5430 +3532 +4.7035% +3.0099%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 139484 +10516 +8778 +8.1540% +6.7158%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 202405 +24231 +18862 +13.5996% +10.2766%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 202405 +24231 +18862 +13.5996% +10.2766%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8535 +690 +360 +380 +332 +286 +8.7954% +4.4037% +4.6597% +4.0473% +3.4671%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12837 +1476 +1343 +1486 +1499 +1039 +12.9918% +11.6844% +13.0914% +13.2210% +8.8066%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12800 +1327 +1240 +1323 +1404 +968 +11.5663% +10.7266% +11.5274% +12.3201% +8.1812%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4535 +407 +443 +435 +352 +9.8595% +10.8260% +10.6098% +8.4150%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4586 +371 +338 +368 +372 +249 +8.8019% +7.9567% +8.7245% +8.8277% +5.7413%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4486 +411 +352 +396 +389 +301 +10.0859% +8.5148% +9.6822% +9.4948% +7.1924%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4604 +355 +367 +360 +373 +250 +8.3549% +8.6618% +8.4826% +8.8159% +5.7418%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8255 +1000 +673 +915 +776 +718 +13.7836% +8.8763% +12.4659% +10.3757% +9.5263%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4400 +1155 +1011 +989 +1082 +839 +35.5932% +29.8318% +28.9944% +32.6100% +23.5608%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4212 +958 +779 +921 +778 +720 +29.4407% +22.6915% +27.9854% +22.6558% +20.6186%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3853 +1403 +1457 +1403 +1456 +1419 +57.2653% +60.8097% +57.2653% +60.7426% +58.2991%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3788 +1280 +1352 +1154 +1146 +1205 +51.0367% +55.5008% +43.8117% +43.3762% +46.6512%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6314 +735 +658 +810 +768 +660 +13.1744% +11.6337% +14.7166% +13.8478% +11.6732%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5472 +751 +634 +689 +661 +628 +15.9076% +13.1046% +14.4052% +13.7393% +12.9645%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6594 +983 +939 +998 +1041 +881 +17.5192% +16.6048% +17.8342% +18.7466% +15.4210%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6774 +928 +825 +931 +969 +809 +15.8741% +13.8679% +15.9336% +16.6925% +13.5624%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2328 +1036 +904 +922 +1040 +969 +80.1858% +63.4831% +65.5761% +80.7453% +71.3024%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2347 +779 +687 +589 +474 +477 +49.6811% +41.3855% +33.5040% +25.3070% +25.5080%
SCP_Astral_250pg_3ms 307 8 350 283 281 1445 +1138 +1437 +1095 +1162 +1164 +370.6840% +17962.5000% +312.8571% +410.6007% +414.2349%
SCP_Astral_250pg_6ms 637 756 751 766 767 1917 +1280 +1161 +1166 +1151 +1150 +200.9419% +153.5714% +155.2597% +150.2611% +149.9348%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3163 +956 +888 +994 +933 +946 +43.3167% +39.0330% +45.8276% +41.8386% +42.6703%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3086 +683 +698 +609 +547 +488 +28.4228% +29.2295% +24.5862% +21.5439% +18.7837%
SCP_Astral_500pg_3ms 525 902 828 835 2330 +1805 +1428 +1502 +1495 +343.8095% +158.3149% +181.4010% +179.0419%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2962 +1644 +1515 +1476 +1527 +1494 +124.7344% +104.6994% +99.3271% +106.4111% +101.7711%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5353 +645 +633 +641 +638 +637 +13.7001% +13.4110% +13.6036% +13.5313% +13.5072%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5086 +401 +386 +454 +347 +8.5592% +8.2128% +9.8014% +7.3222%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7436 +395 +330 +5.6100% +4.6440%
EWZ_2P_MBR_Exploris_Human 6167 6284 6401 +234 +117 +3.7944% +1.8619%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7446 +559 +483 +8.1167% +6.9367%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6418 +614 +463 +10.5789% +7.7750%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6418 +614 +463 +10.5789% +7.7750%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 97094 +2815
MTAC_3P_Alternating 65832 71934 +6102
MTAC_3P_Standard 65967 71985 +6018
MTAC_Yeast_Alternating_3min 12239 13307 +1068
MTAC_Yeast_Alternating_5min 12660 13508 +848
MTAC_Yeast_Standard_3min 12180 13183 +1003
MTAC_Yeast_Standard_5min 12772 13595 +823
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 168666 +11381
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12403 +2381
SCP_Astral_1000pg_24ms 9989 12078 +2089
SCP_Astral_1000pg_3ms 6349 10612 +4263
SCP_Astral_1000pg_6ms 4949 7222 +2273
SCP_Astral_10ng_12ms 16536 18380 +1844
SCP_Astral_10ng_24ms 13982 15803 +1821
SCP_Astral_10ng_3ms 16458 18971 +2513
SCP_Astral_10ng_6ms 17349 19654 +2305
SCP_Astral_250pg_12ms 3814 6384 +2570
SCP_Astral_250pg_24ms 5169 6508 +1339
SCP_Astral_250pg_3ms 736 3477 +2741
SCP_Astral_250pg_6ms 2066 5224 +3158
SCP_Astral_500pg_12ms 6219 8775 +2556
SCP_Astral_500pg_24ms 7342 8677 +1335
SCP_Astral_500pg_3ms 2234 6062 +3828
SCP_Astral_500pg_6ms 4103 8187 +4084
SCP_Astral_MBR 19891 23009 +3118
Seer_Astral_45 242898
Seer_Astral_single 4739 5086 +347
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 260637 +13215
EWZ_2P_MBR_Exploris_Human 117340 120871 +3531
EWZ_2P_MBR_Exploris_YeastHuman 130702 139482 +8780
MacCoss_Eclipse_Normalization_noNorm 183540 202405 +18865
MacCoss_Eclipse_Normalization_yesNorm 183540 202405 +18865

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 0.0000 +0.0011 +0.0011
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 0.0005 +0.0012 +0.0012
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0002 +0.0003 -0.0001 +0.0008 +0.0006 +0.0006
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0002 +0.0012 -0.0006 +0.0004 +0.0005 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0004 +0.0020 +0.0023 +0.0031 +0.0031
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0009 +0.0013 +0.0022 +0.0023 +0.0024 +0.0024
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 0.0007 +0.0026 +0.0020 +0.0019 +0.0027 +0.0027
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0019 +0.0030 +0.0039 +0.0044 +0.0045
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0014 +0.0008 +0.0008
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0012 +0.0013 +0.0009 +0.0023 +0.0007 +0.0007
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0001 +0.0024 +0.0031 +0.0021
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0015 +0.0069 +0.0048 +0.0047 +0.0062 +0.0062
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0007 +0.0037 +0.0055 +0.0037 +0.0045 +0.0053
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0011 +0.0013 +0.0022 +0.0047 +0.0037 +0.0037
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0006 +0.0028 +0.0023 +0.0031 +0.0031
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0009 +0.0029 +0.0000 +0.0024 +0.0022 +0.0022
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0008 +0.0032 +0.0034 +0.0026 +0.0026 +0.0026
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0003 +0.0005 -0.0004 +0.0019 +0.0009 +0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0013 +0.0025 +0.0027 -0.0016 +0.0039 +0.0039
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0020 +0.0022 +0.0032 +0.0044 +0.0051 +0.0051
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0056 +0.0125 +0.0056 +0.0056
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0045 +0.0096 +0.0072 +0.0095 +0.0090
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0005 +0.0027 +0.0015 +0.0033 +0.0031 +0.0031
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0028 +0.0041 +0.0052 +0.0040 +0.0039 +0.0039
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0035 +0.0047 +0.0057 +0.0069 +0.0069
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0047 +0.0078 +0.0080 +0.0062 +0.0062
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0006 +0.0033 +0.0026 +0.0020 +0.0028 +0.0028
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 0.0020 +0.0046 +0.0047
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 0.0001 +0.0030 +0.0015
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0025 -0.0015 -0.0014 -0.0030 -0.0032 -0.0014
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 0.0002 +0.0015 +0.0027 +0.0032 +0.0028 +0.0046
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0002 +0.0063 +0.0050 +0.0046 +0.0042
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0027 +0.0014 +0.0012 +0.0022 +0.0007 +0.0030
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 0.0002 +0.0060 +0.0050 +0.0022 +0.0030 +0.0026
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0018 +0.0054 +0.0063 +0.0074 +0.0072
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0018 -0.0016 +0.0012
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 0.0013 +0.0042 +0.0014 +0.0041 +0.0021 +0.0030
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0013 +0.0036 +0.0029 +0.0030 +0.0028
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0003 +0.0073 +0.0061 +0.0073 +0.0073 +0.0086
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0006 +0.0053 +0.0053 +0.0066 +0.0066 +0.0081
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0003 +0.0021 +0.0052 +0.0046 +0.0048 +0.0049
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0044 +0.0010 -0.0004 +0.0010 +0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0006 +0.0026 +0.0017 +0.0010 +0.0039 +0.0030
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0002 +0.0038 +0.0075 +0.0068 +0.0062 +0.0062
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0010 +0.0045 +0.0010 +0.0044 +0.0037 +0.0039
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0026 +0.0079 +0.0102 +0.0060 +0.0090 +0.0087
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0049 +0.0090 +0.0091 +0.0075 +0.0062 +0.0091
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0062 -0.0035 -0.0062 +0.0023 -0.0062 -0.0062
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0054 +0.0153 +0.0121 +0.0138 +0.0142 +0.0142
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0011 +0.0047 +0.0050 -0.0003 +0.0031 +0.0035
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0011 +0.0031 +0.0012 +0.0062 +0.0073 +0.0071
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0007 +0.0048 -0.0064 -0.0013 +0.0008 +0.0009
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0048 +0.0092 +0.0093 +0.0055 +0.0103 +0.0090
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0000 +0.0059 +0.0030 +0.0025 +0.0050 +0.0057
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0022 +0.0096 +0.0095
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 0.0001 +0.0014 +0.0014
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0008 +0.0010 +0.0010
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0001 +0.0002 -0.0002 +0.0003 +0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0001 +0.0010 -0.0001 +0.0005 +0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0000 +0.0010 +0.0013 +0.0014 +0.0014
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0006 +0.0010 +0.0014 +0.0016 +0.0014 +0.0014
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0008 +0.0017 +0.0016 +0.0016 +0.0019 +0.0019
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0013 +0.0021 +0.0023 +0.0027 +0.0028
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0012 +0.0010 +0.0010
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0012 +0.0017 +0.0007 +0.0019 +0.0013 +0.0013
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0003 +0.0018 +0.0033 +0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0015 +0.0061 +0.0043 +0.0046 +0.0052 +0.0052
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0008 +0.0028 +0.0037 +0.0033 +0.0034 +0.0042
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0014 +0.0012 +0.0020 +0.0041 +0.0038 +0.0038
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0002 +0.0019 +0.0012 +0.0018 +0.0018
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0005 +0.0019 +0.0001 +0.0017 +0.0013 +0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0006 +0.0026 +0.0026 +0.0022 +0.0021 +0.0021
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0001 +0.0004 -0.0003 +0.0011 +0.0007 +0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 -0.0008 +0.0022 +0.0019 -0.0006 +0.0023 +0.0023
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0020 +0.0027 +0.0028 +0.0033 +0.0034 +0.0034
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0062 +0.0121 +0.0062 +0.0062
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0041 +0.0078 +0.0062 +0.0071 +0.0071
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0012 +0.0031 +0.0016 +0.0032 +0.0026 +0.0026
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0028 +0.0044 +0.0046 +0.0046 +0.0045 +0.0045
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0036 +0.0018 +0.0040 +0.0052 +0.0052
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0043 +0.0068 +0.0062 +0.0052 +0.0052
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0007 +0.0024 +0.0022 +0.0015 +0.0020 +0.0020
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0023 +0.0035 +0.0037
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 0.0003 +0.0020 +0.0009
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0013 -0.0012 -0.0011 -0.0016 -0.0016 -0.0008
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 0.0003 +0.0011 +0.0016 +0.0023 +0.0021 +0.0026
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0009 +0.0045 +0.0043 +0.0039 +0.0031
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 -0.0014 +0.0023 +0.0007 +0.0010 -0.0001 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 0.0003 +0.0041 +0.0038 +0.0017 +0.0019 +0.0022
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0005 +0.0027 +0.0031 +0.0042 +0.0038
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0013 -0.0009 +0.0007
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 0.0026 +0.0053 +0.0020 +0.0043 +0.0042 +0.0046
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 0.0001 +0.0038 +0.0024 +0.0033 +0.0040
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0006 +0.0054 +0.0061 +0.0063 +0.0049 +0.0065
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0011 +0.0033 +0.0022 +0.0030 +0.0020 +0.0054
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0003 +0.0028 +0.0038 +0.0043 +0.0043 +0.0036
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0029 +0.0018 +0.0002 +0.0013 +0.0015
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0010 +0.0022 +0.0003 +0.0004 +0.0015 +0.0020
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0008 +0.0030 +0.0054 +0.0046 +0.0041 +0.0048
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0011 +0.0027 +0.0007 +0.0027 +0.0018 +0.0022
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0013 +0.0052 +0.0054 +0.0033 +0.0044 +0.0058
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0021 +0.0035 +0.0053 +0.0025 +0.0022 +0.0050
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0020 +0.0041 +0.0062 +0.0027 -0.0020 -0.0020
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0043 +0.0143 +0.0111 +0.0098 +0.0090 +0.0090
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0007 +0.0046 +0.0042 +0.0014 +0.0034 +0.0029
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0004 +0.0023 +0.0003 +0.0047 +0.0049 +0.0071
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0016 +0.0048 -0.0050 -0.0012 +0.0013 +0.0014
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0046 +0.0066 +0.0069 +0.0037 +0.0074 +0.0065
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0010 +0.0034 +0.0028 +0.0033 +0.0039 +0.0051
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0023 +0.0097 +0.0091
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 20707 -3688 -3881

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 3877 +3106 +3115

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.1872 +0.1556 +0.1562

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 277 -567 +906

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 1092 +902 +1036

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 3.9422 +3.7171 +3.9422

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 3 +1 +0 +0 +0 +2
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 1 +0 +0 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 1 +0 +0 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1909 +0.0450 +0.0488 +0.0509 +0.0535 +0.0534
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1820 +0.0428 +0.0458 +0.0469 +0.0497 +0.0496
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1867 +0.0412 +0.0443 +0.0460 +0.0459
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1737 +0.0207 +0.0328 +0.0361 +0.0381 +0.0382
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1943 +0.0245 +0.0304 +0.0327 +0.0344 +0.0345
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1705 +0.0202 +0.0339 +0.0368 +0.0382 +0.0381
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1602 +0.0122 +0.0103 +0.0107 +0.0097 +0.0096
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.6034 +0.0165 +0.0164
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2192 +0.0475 +0.0474

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0948 +0.0185 +0.0209 +0.0221 +0.0228 +0.0191
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0898 +0.0174 +0.0195 +0.0198 +0.0210 +0.0180
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0804 +0.0131 +0.0144 +0.0146 +0.0117
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0705 -0.0072 +0.0103 +0.0113 +0.0117 +0.0104
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0836 +0.0044 +0.0080 +0.0083 +0.0064 +0.0061
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0665 -0.0105 +0.0098 +0.0097 +0.0097 +0.0082
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1064 +0.0036 +0.0045 +0.0028 +0.0037 +0.0031
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5818 -0.0063 -0.0061
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1356 +0.0123 +0.0109

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0264 -0.0020 +0.0070 +0.0012 +0.0000 -0.0513
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0035 -0.0076 +0.0055 -0.0002 -0.0001 -0.0372
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0065 +0.0007 -0.0023 -0.0001 -0.0000 +0.0056
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0535 +0.0012 -0.0008 +0.0020 -0.0002 -0.0731
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0649 -0.0054 -0.0006 -0.0003 +0.0001 -0.0074
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0640 -0.0080 +0.0050 -0.0016 -0.0001 +0.0350
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1363 -0.0059 -0.0059 +0.0211 -0.0012 -0.0989
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0787 +0.0062 +0.0047 -0.0191 -0.0001 +0.0183
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1889 +0.0183 -0.0240 +0.0287 +0.0020 -0.0916
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1062 +0.0048 -0.0054 -0.0067 +0.0002 +0.0177
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0471 +0.0009 +0.0001 -0.0089 -0.0000 +0.0015
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2100 +0.0051 -0.0017 +0.0004 +0.0004 +0.0061
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1339 -0.0032 -0.0062 -0.0160 +0.0006 +0.1108
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0839 +0.0043 -0.0045 -0.0054 -0.0001 -0.0180
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0503 +0.0169 -0.0238 +0.0355 +0 -0.0462
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0343 +0.0009 +0.0076 -0.0005 +0.0006 -0.0396
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0025 -0.0089 +0.0045 +0.0004 +0.0011 -0.0397
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0002 +0.0054 -0.0044 +0.0010 +0.0033 -0.0066
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0533 +0.0013 +0.0005 -0.0055 +0.0004 -0.0678
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0651 -0.0060 -0.0005 -0.0005 -0.0005 -0.0046
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0603 -0.0084 +0.0078 -0.0007 +0.0020 +0.0273
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1675 -0.0077 -0.0028 +0.0144 -0.0004 -0.0532
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0776 +0.0048 +0.0016 -0.0170 -0.0057 +0.0276
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2433 +0.0504 -0.0481 +0.0073 +0.0089 -0.0310
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1030 +0.0031 -0.0032 -0.0081 +0.0006 +0.0265
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0446 +0.0011 -0.0008 -0.0084 -0.0000 +0.0025
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2210 +0.0036 -0.0008 +0.0016 +0.0018 +0.0160
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1019 +0.0005 -0.0096 -0.0297 +0.0070 +0.0903
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0878 +0.0056 -0.0034 -0.0033 +0.0038 -0.0245
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0477 +0.0405 -0.0089 +0.0322 +0.0276 -0.0972
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.2319 +0.0343 +0.0202 -0.0086 +0.0005 -0.0764
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1724 +0.0169 -0.0058 +0.0004 +0.0004 -0.0379
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.2014 +0.0117 -0.0078 +0.0011 -0.0001 -0.0593
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.2061 +0.0441 -0.0007 -0.0136 +0.0007 -0.0925
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1768 +0.0164 -0.0031 -0.0002 +0.0007 -0.0432
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1925 +0.0170 -0.0063 +0.0017 +0.0006 -0.0761
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2792 +0.0445 +0.0761 -0.1281 +0.0017 -0.2933
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0588 -0.0103 +0.0134 -0.0147 -0.0018 -0.0907
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.4964 -0.0030 +0.1483 +0.0078 -0.0120 -0.4491
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.2055 +0.0037 +0.0045 +0.0051 +0.0002 -0.1452
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0527 +0.0676 -0.0087 -0.0168 +0.0006 -0.0996
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.2082 +0.0316 +0.0062 -0.0049 +0.0001 -0.1272
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.3152 -0.0093 +0.0378 -0.0706 +0.0033 -0.2649
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0883 +0.0977 -0.0155 +0.0159 +0.0001 -0.1597
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.7493 +0.0737 +0.1982 -0.0827 -0.0008 -0.5251
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0848 +0.0149 -0.0182 -0.0054 +0.1015 -0.1374
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0548 +0.0035 +0.0005 +0.0043 +0.0189 -0.0456
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0765 -0.0157 -0.0104 +0.0083 +0.0352 -0.0709
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0871 -0.0042 +0.0002 -0.0084 +0.0711 -0.1036
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0522 +0.0032 -0.0030 +0.0035 +0.0313 -0.0507
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0782 +0.0000 +0.0073 -0.0081 +0.0305 -0.0777
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.1061 +0.0146 +0.0452 -0.0355 +0.0761 -0.1977
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0239 -0.0057 -0.0062 -0.0031 +0.0154 -0.0400
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.2439 -0.1294 +0.1626 +0.0090 +0.0813 -0.3379
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0382 -0.0046 +0.0074 +0.0016 +0.0039 -0.0348
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0117 +0.0109 -0.0066 +0.0090 -0.0065 -0.0251
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0506 -0.0053 +0.0093 +0.0025 +0.0083 -0.0401
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.1235 -0.0166 +0.0170 -0.0166 +0.0315 -0.1255
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0287 +0.0068 -0.0006 -0.0039 +0.0560 -0.1010
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.3595 -0.0891 -0.0032 -0.0082 +0.0618 -0.1328
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 23.6700 -0.4000 +6.3500 +3.8000 +6.5400 +4.6400 -1.6618% +36.6628% +19.1243% +38.1786% +24.3826%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 11.5900 -1.1600 +2.5200 +3.2300 +2.3000 +3.4600 -9.0980% +27.7839% +38.6364% +24.7578% +42.5584%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 12.1900 -0.1200 +3.2300 +2.5300 +1.3800 +2.4000 -0.9748% +36.0491% +26.1905% +12.7660% +24.5148%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.7300 +1.5000 +1.3200 +0.7900 +1.4500 +35.4610% +29.9320% +15.9919% +33.8785%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.9400 +0.5600 +1.5600 +1.1900 +1.4000 +1.3800 +10.4089% +35.6164% +25.0526% +30.8370% +30.2632%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.4600 +0.0300 +1.3200 +1.0200 +0.8000 +1.2200 +0.5525% +31.8841% +22.9730% +17.1674% +28.7736%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.5800 +0.0300 +1.1600 +1.0500 +1.1200 +1.0400 +0.5405% +26.2443% +23.1788% +25.1121% +22.9075%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 18.7800 -8.8800 -0.9800 +0.4600 -0.5000 +0.8800 -32.1041% -4.9595% +2.5109% -2.5934% +4.9162%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 6.5700 +0.7800 +1.9800 +1.9200 +2.4800 +2.2100 +13.4715% +43.1373% +41.2903% +60.6357% +50.6881%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.8500 -0.4100 +1.4500 -0.0300 +0.8400 -6.5495% +32.9545% -0.5102% +16.7665%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.7300 +1.2100 +2.0000 +0.9300 +2.0900 +1.9000 +26.7699% +53.6193% +19.3750% +57.4176% +49.6084%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.6500 -1.0900 +1.1400 +0.7300 +1.2100 +0.9300 -18.9895% +32.4786% +18.6224% +35.1744% +25.0000%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 8.0200 +0.9500 +2.4900 +2.5100 +2.2800 +2.5500 +13.4371% +45.0271% +45.5535% +39.7213% +46.6179%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 7.2500 -0.3400 +1.5200 +1.1100 +1.7100 +1.3600 -4.4796% +26.5271% +18.0782% +30.8664% +23.0900%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 6.6800 +0.2300 +2.0100 +2.3800 +2.2700 +2.2600 +3.5659% +43.0407% +55.3488% +51.4739% +51.1312%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 7.1300 -0.2500 +2.2000 +2.5000 +1.5100 +2.1700 -3.3875% +44.6247% +53.9957% +26.8683% +43.7500%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 5.3300 +0.5900 +1.6700 +1.9400 +1.7400 +12.4473% +45.6284% +57.2271% +48.4680%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 5.1900 -0.0700 +1.3500 +1.4300 +1.1300 -1.3308% +35.1563% +38.0319% +27.8325%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.7900 +0.1400 +1.3600 +1.0800 +1.3400 +1.2400 +3.0108% +39.6501% +29.1105% +38.8406% +34.9296%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 5.1000 +0.9300 +1.8100 +1.4100 +1.8300 +1.5800 +22.3022% +55.0152% +38.2114% +55.9633% +44.8864%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 5.0800 -0.2000 +1.5500 +1.4800 +1.5900 +1.3800 -3.7879% +43.9093% +41.1111% +45.5587% +37.2973%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 6.5600 +1.0500 +2.7400 +2.4100 +1.7500 +2.5300 +19.0563% +71.7277% +58.0723% +36.3825% +62.7792%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 5.0200 +0.2900 +1.5600 +1.4500 +1.2500 +6.1311% +45.0867% +40.6162% +33.1565%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 6.8900 +2.2400 +3.2700 +3.1600 +3.1100 +3.3900 +48.1720% +90.3315% +84.7185% +82.2751% +96.8571%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 9.1700 +0.1300 +2.6200 +3.0700 +1.9600 +1.4381% +40% +50.3279% +27.1845%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 6.0100 +1.5400 +1.8700 +0.4300 +0.7900 +34.4519% +45.1691% +7.7061% +15.1341%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 31.0500 +4.8700 +6.7700 +18.6020% +27.8830%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 15.1200 +2.2100 +2.7000 +17.1185% +21.7391%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 17.4200 +5.3600 +3.0100 +44.4444% +20.8883%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 41.7200 +14.2100 +13.4400 +51.6539% +47.5248%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 42.1600 +14.4900 +13.6600 +52.3672% +47.9298%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png