Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1344732 +248238 +37727 +32777 +51191 +51191 +22.6392% +2.8865% +2.4983% +3.9574% +3.9574%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 651770 +65448 +36008 +41060 +51889 +51889 +11.1625% +5.8477% +6.7233% +8.6499% +8.6499%
MTAC_3P_Standard 596590 623022 617574 607435 607435 656346 +59756 +33324 +38772 +48911 +48911 +10.0163% +5.3488% +6.2781% +8.0521% +8.0521%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 151274 +13726 +14435 +15714 +15714 +9.9791% +10.5489% +11.5919% +11.5919%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 171101 +15460 +14550 +14592 +16066 +16257 +9.9331% +9.2941% +9.3234% +10.3628% +10.4990%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 153690 +15181 +14305 +14398 +15805 +15903 +10.9603% +10.2629% +10.3366% +11.4625% +11.5417%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 171301 +12339 +12569 +12141 +13379 +13379 +7.7622% +7.9184% +7.6282% +8.4719% +8.4719%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1318715 +295979 +164046 +194842 +134631 +134631 +28.9399% +14.2072% +17.3367% +11.3701% +11.3701%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 51712 +10830 +10012 +9287 +9612 +9612 +26.4909% +24.0096% +21.8904% +22.8314% +22.8314%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 51076 +10007 +8674 +9053 +9924 +9924 +24.3663% +20.4566% +21.5430% +24.1155% +24.1155%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 40362 +31622 +17247 +17347 +17449 +17449 +361.8078% +74.6139% +75.3726% +76.1533% +76.1533%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 28179 +11244 +10626 +9770 +9831 +9831 +66.3950% +60.5367% +53.0719% +53.5808% +53.5808%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 116356 +16448 +13465 +17373 +17708 +17708 +16.4631% +13.0867% +17.5515% +17.9507% +17.9507%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 85383 +14285 +12655 +13938 +14257 +14257 +20.0920% +17.4005% +19.5087% +20.0447% +20.0447%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 120452 +14748 +13955 +14830 +16018 +15940 +13.9522% +13.1037% +14.0406% +15.3379% +15.2518%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 129040 +13883 +11724 +14718 +15959 +15790 +12.0557% +9.9935% +12.8742% +14.1129% +13.9426%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 18091 +7897 +7285 +6853 +6858 +6858 +77.4671% +67.4163% +60.9806% +61.0523% +61.0523%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 18721 +3914 +3288 +2680 +3022 +3022 +26.4334% +21.3050% +16.7072% +19.2496% +19.2496%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8297 +7036 +6265 +5847 +5911 +5911 +557.9699% +308.3169% +238.6531% +247.7368% +247.7368%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14560 +13124 +9777 +8870 +8829 +8829 +913.9276% +204.4115% +155.8875% +154.0569% +154.0569%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 30342 +8632 +8447 +7762 +7879 +7879 +39.7605% +38.5796% +34.3756% +35.0755% +35.0755%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 30877 +5017 +4734 +4617 +5252 +5252 +19.4006% +18.1081% +17.5819% +20.4956% +20.4956%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 18346 +14862 +11448 +11512 +11512 +426.5786% +165.9611% +168.4519% +168.4519%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 26724 +16025 +15250 +13842 +13835 +13835 +149.7804% +132.9092% +107.4523% +107.3396% +107.3396%
SCP_Astral_MBR 92167 93585 91884 90864 90838 109355 +17188 +15770 +17471 +18491 +18517 +18.6488% +16.8510% +19.0142% +20.3502% +20.3846%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 58355 +1656 +2562 +2464 +2464 +2.9207% +4.5920% +4.4086% +4.4086%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1913452 +137324 +138106 +7.7316% +7.7791%
EWZ_2P_MBR_Exploris_Human 836809 836809 900020 +63211 +63211 +7.5538% +7.5538%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1000019 +85095 +86070 +9.3008% +9.4174%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2279711 +201677 +201675 +9.7052% +9.7051%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2279711 +201677 +201675 +9.7052% +9.7051%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 149920 +38416 +16301 +18561 +17889 +17889 +34.4526% +12.1996% +14.1300% +13.5491% +13.5491%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 125529 +17262 +8177 +10870 +10713 +10713 +15.9439% +6.9679% +9.4803% +9.3306% +9.3306%
MTAC_3P_Standard 110265 118693 115800 116148 116148 126855 +16590 +8162 +11055 +10707 +10707 +15.0456% +6.8766% +9.5466% +9.2184% +9.2184%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56522 +7664 +7490 +7527 +7527 +15.6863% +15.2757% +15.3628% +15.3628%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63199 +9230 +8124 +7359 +7315 +7378 +17.1024% +14.7508% +13.1787% +13.0896% +13.2172%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 57506 +8885 +7841 +7217 +7046 +7091 +18.2740% +15.7878% +14.3511% +13.9635% +14.0653%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 63219 +8159 +7300 +6512 +6392 +6392 +14.8184% +13.0546% +11.4836% +11.2482% +11.2482%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 71544 +20272 +12760 +16497 +12951 +12979 +39.5381% +21.7066% +29.9689% +22.1033% +22.1617%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 19409 +4969 +4451 +4160 +3702 +3702 +34.4114% +29.7567% +27.2805% +23.5691% +23.5691%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 19114 +4631 +4049 +4198 +4044 +4042 +31.9754% +26.8769% +28.1443% +26.8348% +26.8179%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 16364 +7624 +6988 +6975 +7000 +6979 +87.2311% +74.5307% +74.2891% +74.7544% +74.3633%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 15988 +7090 +6729 +6204 +6178 +6178 +79.6808% +72.6752% +63.4096% +62.9766% +62.9766%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 41824 +6959 +5527 +7482 +7399 +7399 +19.9598% +15.2272% +21.7867% +21.4931% +21.4931%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 31033 +6384 +5567 +5914 +5810 +5810 +25.8996% +21.8605% +23.5439% +23.0345% +23.0345%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 43961 +7273 +6285 +6312 +6540 +6502 +19.8239% +16.6817% +16.7654% +17.4768% +17.3576%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 46232 +6076 +4687 +6189 +6339 +6286 +15.1310% +11.2817% +15.4559% +15.8900% +15.7362%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7189 +3523 +3240 +2980 +2943 +2943 +96.0993% +82.0461% +70.8007% +69.3123% +69.3123%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7332 +2033 +1721 +1477 +1266 +1265 +38.3657% +30.6719% +25.2263% +20.8704% +20.8505%
SCP_Astral_250pg_3ms 675 721 908 879 879 3879 +3204 +3158 +2971 +3000 +3000 +474.6667% +438.0028% +327.2026% +341.2969% +341.2969%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6104 +4668 +4366 +3959 +3941 +3939 +325.0696% +251.2083% +184.5688% +182.2006% +181.9400%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12007 +4213 +4035 +3755 +3601 +3599 +54.0544% +50.6147% +45.5041% +42.8384% +42.8045%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 11708 +2550 +2366 +2337 +2294 +2293 +27.8445% +25.3265% +24.9386% +24.3680% +24.3548%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 7913 +6067 +5313 +5327 +5324 +328.6566% +204.3462% +205.9938% +205.6392%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 10639 +6765 +6484 +5865 +5834 +5835 +174.6257% +156.0529% +122.8530% +121.4152% +121.4613%
SCP_Astral_MBR 24110 24991 24570 24544 24527 29911 +5801 +4920 +5341 +5367 +5384 +24.0606% +19.6871% +21.7379% +21.8669% +21.9513%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 58355 +1656 +2562 +2464 +2464 +2.9207% +4.5920% +4.4086% +4.4086%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 61980 +6709 +6833 +12.1384% +12.3905%
EWZ_2P_MBR_Exploris_Human 48465 48473 54129 +5664 +5656 +11.6868% +11.6684%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 57452 +6206 +6275 +12.1102% +12.2614%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 78373 +5095 +5096 +6.9530% +6.9544%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 78373 +5095 +5096 +6.9530% +6.9544%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91923 +4003 -965 -2059 -1518 -2363 +4.5530% -1.0389% -2.1908% -1.6246% -2.5062%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67637 +3864 +3663 +4026 +4622 +1802 +6.0590% +5.7258% +6.3291% +7.3348% +2.7371%
MTAC_3P_Standard 64317 64464 64219 63385 65967 67945 +3628 +3481 +3726 +4560 +1978 +5.6408% +5.3999% +5.8020% +7.1941% +2.9985%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12897 +830 +927 +957 +658 +6.8783% +7.7444% +8.0151% +5.3763%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13050 +618 +579 +688 +722 +390 +4.9710% +4.6428% +5.5654% +5.8566% +3.0806%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12667 +659 +620 +707 +699 +487 +5.4880% +5.1465% +5.9114% +5.8406% +3.9984%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13248 +687 +783 +771 +838 +474 +5.4693% +6.2816% +6.1794% +6.7526% +3.7107%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 156937 +10713 +3403 +2947 +1110 -349 +7.3264% +2.2164% +1.9138% +0.7123% -0.2219%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11183 +2020 +1655 +1598 +1849 +1161 +22.0452% +17.3699% +16.6719% +19.8093% +11.5845%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11166 +1868 +1405 +1754 +1613 +1177 +20.0903% +14.3940% +18.6358% +16.8847% +11.7830%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9203 +6753 +3119 +2956 +3087 +2854 +275.6327% +51.2656% +47.3187% +50.4742% +44.9520%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6266 +1563 +1678 +1308 +1343 +1317 +33.2341% +36.5737% +26.3816% +27.2801% +26.6114%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17440 +1250 +1160 +1415 +1385 +904 +7.7208% +7.1253% +8.8300% +8.6266% +5.4669%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14892 +1293 +1051 +1204 +1221 +908 +9.5081% +7.5934% +8.7960% +8.9313% +6.4931%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17562 +1310 +1286 +1445 +1637 +1104 +8.0605% +7.9012% +8.9657% +10.2794% +6.7080%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18191 +1174 +1013 +1278 +1446 +842 +6.8990% +5.8971% +7.5563% +8.6354% +4.8533%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5325 +1678 +1412 +1461 +1786 +1511 +46.0104% +36.0848% +37.8106% +50.4662% +39.6172%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5381 +1081 +778 +584 +404 +212 +25.1395% +16.9020% +12.1743% +8.1173% +4.1014%
SCP_Astral_250pg_3ms 576 22 936 741 736 2471 +1895 +2449 +1535 +1730 +1735 +328.9931% +11131.8182% +163.9957% +233.4683% +235.7337%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4384 +3747 +2304 +2355 +2338 +2316 +588.2261% +110.7692% +116.0670% +114.2717% +111.9923%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7542 +1297 +1196 +1526 +1415 +1323 +20.7686% +18.8465% +25.3657% +23.0945% +21.2735%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7637 +915 +908 +625 +614 +295 +13.6120% +13.4938% +8.9133% +8.7427% +4.0180%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5102 +4120 +2737 +2925 +2866 +419.5519% +115.7294% +134.3592% +128.1753%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7072 +3364 +3065 +3027 +3154 +2969 +90.7228% +76.4911% +74.8331% +80.5003% +72.3617%
SCP_Astral_MBR 20165 20129 20074 19793 19898 20748 +583 +619 +674 +955 +850 +2.8911% +3.0752% +3.3576% +4.8249% +4.2718%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4904 +219 +204 +272 +165 +4.6745% +4.3404% +5.8722% +3.4817%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 249408 +4149 +1986 +1.6917% +0.8027%
EWZ_2P_MBR_Exploris_Human 115447 117345 116399 +952 -946 +0.8246% -0.8062%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 132945 +3977 +2239 +3.0837% +1.7130%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 190976 +12802 +7433 +7.1851% +4.0497%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 190976 +12802 +7433 +7.1851% +4.0497%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8380 +535 +205 +225 +177 +131 +6.8196% +2.5076% +2.7590% +2.1577% +1.5881%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12216 +855 +722 +865 +878 +418 +7.5257% +6.2815% +7.6205% +7.7439% +3.5430%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12303 +830 +743 +826 +907 +471 +7.2344% +6.4273% +7.1970% +7.9589% +3.9807%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4446 +318 +354 +346 +263 +7.7035% +8.6510% +8.4390% +6.2874%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4459 +244 +211 +241 +245 +122 +5.7888% +4.9670% +5.7136% +5.8140% +2.8130%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4359 +284 +225 +269 +262 +174 +6.9693% +5.4427% +6.5770% +6.3949% +4.1577%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4540 +291 +303 +296 +309 +186 +6.8487% +7.1513% +6.9746% +7.3032% +4.2719%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7861 +606 +279 +521 +382 +324 +8.3529% +3.6798% +7.0981% +5.1076% +4.2988%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4011 +766 +622 +600 +693 +450 +23.6055% +18.3535% +17.5901% +20.8861% +12.6369%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3979 +725 +546 +688 +545 +487 +22.2803% +15.9045% +20.9055% +15.8707% +13.9462%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3404 +954 +1008 +954 +1007 +970 +38.9388% +42.0701% +38.9388% +42.0108% +39.8521%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3334 +826 +898 +700 +692 +751 +32.9346% +36.8637% +26.5756% +26.1923% +29.0747%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6057 +478 +401 +553 +511 +403 +8.5678% +7.0898% +10.0472% +9.2138% +7.1277%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5203 +482 +365 +420 +392 +359 +10.2097% +7.5444% +8.7811% +8.1480% +7.4112%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6123 +512 +468 +527 +570 +410 +9.1249% +8.2759% +9.4174% +10.2647% +7.1766%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6290 +444 +341 +447 +485 +325 +7.5949% +5.7321% +7.6502% +8.3549% +5.4484%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2020 +728 +596 +614 +732 +661 +56.3467% +41.8539% +43.6700% +56.8323% +48.6387%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 1968 +400 +308 +210 +95 +98 +25.5102% +18.5542% +11.9454% +5.0721% +5.2406%
SCP_Astral_250pg_3ms 307 8 350 283 281 1025 +718 +1017 +675 +742 +744 +233.8762% +12712.5000% +192.8571% +262.1908% +264.7687%
SCP_Astral_250pg_6ms 637 756 751 766 767 1688 +1051 +932 +937 +922 +921 +164.9922% +123.2804% +124.7670% +120.3655% +120.0782%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2760 +553 +485 +591 +530 +543 +25.0566% +21.3187% +27.2476% +23.7668% +24.4926%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2772 +369 +384 +295 +233 +174 +15.3558% +16.0804% +11.9096% +9.1768% +6.6975%
SCP_Astral_500pg_3ms 525 902 828 835 1973 +1448 +1071 +1145 +1138 +275.8095% +118.7361% +138.2850% +136.2874%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2611 +1293 +1164 +1125 +1176 +1143 +98.1032% +80.4423% +75.7066% +81.9512% +77.8610%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5012 +304 +292 +300 +297 +296 +6.4571% +6.1864% +6.3667% +6.2990% +6.2765%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4904 +219 +204 +272 +165 +4.6745% +4.3404% +5.8722% +3.4817%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7206 +165 +100 +2.3434% +1.4073%
EWZ_2P_MBR_Exploris_Human 6167 6284 6248 +81 -36 +1.3134% -0.5729%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7135 +248 +172 +3.6010% +2.4702%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6184 +380 +229 +6.5472% +3.8455%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6184 +380 +229 +6.5472% +3.8455%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91914 -2365
MTAC_3P_Alternating 65832 67632 +1800
MTAC_3P_Standard 65967 67941 +1974
MTAC_Yeast_Alternating_3min 12239 12891 +652
MTAC_Yeast_Alternating_5min 12660 13047 +387
MTAC_Yeast_Standard_3min 12180 12663 +483
MTAC_Yeast_Standard_5min 12772 13244 +472
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 156932 -353
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11183 +1161
SCP_Astral_1000pg_24ms 9989 11164 +1175
SCP_Astral_1000pg_3ms 6349 9202 +2853
SCP_Astral_1000pg_6ms 4949 6264 +1315
SCP_Astral_10ng_12ms 16536 17439 +903
SCP_Astral_10ng_24ms 13982 14892 +910
SCP_Astral_10ng_3ms 16458 17560 +1102
SCP_Astral_10ng_6ms 17349 18191 +842
SCP_Astral_250pg_12ms 3814 5325 +1511
SCP_Astral_250pg_24ms 5169 5381 +212
SCP_Astral_250pg_3ms 736 2471 +1735
SCP_Astral_250pg_6ms 2066 4384 +2318
SCP_Astral_500pg_12ms 6219 7542 +1323
SCP_Astral_500pg_24ms 7342 7637 +295
SCP_Astral_500pg_3ms 2234 5099 +2865
SCP_Astral_500pg_6ms 4103 7072 +2969
SCP_Astral_MBR 19891 20748 +857
Seer_Astral_45 242898
Seer_Astral_single 4739 4904 +165
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 249405 +1983
EWZ_2P_MBR_Exploris_Human 117340 116398 -942
EWZ_2P_MBR_Exploris_YeastHuman 130702 132942 +2240
MacCoss_Eclipse_Normalization_noNorm 183540 190973 +7433
MacCoss_Eclipse_Normalization_yesNorm 183540 190973 +7433

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0005 +0.0007 +0.0007
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0004 +0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0012 -0.0007 -0.0011 -0.0002 -0.0004 -0.0004
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0009 +0.0005 -0.0013 -0.0003 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0012 +0.0003 +0.0007 +0.0014 +0.0014
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0008 -0.0004 +0.0005 +0.0006 +0.0007 +0.0007
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0006 +0.0013 +0.0007 +0.0006 +0.0014 +0.0014
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0001 +0.0011 +0.0020 +0.0025 +0.0026
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0005 -0.0011 -0.0011
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0003 +0.0004 -0.0000 +0.0014 -0.0002 -0.0002
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0009 +0.0032 +0.0039 +0.0029
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0001 +0.0055 +0.0034 +0.0032 +0.0047 +0.0047
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0022 +0.0052 +0.0069 +0.0051 +0.0060 +0.0068
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0019 +0.0021 +0.0030 +0.0055 +0.0045 +0.0045
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0005 +0.0017 +0.0012 +0.0019 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0000 +0.0020 -0.0009 +0.0014 +0.0013 +0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0005 +0.0029 +0.0032 +0.0023 +0.0023 +0.0023
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0000 +0.0007 -0.0001 +0.0021 +0.0011 +0.0011
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0020 +0.0059 +0.0060 +0.0017 +0.0072 +0.0072
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0011 -0.0009 +0.0000 +0.0013 +0.0020 +0.0020
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0018 +0.0087 +0.0018 +0.0018
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0029 +0.0080 +0.0055 +0.0078 +0.0073
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0011 +0.0010 -0.0001 +0.0016 +0.0015 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0039 +0.0052 +0.0063 +0.0051 +0.0050 +0.0050
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0025 +0.0038 +0.0048 +0.0060 +0.0060
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0027 +0.0057 +0.0059 +0.0041 +0.0041
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0013 +0.0013 +0.0006 +0.0001 +0.0009 +0.0009
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0007 +0.0019 +0.0020
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0033 -0.0004 -0.0019
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0039 -0.0029 -0.0028 -0.0044 -0.0046 -0.0028
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0023 -0.0011 +0.0002 +0.0006 +0.0002 +0.0020
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0005 +0.0061 +0.0048 +0.0043 +0.0039
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0023 +0.0064 +0.0061 +0.0071 +0.0056 +0.0080
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0028 +0.0030 +0.0019 -0.0008 -0.0000 -0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0011 +0.0047 +0.0057 +0.0067 +0.0066
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0013 -0.0011 +0.0017
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0012 +0.0017 -0.0010 +0.0016 -0.0003 +0.0005
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0009 +0.0040 +0.0033 +0.0034 +0.0032
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0023 +0.0047 +0.0035 +0.0047 +0.0047 +0.0060
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0026 +0.0085 +0.0085 +0.0098 +0.0097 +0.0112
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0003 +0.0014 +0.0046 +0.0040 +0.0042 +0.0043
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0025 +0.0030 +0.0015 +0.0029 +0.0036
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0004 +0.0028 +0.0019 +0.0012 +0.0041 +0.0032
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0005 +0.0031 +0.0068 +0.0061 +0.0055 +0.0055
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0044 +0.0010 -0.0024 +0.0010 +0.0002 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0002 +0.0055 +0.0079 +0.0037 +0.0066 +0.0063
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0034 +0.0076 +0.0076 +0.0060 +0.0047 +0.0077
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0025 +0.0002 -0.0025 +0.0060 -0.0025 -0.0025
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0084 +0.0182 +0.0150 +0.0168 +0.0171 +0.0172
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0012 +0.0024 +0.0028 -0.0026 +0.0009 +0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0004 +0.0016 -0.0003 +0.0047 +0.0057 +0.0056
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0017 +0.0025 -0.0088 -0.0037 -0.0016 -0.0015
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0018 +0.0063 +0.0063 +0.0026 +0.0074 +0.0061
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0020 +0.0040 +0.0010 +0.0006 +0.0030 +0.0037
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0027 +0.0101 +0.0100
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0001 +0.0011 +0.0011
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0001 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0003 -0.0002 -0.0006 -0.0001 -0.0002 -0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0002 +0.0007 -0.0004 +0.0001 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0008 +0.0002 +0.0005 +0.0006 +0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0003 +0.0007 +0.0010 +0.0012 +0.0011 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0003 +0.0006 +0.0005 +0.0005 +0.0008 +0.0008
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0005 +0.0013 +0.0015 +0.0019 +0.0020
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 -0.0000 -0.0003 -0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0008 +0.0013 +0.0003 +0.0015 +0.0009 +0.0009
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0003 +0.0019 +0.0033 +0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0001 +0.0047 +0.0029 +0.0032 +0.0038 +0.0038
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0027 +0.0047 +0.0057 +0.0053 +0.0053 +0.0061
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0012 +0.0010 +0.0018 +0.0040 +0.0036 +0.0036
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0001 +0.0018 +0.0011 +0.0017 +0.0017
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0003 +0.0016 -0.0001 +0.0015 +0.0011 +0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0003 +0.0023 +0.0023 +0.0019 +0.0018 +0.0018
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0003 +0.0002 -0.0005 +0.0009 +0.0005 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0013 +0.0043 +0.0039 +0.0015 +0.0044 +0.0044
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0002 +0.0005 +0.0006 +0.0011 +0.0012 +0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0031 +0.0091 +0.0031 +0.0031
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0035 +0.0071 +0.0056 +0.0065 +0.0065
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0003 +0.0016 +0.0001 +0.0017 +0.0010 +0.0010
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0032 +0.0048 +0.0050 +0.0050 +0.0049 +0.0049
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0028 +0.0009 +0.0032 +0.0044 +0.0044
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0027 +0.0052 +0.0046 +0.0037 +0.0037
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0002 +0.0020 +0.0017 +0.0010 +0.0015 +0.0015
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0003 +0.0015 +0.0016
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0016 +0.0001 -0.0010
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0022 -0.0021 -0.0020 -0.0025 -0.0024 -0.0016
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0010 -0.0001 +0.0004 +0.0011 +0.0009 +0.0014
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0004 +0.0040 +0.0038 +0.0034 +0.0026
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0027 +0.0065 +0.0049 +0.0052 +0.0041 +0.0052
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0009 +0.0029 +0.0026 +0.0005 +0.0007 +0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0009 +0.0032 +0.0036 +0.0046 +0.0043
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0005 +0.0000 +0.0016
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0005 +0.0022 -0.0011 +0.0012 +0.0011 +0.0014
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0011 +0.0026 +0.0012 +0.0021 +0.0028
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0020 +0.0028 +0.0035 +0.0038 +0.0023 +0.0040
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0021 +0.0064 +0.0053 +0.0061 +0.0051 +0.0085
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0018 +0.0006 +0.0016 +0.0022 +0.0022 +0.0014
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0022 +0.0026 +0.0009 +0.0020 +0.0022
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0001 +0.0030 +0.0012 +0.0013 +0.0024 +0.0029
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0009 +0.0012 +0.0037 +0.0029 +0.0023 +0.0031
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0029 +0.0010 -0.0010 +0.0009 +0.0001 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0022 +0.0060 +0.0063 +0.0041 +0.0052 +0.0066
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0044 +0.0057 +0.0076 +0.0047 +0.0044 +0.0072
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0015 +0.0045 +0.0066 +0.0031 -0.0015 -0.0015
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0062 +0.0162 +0.0130 +0.0117 +0.0110 +0.0110
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0018 +0.0022 +0.0017 -0.0011 +0.0009 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0008 +0.0012 -0.0008 +0.0036 +0.0037 +0.0060
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 -0.0002 +0.0030 -0.0069 -0.0031 -0.0006 -0.0005
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0020 +0.0040 +0.0042 +0.0011 +0.0048 +0.0038
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0003 +0.0020 +0.0014 +0.0019 +0.0025 +0.0037
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0027 +0.0101 +0.0096
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 13413 -10982 -11175

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 177 -594 -585

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0132 -0.0184 -0.0178

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 64 -780 +693

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -91 -281 -147

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1680 +0.0222 +0.0260 +0.0280 +0.0307 +0.0305
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1605 +0.0212 +0.0243 +0.0254 +0.0282 +0.0280
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1632 +0.0177 +0.0208 +0.0225 +0.0223
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1534 +0.0003 +0.0125 +0.0158 +0.0178 +0.0179
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1745 +0.0047 +0.0106 +0.0129 +0.0146 +0.0147
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1499 -0.0004 +0.0133 +0.0162 +0.0176 +0.0176
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1541 +0.0061 +0.0041 +0.0045 +0.0036 +0.0035
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5972 +0.0103 +0.0103
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2106 +0.0390 +0.0389

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0858 +0.0095 +0.0119 +0.0131 +0.0138 +0.0101
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0820 +0.0097 +0.0118 +0.0121 +0.0132 +0.0102
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0739 +0.0066 +0.0079 +0.0081 +0.0052
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0662 -0.0116 +0.0059 +0.0069 +0.0074 +0.0061
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0797 +0.0005 +0.0041 +0.0044 +0.0025 +0.0023
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0638 -0.0133 +0.0070 +0.0069 +0.0069 +0.0054
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1011 -0.0018 -0.0008 -0.0026 -0.0016 -0.0022
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5791 -0.0090 -0.0089
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1344 +0.0111 +0.0098

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0108 -0.0020 +0.0070 +0.0012 +0.0000 -0.0668
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0031 -0.0076 +0.0055 -0.0002 -0.0001 -0.0377
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0005 +0.0007 -0.0023 -0.0001 -0.0000 -0.0003
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0652 +0.0012 -0.0008 +0.0020 -0.0002 -0.0615
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0591 -0.0054 -0.0006 -0.0003 +0.0001 -0.0132
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0505 -0.0080 +0.0050 -0.0016 -0.0001 +0.0216
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1256 -0.0059 -0.0059 +0.0211 -0.0012 -0.1097
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0807 +0.0062 +0.0047 -0.0191 -0.0001 +0.0203
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1944 +0.0183 -0.0240 +0.0287 +0.0020 -0.0861
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1042 +0.0048 -0.0054 -0.0067 +0.0002 +0.0157
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0468 +0.0009 +0.0001 -0.0089 -0.0000 +0.0012
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2071 +0.0051 -0.0017 +0.0004 +0.0004 +0.0031
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1324 -0.0032 -0.0062 -0.0160 +0.0006 +0.1093
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0804 +0.0043 -0.0045 -0.0054 -0.0001 -0.0215
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0477 +0.0169 -0.0238 +0.0355 +0 -0.0488
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0200 +0.0009 +0.0076 -0.0005 +0.0006 -0.0540
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0019 -0.0089 +0.0045 +0.0004 +0.0011 -0.0403
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0168 +0.0054 -0.0044 +0.0010 +0.0033 +0.0099
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0599 +0.0013 +0.0005 -0.0055 +0.0004 -0.0611
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0573 -0.0060 -0.0005 -0.0005 -0.0005 -0.0123
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0509 -0.0084 +0.0078 -0.0007 +0.0020 +0.0179
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1522 -0.0077 -0.0028 +0.0144 -0.0004 -0.0685
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0757 +0.0048 +0.0016 -0.0170 -0.0057 +0.0257
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2436 +0.0504 -0.0481 +0.0073 +0.0089 -0.0307
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1029 +0.0031 -0.0032 -0.0081 +0.0006 +0.0264
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0445 +0.0011 -0.0008 -0.0084 -0.0000 +0.0025
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2193 +0.0036 -0.0008 +0.0016 +0.0018 +0.0143
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1149 +0.0005 -0.0096 -0.0297 +0.0070 +0.1034
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0813 +0.0056 -0.0034 -0.0033 +0.0038 -0.0310
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0571 +0.0405 -0.0089 +0.0322 +0.0276 -0.0878
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1419 +0.0343 +0.0202 -0.0086 +0.0005 -0.1664
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1233 +0.0169 -0.0058 +0.0004 +0.0004 -0.0870
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1254 +0.0117 -0.0078 +0.0011 -0.0001 -0.1353
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1405 +0.0441 -0.0007 -0.0136 +0.0007 -0.1582
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1325 +0.0164 -0.0031 -0.0002 +0.0007 -0.0874
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1336 +0.0170 -0.0063 +0.0017 +0.0006 -0.1350
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2012 +0.0445 +0.0761 -0.1281 +0.0017 -0.3714
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0437 -0.0103 +0.0134 -0.0147 -0.0018 -0.1057
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3032 -0.0030 +0.1483 +0.0078 -0.0120 -0.6423
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1882 +0.0037 +0.0045 +0.0051 +0.0002 -0.1624
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0430 +0.0676 -0.0087 -0.0168 +0.0006 -0.1093
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1840 +0.0316 +0.0062 -0.0049 +0.0001 -0.1514
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2366 -0.0093 +0.0378 -0.0706 +0.0033 -0.3435
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0637 +0.0977 -0.0155 +0.0159 +0.0001 -0.1843
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5856 +0.0737 +0.1982 -0.0827 -0.0008 -0.6888
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0586 +0.0149 -0.0182 -0.0054 +0.1015 -0.1637
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0394 +0.0035 +0.0005 +0.0043 +0.0189 -0.0609
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0548 -0.0157 -0.0104 +0.0083 +0.0352 -0.0926
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0541 -0.0042 +0.0002 -0.0084 +0.0711 -0.1366
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0391 +0.0032 -0.0030 +0.0035 +0.0313 -0.0638
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0531 +0.0000 +0.0073 -0.0081 +0.0305 -0.1028
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0492 +0.0146 +0.0452 -0.0355 +0.0761 -0.2546
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0151 -0.0057 -0.0062 -0.0031 +0.0154 -0.0489
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0560 -0.1294 +0.1626 +0.0090 +0.0813 -0.5258
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0327 -0.0046 +0.0074 +0.0016 +0.0039 -0.0403
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0101 +0.0109 -0.0066 +0.0090 -0.0065 -0.0267
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0393 -0.0053 +0.0093 +0.0025 +0.0083 -0.0513
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0906 -0.0166 +0.0170 -0.0166 +0.0315 -0.1584
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0231 +0.0068 -0.0006 -0.0039 +0.0560 -0.1067
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.2966 -0.0891 -0.0032 -0.0082 +0.0618 -0.1956
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 16.3400 -7.7300 -0.9800 -3.5300 -0.7900 -2.6900 -32.1147% -5.6582% -17.7655% -4.6118% -14.1356%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.3000 -3.4500 +0.2300 +0.9400 +0.0100 +1.1700 -27.0588% +2.5358% +11.2440% +0.1076% +14.3911%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.3100 -3 +0.3500 -0.3500 -1.5000 -0.4800 -24.3704% +3.9062% -3.6232% -13.8760% -4.9030%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.2000 -0.0300 -0.2100 -0.7400 -0.0800 -0.7092% -4.7619% -14.9798% -1.8692%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.0300 -0.3500 +0.6500 +0.2800 +0.4900 +0.4700 -6.5056% +14.8402% +5.8947% +10.7930% +10.3070%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.2100 -1.2200 +0.0700 -0.2300 -0.4500 -0.0300 -22.4678% +1.6908% -5.1802% -9.6567% -0.7075%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.2900 -1.2600 -0.1300 -0.2400 -0.1700 -0.2500 -22.7027% -2.9412% -5.2980% -3.8117% -5.5066%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 15.0800 -12.5800 -4.6800 -3.2400 -4.2000 -2.8200 -45.4808% -23.6842% -17.6856% -21.7842% -15.7542%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.5600 -1.2300 -0.0300 -0.0900 +0.4700 +0.2000 -21.2435% -0.6536% -1.9355% +11.4914% +4.5872%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 4.8900 -1.3700 +0.4900 -0.9900 -0.1200 -21.8850% +11.1364% -16.8367% -2.3952%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.5800 +0.0600 +0.8500 -0.2200 +0.9400 +0.7500 +1.3274% +22.7882% -4.5833% +25.8242% +19.5822%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.0400 -1.7000 +0.5300 +0.1200 +0.6000 +0.3200 -29.6167% +15.0997% +3.0612% +17.4419% +8.6022%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.0600 -1.0100 +0.5300 +0.5500 +0.3200 +0.5900 -14.2857% +9.5841% +9.9819% +5.5749% +10.7861%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 5.8000 -1.7900 +0.0700 -0.3400 +0.2600 -0.0900 -23.5837% +1.2216% -5.5375% +4.6931% -1.5280%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 4.6700 -1.7800 +0 +0.3700 +0.2600 +0.2500 -27.5969% +0% +8.6047% +5.8957% +5.6561%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6 -1.3800 +1.0700 +1.3700 +0.3800 +1.0400 -18.6992% +21.7039% +29.5896% +6.7616% +20.9677%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.6900 -0.0500 +1.0300 +1.3000 +1.1000 -1.0549% +28.1421% +38.3481% +30.6407%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.5900 -0.6700 +0.7500 +0.8300 +0.5300 -12.7376% +19.5312% +22.0745% +13.0542%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 3.9500 -0.7000 +0.5200 +0.2400 +0.5000 +0.4000 -15.0538% +15.1603% +6.4690% +14.4928% +11.2676%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.2900 +0.1200 +1 +0.6000 +1.0200 +0.7700 +2.8777% +30.3951% +16.2602% +31.1927% +21.8750%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.1900 -1.0900 +0.6600 +0.5900 +0.7000 +0.4900 -20.6439% +18.6969% +16.3889% +20.0573% +13.2432%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.7800 -0.7300 +0.9600 +0.6300 -0.0300 +0.7500 -13.2486% +25.1309% +15.1807% -0.6237% +18.6104%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.2800 -0.4500 +0.8200 +0.7100 +0.5100 -9.5137% +23.6994% +19.8880% +13.5279%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.5200 -0.1300 +0.9000 +0.7900 +0.7400 +1.0200 -2.7957% +24.8619% +21.1796% +19.5767% +29.1429%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 6.9100 -2.1300 +0.3600 +0.8100 -0.3000 -23.5619% +5.4962% +13.2787% -4.1609%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.7400 +1.2700 +1.6000 +0.1600 +0.5200 +28.4116% +38.6473% +2.8674% +9.9617%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 22.2000 -3.9800 -2.0800 -15.2024% -8.5667%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.8900 -0.0200 +0.4700 -0.1549% +3.7842%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 13.8800 +1.8200 -0.5300 +15.0912% -3.6780%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 31.1200 +3.6100 +2.8400 +13.1225% +10.0424%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 34.0400 +6.3700 +5.5400 +23.0213% +19.4386%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png