Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1342987 +246493 +35982 +31032 +49446 +49446 +22.4801% +2.7530% +2.3653% +3.8225% +3.8225%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 655884 +69562 +40122 +45174 +56003 +56003 +11.8641% +6.5158% +7.3970% +9.3357% +9.3357%
MTAC_3P_Standard 596590 623022 617574 607435 607435 661448 +64858 +38426 +43874 +54013 +54013 +10.8715% +6.1677% +7.1042% +8.8920% +8.8920%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 155273 +17725 +18434 +19713 +19713 +12.8864% +13.4713% +14.5419% +14.5419%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 174378 +18737 +17827 +17869 +19343 +19534 +12.0386% +11.3873% +11.4172% +12.4765% +12.6153%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 156301 +17792 +16916 +17009 +18416 +18514 +12.8454% +12.1362% +12.2110% +13.3561% +13.4367%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 176568 +17606 +17836 +17408 +18646 +18646 +11.0756% +11.2365% +10.9374% +11.8071% +11.8071%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1336100 +313364 +181431 +212227 +152016 +152016 +30.6398% +15.7128% +18.8835% +12.8383% +12.8383%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 55439 +14557 +13739 +13014 +13339 +13339 +35.6074% +32.9472% +30.6753% +31.6841% +31.6841%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 52996 +11927 +10594 +10973 +11844 +11844 +29.0414% +24.9847% +26.1119% +28.7811% +28.7811%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 43310 +34570 +20195 +20295 +20397 +20397 +395.5378% +87.3675% +88.1816% +89.0193% +89.0193%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 30794 +13859 +13241 +12385 +12446 +12446 +81.8364% +75.4344% +67.2769% +67.8330% +67.8330%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 119392 +19484 +16501 +20409 +20744 +20744 +19.5019% +16.0374% +20.6187% +21.0283% +21.0283%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 87670 +16572 +14942 +16225 +16544 +16544 +23.3087% +20.5450% +22.7098% +23.2601% +23.2601%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 126573 +20869 +20076 +20951 +22139 +22061 +19.7429% +18.8512% +19.8358% +21.1990% +21.1086%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 134048 +18891 +16732 +19726 +20967 +20798 +16.4046% +14.2623% +17.2548% +18.5416% +18.3647%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 19990 +9796 +9184 +8752 +8757 +8757 +96.0957% +84.9898% +77.8786% +77.9578% +77.9578%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 20664 +5857 +5231 +4623 +4965 +4965 +39.5556% +33.8949% +28.8199% +31.6262% +31.6262%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8737 +7476 +6705 +6287 +6351 +6351 +592.8628% +329.9705% +256.6122% +266.1777% +266.1777%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 15315 +13879 +10532 +9625 +9584 +9584 +966.5042% +220.1965% +169.1564% +167.2308% +167.2308%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 32278 +10568 +10383 +9698 +9815 +9815 +48.6780% +47.4218% +42.9495% +43.6941% +43.6941%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 32609 +6749 +6466 +6349 +6984 +6984 +26.0982% +24.7332% +24.1775% +27.2546% +27.2546%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20080 +16596 +13182 +13246 +13246 +476.3490% +191.0989% +193.8250% +193.8250%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 28666 +17967 +17192 +15784 +15777 +15777 +167.9316% +149.8344% +122.5276% +122.4067% +122.4067%
SCP_Astral_MBR 92167 93585 91884 90864 90838 112303 +20136 +18718 +20419 +21439 +21465 +21.8473% +20.0011% +22.2226% +23.5946% +23.6300%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 60082 +3383 +4289 +4191 +4191 +5.9666% +7.6873% +7.4985% +7.4985%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1922733 +146605 +147387 +8.2542% +8.3019%
EWZ_2P_MBR_Exploris_Human 836809 836809 904779 +67970 +67970 +8.1225% +8.1225%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1008281 +93357 +94332 +10.2038% +10.3214%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2300268 +222234 +222232 +10.6944% +10.6943%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2300268 +222234 +222232 +10.6944% +10.6943%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 150919 +39415 +17300 +19560 +18888 +18888 +35.3485% +12.9473% +14.8905% +14.3057% +14.3057%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 126681 +18414 +9329 +12022 +11865 +11865 +17.0080% +7.9496% +10.4850% +10.3339% +10.3339%
MTAC_3P_Standard 110265 118693 115800 116148 116148 127292 +17027 +8599 +11492 +11144 +11144 +15.4419% +7.2447% +9.9240% +9.5947% +9.5947%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 58452 +9594 +9420 +9457 +9457 +19.6365% +19.2119% +19.3020% +19.3020%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 64920 +10951 +9845 +9080 +9036 +9099 +20.2913% +17.8756% +16.2607% +16.1692% +16.3003%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 59109 +10488 +9444 +8820 +8649 +8694 +21.5709% +19.0154% +17.5386% +17.1403% +17.2449%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 65559 +10499 +9640 +8852 +8732 +8732 +19.0683% +17.2392% +15.6101% +15.3659% +15.3659%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 73831 +22559 +15047 +18784 +15238 +15266 +43.9987% +25.5971% +34.1236% +26.0065% +26.0668%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21322 +6882 +6364 +6073 +5615 +5615 +47.6593% +42.5458% +39.8256% +35.7484% +35.7484%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20086 +5603 +5021 +5170 +5016 +5014 +38.6867% +33.3289% +34.6608% +33.2847% +33.2670%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 17773 +9033 +8397 +8384 +8409 +8388 +103.3524% +89.5584% +89.2960% +89.8014% +89.3767%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17643 +8745 +8384 +7859 +7833 +7833 +98.2805% +90.5497% +80.3250% +79.8471% +79.8471%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 43499 +8634 +7202 +9157 +9074 +9074 +24.7641% +19.8419% +26.6641% +26.3588% +26.3588%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32241 +7592 +6775 +7122 +7018 +7018 +30.8004% +26.6041% +28.3530% +27.8238% +27.8238%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 47029 +10341 +9353 +9380 +9608 +9570 +28.1863% +24.8248% +24.9143% +25.6754% +25.5479%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 48767 +8611 +7222 +8724 +8874 +8821 +21.4439% +17.3836% +21.7866% +22.2445% +22.0823%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8146 +4480 +4197 +3937 +3900 +3900 +122.2040% +106.2801% +93.5377% +91.8512% +91.8512%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8140 +2841 +2529 +2285 +2074 +2073 +53.6139% +45.0722% +39.0265% +34.1906% +34.1685%
SCP_Astral_250pg_3ms 675 721 908 879 879 4168 +3493 +3447 +3260 +3289 +3289 +517.4815% +478.0860% +359.0308% +374.1752% +374.1752%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6436 +5000 +4698 +4291 +4273 +4271 +348.1894% +270.3107% +200.0466% +197.5497% +197.2748%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12918 +5124 +4946 +4666 +4512 +4510 +65.7429% +62.0421% +56.5439% +53.6759% +53.6394%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12513 +3355 +3171 +3142 +3099 +3098 +36.6346% +33.9435% +33.5290% +32.9191% +32.9049%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8809 +6963 +6209 +6223 +6220 +377.1939% +238.8077% +240.6419% +240.2472%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 11675 +7801 +7520 +6901 +6870 +6871 +201.3681% +180.9868% +144.5538% +142.9761% +143.0266%
SCP_Astral_MBR 24110 24991 24570 24544 24527 31046 +6936 +6055 +6476 +6502 +6519 +28.7681% +24.2287% +26.3573% +26.4912% +26.5789%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 60082 +3383 +4289 +4191 +4191 +5.9666% +7.6873% +7.4985% +7.4985%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 62867 +7596 +7720 +13.7432% +13.9989%
EWZ_2P_MBR_Exploris_Human 48465 48473 54802 +6337 +6329 +13.0754% +13.0568%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 58757 +7511 +7580 +14.6568% +14.8113%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 79716 +6438 +6439 +8.7857% +8.7872%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 79716 +6438 +6439 +8.7857% +8.7872%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91878 +3958 -1010 -2104 -1563 -2408 +4.5018% -1.0873% -2.2387% -1.6727% -2.5539%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67443 +3670 +3469 +3832 +4428 +1608 +5.7548% +5.4225% +6.0241% +7.0269% +2.4425%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68144 +3827 +3680 +3925 +4759 +2177 +5.9502% +5.7086% +6.1119% +7.5081% +3.3001%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12978 +911 +1008 +1038 +739 +7.5495% +8.4211% +8.6935% +6.0381%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13295 +863 +824 +933 +967 +635 +6.9418% +6.6073% +7.5473% +7.8439% +5.0158%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12863 +855 +816 +903 +895 +683 +7.1203% +6.7735% +7.5502% +7.4783% +5.6076%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13372 +811 +907 +895 +962 +598 +6.4565% +7.2764% +7.1732% +7.7518% +4.6814%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 160182 +13958 +6648 +6192 +4355 +2896 +9.5456% +4.3300% +4.0210% +2.7948% +1.8412%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11936 +2773 +2408 +2351 +2602 +1914 +30.2630% +25.2729% +24.5279% +27.8766% +19.0980%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11580 +2282 +1819 +2168 +2027 +1591 +24.5429% +18.6354% +23.0344% +21.2185% +15.9275%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9830 +7380 +3746 +3583 +3714 +3481 +301.2245% +61.5713% +57.3555% +60.7260% +54.8275%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6719 +2016 +2131 +1761 +1796 +1770 +42.8663% +46.4473% +35.5184% +36.4818% +35.7648%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17768 +1578 +1488 +1743 +1713 +1232 +9.7468% +9.1400% +10.8768% +10.6696% +7.4504%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15166 +1567 +1325 +1478 +1495 +1182 +11.5229% +9.5730% +10.7978% +10.9356% +8.4525%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18100 +1848 +1824 +1983 +2175 +1642 +11.3709% +11.2067% +12.3038% +13.6578% +9.9769%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18662 +1645 +1484 +1749 +1917 +1313 +9.6668% +8.6390% +10.3412% +11.4482% +7.5682%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5680 +2033 +1767 +1816 +2141 +1866 +55.7444% +45.1572% +46.9979% +60.4973% +48.9250%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6093 +1793 +1490 +1296 +1116 +924 +41.6977% +32.3702% +27.0169% +22.4231% +17.8758%
SCP_Astral_250pg_3ms 576 22 936 741 736 3056 +2480 +3034 +2120 +2315 +2320 +430.5556% +13790.9091% +226.4957% +312.4157% +315.2174%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4378 +3741 +2298 +2349 +2332 +2310 +587.2841% +110.4808% +115.7713% +113.9785% +111.7021%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7898 +1653 +1552 +1882 +1771 +1679 +26.4692% +24.4564% +31.2832% +28.9048% +26.9979%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8256 +1534 +1527 +1244 +1233 +914 +22.8206% +22.6928% +17.7410% +17.5566% +12.4489%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5436 +4454 +3071 +3259 +3200 +453.5642% +129.8520% +149.7014% +143.1127%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7523 +3815 +3516 +3478 +3605 +3420 +102.8857% +87.7464% +85.9827% +92.0112% +83.3536%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21279 +1114 +1150 +1205 +1486 +1381 +5.5244% +5.7132% +6.0028% +7.5077% +6.9404%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4991 +306 +291 +359 +252 +6.5315% +6.1915% +7.7504% +5.3176%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 251265 +6006 +3843 +2.4488% +1.5532%
EWZ_2P_MBR_Exploris_Human 115447 117345 117078 +1631 -267 +1.4128% -0.2275%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 133964 +4996 +3258 +3.8738% +2.4926%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 190205 +12031 +6662 +6.7524% +3.6297%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 190205 +12031 +6662 +6.7524% +3.6297%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8480 +635 +305 +325 +277 +231 +8.0943% +3.7309% +3.9853% +3.3768% +2.8003%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12251 +890 +757 +900 +913 +453 +7.8338% +6.5860% +7.9288% +8.0526% +3.8396%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12376 +903 +816 +899 +980 +544 +7.8707% +7.0588% +7.8331% +8.5995% +4.5977%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4504 +376 +412 +404 +321 +9.1085% +10.0684% +9.8537% +7.6739%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4584 +369 +336 +366 +370 +247 +8.7544% +7.9096% +8.6771% +8.7803% +5.6952%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4438 +363 +304 +348 +341 +253 +8.9080% +7.3537% +8.5086% +8.3232% +6.0454%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4586 +337 +349 +342 +355 +232 +7.9313% +8.2370% +8.0584% +8.3905% +5.3284%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8125 +870 +543 +785 +646 +588 +11.9917% +7.1617% +10.6948% +8.6375% +7.8015%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4338 +1093 +949 +927 +1020 +777 +33.6826% +28.0024% +27.1768% +30.7414% +21.8197%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4166 +912 +733 +875 +732 +674 +28.0270% +21.3516% +26.5877% +21.3162% +19.3013%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3733 +1283 +1337 +1283 +1336 +1299 +52.3673% +55.8013% +52.3673% +55.7363% +53.3689%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3637 +1129 +1201 +1003 +995 +1054 +45.0159% +49.3021% +38.0790% +37.6609% +40.8053%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6204 +625 +548 +700 +658 +550 +11.2027% +9.6888% +12.7180% +11.8644% +9.7276%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5332 +611 +494 +549 +521 +488 +12.9422% +10.2108% +11.4782% +10.8293% +10.0743%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6387 +776 +732 +791 +834 +674 +13.8300% +12.9443% +14.1351% +15.0189% +11.7977%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6518 +672 +569 +675 +713 +553 +11.4950% +9.5646% +11.5523% +12.2825% +9.2707%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2143 +851 +719 +737 +855 +784 +65.8669% +50.4916% +52.4182% +66.3820% +57.6895%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2275 +707 +615 +517 +402 +405 +45.0893% +37.0482% +29.4084% +21.4629% +21.6578%
SCP_Astral_250pg_3ms 307 8 350 283 281 1318 +1011 +1310 +968 +1035 +1037 +329.3160% +16375% +276.5714% +365.7244% +369.0391%
SCP_Astral_250pg_6ms 637 756 751 766 767 1674 +1037 +918 +923 +908 +907 +162.7943% +121.4286% +122.9028% +118.5379% +118.2529%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2881 +674 +606 +712 +651 +664 +30.5392% +26.6374% +32.8262% +29.1928% +29.9504%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3030 +627 +642 +553 +491 +432 +26.0924% +26.8844% +22.3254% +19.3383% +16.6282%
SCP_Astral_500pg_3ms 525 902 828 835 2115 +1590 +1213 +1287 +1280 +302.8571% +134.4789% +155.4348% +153.2934%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2822 +1504 +1375 +1336 +1387 +1354 +114.1123% +95.0242% +89.9058% +96.6551% +92.2343%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5178 +470 +458 +466 +463 +462 +9.9830% +9.7034% +9.8896% +9.8197% +9.7964%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4991 +306 +291 +359 +252 +6.5315% +6.1915% +7.7504% +5.3176%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7415 +374 +309 +5.3117% +4.3484%
EWZ_2P_MBR_Exploris_Human 6167 6284 6369 +202 +85 +3.2755% +1.3526%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7381 +494 +418 +7.1729% +6.0032%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6320 +516 +365 +8.8904% +6.1293%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6320 +516 +365 +8.8904% +6.1293%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91863 -2416
MTAC_3P_Alternating 65832 67442 +1610
MTAC_3P_Standard 65967 68141 +2174
MTAC_Yeast_Alternating_3min 12239 12970 +731
MTAC_Yeast_Alternating_5min 12660 13285 +625
MTAC_Yeast_Standard_3min 12180 12856 +676
MTAC_Yeast_Standard_5min 12772 13365 +593
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 160176 +2891
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11928 +1906
SCP_Astral_1000pg_24ms 9989 11576 +1587
SCP_Astral_1000pg_3ms 6349 9824 +3475
SCP_Astral_1000pg_6ms 4949 6709 +1760
SCP_Astral_10ng_12ms 16536 17763 +1227
SCP_Astral_10ng_24ms 13982 15166 +1184
SCP_Astral_10ng_3ms 16458 18092 +1634
SCP_Astral_10ng_6ms 17349 18660 +1311
SCP_Astral_250pg_12ms 3814 5679 +1865
SCP_Astral_250pg_24ms 5169 6093 +924
SCP_Astral_250pg_3ms 736 3055 +2319
SCP_Astral_250pg_6ms 2066 4378 +2312
SCP_Astral_500pg_12ms 6219 7897 +1678
SCP_Astral_500pg_24ms 7342 8256 +914
SCP_Astral_500pg_3ms 2234 5434 +3200
SCP_Astral_500pg_6ms 4103 7522 +3419
SCP_Astral_MBR 19891 21279 +1388
Seer_Astral_45 242898
Seer_Astral_single 4739 4991 +252
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 251241 +3819
EWZ_2P_MBR_Exploris_Human 117340 117069 -271
EWZ_2P_MBR_Exploris_YeastHuman 130702 133955 +3253
MacCoss_Eclipse_Normalization_noNorm 183540 190198 +6658
MacCoss_Eclipse_Normalization_yesNorm 183540 190198 +6658

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0008 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0002 +0.0005 +0.0005
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0003 +0.0002 -0.0002 +0.0007 +0.0005 +0.0005
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0005 +0.0009 -0.0010 +0.0001 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0002 +0.0014 +0.0017 +0.0025 +0.0025
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0005 -0.0001 +0.0007 +0.0009 +0.0010 +0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 0.0000 +0.0019 +0.0014 +0.0012 +0.0020 +0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0004 +0.0014 +0.0023 +0.0028 +0.0029
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0000 -0.0006 -0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0009 +0.0010 +0.0006 +0.0020 +0.0004 +0.0004
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0000 +0.0023 +0.0030 +0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0018 +0.0072 +0.0051 +0.0050 +0.0064 +0.0064
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0029 +0.0059 +0.0077 +0.0059 +0.0068 +0.0075
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0009 +0.0011 +0.0020 +0.0044 +0.0035 +0.0035
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0000 +0.0022 +0.0017 +0.0024 +0.0024
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0014 +0.0034 +0.0005 +0.0029 +0.0027 +0.0027
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0008 +0.0033 +0.0035 +0.0027 +0.0026 +0.0026
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0001 +0.0009 +0.0000 +0.0023 +0.0013 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0022 +0.0061 +0.0062 +0.0019 +0.0074 +0.0074
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0006 -0.0004 +0.0006 +0.0018 +0.0025 +0.0025
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0033 +0.0102 +0.0033 +0.0033
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0039 +0.0090 +0.0065 +0.0088 +0.0083
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0004 +0.0018 +0.0006 +0.0024 +0.0022 +0.0022
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0012 +0.0025 +0.0036 +0.0024 +0.0023 +0.0023
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0021 +0.0034 +0.0044 +0.0056 +0.0056
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0048 +0.0079 +0.0081 +0.0063 +0.0063
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0007 +0.0019 +0.0012 +0.0007 +0.0015 +0.0015
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0006 +0.0028 +0.0028
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0016 +0.0010 +0.0012
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 0.0000 +0.0029 +0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0020 -0.0010 -0.0009 -0.0025 -0.0027 -0.0009
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0011 +0.0002 +0.0014 +0.0018 +0.0014 +0.0032
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 0.0016 +0.0082 +0.0069 +0.0064 +0.0060
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0029 +0.0070 +0.0067 +0.0077 +0.0063 +0.0086
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0045 +0.0013 +0.0003 -0.0025 -0.0017 -0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0013 +0.0049 +0.0059 +0.0069 +0.0068
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0002 +0.0001 +0.0029
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0017 +0.0013 -0.0015 +0.0012 -0.0008 +0.0001
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0005 +0.0044 +0.0036 +0.0037 +0.0035
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0008 +0.0062 +0.0050 +0.0062 +0.0062 +0.0075
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0019 +0.0078 +0.0078 +0.0091 +0.0091 +0.0106
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0055 +0.0073 +0.0104 +0.0098 +0.0100 +0.0101
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0041 +0.0013 -0.0002 +0.0012 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 0.0008 +0.0040 +0.0031 +0.0024 +0.0053 +0.0044
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0026 +0.0063 +0.0100 +0.0093 +0.0087 +0.0087
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0026 +0.0029 -0.0006 +0.0028 +0.0020 +0.0023
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0012 +0.0065 +0.0088 +0.0046 +0.0075 +0.0073
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0005 +0.0037 +0.0037 +0.0021 +0.0008 +0.0037
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0000 +0.0028 -0.0000 +0.0085 -0.0000 -0.0000
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0078 +0.0177 +0.0144 +0.0162 +0.0166 +0.0166
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0020 +0.0016 +0.0019 -0.0034 +0.0000 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0004 +0.0024 +0.0005 +0.0055 +0.0065 +0.0064
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0056 +0.0097 -0.0015 +0.0036 +0.0057 +0.0058
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0113 +0.0157 +0.0158 +0.0120 +0.0168 +0.0155
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0010 +0.0070 +0.0040 +0.0036 +0.0061 +0.0067
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0010 +0.0084 +0.0083
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0003 +0.0010 +0.0010
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0000 +0.0003 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0002 +0.0003 -0.0001 +0.0004 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0001 +0.0009 -0.0001 +0.0004 +0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0001 +0.0009 +0.0012 +0.0013 +0.0013
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0000 +0.0003 +0.0007 +0.0009 +0.0008 +0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0002 +0.0010 +0.0009 +0.0010 +0.0012 +0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0008 +0.0016 +0.0018 +0.0022 +0.0022
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0007 +0.0004 +0.0004
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0012 +0.0016 +0.0007 +0.0018 +0.0012 +0.0012
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0001 +0.0017 +0.0031 +0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0016 +0.0062 +0.0044 +0.0047 +0.0053 +0.0053
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0030 +0.0050 +0.0059 +0.0055 +0.0056 +0.0064
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0016 +0.0014 +0.0022 +0.0043 +0.0040 +0.0040
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0002 +0.0018 +0.0012 +0.0018 +0.0018
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0007 +0.0021 +0.0004 +0.0019 +0.0015 +0.0015
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0008 +0.0027 +0.0028 +0.0023 +0.0022 +0.0022
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0000 +0.0005 -0.0003 +0.0012 +0.0008 +0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0028 +0.0058 +0.0055 +0.0031 +0.0060 +0.0060
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0001 +0.0006 +0.0007 +0.0012 +0.0013 +0.0013
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0024 +0.0083 +0.0024 +0.0024
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0034 +0.0070 +0.0055 +0.0064 +0.0064
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0004 +0.0023 +0.0008 +0.0024 +0.0018 +0.0018
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0019 +0.0035 +0.0036 +0.0037 +0.0036 +0.0036
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0028 +0.0009 +0.0032 +0.0044 +0.0044
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0058 +0.0083 +0.0077 +0.0068 +0.0068
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0008 +0.0025 +0.0023 +0.0016 +0.0021 +0.0021
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0006 +0.0028 +0.0028
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0007 +0.0018 +0.0020
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0004 +0.0012 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0004 -0.0003 -0.0002 -0.0007 -0.0007 +0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0003 +0.0005 +0.0010 +0.0017 +0.0015 +0.0020
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0022 +0.0058 +0.0055 +0.0051 +0.0043
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0019 +0.0056 +0.0040 +0.0043 +0.0032 +0.0044
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0025 +0.0013 +0.0010 -0.0012 -0.0010 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0011 +0.0034 +0.0038 +0.0048 +0.0045
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0000 +0.0004 +0.0021
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0013 +0.0013 -0.0020 +0.0004 +0.0003 +0.0006
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0002 +0.0035 +0.0021 +0.0030 +0.0038
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0002 +0.0051 +0.0058 +0.0060 +0.0045 +0.0062
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0016 +0.0059 +0.0048 +0.0056 +0.0046 +0.0080
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0041 +0.0066 +0.0076 +0.0082 +0.0081 +0.0074
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0032 +0.0016 -0.0001 +0.0010 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 0.0006 +0.0038 +0.0020 +0.0021 +0.0032 +0.0037
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0016 +0.0038 +0.0062 +0.0054 +0.0049 +0.0056
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0019 +0.0020 +0.0000 +0.0019 +0.0011 +0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0009 +0.0030 +0.0032 +0.0011 +0.0022 +0.0036
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0000 +0.0013 +0.0032 +0.0003 +0.0001 +0.0029
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0017 +0.0043 +0.0065 +0.0030 -0.0017 -0.0017
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0054 +0.0154 +0.0122 +0.0109 +0.0101 +0.0102
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0006 +0.0046 +0.0041 +0.0013 +0.0033 +0.0028
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0013 +0.0032 +0.0012 +0.0056 +0.0057 +0.0080
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0056 +0.0088 -0.0011 +0.0027 +0.0052 +0.0053
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0104 +0.0124 +0.0126 +0.0095 +0.0132 +0.0122
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0006 +0.0029 +0.0023 +0.0028 +0.0034 +0.0046
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0014 +0.0088 +0.0083
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 9673 -14722 -14915

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 360 -411 -402

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0372 +0.0056 +0.0062

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 223 -621 +852

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -29 -219 -85

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1692 +0.0233 +0.0271 +0.0292 +0.0318 +0.0317
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1628 +0.0235 +0.0266 +0.0277 +0.0304 +0.0303
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1655 +0.0200 +0.0231 +0.0247 +0.0246
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1540 +0.0009 +0.0131 +0.0164 +0.0184 +0.0185
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1755 +0.0057 +0.0116 +0.0140 +0.0156 +0.0157
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1514 +0.0011 +0.0148 +0.0177 +0.0191 +0.0190
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1544 +0.0064 +0.0045 +0.0048 +0.0039 +0.0038
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5964 +0.0095 +0.0095
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2130 +0.0413 +0.0412

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0858 +0.0095 +0.0119 +0.0131 +0.0138 +0.0100
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0815 +0.0092 +0.0112 +0.0116 +0.0127 +0.0097
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0751 +0.0078 +0.0091 +0.0093 +0.0064
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0664 -0.0114 +0.0061 +0.0072 +0.0076 +0.0063
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0798 +0.0005 +0.0041 +0.0044 +0.0025 +0.0023
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0640 -0.0130 +0.0073 +0.0072 +0.0072 +0.0057
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1017 -0.0011 -0.0002 -0.0019 -0.0010 -0.0016
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5782 -0.0099 -0.0098
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1369 +0.0136 +0.0123

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0140 -0.0020 +0.0070 +0.0012 +0.0000 -0.0637
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0045 -0.0076 +0.0055 -0.0002 -0.0001 -0.0362
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0011 +0.0007 -0.0023 -0.0001 -0.0000 +0.0003
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0610 +0.0012 -0.0008 +0.0020 -0.0002 -0.0656
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0611 -0.0054 -0.0006 -0.0003 +0.0001 -0.0112
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0533 -0.0080 +0.0050 -0.0016 -0.0001 +0.0244
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1277 -0.0059 -0.0059 +0.0211 -0.0012 -0.1076
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0821 +0.0062 +0.0047 -0.0191 -0.0001 +0.0217
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1834 +0.0183 -0.0240 +0.0287 +0.0020 -0.0971
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1046 +0.0048 -0.0054 -0.0067 +0.0002 +0.0162
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0467 +0.0009 +0.0001 -0.0089 -0.0000 +0.0011
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2072 +0.0051 -0.0017 +0.0004 +0.0004 +0.0032
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1356 -0.0032 -0.0062 -0.0160 +0.0006 +0.1125
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0794 +0.0043 -0.0045 -0.0054 -0.0001 -0.0225
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0452 +0.0169 -0.0238 +0.0355 +0 -0.0512
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0213 +0.0009 +0.0076 -0.0005 +0.0006 -0.0526
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0033 -0.0089 +0.0045 +0.0004 +0.0011 -0.0389
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0058 +0.0054 -0.0044 +0.0010 +0.0033 -0.0010
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0565 +0.0013 +0.0005 -0.0055 +0.0004 -0.0645
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0613 -0.0060 -0.0005 -0.0005 -0.0005 -0.0084
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0533 -0.0084 +0.0078 -0.0007 +0.0020 +0.0203
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1543 -0.0077 -0.0028 +0.0144 -0.0004 -0.0664
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0783 +0.0048 +0.0016 -0.0170 -0.0057 +0.0284
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2364 +0.0504 -0.0481 +0.0073 +0.0089 -0.0380
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1033 +0.0031 -0.0032 -0.0081 +0.0006 +0.0268
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0443 +0.0011 -0.0008 -0.0084 -0.0000 +0.0022
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2184 +0.0036 -0.0008 +0.0016 +0.0018 +0.0133
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1083 +0.0005 -0.0096 -0.0297 +0.0070 +0.0967
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0812 +0.0056 -0.0034 -0.0033 +0.0038 -0.0311
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0419 +0.0405 -0.0089 +0.0322 +0.0276 -0.1030
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1385 +0.0343 +0.0202 -0.0086 +0.0005 -0.1698
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1229 +0.0169 -0.0058 +0.0004 +0.0004 -0.0874
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1305 +0.0117 -0.0078 +0.0011 -0.0001 -0.1302
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1472 +0.0441 -0.0007 -0.0136 +0.0007 -0.1515
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1360 +0.0164 -0.0031 -0.0002 +0.0007 -0.0840
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1451 +0.0170 -0.0063 +0.0017 +0.0006 -0.1235
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2159 +0.0445 +0.0761 -0.1281 +0.0017 -0.3566
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0434 -0.0103 +0.0134 -0.0147 -0.0018 -0.1060
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2814 -0.0030 +0.1483 +0.0078 -0.0120 -0.6641
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1849 +0.0037 +0.0045 +0.0051 +0.0002 -0.1657
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0434 +0.0676 -0.0087 -0.0168 +0.0006 -0.1089
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1865 +0.0316 +0.0062 -0.0049 +0.0001 -0.1489
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2228 -0.0093 +0.0378 -0.0706 +0.0033 -0.3572
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0612 +0.0977 -0.0155 +0.0159 +0.0001 -0.1868
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5900 +0.0737 +0.1982 -0.0827 -0.0008 -0.6844
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0602 +0.0149 -0.0182 -0.0054 +0.1015 -0.1621
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0397 +0.0035 +0.0005 +0.0043 +0.0189 -0.0606
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0465 -0.0157 -0.0104 +0.0083 +0.0352 -0.1009
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0520 -0.0042 +0.0002 -0.0084 +0.0711 -0.1387
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0398 +0.0032 -0.0030 +0.0035 +0.0313 -0.0631
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0577 +0.0000 +0.0073 -0.0081 +0.0305 -0.0981
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0513 +0.0146 +0.0452 -0.0355 +0.0761 -0.2524
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0197 -0.0057 -0.0062 -0.0031 +0.0154 -0.0443
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0652 -0.1294 +0.1626 +0.0090 +0.0813 -0.5166
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0341 -0.0046 +0.0074 +0.0016 +0.0039 -0.0389
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0097 +0.0109 -0.0066 +0.0090 -0.0065 -0.0271
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0400 -0.0053 +0.0093 +0.0025 +0.0083 -0.0506
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0634 -0.0166 +0.0170 -0.0166 +0.0315 -0.1856
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0229 +0.0068 -0.0006 -0.0039 +0.0560 -0.1069
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1675 -0.0891 -0.0032 -0.0082 +0.0618 -0.3248
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 17.0500 -7.0200 -0.2700 -2.8200 -0.0800 -1.9800 -29.1649% -1.5589% -14.1922% -0.4670% -10.4046%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.3500 -3.4000 +0.2800 +0.9900 +0.0600 +1.2200 -26.6667% +3.0871% +11.8421% +0.6459% +15.0062%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.2400 -3.0700 +0.2800 -0.4200 -1.5700 -0.5500 -24.9391% +3.1250% -4.3478% -14.5236% -5.6180%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.0100 +0.7800 +0.6000 +0.0700 +0.7300 +18.4397% +13.6054% +1.4170% +17.0561%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.5600 +0.1800 +1.1800 +0.8100 +1.0200 +1 +3.3457% +26.9406% +17.0526% +22.4670% +21.9298%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.8900 -0.5400 +0.7500 +0.4500 +0.2300 +0.6500 -9.9448% +18.1159% +10.1351% +4.9356% +15.3302%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.3600 -0.1900 +0.9400 +0.8300 +0.9000 +0.8200 -3.4234% +21.2670% +18.3223% +20.1794% +18.0617%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 14.4500 -13.2100 -5.3100 -3.8700 -4.8300 -3.4500 -47.7585% -26.8725% -21.1245% -25.0519% -19.2737%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.0600 -0.7300 +0.4700 +0.4100 +0.9700 +0.7000 -12.6079% +10.2397% +8.8172% +23.7164% +16.0550%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.5200 -0.7400 +1.1200 -0.3600 +0.5100 -11.8211% +25.4545% -6.1224% +10.1796%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.1500 +0.6300 +1.4200 +0.3500 +1.5100 +1.3200 +13.9381% +38.0697% +7.2917% +41.4835% +34.4648%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.1200 -1.6200 +0.6100 +0.2000 +0.6800 +0.4000 -28.2230% +17.3789% +5.1020% +19.7674% +10.7527%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.3600 -0.7100 +0.8300 +0.8500 +0.6200 +0.8900 -10.0424% +15.0090% +15.4265% +10.8014% +16.2706%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 5.8000 -1.7900 +0.0700 -0.3400 +0.2600 -0.0900 -23.5837% +1.2216% -5.5375% +4.6931% -1.5280%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.6100 -0.8400 +0.9400 +1.3100 +1.2000 +1.1900 -13.0233% +20.1285% +30.4651% +27.2109% +26.9231%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.5700 -0.8100 +1.6400 +1.9400 +0.9500 +1.6100 -10.9756% +33.2657% +41.9006% +16.9039% +32.4597%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.5500 -0.1900 +0.8900 +1.1600 +0.9600 -4.0084% +24.3169% +34.2183% +26.7409%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.4300 -0.8300 +0.5900 +0.6700 +0.3700 -15.7795% +15.3646% +17.8191% +9.1133%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.0800 -0.5700 +0.6500 +0.3700 +0.6300 +0.5300 -12.2581% +18.9504% +9.9730% +18.2609% +14.9296%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.7000 +0.5300 +1.4100 +1.0100 +1.4300 +1.1800 +12.7098% +42.8571% +27.3713% +43.7309% +33.5227%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.3800 -0.9000 +0.8500 +0.7800 +0.8900 +0.6800 -17.0455% +24.0793% +21.6667% +25.5014% +18.3784%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.6100 -0.9000 +0.7900 +0.4600 -0.2000 +0.5800 -16.3339% +20.6806% +11.0843% -4.1580% +14.3921%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.4800 -0.2500 +1.0200 +0.9100 +0.7100 -5.2854% +29.4798% +25.4902% +18.8329%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.1900 +0.5400 +1.5700 +1.4600 +1.4100 +1.6900 +11.6129% +43.3702% +39.1421% +37.3016% +48.2857%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.1200 -1.9200 +0.5700 +1.0200 -0.0900 -21.2389% +8.7023% +16.7213% -1.2483%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.6100 +0.1400 +0.4700 -0.9700 -0.6100 +3.1320% +11.3527% -17.3835% -11.6858%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 26.2400 +0.0600 +1.9600 +0.2292% +8.0725%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 13.4400 +0.5300 +1.0200 +4.1053% +8.2126%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 13.2100 +1.1500 -1.2000 +9.5357% -8.3276%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 32.3000 +4.7900 +4.0200 +17.4119% +14.2150%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 32.5000 +4.8300 +4 +17.4557% +14.0351%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png