Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1353070 +256576 +46065 +41115 +59529 +59529 +23.3997% +3.5245% +3.1339% +4.6020% +4.6020%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 682395 +96073 +66633 +71685 +82514 +82514 +16.3857% +10.8212% +11.7380% +13.7551% +13.7551%
MTAC_3P_Standard 596590 623022 617574 607435 607435 687634 +91044 +64612 +70060 +80199 +80199 +15.2607% +10.3707% +11.3444% +13.2029% +13.2029%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 154782 +17234 +17943 +19222 +19222 +12.5294% +13.1125% +14.1797% +14.1797%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 173475 +17834 +16924 +16966 +18440 +18631 +11.4584% +10.8105% +10.8403% +11.8941% +12.0321%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 155656 +17147 +16271 +16364 +17771 +17869 +12.3797% +11.6734% +11.7480% +12.8883% +12.9686%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 175135 +16173 +16403 +15975 +17213 +17213 +10.1741% +10.3338% +10.0371% +10.8997% +10.8997%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1357201 +334465 +202532 +233328 +173117 +173117 +32.7030% +17.5403% +20.7611% +14.6203% +14.6203%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 56611 +15729 +14911 +14186 +14511 +14511 +38.4741% +35.7578% +33.4378% +34.4679% +34.4679%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 54562 +13493 +12160 +12539 +13410 +13410 +32.8545% +28.6779% +29.8384% +32.5865% +32.5865%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 45086 +36346 +21971 +22071 +22173 +22173 +415.8581% +95.0508% +95.8983% +96.7704% +96.7704%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 30944 +14009 +13391 +12535 +12596 +12596 +82.7222% +76.2890% +68.0917% +68.6505% +68.6505%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 122869 +22961 +19978 +23886 +24221 +24221 +22.9821% +19.4167% +24.1314% +24.5530% +24.5530%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 90157 +19059 +17429 +18712 +19031 +19031 +26.8067% +23.9646% +26.1908% +26.7567% +26.7567%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 131494 +25790 +24997 +25872 +27060 +26982 +24.3983% +23.4720% +24.4949% +25.9111% +25.8171%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 138096 +22939 +20780 +23774 +25015 +24846 +19.9198% +17.7128% +20.7956% +22.1213% +21.9391%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 20565 +10371 +9759 +9327 +9332 +9332 +101.7363% +90.3109% +82.9952% +83.0766% +83.0766%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 21885 +7078 +6452 +5844 +6186 +6186 +47.8017% +41.8065% +36.4316% +39.4038% +39.4038%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8927 +7666 +6895 +6477 +6541 +6541 +607.9302% +339.3209% +264.3673% +274.1408% +274.1408%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 15879 +14443 +11096 +10189 +10148 +10148 +1005.7799% +231.9883% +179.0685% +177.0721% +177.0721%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 33674 +11964 +11779 +11094 +11211 +11211 +55.1082% +53.7977% +49.1320% +49.9087% +49.9087%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 34566 +8706 +8423 +8306 +8941 +8941 +33.6659% +32.2189% +31.6299% +34.8917% +34.8917%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20453 +16969 +13555 +13619 +13619 +487.0551% +196.5062% +199.2830% +199.2830%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 29444 +18745 +17970 +16562 +16555 +16555 +175.2033% +156.6150% +128.5670% +128.4429% +128.4429%
SCP_Astral_MBR 92167 93585 91884 90864 90838 117160 +24993 +23575 +25276 +26296 +26322 +27.1171% +25.1910% +27.5086% +28.9400% +28.9769%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61414 +4715 +5621 +5523 +5523 +8.3158% +10.0747% +9.8817% +9.8817%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1952000 +175872 +176654 +9.9020% +9.9504%
EWZ_2P_MBR_Exploris_Human 836809 836809 918123 +81314 +81314 +9.7172% +9.7172%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1024304 +109380 +110355 +11.9551% +12.0745%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2295253 +217219 +217217 +10.4531% +10.4530%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2295253 +217219 +217217 +10.4531% +10.4530%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 154090 +42586 +20471 +22731 +22059 +22059 +38.1924% +15.3204% +17.3045% +16.7074% +16.7074%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 134613 +26346 +17261 +19954 +19797 +19797 +24.3343% +14.7087% +17.4029% +17.2424% +17.2424%
MTAC_3P_Standard 110265 118693 115800 116148 116148 136562 +26297 +17869 +20762 +20414 +20414 +23.8489% +15.0548% +17.9292% +17.5759% +17.5759%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 57001 +8143 +7969 +8006 +8006 +16.6667% +16.2527% +16.3404% +16.3404%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63481 +9512 +8406 +7641 +7597 +7660 +17.6249% +15.2628% +13.6837% +13.5942% +13.7224%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 58013 +9392 +8348 +7724 +7553 +7598 +19.3168% +16.8086% +15.3592% +14.9683% +15.0709%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 64188 +9128 +8269 +7481 +7361 +7361 +16.5783% +14.7875% +13.1924% +12.9533% +12.9533%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75515 +24243 +16731 +20468 +16922 +16950 +47.2831% +28.4618% +37.1828% +28.8806% +28.9422%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21286 +6846 +6328 +6037 +5579 +5579 +47.4100% +42.3051% +39.5895% +35.5192% +35.5192%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20166 +5683 +5101 +5250 +5096 +5094 +39.2391% +33.8599% +35.1971% +33.8155% +33.7978%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18192 +9452 +8816 +8803 +8828 +8807 +108.1465% +94.0273% +93.7587% +94.2760% +93.8412%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17310 +8412 +8051 +7526 +7500 +7500 +94.5381% +86.9532% +76.9215% +76.4526% +76.4526%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 43723 +8858 +7426 +9381 +9298 +9298 +25.4066% +20.4590% +27.3164% +27.0094% +27.0094%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32449 +7800 +6983 +7330 +7226 +7226 +31.6443% +27.4209% +29.1811% +28.6485% +28.6485%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 47940 +11252 +10264 +10291 +10519 +10481 +30.6694% +27.2428% +27.3341% +28.1099% +27.9799%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 49322 +9166 +7777 +9279 +9429 +9376 +22.8260% +18.7195% +23.1726% +23.6357% +23.4717%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8222 +4556 +4273 +4013 +3976 +3976 +124.2771% +108.2046% +95.3433% +93.6411% +93.6411%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8510 +3211 +2899 +2655 +2444 +2443 +60.5963% +51.6664% +45.3459% +40.2901% +40.2670%
SCP_Astral_250pg_3ms 675 721 908 879 879 4228 +3553 +3507 +3320 +3349 +3349 +526.3704% +486.4078% +365.6388% +381.0011% +381.0011%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6732 +5296 +4994 +4587 +4569 +4567 +368.8022% +287.3418% +213.8462% +211.2344% +210.9469%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12994 +5200 +5022 +4742 +4588 +4586 +66.7180% +62.9955% +57.4649% +54.5801% +54.5433%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12981 +3823 +3639 +3610 +3567 +3566 +41.7449% +38.9531% +38.5231% +37.8904% +37.8757%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8844 +6998 +6244 +6258 +6255 +379.0899% +240.1538% +241.9954% +241.5991%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 11753 +7879 +7598 +6979 +6948 +6949 +203.3815% +182.8640% +146.1877% +144.5994% +144.6503%
SCP_Astral_MBR 24110 24991 24570 24544 24527 32439 +8329 +7448 +7869 +7895 +7912 +34.5458% +29.8027% +32.0269% +32.1667% +32.2583%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61414 +4715 +5621 +5523 +5523 +8.3158% +10.0747% +9.8817% +9.8817%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64077 +8806 +8930 +15.9324% +16.1931%
EWZ_2P_MBR_Exploris_Human 48465 48473 55706 +7241 +7233 +14.9407% +14.9217%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 59828 +8582 +8651 +16.7467% +16.9041%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80783 +7505 +7506 +10.2418% +10.2433%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80783 +7505 +7506 +10.2418% +10.2433%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92379 +4459 -509 -1603 -1062 -1907 +5.0717% -0.5480% -1.7056% -1.1365% -2.0226%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 68586 +4813 +4612 +4975 +5571 +2751 +7.5471% +7.2092% +7.8210% +8.8408% +4.1786%
MTAC_3P_Standard 64317 64464 64219 63385 65967 69427 +5110 +4963 +5208 +6042 +3460 +7.9450% +7.6989% +8.1097% +9.5322% +5.2450%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12859 +792 +889 +919 +620 +6.5634% +7.4269% +7.6968% +5.0658%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13151 +719 +680 +789 +823 +491 +5.7835% +5.4527% +6.3825% +6.6759% +3.8784%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12835 +827 +788 +875 +867 +655 +6.8871% +6.5410% +7.3161% +7.2443% +5.3777%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13321 +760 +856 +844 +911 +547 +6.0505% +6.8672% +6.7644% +7.3409% +4.2821%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 159859 +13635 +6325 +5869 +4032 +2573 +9.3247% +4.1196% +3.8113% +2.5875% +1.6359%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12246 +3083 +2718 +2661 +2912 +2224 +33.6462% +28.5264% +27.7621% +31.1978% +22.1912%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11792 +2494 +2031 +2380 +2239 +1803 +26.8230% +20.8073% +25.2869% +23.4377% +18.0499%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9973 +7523 +3889 +3726 +3857 +3624 +307.0612% +63.9218% +59.6446% +63.0641% +57.0799%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6634 +1931 +2046 +1676 +1711 +1685 +41.0589% +44.5946% +33.8040% +34.7552% +34.0473%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18023 +1833 +1743 +1998 +1968 +1487 +11.3218% +10.7064% +12.4680% +12.2579% +8.9925%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15334 +1735 +1493 +1646 +1663 +1350 +12.7583% +10.7868% +12.0251% +12.1644% +9.6539%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18368 +2116 +2092 +2251 +2443 +1910 +13.0199% +12.8533% +13.9666% +15.3407% +11.6053%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19166 +2149 +1988 +2253 +2421 +1817 +12.6285% +11.5729% +13.3211% +14.4580% +10.4732%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5979 +2332 +2066 +2115 +2440 +2165 +63.9430% +52.7984% +54.7360% +68.9460% +56.7646%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6155 +1855 +1552 +1358 +1178 +986 +43.1395% +33.7171% +28.3094% +23.6689% +19.0753%
SCP_Astral_250pg_3ms 576 22 936 741 736 2688 +2112 +2666 +1752 +1947 +1952 +366.6667% +12118.1818% +187.1795% +262.7530% +265.2174%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4702 +4065 +2622 +2673 +2656 +2634 +638.1476% +126.0577% +131.7398% +129.8143% +127.3694%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8028 +1783 +1682 +2012 +1901 +1809 +28.5508% +26.5049% +33.4441% +31.0266% +29.0883%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8372 +1650 +1643 +1360 +1349 +1030 +24.5463% +24.4167% +19.3953% +19.2083% +14.0289%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5513 +4531 +3148 +3336 +3277 +461.4053% +133.1078% +153.2384% +146.5564%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7331 +3623 +3324 +3286 +3413 +3228 +97.7077% +82.9548% +81.2361% +87.1108% +78.6741%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21608 +1443 +1479 +1534 +1815 +1710 +7.1560% +7.3476% +7.6417% +9.1699% +8.5938%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5074 +389 +374 +442 +335 +8.3031% +7.9574% +9.5423% +7.0690%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 253253 +7994 +5831 +3.2594% +2.3567%
EWZ_2P_MBR_Exploris_Human 115447 117345 118266 +2819 +921 +2.4418% +0.7849%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 134722 +5754 +4016 +4.4616% +3.0725%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 193266 +15092 +9723 +8.4704% +5.2974%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 193266 +15092 +9723 +8.4704% +5.2974%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8529 +684 +354 +374 +326 +280 +8.7189% +4.3303% +4.5861% +3.9742% +3.3944%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12586 +1225 +1092 +1235 +1248 +788 +10.7825% +9.5006% +10.8801% +11.0072% +6.6791%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12730 +1257 +1170 +1253 +1334 +898 +10.9562% +10.1211% +10.9175% +11.7059% +7.5896%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4425 +297 +333 +325 +242 +7.1948% +8.1378% +7.9268% +5.7853%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4509 +294 +261 +291 +295 +172 +6.9751% +6.1441% +6.8990% +7.0005% +3.9659%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4420 +345 +286 +330 +323 +235 +8.4663% +6.9182% +8.0685% +7.8838% +5.6153%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4571 +322 +334 +327 +340 +217 +7.5783% +7.8829% +7.7050% +8.0359% +4.9839%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8169 +914 +587 +829 +690 +632 +12.5982% +7.7420% +11.2943% +9.2258% +8.3853%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4432 +1187 +1043 +1021 +1114 +871 +36.5794% +30.7760% +29.9326% +33.5744% +24.4594%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4210 +956 +777 +919 +776 +718 +29.3792% +22.6333% +27.9246% +22.5976% +20.5613%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3748 +1298 +1352 +1298 +1351 +1314 +52.9796% +56.4274% +52.9796% +56.3621% +53.9852%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3529 +1021 +1093 +895 +887 +946 +40.7097% +44.8686% +33.9787% +33.5731% +36.6241%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6251 +672 +595 +747 +705 +597 +12.0452% +10.5198% +13.5719% +12.7119% +10.5589%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5371 +650 +533 +588 +560 +527 +13.7683% +11.0169% +12.2935% +11.6400% +10.8794%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6448 +837 +793 +852 +895 +735 +14.9171% +14.0230% +15.2252% +16.1174% +12.8654%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6672 +826 +723 +829 +867 +707 +14.1293% +12.1533% +14.1879% +14.9354% +11.8525%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2250 +958 +826 +844 +962 +891 +74.1486% +58.0056% +60.0284% +74.6894% +65.5629%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2252 +684 +592 +494 +379 +382 +43.6224% +35.6627% +28.1001% +20.2349% +20.4278%
SCP_Astral_250pg_3ms 307 8 350 283 281 1113 +806 +1105 +763 +830 +832 +262.5407% +13812.5000% +218.0000% +293.2862% +296.0854%
SCP_Astral_250pg_6ms 637 756 751 766 767 1802 +1165 +1046 +1051 +1036 +1035 +182.8885% +138.3598% +139.9467% +135.2480% +134.9413%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2917 +710 +642 +748 +687 +700 +32.1704% +28.2198% +34.4859% +30.8072% +31.5742%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3058 +655 +670 +581 +519 +460 +27.2576% +28.0570% +23.4558% +20.4411% +17.7059%
SCP_Astral_500pg_3ms 525 902 828 835 2152 +1627 +1250 +1324 +1317 +309.9048% +138.5809% +159.9034% +157.7246%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2728 +1410 +1281 +1242 +1293 +1260 +106.9803% +88.5280% +83.5801% +90.1045% +85.8311%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5279 +571 +559 +567 +564 +563 +12.1283% +11.8432% +12.0331% +11.9618% +11.9381%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5074 +389 +374 +442 +335 +8.3031% +7.9574% +9.5423% +7.0690%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7449 +408 +343 +5.7946% +4.8269%
EWZ_2P_MBR_Exploris_Human 6167 6284 6405 +238 +121 +3.8593% +1.9255%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7371 +484 +408 +7.0277% +5.8595%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6437 +633 +482 +10.9063% +8.0940%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6437 +633 +482 +10.9063% +8.0940%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92364 -1915
MTAC_3P_Alternating 65832 68580 +2748
MTAC_3P_Standard 65967 69404 +3437
MTAC_Yeast_Alternating_3min 12239 12854 +615
MTAC_Yeast_Alternating_5min 12660 13148 +488
MTAC_Yeast_Standard_3min 12180 12834 +654
MTAC_Yeast_Standard_5min 12772 13319 +547
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 159858 +2573
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12245 +2223
SCP_Astral_1000pg_24ms 9989 11792 +1803
SCP_Astral_1000pg_3ms 6349 9968 +3619
SCP_Astral_1000pg_6ms 4949 6632 +1683
SCP_Astral_10ng_12ms 16536 18023 +1487
SCP_Astral_10ng_24ms 13982 15334 +1352
SCP_Astral_10ng_3ms 16458 18361 +1903
SCP_Astral_10ng_6ms 17349 19165 +1816
SCP_Astral_250pg_12ms 3814 5978 +2164
SCP_Astral_250pg_24ms 5169 6155 +986
SCP_Astral_250pg_3ms 736 2688 +1952
SCP_Astral_250pg_6ms 2066 4702 +2636
SCP_Astral_500pg_12ms 6219 8026 +1807
SCP_Astral_500pg_24ms 7342 8371 +1029
SCP_Astral_500pg_3ms 2234 5510 +3276
SCP_Astral_500pg_6ms 4103 7330 +3227
SCP_Astral_MBR 19891 21608 +1717
Seer_Astral_45 242898
Seer_Astral_single 4739 5074 +335
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 253245 +5823
EWZ_2P_MBR_Exploris_Human 117340 118244 +904
EWZ_2P_MBR_Exploris_YeastHuman 130702 134715 +4013
MacCoss_Eclipse_Normalization_noNorm 183540 193263 +9723
MacCoss_Eclipse_Normalization_yesNorm 183540 193263 +9723

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0012 -0.0000 -0.0000
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0005 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0014 -0.0009 -0.0013 -0.0004 -0.0006 -0.0006
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0003 +0.0010 -0.0008 +0.0002 +0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0014 +0.0001 +0.0005 +0.0012 +0.0012
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0016 -0.0012 -0.0004 -0.0002 -0.0001 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0002 +0.0017 +0.0011 +0.0010 +0.0018 +0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0003 +0.0014 +0.0023 +0.0027 +0.0028
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0004 -0.0010 -0.0010
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0006 +0.0008 +0.0003 +0.0017 +0.0001 +0.0001
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0020 +0.0002 +0.0009 -0.0000
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0010 +0.0064 +0.0043 +0.0041 +0.0056 +0.0056
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0002 +0.0032 +0.0050 +0.0032 +0.0041 +0.0048
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0010 +0.0012 +0.0021 +0.0046 +0.0036 +0.0036
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0004 +0.0026 +0.0021 +0.0029 +0.0029
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0010 +0.0030 +0.0001 +0.0025 +0.0023 +0.0023
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0004 +0.0020 +0.0022 +0.0014 +0.0013 +0.0013
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0008 +0.0000 -0.0008 +0.0014 +0.0004 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0011 +0.0049 +0.0051 +0.0008 +0.0063 +0.0063
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0017 +0.0019 +0.0029 +0.0041 +0.0048 +0.0048
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0030 +0.0098 +0.0030 +0.0030
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0016 +0.0067 +0.0043 +0.0066 +0.0061
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0011 +0.0033 +0.0021 +0.0039 +0.0037 +0.0037
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 -0.0010 +0.0002 +0.0014 +0.0002 +0.0001 +0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0031 +0.0044 +0.0054 +0.0066 +0.0066
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0039 +0.0070 +0.0072 +0.0054 +0.0054
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0001 +0.0027 +0.0021 +0.0015 +0.0023 +0.0023
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0002 +0.0020 +0.0020
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0022 +0.0004 +0.0005
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0023 +0.0007 -0.0009
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0030 -0.0020 -0.0019 -0.0035 -0.0037 -0.0019
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0011 +0.0002 +0.0014 +0.0019 +0.0015 +0.0033
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0021 +0.0045 +0.0032 +0.0027 +0.0023
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0020 +0.0021 +0.0018 +0.0028 +0.0013 +0.0037
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0021 +0.0037 +0.0027 -0.0001 +0.0007 +0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0002 +0.0034 +0.0043 +0.0054 +0.0052
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0050 -0.0047 -0.0019
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0022 +0.0008 -0.0020 +0.0007 -0.0013 -0.0004
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0034 +0.0015 +0.0008 +0.0009 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0019 +0.0089 +0.0077 +0.0089 +0.0089 +0.0102
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0027 +0.0033 +0.0032 +0.0045 +0.0045 +0.0060
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0017 +0.0001 +0.0033 +0.0026 +0.0028 +0.0030
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0037 +0.0017 +0.0003 +0.0017 +0.0023
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0014 +0.0019 +0.0009 +0.0003 +0.0031 +0.0022
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0002 +0.0038 +0.0075 +0.0068 +0.0062 +0.0062
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0021 +0.0034 -0.0001 +0.0033 +0.0026 +0.0028
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0007 +0.0060 +0.0083 +0.0041 +0.0070 +0.0068
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0000 +0.0042 +0.0042 +0.0026 +0.0013 +0.0042
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0023 +0.0050 +0.0023 +0.0108 +0.0023 +0.0023
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0050 +0.0149 +0.0117 +0.0134 +0.0138 +0.0138
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0004 +0.0032 +0.0036 -0.0018 +0.0017 +0.0020
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0063 -0.0043 -0.0062 -0.0011 -0.0001 -0.0002
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0000 +0.0042 -0.0070 -0.0020 +0.0001 +0.0002
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0001 +0.0045 +0.0046 +0.0008 +0.0056 +0.0043
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0006 +0.0065 +0.0036 +0.0031 +0.0056 +0.0062
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 -0.0010 +0.0064 +0.0063
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0010 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0004 -0.0001 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0011 -0.0009 -0.0013 -0.0009 -0.0009 -0.0009
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0002 +0.0007 -0.0004 +0.0002 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0011 -0.0001 +0.0002 +0.0003 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0012 -0.0008 -0.0004 -0.0002 -0.0004 -0.0004
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0005 +0.0003 +0.0002 +0.0003 +0.0006 +0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0001 +0.0009 +0.0011 +0.0015 +0.0015
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0000 -0.0002 -0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0003 +0.0008 -0.0002 +0.0009 +0.0003 +0.0003
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0015 +0.0001 +0.0015 +0.0004
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0006 +0.0052 +0.0034 +0.0037 +0.0043 +0.0043
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0001 +0.0021 +0.0030 +0.0027 +0.0027 +0.0035
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0005 +0.0003 +0.0011 +0.0032 +0.0029 +0.0029
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0002 +0.0018 +0.0011 +0.0017 +0.0017
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0005 +0.0019 +0.0002 +0.0017 +0.0013 +0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0005 +0.0015 +0.0016 +0.0011 +0.0010 +0.0010
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0007 -0.0002 -0.0009 +0.0005 +0.0002 +0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0012 +0.0042 +0.0038 +0.0014 +0.0043 +0.0043
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0017 +0.0024 +0.0025 +0.0030 +0.0031 +0.0031
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0015 +0.0075 +0.0015 +0.0015
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0008 +0.0045 +0.0030 +0.0038 +0.0038
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0010 +0.0029 +0.0014 +0.0030 +0.0023 +0.0023
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 -0.0007 +0.0009 +0.0010 +0.0011 +0.0010 +0.0010
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0041 +0.0023 +0.0045 +0.0057 +0.0057
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0028 +0.0054 +0.0047 +0.0038 +0.0038
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0005 +0.0022 +0.0020 +0.0013 +0.0018 +0.0018
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0002 +0.0020 +0.0020
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0000 +0.0012 +0.0014
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0017 -0.0000 -0.0011
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0016 -0.0015 -0.0014 -0.0019 -0.0018 -0.0010
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0003 +0.0005 +0.0011 +0.0018 +0.0015 +0.0021
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0007 +0.0029 +0.0026 +0.0022 +0.0015
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 -0.0005 +0.0033 +0.0017 +0.0020 +0.0009 +0.0021
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0009 +0.0029 +0.0026 +0.0005 +0.0007 +0.0010
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0004 +0.0019 +0.0023 +0.0033 +0.0030
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0015 -0.0011 +0.0005
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0015 +0.0012 -0.0021 +0.0002 +0.0001 +0.0005
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0028 +0.0009 -0.0005 +0.0004 +0.0011
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0015 +0.0063 +0.0070 +0.0072 +0.0058 +0.0074
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0027 +0.0017 +0.0006 +0.0014 +0.0004 +0.0037
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0011 +0.0013 +0.0023 +0.0029 +0.0029 +0.0021
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0032 +0.0016 -0.0001 +0.0010 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0006 +0.0026 +0.0008 +0.0009 +0.0020 +0.0025
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0001 +0.0022 +0.0047 +0.0038 +0.0033 +0.0040
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0021 +0.0018 -0.0002 +0.0017 +0.0008 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0014 +0.0053 +0.0055 +0.0033 +0.0044 +0.0058
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0011 +0.0002 +0.0021 -0.0008 -0.0011 +0.0017
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0021 +0.0081 +0.0102 +0.0067 +0.0021 +0.0021
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0038 +0.0138 +0.0106 +0.0093 +0.0085 +0.0086
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0007 +0.0046 +0.0042 +0.0014 +0.0034 +0.0029
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0044 -0.0025 -0.0045 -0.0001 +0.0001 +0.0023
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0011 +0.0043 -0.0056 -0.0017 +0.0008 +0.0008
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0014 +0.0034 +0.0036 +0.0005 +0.0042 +0.0032
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0006 +0.0030 +0.0023 +0.0028 +0.0034 +0.0047
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 -0.0004 +0.0070 +0.0065
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 9573 -14822 -15015

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 438 -333 -324

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0458 +0.0141 +0.0148

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 265 -579 +894

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 1 -189 -55

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0.0038 -0.2213 +0.0038

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 12 +4 +1 +1 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1716 +0.0257 +0.0295 +0.0316 +0.0342 +0.0341
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1635 +0.0242 +0.0273 +0.0284 +0.0311 +0.0310
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1693 +0.0237 +0.0268 +0.0285 +0.0284
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1580 +0.0049 +0.0170 +0.0204 +0.0224 +0.0225
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1749 +0.0052 +0.0110 +0.0134 +0.0150 +0.0152
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1543 +0.0040 +0.0177 +0.0206 +0.0220 +0.0219
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1549 +0.0069 +0.0050 +0.0054 +0.0044 +0.0043
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5969 +0.0100 +0.0099
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2139 +0.0422 +0.0421

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0862 +0.0099 +0.0123 +0.0135 +0.0142 +0.0105
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0827 +0.0103 +0.0124 +0.0127 +0.0139 +0.0109
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0754 +0.0081 +0.0094 +0.0096 +0.0067
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0667 -0.0111 +0.0064 +0.0074 +0.0078 +0.0065
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0811 +0.0019 +0.0055 +0.0058 +0.0039 +0.0037
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0648 -0.0122 +0.0081 +0.0080 +0.0080 +0.0065
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1013 -0.0015 -0.0006 -0.0023 -0.0014 -0.0020
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5790 -0.0091 -0.0090
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1424 +0.0191 +0.0177

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0130 -0.0020 +0.0070 +0.0012 +0.0000 -0.0647
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0046 -0.0076 +0.0055 -0.0002 -0.0001 -0.0362
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0002 +0.0007 -0.0023 -0.0001 -0.0000 -0.0006
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0611 +0.0012 -0.0008 +0.0020 -0.0002 -0.0655
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0610 -0.0054 -0.0006 -0.0003 +0.0001 -0.0113
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0535 -0.0080 +0.0050 -0.0016 -0.0001 +0.0245
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1269 -0.0059 -0.0059 +0.0211 -0.0012 -0.1084
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0809 +0.0062 +0.0047 -0.0191 -0.0001 +0.0205
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1946 +0.0183 -0.0240 +0.0287 +0.0020 -0.0859
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1051 +0.0048 -0.0054 -0.0067 +0.0002 +0.0166
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0469 +0.0009 +0.0001 -0.0089 -0.0000 +0.0013
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2080 +0.0051 -0.0017 +0.0004 +0.0004 +0.0041
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1364 -0.0032 -0.0062 -0.0160 +0.0006 +0.1133
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0798 +0.0043 -0.0045 -0.0054 -0.0001 -0.0221
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0461 +0.0169 -0.0238 +0.0355 +0 -0.0503
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0101 +0.0009 +0.0076 -0.0005 +0.0006 -0.0638
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0040 -0.0089 +0.0045 +0.0004 +0.0011 -0.0382
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0141 +0.0054 -0.0044 +0.0010 +0.0033 +0.0072
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0622 +0.0013 +0.0005 -0.0055 +0.0004 -0.0588
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0622 -0.0060 -0.0005 -0.0005 -0.0005 -0.0074
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0454 -0.0084 +0.0078 -0.0007 +0.0020 +0.0124
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1590 -0.0077 -0.0028 +0.0144 -0.0004 -0.0617
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0746 +0.0048 +0.0016 -0.0170 -0.0057 +0.0247
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2446 +0.0504 -0.0481 +0.0073 +0.0089 -0.0297
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1042 +0.0031 -0.0032 -0.0081 +0.0006 +0.0277
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0445 +0.0011 -0.0008 -0.0084 -0.0000 +0.0025
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2191 +0.0036 -0.0008 +0.0016 +0.0018 +0.0141
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1121 +0.0005 -0.0096 -0.0297 +0.0070 +0.1006
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0823 +0.0056 -0.0034 -0.0033 +0.0038 -0.0300
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0529 +0.0405 -0.0089 +0.0322 +0.0276 -0.0919
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1528 +0.0343 +0.0202 -0.0086 +0.0005 -0.1555
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1281 +0.0169 -0.0058 +0.0004 +0.0004 -0.0822
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1423 +0.0117 -0.0078 +0.0011 -0.0001 -0.1184
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1427 +0.0441 -0.0007 -0.0136 +0.0007 -0.1560
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1331 +0.0164 -0.0031 -0.0002 +0.0007 -0.0868
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1387 +0.0170 -0.0063 +0.0017 +0.0006 -0.1299
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2160 +0.0445 +0.0761 -0.1281 +0.0017 -0.3566
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0406 -0.0103 +0.0134 -0.0147 -0.0018 -0.1088
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3518 -0.0030 +0.1483 +0.0078 -0.0120 -0.5937
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1847 +0.0037 +0.0045 +0.0051 +0.0002 -0.1659
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0432 +0.0676 -0.0087 -0.0168 +0.0006 -0.1091
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1862 +0.0316 +0.0062 -0.0049 +0.0001 -0.1492
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2420 -0.0093 +0.0378 -0.0706 +0.0033 -0.3381
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0730 +0.0977 -0.0155 +0.0159 +0.0001 -0.1749
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5417 +0.0737 +0.1982 -0.0827 -0.0008 -0.7327
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0607 +0.0149 -0.0182 -0.0054 +0.1015 -0.1616
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0407 +0.0035 +0.0005 +0.0043 +0.0189 -0.0597
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0528 -0.0157 -0.0104 +0.0083 +0.0352 -0.0946
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0595 -0.0042 +0.0002 -0.0084 +0.0711 -0.1312
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0386 +0.0032 -0.0030 +0.0035 +0.0313 -0.0643
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0595 +0.0000 +0.0073 -0.0081 +0.0305 -0.0963
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0479 +0.0146 +0.0452 -0.0355 +0.0761 -0.2558
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0191 -0.0057 -0.0062 -0.0031 +0.0154 -0.0449
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0525 -0.1294 +0.1626 +0.0090 +0.0813 -0.5293
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0301 -0.0046 +0.0074 +0.0016 +0.0039 -0.0429
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0098 +0.0109 -0.0066 +0.0090 -0.0065 -0.0270
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0369 -0.0053 +0.0093 +0.0025 +0.0083 -0.0537
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0727 -0.0166 +0.0170 -0.0166 +0.0315 -0.1763
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0215 +0.0068 -0.0006 -0.0039 +0.0560 -0.1083
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1991 -0.0891 -0.0032 -0.0082 +0.0618 -0.2931
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 21.8300 -2.2400 +4.5100 +1.9600 +4.7000 +2.8000 -9.3062% +26.0393% +9.8641% +27.4372% +14.7136%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10.3600 -2.3900 +1.2900 +2 +1.0700 +2.2300 -18.7451% +14.2227% +23.9234% +11.5178% +27.4293%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.9700 -2.3400 +1.0100 +0.3100 -0.8400 +0.1800 -19.0089% +11.2723% +3.2091% -7.7706% +1.8386%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.6700 +1.4400 +1.2600 +0.7300 +1.3900 +34.0426% +28.5714% +14.7773% +32.4766%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.4500 +0.0700 +1.0700 +0.7000 +0.9100 +0.8900 +1.3011% +24.4292% +14.7368% +20.0441% +19.5175%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.4200 -0.0100 +1.2800 +0.9800 +0.7600 +1.1800 -0.1842% +30.9179% +22.0721% +16.3090% +27.8302%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.5400 -0.0100 +1.1200 +1.0100 +1.0800 +1 -0.1802% +25.3394% +22.2958% +24.2152% +22.0264%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 17.3100 -10.3500 -2.4500 -1.0100 -1.9700 -0.5900 -37.4187% -12.3988% -5.5131% -10.2178% -3.2961%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.2600 -0.5300 +0.6700 +0.6100 +1.1700 +0.9000 -9.1537% +14.5969% +13.1183% +28.6064% +20.6422%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.4400 -0.8200 +1.0400 -0.4400 +0.4300 -13.0990% +23.6364% -7.4830% +8.5828%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.3400 +0.8200 +1.6100 +0.5400 +1.7000 +1.5100 +18.1416% +43.1635% +11.2500% +46.7033% +39.4256%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.4300 -1.3100 +0.9200 +0.5100 +0.9900 +0.7100 -22.8223% +26.2108% +13.0102% +28.7791% +19.0860%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.8200 -0.2500 +1.2900 +1.3100 +1.0800 +1.3500 -3.5361% +23.3273% +23.7750% +18.8153% +24.6801%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 7.6000 +0.0100 +1.8700 +1.4600 +2.0600 +1.7100 +0.1318% +32.6353% +23.7785% +37.1841% +29.0323%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.8300 -0.6200 +1.1600 +1.5300 +1.4200 +1.4100 -9.6124% +24.8394% +35.5814% +32.1995% +31.9005%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.6400 -0.7400 +1.7100 +2.0100 +1.0200 +1.6800 -10.0271% +34.6856% +43.4125% +18.1495% +33.8710%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.6900 -0.0500 +1.0300 +1.3000 +1.1000 -1.0549% +28.1421% +38.3481% +30.6407%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 5.6400 +0.3800 +1.8000 +1.8800 +1.5800 +7.2243% +46.8750% +50% +38.9163%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.4700 -0.1800 +1.0400 +0.7600 +1.0200 +0.9200 -3.8710% +30.3207% +20.4852% +29.5652% +25.9155%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.9300 +0.7600 +1.6400 +1.2400 +1.6600 +1.4100 +18.2254% +49.8480% +33.6043% +50.7645% +40.0568%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.9100 -0.3700 +1.3800 +1.3100 +1.4200 +1.2100 -7.0076% +39.0935% +36.3889% +40.6877% +32.7027%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.8500 +0.3400 +2.0300 +1.7000 +1.0400 +1.8200 +6.1706% +53.1414% +40.9639% +21.6216% +45.1613%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 5.1300 +0.4000 +1.6700 +1.5600 +1.3600 +8.4567% +48.2659% +43.6975% +36.0743%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.1100 +0.4600 +1.4900 +1.3800 +1.3300 +1.6100 +9.8925% +41.1602% +36.9973% +35.1852% +46.0000%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.4400 -1.6000 +0.8900 +1.3400 +0.2300 -17.6991% +13.5878% +21.9672% +3.1900%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.1200 +0.6500 +0.9800 -0.4600 -0.1000 +14.5414% +23.6715% -8.2437% -1.9157%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 27.2000 +1.0200 +2.9200 +3.8961% +12.0264%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 13.9600 +1.0500 +1.5400 +8.1332% +12.3994%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 16.1600 +4.1000 +1.7500 +33.9967% +12.1443%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 41.6100 +14.1000 +13.3300 +51.2541% +47.1358%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 36.6600 +8.9900 +8.1600 +32.4901% +28.6316%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png