Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1339602 +243108 +32597 +27647 +46061 +46061 +22.1714% +2.4940% +2.1073% +3.5608% +3.5608%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 649273 +62951 +33511 +38563 +49392 +49392 +10.7366% +5.4422% +6.3145% +8.2336% +8.2336%
MTAC_3P_Standard 596590 623022 617574 607435 607435 658399 +61809 +35377 +40825 +50964 +50964 +10.3604% +5.6783% +6.6105% +8.3900% +8.3900%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 151429 +13881 +14590 +15869 +15869 +10.0917% +10.6622% +11.7063% +11.7063%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 171211 +15570 +14660 +14702 +16176 +16367 +10.0038% +9.3644% +9.3937% +10.4338% +10.5700%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 154306 +15797 +14921 +15014 +16421 +16519 +11.4050% +10.7049% +10.7788% +11.9092% +11.9888%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 172140 +13178 +13408 +12980 +14218 +14218 +8.2900% +8.4469% +8.1553% +9.0032% +9.0032%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1316987 +294251 +162318 +193114 +132903 +132903 +28.7710% +14.0575% +17.1829% +11.2241% +11.2241%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 50734 +9852 +9034 +8309 +8634 +8634 +24.0986% +21.6643% +19.5852% +20.5083% +20.5083%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 50927 +9858 +8525 +8904 +9775 +9775 +24.0035% +20.1052% +21.1884% +23.7534% +23.7534%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 40116 +31376 +17001 +17101 +17203 +17203 +358.9931% +73.5496% +74.3037% +75.0796% +75.0796%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 28395 +11460 +10842 +9986 +10047 +10047 +67.6705% +61.7672% +54.2452% +54.7580% +54.7580%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 115739 +15831 +12848 +16756 +17091 +17091 +15.8456% +12.4870% +16.9282% +17.3252% +17.3252%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 85086 +13988 +12358 +13641 +13960 +13960 +19.6743% +16.9921% +19.0930% +19.6271% +19.6271%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 120013 +14309 +13516 +14391 +15579 +15501 +13.5369% +12.6914% +13.6250% +14.9176% +14.8318%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 126610 +11453 +9294 +12288 +13529 +13360 +9.9456% +7.9222% +10.7486% +11.9640% +11.7969%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 18207 +8013 +7401 +6969 +6974 +6974 +78.6051% +68.4897% +62.0128% +62.0849% +62.0849%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 18840 +4033 +3407 +2799 +3141 +3141 +27.2371% +22.0761% +17.4490% +20.0076% +20.0076%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8243 +6982 +6211 +5793 +5857 +5857 +553.6875% +305.6594% +236.4490% +245.4736% +245.4736%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14001 +12565 +9218 +8311 +8270 +8270 +875% +192.7242% +146.0633% +144.3029% +144.3029%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 30655 +8945 +8760 +8075 +8192 +8192 +41.2022% +40.0091% +35.7617% +36.4689% +36.4689%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 30861 +5001 +4718 +4601 +5236 +5236 +19.3387% +18.0469% +17.5209% +20.4332% +20.4332%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 18329 +14845 +11431 +11495 +11495 +426.0907% +165.7147% +168.2031% +168.2031%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 27657 +16958 +16183 +14775 +14768 +14768 +158.5008% +141.0406% +114.6949% +114.5783% +114.5783%
SCP_Astral_MBR 92167 93585 91884 90864 90838 108695 +16528 +15110 +16811 +17831 +17857 +17.9327% +16.1457% +18.2959% +19.6238% +19.6581%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 57443 +744 +1650 +1552 +1552 +1.3122% +2.9574% +2.7768% +2.7768%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1913607 +137479 +138261 +7.7404% +7.7878%
EWZ_2P_MBR_Exploris_Human 836809 836809 898160 +61351 +61351 +7.3315% +7.3315%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 999349 +84425 +85400 +9.2275% +9.3441%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2274314 +196280 +196278 +9.4455% +9.4454%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2274314 +196280 +196278 +9.4455% +9.4454%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 149562 +38058 +15943 +18203 +17531 +17531 +34.1315% +11.9317% +13.8574% +13.2779% +13.2779%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 125349 +17082 +7997 +10690 +10533 +10533 +15.7777% +6.8145% +9.3233% +9.1738% +9.1738%
MTAC_3P_Standard 110265 118693 115800 116148 116148 127425 +17160 +8732 +11625 +11277 +11277 +15.5625% +7.3568% +10.0389% +9.7092% +9.7092%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56542 +7684 +7510 +7547 +7547 +15.7272% +15.3165% +15.4036% +15.4036%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63144 +9175 +8069 +7304 +7260 +7323 +17.0005% +14.6509% +13.0802% +12.9912% +13.1187%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 57677 +9056 +8012 +7388 +7217 +7262 +18.6257% +16.1321% +14.6911% +14.3024% +14.4044%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 63305 +8245 +7386 +6598 +6478 +6478 +14.9746% +13.2084% +11.6352% +11.3995% +11.3995%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 71569 +20297 +12785 +16522 +12976 +13004 +39.5869% +21.7491% +30.0144% +22.1460% +22.2044%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 19111 +4671 +4153 +3862 +3404 +3404 +32.3476% +27.7644% +25.3263% +21.6719% +21.6719%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 18957 +4474 +3892 +4041 +3887 +3885 +30.8914% +25.8347% +27.0917% +25.7930% +25.7763%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 16126 +7386 +6750 +6737 +6762 +6741 +84.5080% +71.9923% +71.7542% +72.2127% +71.8274%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 16096 +7198 +6837 +6312 +6286 +6286 +80.8946% +73.8417% +64.5135% +64.0775% +64.0775%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 41757 +6892 +5460 +7415 +7332 +7332 +19.7677% +15.0426% +21.5916% +21.2985% +21.2985%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 30930 +6281 +5464 +5811 +5707 +5707 +25.4818% +21.4561% +23.1339% +22.6262% +22.6262%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 43793 +7105 +6117 +6144 +6372 +6334 +19.3660% +16.2358% +16.3192% +17.0279% +16.9092%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 45240 +5084 +3695 +5197 +5347 +5294 +12.6606% +8.8940% +12.9785% +13.4034% +13.2529%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7287 +3621 +3338 +3078 +3041 +3041 +98.7725% +84.5277% +73.1290% +71.6203% +71.6203%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7278 +1979 +1667 +1423 +1212 +1211 +37.3467% +29.7095% +24.3040% +19.9802% +19.9604%
SCP_Astral_250pg_3ms 675 721 908 879 879 3877 +3202 +3156 +2969 +2998 +2998 +474.3704% +437.7254% +326.9824% +341.0694% +341.0694%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 5843 +4407 +4105 +3698 +3680 +3678 +306.8942% +236.1910% +172.4009% +170.1341% +169.8845%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12035 +4241 +4063 +3783 +3629 +3627 +54.4137% +50.9659% +45.8434% +43.1715% +43.1375%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 11722 +2564 +2380 +2351 +2308 +2307 +27.9974% +25.4763% +25.0880% +24.5167% +24.5035%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 7955 +6109 +5355 +5369 +5366 +330.9317% +205.9615% +207.6179% +207.2615%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 11125 +7251 +6970 +6351 +6320 +6321 +187.1709% +167.7497% +133.0331% +131.5297% +131.5779%
SCP_Astral_MBR 24110 24991 24570 24544 24527 29865 +5755 +4874 +5295 +5321 +5338 +23.8698% +19.5030% +21.5507% +21.6794% +21.7638%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 57443 +744 +1650 +1552 +1552 +1.3122% +2.9574% +2.7768% +2.7768%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 62268 +6997 +7121 +12.6594% +12.9128%
EWZ_2P_MBR_Exploris_Human 48465 48473 54233 +5768 +5760 +11.9014% +11.8829%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 57845 +6599 +6668 +12.8771% +13.0293%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 78024 +4746 +4747 +6.4767% +6.4782%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 78024 +4746 +4747 +6.4767% +6.4782%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91804 +3884 -1084 -2178 -1637 -2482 +4.4177% -1.1670% -2.3175% -1.7519% -2.6324%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67297 +3524 +3323 +3686 +4282 +1462 +5.5258% +5.1943% +5.7946% +6.7952% +2.2207%
MTAC_3P_Standard 64317 64464 64219 63385 65967 67994 +3677 +3530 +3775 +4609 +2027 +5.7170% +5.4759% +5.8783% +7.2714% +3.0727%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12913 +846 +943 +973 +674 +7.0109% +7.8780% +8.1491% +5.5070%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13184 +752 +713 +822 +856 +524 +6.0489% +5.7173% +6.6494% +6.9435% +4.1390%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12730 +722 +683 +770 +762 +550 +6.0127% +5.6695% +6.4381% +6.3670% +4.5156%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13307 +746 +842 +830 +897 +533 +5.9390% +6.7549% +6.6522% +7.2280% +4.1725%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 156574 +10350 +3040 +2584 +747 -712 +7.0782% +1.9800% +1.6780% +0.4794% -0.4527%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11165 +2002 +1637 +1580 +1831 +1143 +21.8487% +17.1809% +16.4841% +19.6165% +11.4049%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11229 +1931 +1468 +1817 +1676 +1240 +20.7679% +15.0394% +19.3051% +17.5442% +12.4137%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9274 +6824 +3190 +3027 +3158 +2925 +278.5306% +52.4326% +48.4553% +51.6351% +46.0702%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6361 +1658 +1773 +1403 +1438 +1412 +35.2541% +38.6443% +28.2977% +29.2098% +28.5310%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17328 +1138 +1048 +1303 +1273 +792 +7.0290% +6.4373% +8.1310% +7.9290% +4.7896%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14719 +1120 +878 +1031 +1048 +735 +8.2359% +6.3435% +7.5321% +7.6659% +5.2560%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17506 +1254 +1230 +1389 +1581 +1048 +7.7160% +7.5571% +8.6182% +9.9278% +6.3677%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18120 +1103 +942 +1207 +1375 +771 +6.4818% +5.4838% +7.1365% +8.2114% +4.4441%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5133 +1486 +1220 +1269 +1594 +1319 +40.7458% +31.1781% +32.8416% +45.0410% +34.5831%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5424 +1124 +821 +627 +447 +255 +26.1395% +17.8362% +13.0707% +8.9813% +4.9333%
SCP_Astral_250pg_3ms 576 22 936 741 736 2649 +2073 +2627 +1713 +1908 +1913 +359.8958% +11940.9091% +183.0128% +257.4899% +259.9185%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4260 +3623 +2180 +2231 +2214 +2192 +568.7598% +104.8077% +109.9556% +108.2111% +105.9961%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7651 +1406 +1305 +1635 +1524 +1432 +22.5140% +20.5641% +27.1775% +24.8735% +23.0262%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7616 +894 +887 +604 +593 +274 +13.2996% +13.1818% +8.6138% +8.4437% +3.7320%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5116 +4134 +2751 +2939 +2880 +420.9776% +116.3214% +135.0023% +128.8014%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7226 +3518 +3219 +3181 +3308 +3123 +94.8759% +80.3344% +78.6403% +84.4308% +76.1150%
SCP_Astral_MBR 20165 20129 20074 19793 19898 20613 +448 +484 +539 +820 +715 +2.2217% +2.4045% +2.6851% +4.1429% +3.5933%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4890 +205 +190 +258 +151 +4.3757% +4.0426% +5.5699% +3.1863%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 249727 +4468 +2305 +1.8217% +0.9316%
EWZ_2P_MBR_Exploris_Human 115447 117345 116516 +1069 -829 +0.9260% -0.7065%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 134003 +5035 +3297 +3.9041% +2.5225%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 190405 +12231 +6862 +6.8646% +3.7386%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 190405 +12231 +6862 +6.8646% +3.7386%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8374 +529 +199 +219 +171 +125 +6.7431% +2.4343% +2.6855% +2.0846% +1.5153%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12161 +800 +667 +810 +823 +363 +7.0416% +5.8030% +7.1359% +7.2588% +3.0768%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12321 +848 +761 +844 +925 +489 +7.3913% +6.5830% +7.3538% +8.1169% +4.1329%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4443 +315 +351 +343 +260 +7.6308% +8.5777% +8.3659% +6.2156%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4519 +304 +271 +301 +305 +182 +7.2123% +6.3795% +7.1361% +7.2378% +4.1964%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4390 +315 +256 +300 +293 +205 +7.7301% +6.1925% +7.3350% +7.1516% +4.8984%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4564 +315 +327 +320 +333 +210 +7.4135% +7.7177% +7.5401% +7.8705% +4.8232%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7828 +573 +246 +488 +349 +291 +7.8980% +3.2445% +6.6485% +4.6664% +3.8610%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4027 +782 +638 +616 +709 +466 +24.0986% +18.8256% +18.0592% +21.3683% +13.0862%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4013 +759 +580 +722 +579 +521 +23.3251% +16.8948% +21.9386% +16.8608% +14.9198%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3415 +965 +1019 +965 +1018 +981 +39.3878% +42.5292% +39.3878% +42.4698% +40.3040%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3421 +913 +985 +787 +779 +838 +36.4035% +40.4351% +29.8785% +29.4852% +32.4429%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6018 +439 +362 +514 +472 +364 +7.8688% +6.4003% +9.3387% +8.5106% +6.4379%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5143 +422 +305 +360 +332 +299 +8.9388% +6.3043% +7.5267% +6.9009% +6.1726%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6127 +516 +472 +531 +574 +414 +9.1962% +8.3466% +9.4889% +10.3368% +7.2466%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6277 +431 +328 +434 +472 +312 +7.3726% +5.5135% +7.4277% +8.1309% +5.2305%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 1941 +649 +517 +535 +653 +582 +50.2322% +36.3062% +38.0512% +50.6988% +42.8256%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 1970 +402 +310 +212 +97 +100 +25.6378% +18.6747% +12.0592% +5.1789% +5.3476%
SCP_Astral_250pg_3ms 307 8 350 283 281 1110 +803 +1102 +760 +827 +829 +261.5635% +13775% +217.1429% +292.2261% +295.0178%
SCP_Astral_250pg_6ms 637 756 751 766 767 1630 +993 +874 +879 +864 +863 +155.8870% +115.6085% +117.0439% +112.7937% +112.5163%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2778 +571 +503 +609 +548 +561 +25.8722% +22.1099% +28.0775% +24.5740% +25.3045%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2753 +350 +365 +276 +214 +155 +14.5651% +15.2848% +11.1425% +8.4285% +5.9661%
SCP_Astral_500pg_3ms 525 902 828 835 2018 +1493 +1116 +1190 +1183 +284.3810% +123.7251% +143.7198% +141.6766%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2662 +1344 +1215 +1176 +1227 +1194 +101.9727% +83.9668% +79.1386% +85.5052% +81.3351%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4976 +268 +256 +264 +261 +260 +5.6924% +5.4237% +5.6027% +5.5355% +5.5131%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4890 +205 +190 +258 +151 +4.3757% +4.0426% +5.5699% +3.1863%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7234 +193 +128 +2.7411% +1.8013%
EWZ_2P_MBR_Exploris_Human 6167 6284 6251 +84 -33 +1.3621% -0.5251%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7242 +355 +279 +5.1546% +4.0069%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6172 +368 +217 +6.3405% +3.6440%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6172 +368 +217 +6.3405% +3.6440%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91795 -2484
MTAC_3P_Alternating 65832 67296 +1464
MTAC_3P_Standard 65967 67988 +2021
MTAC_Yeast_Alternating_3min 12239 12907 +668
MTAC_Yeast_Alternating_5min 12660 13184 +524
MTAC_Yeast_Standard_3min 12180 12728 +548
MTAC_Yeast_Standard_5min 12772 13300 +528
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 156568 -717
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11163 +1141
SCP_Astral_1000pg_24ms 9989 11228 +1239
SCP_Astral_1000pg_3ms 6349 9272 +2923
SCP_Astral_1000pg_6ms 4949 6361 +1412
SCP_Astral_10ng_12ms 16536 17325 +789
SCP_Astral_10ng_24ms 13982 14719 +737
SCP_Astral_10ng_3ms 16458 17501 +1043
SCP_Astral_10ng_6ms 17349 18117 +768
SCP_Astral_250pg_12ms 3814 5133 +1319
SCP_Astral_250pg_24ms 5169 5424 +255
SCP_Astral_250pg_3ms 736 2649 +1913
SCP_Astral_250pg_6ms 2066 4260 +2194
SCP_Astral_500pg_12ms 6219 7649 +1430
SCP_Astral_500pg_24ms 7342 7616 +274
SCP_Astral_500pg_3ms 2234 5112 +2878
SCP_Astral_500pg_6ms 4103 7226 +3123
SCP_Astral_MBR 19891 20613 +722
Seer_Astral_45 242898
Seer_Astral_single 4739 4890 +151
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 249722 +2300
EWZ_2P_MBR_Exploris_Human 117340 116512 -828
EWZ_2P_MBR_Exploris_YeastHuman 130702 134000 +3298
MacCoss_Eclipse_Normalization_noNorm 183540 190405 +6865
MacCoss_Eclipse_Normalization_yesNorm 183540 190405 +6865

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0005 +0.0007 +0.0007
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0006 +0.0000 +0.0000
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0016 -0.0011 -0.0015 -0.0006 -0.0009 -0.0009
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0010 +0.0004 -0.0014 -0.0004 -0.0002 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0011 +0.0004 +0.0008 +0.0015 +0.0015
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0005 -0.0001 +0.0007 +0.0009 +0.0009 +0.0009
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0008 +0.0011 +0.0006 +0.0005 +0.0013 +0.0013
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0002 +0.0012 +0.0021 +0.0026 +0.0027
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0003 -0.0009 -0.0009
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0002 +0.0004 -0.0001 +0.0013 -0.0003 -0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0004 +0.0019 +0.0026 +0.0016
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0008 +0.0062 +0.0041 +0.0040 +0.0054 +0.0054
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0025 +0.0055 +0.0073 +0.0055 +0.0064 +0.0071
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 -0.0013 -0.0011 -0.0002 +0.0023 +0.0013 +0.0013
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0002 +0.0024 +0.0019 +0.0026 +0.0026
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0004 +0.0016 -0.0013 +0.0011 +0.0009 +0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0008 +0.0016 +0.0018 +0.0010 +0.0009 +0.0009
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0001 +0.0009 +0.0001 +0.0023 +0.0013 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0033 +0.0071 +0.0073 +0.0030 +0.0085 +0.0085
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0014 -0.0012 -0.0002 +0.0010 +0.0017 +0.0017
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0022 +0.0090 +0.0022 +0.0022
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 -0.0011 +0.0040 +0.0016 +0.0039 +0.0034
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0027 -0.0006 -0.0018 +0.0000 -0.0001 -0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0009 +0.0022 +0.0033 +0.0021 +0.0020 +0.0020
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 -0.0002 +0.0011 +0.0021 +0.0033 +0.0033
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0005 +0.0036 +0.0038 +0.0020 +0.0020
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0000 +0.0026 +0.0020 +0.0014 +0.0022 +0.0022
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0006 +0.0027 +0.0027
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0006 +0.0020 +0.0022
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0041 -0.0011 -0.0027
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0043 -0.0033 -0.0032 -0.0048 -0.0050 -0.0032
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0026 -0.0013 -0.0001 +0.0003 -0.0000 +0.0017
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0019 +0.0047 +0.0034 +0.0029 +0.0025
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0020 +0.0062 +0.0059 +0.0069 +0.0054 +0.0078
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0042 +0.0016 +0.0005 -0.0023 -0.0015 -0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0007 +0.0029 +0.0038 +0.0049 +0.0048
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0019 -0.0016 +0.0012
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0008 +0.0021 -0.0006 +0.0020 +0.0001 +0.0009
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0035 +0.0014 +0.0007 +0.0008 +0.0006
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0030 +0.0040 +0.0029 +0.0040 +0.0041 +0.0054
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0009 +0.0050 +0.0050 +0.0063 +0.0063 +0.0078
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0010 +0.0028 +0.0060 +0.0053 +0.0055 +0.0057
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0011 +0.0044 +0.0029 +0.0043 +0.0050
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0038 -0.0006 -0.0015 -0.0022 +0.0007 -0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0009 +0.0028 +0.0064 +0.0058 +0.0052 +0.0052
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0040 +0.0014 -0.0021 +0.0013 +0.0006 +0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0006 +0.0059 +0.0082 +0.0040 +0.0069 +0.0067
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0011 +0.0030 +0.0030 +0.0014 +0.0001 +0.0031
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0079 +0.0106 +0.0079 +0.0164 +0.0079 +0.0079
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 -0.0017 +0.0081 +0.0049 +0.0067 +0.0071 +0.0071
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0017 +0.0019 +0.0023 -0.0031 +0.0004 +0.0007
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0017 +0.0003 -0.0016 +0.0034 +0.0045 +0.0043
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0047 +0.0088 -0.0024 +0.0027 +0.0048 +0.0049
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0001 +0.0046 +0.0046 +0.0008 +0.0056 +0.0043
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0019 +0.0040 +0.0011 +0.0006 +0.0031 +0.0037
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 -0.0004 +0.0070 +0.0069
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0002 +0.0010 +0.0010
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0000 +0.0003 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0006 -0.0004 -0.0008 -0.0004 -0.0004 -0.0004
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0001 +0.0008 -0.0003 +0.0003 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0007 +0.0003 +0.0006 +0.0007 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0003 +0.0007 +0.0010 +0.0013 +0.0011 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0004 +0.0005 +0.0004 +0.0004 +0.0007 +0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0003 +0.0011 +0.0013 +0.0018 +0.0018
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0004 +0.0001 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0007 +0.0011 +0.0002 +0.0013 +0.0007 +0.0007
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0001 +0.0014 +0.0028 +0.0017
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0004 +0.0049 +0.0032 +0.0035 +0.0041 +0.0041
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0022 +0.0042 +0.0051 +0.0047 +0.0048 +0.0056
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 -0.0004 -0.0006 +0.0002 +0.0024 +0.0020 +0.0020
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0005 +0.0022 +0.0015 +0.0021 +0.0021
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0000 +0.0013 -0.0004 +0.0012 +0.0008 +0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0003 +0.0017 +0.0018 +0.0013 +0.0012 +0.0012
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0000 +0.0005 -0.0002 +0.0012 +0.0009 +0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0017 +0.0047 +0.0044 +0.0019 +0.0048 +0.0048
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0003 +0.0004 +0.0005 +0.0010 +0.0011 +0.0011
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0026 +0.0085 +0.0026 +0.0026
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0003 +0.0040 +0.0024 +0.0033 +0.0033
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0005 +0.0013 -0.0002 +0.0015 +0.0008 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0013 +0.0028 +0.0030 +0.0030 +0.0029 +0.0029
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0015 -0.0004 +0.0018 +0.0030 +0.0030
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0009 +0.0035 +0.0028 +0.0019 +0.0019
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0008 +0.0025 +0.0023 +0.0016 +0.0021 +0.0021
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0006 +0.0027 +0.0027
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0001 +0.0013 +0.0014
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0019 -0.0002 -0.0013
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0021 -0.0020 -0.0019 -0.0024 -0.0024 -0.0016
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0018 -0.0010 -0.0005 +0.0002 +0.0000 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0010 +0.0026 +0.0023 +0.0019 +0.0011
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0021 +0.0059 +0.0043 +0.0046 +0.0035 +0.0046
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0020 +0.0018 +0.0015 -0.0006 -0.0004 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0011 +0.0012 +0.0016 +0.0026 +0.0023
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0002 +0.0003 +0.0019
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0002 +0.0024 -0.0008 +0.0015 +0.0014 +0.0017
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0021 +0.0016 +0.0002 +0.0012 +0.0019
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0021 +0.0027 +0.0034 +0.0037 +0.0022 +0.0038
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0007 +0.0037 +0.0026 +0.0033 +0.0024 +0.0057
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0004 +0.0028 +0.0038 +0.0044 +0.0044 +0.0036
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0010 +0.0037 +0.0020 +0.0031 +0.0034
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0028 +0.0004 -0.0015 -0.0014 -0.0003 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0018 +0.0003 +0.0028 +0.0019 +0.0014 +0.0022
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0030 +0.0009 -0.0011 +0.0008 -0.0001 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0011 +0.0049 +0.0052 +0.0030 +0.0041 +0.0055
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0021 -0.0008 +0.0011 -0.0018 -0.0021 +0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0049 +0.0109 +0.0131 +0.0096 +0.0049 +0.0049
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 -0.0020 +0.0080 +0.0048 +0.0035 +0.0028 +0.0028
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0006 +0.0034 +0.0030 +0.0002 +0.0022 +0.0017
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0014 +0.0006 -0.0014 +0.0030 +0.0031 +0.0054
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0032 +0.0064 -0.0034 +0.0004 +0.0029 +0.0030
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0016 +0.0036 +0.0038 +0.0007 +0.0044 +0.0034
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0005 +0.0018 +0.0012 +0.0017 +0.0023 +0.0035
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 -0.0003 +0.0071 +0.0066
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 16098 -8297 -8490

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 242 -529 -520

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0150 -0.0166 -0.0160

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 -792 -1636 -163

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -100 -290 -156

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1675 +0.0216 +0.0254 +0.0274 +0.0301 +0.0300
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1611 +0.0218 +0.0248 +0.0259 +0.0287 +0.0286
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1638 +0.0182 +0.0213 +0.0230 +0.0229
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1536 +0.0006 +0.0127 +0.0160 +0.0180 +0.0182
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1748 +0.0050 +0.0109 +0.0133 +0.0149 +0.0150
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1507 +0.0004 +0.0141 +0.0170 +0.0184 +0.0183
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1540 +0.0060 +0.0041 +0.0045 +0.0035 +0.0034
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5971 +0.0102 +0.0102
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2107 +0.0390 +0.0389

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0848 +0.0085 +0.0109 +0.0121 +0.0128 +0.0091
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0818 +0.0095 +0.0116 +0.0119 +0.0130 +0.0101
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0748 +0.0075 +0.0088 +0.0090 +0.0061
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0662 -0.0116 +0.0059 +0.0070 +0.0074 +0.0061
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0801 +0.0009 +0.0045 +0.0048 +0.0028 +0.0026
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0629 -0.0142 +0.0061 +0.0060 +0.0060 +0.0045
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1010 -0.0018 -0.0009 -0.0026 -0.0017 -0.0023
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5787 -0.0094 -0.0092
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1348 +0.0115 +0.0102

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0097 -0.0020 +0.0070 +0.0012 +0.0000 -0.0680
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0032 -0.0076 +0.0055 -0.0002 -0.0001 -0.0375
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0008 +0.0007 -0.0023 -0.0001 -0.0000 -0.0000
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0628 +0.0012 -0.0008 +0.0020 -0.0002 -0.0638
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0588 -0.0054 -0.0006 -0.0003 +0.0001 -0.0136
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0507 -0.0080 +0.0050 -0.0016 -0.0001 +0.0217
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1280 -0.0059 -0.0059 +0.0211 -0.0012 -0.1073
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0807 +0.0062 +0.0047 -0.0191 -0.0001 +0.0203
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1974 +0.0183 -0.0240 +0.0287 +0.0020 -0.0831
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1040 +0.0048 -0.0054 -0.0067 +0.0002 +0.0155
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0466 +0.0009 +0.0001 -0.0089 -0.0000 +0.0010
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2076 +0.0051 -0.0017 +0.0004 +0.0004 +0.0036
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1316 -0.0032 -0.0062 -0.0160 +0.0006 +0.1085
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0800 +0.0043 -0.0045 -0.0054 -0.0001 -0.0219
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0357 +0.0169 -0.0238 +0.0355 +0 -0.0608
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0164 +0.0009 +0.0076 -0.0005 +0.0006 -0.0576
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0008 -0.0089 +0.0045 +0.0004 +0.0011 -0.0414
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0150 +0.0054 -0.0044 +0.0010 +0.0033 +0.0081
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0545 +0.0013 +0.0005 -0.0055 +0.0004 -0.0665
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0573 -0.0060 -0.0005 -0.0005 -0.0005 -0.0123
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0510 -0.0084 +0.0078 -0.0007 +0.0020 +0.0180
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1671 -0.0077 -0.0028 +0.0144 -0.0004 -0.0536
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0750 +0.0048 +0.0016 -0.0170 -0.0057 +0.0250
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2327 +0.0504 -0.0481 +0.0073 +0.0089 -0.0417
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1030 +0.0031 -0.0032 -0.0081 +0.0006 +0.0265
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0442 +0.0011 -0.0008 -0.0084 -0.0000 +0.0021
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2188 +0.0036 -0.0008 +0.0016 +0.0018 +0.0137
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1132 +0.0005 -0.0096 -0.0297 +0.0070 +0.1016
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0807 +0.0056 -0.0034 -0.0033 +0.0038 -0.0315
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0522 +0.0405 -0.0089 +0.0322 +0.0276 -0.0927
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1403 +0.0343 +0.0202 -0.0086 +0.0005 -0.1680
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1220 +0.0169 -0.0058 +0.0004 +0.0004 -0.0883
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1252 +0.0117 -0.0078 +0.0011 -0.0001 -0.1355
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1402 +0.0441 -0.0007 -0.0136 +0.0007 -0.1585
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1328 +0.0164 -0.0031 -0.0002 +0.0007 -0.0871
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1359 +0.0170 -0.0063 +0.0017 +0.0006 -0.1327
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2073 +0.0445 +0.0761 -0.1281 +0.0017 -0.3653
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0436 -0.0103 +0.0134 -0.0147 -0.0018 -0.1058
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2999 -0.0030 +0.1483 +0.0078 -0.0120 -0.6455
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1879 +0.0037 +0.0045 +0.0051 +0.0002 -0.1627
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0431 +0.0676 -0.0087 -0.0168 +0.0006 -0.1092
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1865 +0.0316 +0.0062 -0.0049 +0.0001 -0.1489
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2251 -0.0093 +0.0378 -0.0706 +0.0033 -0.3549
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0646 +0.0977 -0.0155 +0.0159 +0.0001 -0.1834
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5742 +0.0737 +0.1982 -0.0827 -0.0008 -0.7002
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0625 +0.0149 -0.0182 -0.0054 +0.1015 -0.1598
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0398 +0.0035 +0.0005 +0.0043 +0.0189 -0.0605
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0530 -0.0157 -0.0104 +0.0083 +0.0352 -0.0944
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0548 -0.0042 +0.0002 -0.0084 +0.0711 -0.1359
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0389 +0.0032 -0.0030 +0.0035 +0.0313 -0.0640
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0531 +0.0000 +0.0073 -0.0081 +0.0305 -0.1028
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0432 +0.0146 +0.0452 -0.0355 +0.0761 -0.2605
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0163 -0.0057 -0.0062 -0.0031 +0.0154 -0.0476
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0553 -0.1294 +0.1626 +0.0090 +0.0813 -0.5265
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0331 -0.0046 +0.0074 +0.0016 +0.0039 -0.0399
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0095 +0.0109 -0.0066 +0.0090 -0.0065 -0.0274
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0407 -0.0053 +0.0093 +0.0025 +0.0083 -0.0499
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0899 -0.0166 +0.0170 -0.0166 +0.0315 -0.1591
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0219 +0.0068 -0.0006 -0.0039 +0.0560 -0.1078
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.2681 -0.0891 -0.0032 -0.0082 +0.0618 -0.2242
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 16.5200 -7.5500 -0.8000 -3.3500 -0.6100 -2.5100 -31.3668% -4.6189% -16.8596% -3.5610% -13.1897%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 7.2700 -5.4800 -1.8000 -1.0900 -2.0200 -0.8600 -42.9804% -19.8456% -13.0383% -21.7438% -10.5781%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 8.7700 -3.5400 -0.1900 -0.8900 -2.0400 -1.0200 -28.7571% -2.1205% -9.2133% -18.8714% -10.4188%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.3200 +0.0900 -0.0900 -0.6200 +0.0400 +2.1277% -2.0408% -12.5506% +0.9346%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.9400 -0.4400 +0.5600 +0.1900 +0.4000 +0.3800 -8.1784% +12.7854% +4.0000% +8.8106% +8.3333%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.3400 -1.0900 +0.2000 -0.1000 -0.3200 +0.1000 -20.0737% +4.8309% -2.2523% -6.8670% +2.3585%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.0400 -0.5100 +0.6200 +0.5100 +0.5800 +0.5000 -9.1892% +14.0271% +11.2583% +13.0045% +11.0132%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 13.6100 -14.0500 -6.1500 -4.7100 -5.6700 -4.2900 -50.7954% -31.1235% -25.7096% -29.4087% -23.9665%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.2100 -1.5800 -0.3800 -0.4400 +0.1200 -0.1500 -27.2884% -8.2789% -9.4624% +2.9340% -3.4404%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 4.6900 -1.5700 +0.2900 -1.1900 -0.3200 -25.0799% +6.5909% -20.2381% -6.3872%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.4000 -0.1200 +0.6700 -0.4000 +0.7600 +0.5700 -2.6549% +17.9625% -8.3333% +20.8791% +14.8825%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 3.8200 -1.9200 +0.3100 -0.1000 +0.3800 +0.1000 -33.4495% +8.8319% -2.5510% +11.0465% +2.6882%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 5.6200 -1.4500 +0.0900 +0.1100 -0.1200 +0.1500 -20.5092% +1.6275% +1.9964% -2.0906% +2.7422%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 5.2300 -2.3600 -0.5000 -0.9100 -0.3100 -0.6600 -31.0935% -8.7260% -14.8208% -5.5957% -11.2054%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 4.7100 -1.7400 +0.0400 +0.4100 +0.3000 +0.2900 -26.9767% +0.8565% +9.5349% +6.8027% +6.5611%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.0700 -2.3100 +0.1400 +0.4400 -0.5500 +0.1100 -31.3008% +2.8398% +9.5032% -9.7865% +2.2177%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.1000 -0.6400 +0.4400 +0.7100 +0.5100 -13.5021% +12.0219% +20.9440% +14.2061%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.2400 -1.0200 +0.4000 +0.4800 +0.1800 -19.3916% +10.4167% +12.7660% +4.4335%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 3.7600 -0.8900 +0.3300 +0.0500 +0.3100 +0.2100 -19.1398% +9.6210% +1.3477% +8.9855% +5.9155%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.1500 -0.0200 +0.8600 +0.4600 +0.8800 +0.6300 -0.4796% +26.1398% +12.4661% +26.9113% +17.8977%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.2500 -1.0300 +0.7200 +0.6500 +0.7600 +0.5500 -19.5076% +20.3966% +18.0556% +21.7765% +14.8649%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.4700 -1.0400 +0.6500 +0.3200 -0.3400 +0.4400 -18.8748% +17.0157% +7.7108% -7.0686% +10.9181%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.1800 -0.5500 +0.7200 +0.6100 +0.4100 -11.6279% +20.8092% +17.0868% +10.8753%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.4600 -0.1900 +0.8400 +0.7300 +0.6800 +0.9600 -4.0860% +23.2044% +19.5710% +17.9894% +27.4286%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 6.6800 -2.3600 +0.1300 +0.5800 -0.5300 -26.1062% +1.9847% +9.5082% -7.3509%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.0800 -0.3900 -0.0600 -1.5000 -1.1400 -8.7248% -1.4493% -26.8817% -21.8391%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 20.4800 -5.7000 -3.8000 -21.7723% -15.6507%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 11.4900 -1.4200 -0.9300 -10.9992% -7.4879%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 11.9000 -0.1600 -2.5100 -1.3267% -17.4185%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 27.4300 -0.0800 -0.8500 -0.2908% -3.0057%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 28.1800 +0.5100 -0.3200 +1.8432% -1.1228%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png