Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1344294 +247800 +37289 +32339 +50753 +50753 +22.5993% +2.8530% +2.4649% +3.9236% +3.9236%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 650990 +64668 +35228 +40280 +51109 +51109 +11.0294% +5.7210% +6.5956% +8.5199% +8.5199%
MTAC_3P_Standard 596590 623022 617574 607435 607435 655685 +59095 +32663 +38111 +48250 +48250 +9.9055% +5.2427% +6.1711% +7.9432% +7.9432%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 150554 +13006 +13715 +14994 +14994 +9.4556% +10.0227% +11.0608% +11.0608%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 171754 +16113 +15203 +15245 +16719 +16910 +10.3527% +9.7112% +9.7407% +10.7840% +10.9207%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 153634 +15125 +14249 +14342 +15749 +15847 +10.9199% +10.2228% +10.2964% +11.4218% +11.5011%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 171946 +12984 +13214 +12786 +14024 +14024 +8.1680% +8.3247% +8.0334% +8.8803% +8.8803%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1324092 +301356 +169423 +200219 +140008 +140008 +29.4657% +14.6729% +17.8151% +11.8242% +11.8242%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 52327 +11445 +10627 +9902 +10227 +10227 +27.9952% +25.4844% +23.3400% +24.2922% +24.2922%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 50898 +9829 +8496 +8875 +9746 +9746 +23.9329% +20.0368% +21.1194% +23.6829% +23.6829%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 41355 +32615 +18240 +18340 +18442 +18442 +373.1693% +78.9098% +79.6872% +80.4871% +80.4871%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 29196 +12261 +11643 +10787 +10848 +10848 +72.4004% +66.3305% +58.5963% +59.1236% +59.1236%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 117043 +17135 +14152 +18060 +18395 +18395 +17.1508% +13.7544% +18.2456% +18.6471% +18.6471%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 85478 +14380 +12750 +14033 +14352 +14352 +20.2256% +17.5311% +19.6417% +20.1783% +20.1783%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 122632 +16928 +16135 +17010 +18198 +18120 +16.0145% +15.1507% +16.1046% +17.4254% +17.3377%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 130159 +15002 +12843 +15837 +17078 +16909 +13.0274% +10.9474% +13.8530% +15.1024% +14.9307%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 18896 +8702 +8090 +7658 +7663 +7663 +85.3639% +74.8658% +68.1438% +68.2186% +68.2186%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 19321 +4514 +3888 +3280 +3622 +3622 +30.4856% +25.1928% +20.4476% +23.0715% +23.0715%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8285 +7024 +6253 +5835 +5899 +5899 +557.0182% +307.7264% +238.1633% +247.2339% +247.2339%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14821 +13385 +10038 +9131 +9090 +9090 +932.1031% +209.8683% +160.4745% +158.6111% +158.6111%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 31094 +9384 +9199 +8514 +8631 +8631 +43.2243% +42.0142% +37.7059% +38.4232% +38.4232%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 31448 +5588 +5305 +5188 +5823 +5823 +21.6087% +20.2922% +19.7563% +22.7239% +22.7239%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 18883 +15399 +11985 +12049 +12049 +441.9920% +173.7460% +176.3096% +176.3096%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 26914 +16215 +15440 +14032 +14025 +14025 +151.5562% +134.5651% +108.9272% +108.8137% +108.8137%
SCP_Astral_MBR 92167 93585 91884 90864 90838 109760 +17593 +16175 +17876 +18896 +18922 +19.0882% +17.2838% +19.4550% +20.7959% +20.8305%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 58369 +1670 +2576 +2478 +2478 +2.9454% +4.6171% +4.4336% +4.4336%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1917039 +140911 +141693 +7.9336% +7.9811%
EWZ_2P_MBR_Exploris_Human 836809 836809 896874 +60065 +60065 +7.1779% +7.1779%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 999274 +84350 +85325 +9.2193% +9.3359%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2279403 +201369 +201367 +9.6904% +9.6903%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2279403 +201369 +201367 +9.6904% +9.6903%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 149353 +37849 +15734 +17994 +17322 +17322 +33.9441% +11.7753% +13.6983% +13.1196% +13.1196%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 124814 +16547 +7462 +10155 +9998 +9998 +15.2835% +6.3586% +8.8567% +8.7078% +8.7078%
MTAC_3P_Standard 110265 118693 115800 116148 116148 126623 +16358 +7930 +10823 +10475 +10475 +14.8352% +6.6811% +9.3463% +9.0187% +9.0187%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56246 +7388 +7214 +7251 +7251 +15.1214% +14.7128% +14.7995% +14.7995%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63429 +9460 +8354 +7589 +7545 +7608 +17.5286% +15.1684% +13.5906% +13.5012% +13.6293%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 57671 +9050 +8006 +7382 +7211 +7256 +18.6134% +16.1200% +14.6792% +14.2905% +14.3925%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 63279 +8219 +7360 +6572 +6452 +6452 +14.9274% +13.1619% +11.5894% +11.3538% +11.3538%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 72277 +21005 +13493 +17230 +13684 +13712 +40.9678% +22.9535% +31.3005% +23.3543% +23.4133%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 19722 +5282 +4764 +4473 +4015 +4015 +36.5789% +31.8492% +29.3331% +25.5619% +25.5619%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 18880 +4397 +3815 +3964 +3810 +3808 +30.3597% +25.3236% +26.5755% +25.2820% +25.2654%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 16730 +7990 +7354 +7341 +7366 +7345 +91.4188% +78.4343% +78.1872% +78.6630% +78.2632%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 16712 +7814 +7453 +6928 +6902 +6902 +87.8175% +80.4947% +70.8095% +70.3568% +70.3568%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 42031 +7166 +5734 +7689 +7606 +7606 +20.5536% +15.7974% +22.3895% +22.0944% +22.0944%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 31237 +6588 +5771 +6118 +6014 +6014 +26.7273% +22.6616% +24.3561% +23.8433% +23.8433%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 44618 +7930 +6942 +6969 +7197 +7159 +21.6147% +18.4255% +18.5105% +19.2325% +19.1116%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 46579 +6423 +5034 +6536 +6686 +6633 +15.9951% +12.1170% +16.3225% +16.7598% +16.6049%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7615 +3949 +3666 +3406 +3369 +3369 +107.7196% +92.8336% +80.9218% +79.3453% +79.3453%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7702 +2403 +2091 +1847 +1636 +1635 +45.3482% +37.2661% +31.5457% +26.9700% +26.9491%
SCP_Astral_250pg_3ms 675 721 908 879 879 3866 +3191 +3145 +2958 +2987 +2987 +472.7407% +436.1997% +325.7709% +339.8180% +339.8180%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6231 +4795 +4493 +4086 +4068 +4066 +333.9136% +258.5155% +190.4895% +188.0721% +187.8060%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12328 +4534 +4356 +4076 +3922 +3920 +58.1730% +54.6412% +49.3941% +46.6571% +46.6223%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12046 +2888 +2704 +2675 +2632 +2631 +31.5353% +28.9446% +28.5455% +27.9584% +27.9448%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8307 +6461 +5707 +5721 +5718 +350% +219.5000% +221.2297% +220.8575%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 10814 +6940 +6659 +6040 +6009 +6010 +179.1430% +160.2647% +126.5186% +125.0572% +125.1041%
SCP_Astral_MBR 24110 24991 24570 24544 24527 30102 +5992 +5111 +5532 +5558 +5575 +24.8528% +20.4514% +22.5153% +22.6450% +22.7301%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 58369 +1670 +2576 +2478 +2478 +2.9454% +4.6171% +4.4336% +4.4336%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 61692 +6421 +6545 +11.6173% +11.8683%
EWZ_2P_MBR_Exploris_Human 48465 48473 53697 +5232 +5224 +10.7954% +10.7771%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 57280 +6034 +6103 +11.7746% +11.9253%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 78724 +5446 +5447 +7.4320% +7.4334%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 78724 +5446 +5447 +7.4320% +7.4334%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91926 +4006 -962 -2056 -1515 -2360 +4.5564% -1.0357% -2.1877% -1.6213% -2.5030%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67402 +3629 +3428 +3791 +4387 +1567 +5.6905% +5.3584% +5.9597% +6.9618% +2.3802%
MTAC_3P_Standard 64317 64464 64219 63385 65967 67895 +3578 +3431 +3676 +4510 +1928 +5.5631% +5.3224% +5.7242% +7.1152% +2.9227%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12847 +780 +877 +907 +608 +6.4639% +7.3266% +7.5963% +4.9677%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13169 +737 +698 +807 +841 +509 +5.9282% +5.5970% +6.5281% +6.8219% +4.0205%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12735 +727 +688 +775 +767 +555 +6.0543% +5.7110% +6.4799% +6.4088% +4.5567%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13237 +676 +772 +760 +827 +463 +5.3817% +6.1933% +6.0912% +6.6640% +3.6245%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 157844 +11620 +4310 +3854 +2017 +558 +7.9467% +2.8072% +2.5028% +1.2944% +0.3548%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11302 +2139 +1774 +1717 +1968 +1280 +23.3439% +18.6188% +17.9134% +21.0842% +12.7719%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11277 +1979 +1516 +1865 +1724 +1288 +21.2841% +15.5312% +19.8151% +18.0467% +12.8942%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9394 +6944 +3310 +3147 +3278 +3045 +283.4286% +54.4050% +50.3762% +53.5971% +47.9603%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6646 +1943 +2058 +1688 +1723 +1697 +41.3141% +44.8561% +34.0460% +34.9990% +34.2898%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17511 +1321 +1231 +1486 +1456 +975 +8.1594% +7.5614% +9.2730% +9.0688% +5.8962%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14896 +1297 +1055 +1208 +1225 +912 +9.5375% +7.6223% +8.8252% +8.9606% +6.5217%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17686 +1434 +1410 +1569 +1761 +1228 +8.8235% +8.6631% +9.7351% +11.0581% +7.4614%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18274 +1257 +1096 +1361 +1529 +925 +7.3867% +6.3803% +8.0471% +9.1311% +5.3317%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5280 +1633 +1367 +1416 +1741 +1466 +44.7765% +34.9348% +36.6460% +49.1947% +38.4373%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5739 +1439 +1136 +942 +762 +570 +33.4651% +24.6796% +19.6373% +15.3104% +11.0273%
SCP_Astral_250pg_3ms 576 22 936 741 736 2672 +2096 +2650 +1736 +1931 +1936 +363.8889% +12045.4545% +185.4701% +260.5938% +263.0435%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4114 +3477 +2034 +2085 +2068 +2046 +545.8399% +97.7885% +102.7600% +101.0753% +98.9362%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7731 +1486 +1385 +1715 +1604 +1512 +23.7950% +21.8248% +28.5073% +26.1792% +24.3126%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7823 +1101 +1094 +811 +800 +481 +16.3791% +16.2580% +11.5659% +11.3911% +6.5513%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5242 +4260 +2877 +3065 +3006 +433.8086% +121.6490% +140.7901% +134.4365%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7112 +3404 +3105 +3067 +3194 +3009 +91.8015% +77.4894% +75.8220% +81.5212% +73.3366%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21058 +893 +929 +984 +1265 +1160 +4.4285% +4.6152% +4.9019% +6.3911% +5.8297%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4931 +246 +231 +299 +192 +5.2508% +4.9149% +6.4551% +4.0515%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 249019 +3760 +1597 +1.5331% +0.6455%
EWZ_2P_MBR_Exploris_Human 115447 117345 115879 +432 -1466 +0.3742% -1.2493%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 132928 +3960 +2222 +3.0705% +1.7000%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 191388 +13214 +7845 +7.4163% +4.2742%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 191388 +13214 +7845 +7.4163% +4.2742%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8369 +524 +194 +214 +166 +120 +6.6794% +2.3731% +2.6242% +2.0236% +1.4547%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12150 +789 +656 +799 +812 +352 +6.9448% +5.7073% +7.0390% +7.1618% +2.9836%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12274 +801 +714 +797 +878 +442 +6.9816% +6.1765% +6.9443% +7.7045% +3.7356%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4420 +292 +328 +320 +237 +7.0736% +8.0156% +7.8049% +5.6658%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4516 +301 +268 +298 +302 +179 +7.1412% +6.3089% +7.0650% +7.1666% +4.1273%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4377 +302 +243 +287 +280 +192 +7.4110% +5.8781% +7.0171% +6.8343% +4.5878%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4532 +283 +295 +288 +301 +178 +6.6604% +6.9625% +6.7861% +7.1142% +4.0882%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7924 +669 +342 +584 +445 +387 +9.2212% +4.5107% +7.9564% +5.9500% +5.1347%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4053 +808 +664 +642 +735 +492 +24.8998% +19.5928% +18.8215% +22.1519% +13.8163%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4003 +749 +570 +712 +569 +511 +23.0178% +16.6036% +21.6348% +16.5696% +14.6334%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3504 +1054 +1108 +1054 +1107 +1070 +43.0204% +46.2437% +43.0204% +46.1827% +43.9606%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3566 +1058 +1130 +932 +924 +983 +42.1850% +46.3875% +35.3834% +34.9735% +38.0565%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6049 +470 +393 +545 +503 +395 +8.4244% +6.9484% +9.9019% +9.0696% +6.9862%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5183 +462 +345 +400 +372 +339 +9.7861% +7.1310% +8.3630% +7.7323% +6.9983%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6170 +559 +515 +574 +617 +457 +9.9626% +9.1070% +10.2573% +11.1111% +7.9993%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6294 +448 +345 +451 +489 +329 +7.6634% +5.7993% +7.7186% +8.4238% +5.5155%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2021 +729 +597 +615 +733 +662 +56.4241% +41.9242% +43.7411% +56.9099% +48.7123%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2112 +544 +452 +354 +239 +242 +34.6939% +27.2289% +20.1365% +12.7603% +12.9412%
SCP_Astral_250pg_3ms 307 8 350 283 281 1082 +775 +1074 +732 +799 +801 +252.4430% +13425% +209.1429% +282.3322% +285.0534%
SCP_Astral_250pg_6ms 637 756 751 766 767 1573 +936 +817 +822 +807 +806 +146.9388% +108.0688% +109.4541% +105.3525% +105.0847%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2847 +640 +572 +678 +617 +630 +28.9986% +25.1429% +31.2586% +27.6682% +28.4168%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2825 +422 +437 +348 +286 +227 +17.5614% +18.2998% +14.0493% +11.2643% +8.7375%
SCP_Astral_500pg_3ms 525 902 828 835 2026 +1501 +1124 +1198 +1191 +285.9048% +124.6120% +144.6860% +142.6347%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2614 +1296 +1167 +1128 +1179 +1146 +98.3308% +80.6496% +75.9085% +82.1603% +78.0654%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5093 +385 +373 +381 +378 +377 +8.1776% +7.9025% +8.0857% +8.0170% +7.9941%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4931 +246 +231 +299 +192 +5.2508% +4.9149% +6.4551% +4.0515%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7191 +150 +85 +2.1304% +1.1962%
EWZ_2P_MBR_Exploris_Human 6167 6284 6166 -1 -118 -0.0162% -1.8778%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7144 +257 +181 +3.7317% +2.5995%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6258 +454 +303 +7.8222% +5.0882%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6258 +454 +303 +7.8222% +5.0882%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91918 -2361
MTAC_3P_Alternating 65832 67397 +1565
MTAC_3P_Standard 65967 67891 +1924
MTAC_Yeast_Alternating_3min 12239 12841 +602
MTAC_Yeast_Alternating_5min 12660 13164 +504
MTAC_Yeast_Standard_3min 12180 12733 +553
MTAC_Yeast_Standard_5min 12772 13233 +461
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 157838 +553
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11300 +1278
SCP_Astral_1000pg_24ms 9989 11277 +1288
SCP_Astral_1000pg_3ms 6349 9385 +3036
SCP_Astral_1000pg_6ms 4949 6632 +1683
SCP_Astral_10ng_12ms 16536 17510 +974
SCP_Astral_10ng_24ms 13982 14896 +914
SCP_Astral_10ng_3ms 16458 17681 +1223
SCP_Astral_10ng_6ms 17349 18272 +923
SCP_Astral_250pg_12ms 3814 5279 +1465
SCP_Astral_250pg_24ms 5169 5739 +570
SCP_Astral_250pg_3ms 736 2672 +1936
SCP_Astral_250pg_6ms 2066 4112 +2046
SCP_Astral_500pg_12ms 6219 7731 +1512
SCP_Astral_500pg_24ms 7342 7823 +481
SCP_Astral_500pg_3ms 2234 5239 +3005
SCP_Astral_500pg_6ms 4103 7112 +3009
SCP_Astral_MBR 19891 21058 +1167
Seer_Astral_45 242898
Seer_Astral_single 4739 4931 +192
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 249013 +1591
EWZ_2P_MBR_Exploris_Human 117340 115868 -1472
EWZ_2P_MBR_Exploris_YeastHuman 130702 132926 +2224
MacCoss_Eclipse_Normalization_noNorm 183540 191388 +7848
MacCoss_Eclipse_Normalization_yesNorm 183540 191388 +7848

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0006 +0.0006 +0.0006
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0002 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0011 -0.0006 -0.0010 -0.0001 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0008 +0.0005 -0.0013 -0.0003 -0.0001 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0013 +0.0003 +0.0006 +0.0013 +0.0013
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0007 -0.0003 +0.0006 +0.0007 +0.0008 +0.0008
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0003 +0.0015 +0.0010 +0.0009 +0.0017 +0.0017
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0008 +0.0003 +0.0012 +0.0017 +0.0018
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0009 -0.0015 -0.0015
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0004 +0.0005 +0.0001 +0.0015 -0.0001 -0.0001
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0011 +0.0011 +0.0018 +0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0001 +0.0055 +0.0034 +0.0032 +0.0047 +0.0047
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0010 +0.0040 +0.0058 +0.0040 +0.0049 +0.0056
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0006 +0.0008 +0.0017 +0.0042 +0.0032 +0.0032
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0004 +0.0018 +0.0013 +0.0020 +0.0020
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0013 +0.0007 -0.0022 +0.0001 -0.0000 -0.0000
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0011 +0.0013 +0.0015 +0.0007 +0.0006 +0.0006
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0001 +0.0008 -0.0000 +0.0022 +0.0012 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0023 +0.0062 +0.0063 +0.0020 +0.0075 +0.0075
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0003 -0.0001 +0.0009 +0.0021 +0.0028 +0.0028
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0040 +0.0109 +0.0040 +0.0040
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0023 +0.0074 +0.0049 +0.0072 +0.0067
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0005 +0.0017 +0.0005 +0.0023 +0.0021 +0.0021
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0025 +0.0037 +0.0049 +0.0037 +0.0036 +0.0036
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0019 +0.0032 +0.0042 +0.0054 +0.0054
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0008 +0.0039 +0.0041 +0.0023 +0.0023
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0028 -0.0001 -0.0008 -0.0014 -0.0006 -0.0006
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0003 +0.0025 +0.0025
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0014 +0.0012 +0.0013
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0022 +0.0007 -0.0008
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0029 -0.0019 -0.0018 -0.0034 -0.0036 -0.0018
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0029 -0.0017 -0.0004 -0.0000 -0.0004 +0.0014
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0033 +0.0033 +0.0020 +0.0015 +0.0011
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0002 +0.0044 +0.0041 +0.0051 +0.0036 +0.0059
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0031 +0.0028 +0.0017 -0.0011 -0.0003 -0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0034 +0.0002 +0.0011 +0.0022 +0.0020
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0015 -0.0012 +0.0015
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0003 +0.0027 -0.0001 +0.0026 +0.0006 +0.0015
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0017 +0.0032 +0.0025 +0.0025 +0.0023
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0009 +0.0061 +0.0050 +0.0061 +0.0062 +0.0074
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0024 +0.0083 +0.0083 +0.0096 +0.0096 +0.0111
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0024 -0.0006 +0.0026 +0.0019 +0.0021 +0.0023
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0012 +0.0042 +0.0027 +0.0041 +0.0048
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0021 +0.0011 +0.0002 -0.0005 +0.0024 +0.0015
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0000 +0.0037 +0.0073 +0.0066 +0.0061 +0.0060
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0022 +0.0033 -0.0002 +0.0032 +0.0025 +0.0027
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0041 +0.0094 +0.0117 +0.0075 +0.0104 +0.0102
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0012 +0.0030 +0.0030 +0.0014 +0.0001 +0.0031
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0009 +0.0018 -0.0009 +0.0076 -0.0009 -0.0009
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0023 +0.0122 +0.0090 +0.0108 +0.0111 +0.0111
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0016 +0.0019 +0.0023 -0.0031 +0.0004 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0012 +0.0032 +0.0013 +0.0063 +0.0074 +0.0072
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0101 +0.0143 +0.0030 +0.0081 +0.0102 +0.0103
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 -0.0009 +0.0036 +0.0036 -0.0001 +0.0047 +0.0034
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0017 +0.0042 +0.0013 +0.0008 +0.0033 +0.0039
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0011 +0.0085 +0.0084
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0002 +0.0010 +0.0010
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0000 +0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0004 -0.0003 -0.0007 -0.0002 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0001 +0.0008 -0.0003 +0.0002 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0005 +0.0005 +0.0008 +0.0009 +0.0009
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0002 +0.0006 +0.0010 +0.0012 +0.0010 +0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0001 +0.0008 +0.0007 +0.0007 +0.0010 +0.0010
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 -0.0006 +0.0002 +0.0004 +0.0009 +0.0009
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 -0.0004 -0.0006 -0.0006
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0009 +0.0013 +0.0004 +0.0015 +0.0009 +0.0009
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0006 +0.0009 +0.0024 +0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0005 +0.0050 +0.0033 +0.0036 +0.0042 +0.0042
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0018 +0.0038 +0.0047 +0.0043 +0.0044 +0.0052
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0003 +0.0001 +0.0009 +0.0030 +0.0027 +0.0027
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0000 +0.0017 +0.0010 +0.0016 +0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0010 +0.0004 -0.0013 +0.0002 -0.0002 -0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0002 +0.0017 +0.0018 +0.0014 +0.0013 +0.0013
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0002 +0.0003 -0.0004 +0.0010 +0.0007 +0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0017 +0.0047 +0.0044 +0.0019 +0.0048 +0.0048
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0004 +0.0012 +0.0013 +0.0018 +0.0018 +0.0018
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0028 +0.0087 +0.0028 +0.0028
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0032 +0.0069 +0.0053 +0.0062 +0.0062
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0002 +0.0021 +0.0006 +0.0022 +0.0015 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0019 +0.0035 +0.0036 +0.0037 +0.0035 +0.0035
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0026 +0.0008 +0.0030 +0.0042 +0.0042
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0014 +0.0039 +0.0033 +0.0024 +0.0024
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 -0.0005 +0.0012 +0.0010 +0.0003 +0.0008 +0.0008
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0003 +0.0025 +0.0025
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 -0.0002 +0.0010 +0.0011
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0012 +0.0005 -0.0006
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0013 -0.0012 -0.0011 -0.0016 -0.0015 -0.0008
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0013 -0.0005 +0.0001 +0.0008 +0.0005 +0.0011
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0004 +0.0032 +0.0030 +0.0025 +0.0018
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0010 +0.0047 +0.0032 +0.0035 +0.0023 +0.0035
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0024 +0.0014 +0.0011 -0.0010 -0.0008 -0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0017 +0.0006 +0.0010 +0.0020 +0.0017
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0008 -0.0004 +0.0012
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0006 +0.0021 -0.0012 +0.0011 +0.0010 +0.0014
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0016 +0.0021 +0.0007 +0.0016 +0.0023
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0009 +0.0039 +0.0046 +0.0048 +0.0034 +0.0050
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0006 +0.0050 +0.0039 +0.0047 +0.0037 +0.0071
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0023 +0.0001 +0.0012 +0.0017 +0.0017 +0.0010
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0017 +0.0030 +0.0014 +0.0025 +0.0027
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0013 +0.0019 +0.0000 +0.0001 +0.0012 +0.0017
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0003 +0.0024 +0.0049 +0.0041 +0.0036 +0.0043
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0017 +0.0021 +0.0001 +0.0021 +0.0012 +0.0016
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0028 +0.0067 +0.0069 +0.0047 +0.0058 +0.0073
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0002 +0.0011 +0.0030 +0.0001 -0.0002 +0.0026
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0029 +0.0090 +0.0111 +0.0076 +0.0029 +0.0029
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0009 +0.0109 +0.0077 +0.0064 +0.0056 +0.0056
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0010 +0.0029 +0.0025 -0.0003 +0.0017 +0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0010 +0.0030 +0.0010 +0.0054 +0.0055 +0.0078
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0048 +0.0081 -0.0018 +0.0020 +0.0045 +0.0046
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0010 +0.0030 +0.0032 +0.0001 +0.0038 +0.0028
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0003 +0.0020 +0.0014 +0.0019 +0.0025 +0.0037
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0019 +0.0093 +0.0088
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 20891 -3504 -3697

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 325 -446 -437

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0156 -0.0160 -0.0154

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 212 -632 +841

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -8 -198 -64

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 13 +4 +1 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1687 +0.0228 +0.0266 +0.0286 +0.0313 +0.0312
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1609 +0.0216 +0.0247 +0.0258 +0.0285 +0.0284
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1627 +0.0171 +0.0202 +0.0219 +0.0218
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1534 +0.0003 +0.0124 +0.0158 +0.0178 +0.0179
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1730 +0.0033 +0.0091 +0.0115 +0.0131 +0.0133
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1502 -0.0001 +0.0136 +0.0165 +0.0180 +0.0179
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1542 +0.0062 +0.0042 +0.0046 +0.0037 +0.0036
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5969 +0.0100 +0.0100
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2100 +0.0383 +0.0382

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0855 +0.0092 +0.0116 +0.0128 +0.0135 +0.0097
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0822 +0.0098 +0.0119 +0.0122 +0.0134 +0.0104
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0761 +0.0088 +0.0101 +0.0103 +0.0074
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0665 -0.0113 +0.0062 +0.0073 +0.0077 +0.0064
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0792 +0.0000 +0.0036 +0.0039 +0.0020 +0.0018
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0646 -0.0125 +0.0079 +0.0077 +0.0077 +0.0062
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1013 -0.0016 -0.0007 -0.0024 -0.0015 -0.0020
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5787 -0.0094 -0.0093
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1355 +0.0122 +0.0109

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0107 -0.0020 +0.0070 +0.0012 +0.0000 -0.0669
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0040 -0.0076 +0.0055 -0.0002 -0.0001 -0.0367
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0006 +0.0007 -0.0023 -0.0001 -0.0000 -0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0626 +0.0012 -0.0008 +0.0020 -0.0002 -0.0640
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0589 -0.0054 -0.0006 -0.0003 +0.0001 -0.0134
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0520 -0.0080 +0.0050 -0.0016 -0.0001 +0.0231
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1274 -0.0059 -0.0059 +0.0211 -0.0012 -0.1078
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0820 +0.0062 +0.0047 -0.0191 -0.0001 +0.0216
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1966 +0.0183 -0.0240 +0.0287 +0.0020 -0.0839
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1038 +0.0048 -0.0054 -0.0067 +0.0002 +0.0153
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0468 +0.0009 +0.0001 -0.0089 -0.0000 +0.0012
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2072 +0.0051 -0.0017 +0.0004 +0.0004 +0.0033
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1333 -0.0032 -0.0062 -0.0160 +0.0006 +0.1102
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0799 +0.0043 -0.0045 -0.0054 -0.0001 -0.0220
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0415 +0.0169 -0.0238 +0.0355 +0 -0.0550
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0160 +0.0009 +0.0076 -0.0005 +0.0006 -0.0580
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0016 -0.0089 +0.0045 +0.0004 +0.0011 -0.0406
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0092 +0.0054 -0.0044 +0.0010 +0.0033 +0.0023
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0603 +0.0013 +0.0005 -0.0055 +0.0004 -0.0608
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0592 -0.0060 -0.0005 -0.0005 -0.0005 -0.0105
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0508 -0.0084 +0.0078 -0.0007 +0.0020 +0.0178
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1591 -0.0077 -0.0028 +0.0144 -0.0004 -0.0616
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0789 +0.0048 +0.0016 -0.0170 -0.0057 +0.0289
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2386 +0.0504 -0.0481 +0.0073 +0.0089 -0.0357
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1043 +0.0031 -0.0032 -0.0081 +0.0006 +0.0278
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0440 +0.0011 -0.0008 -0.0084 -0.0000 +0.0020
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2183 +0.0036 -0.0008 +0.0016 +0.0018 +0.0133
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1157 +0.0005 -0.0096 -0.0297 +0.0070 +0.1041
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0804 +0.0056 -0.0034 -0.0033 +0.0038 -0.0318
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0543 +0.0405 -0.0089 +0.0322 +0.0276 -0.0906
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1460 +0.0343 +0.0202 -0.0086 +0.0005 -0.1623
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1261 +0.0169 -0.0058 +0.0004 +0.0004 -0.0842
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1299 +0.0117 -0.0078 +0.0011 -0.0001 -0.1308
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1479 +0.0441 -0.0007 -0.0136 +0.0007 -0.1507
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1328 +0.0164 -0.0031 -0.0002 +0.0007 -0.0872
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1355 +0.0170 -0.0063 +0.0017 +0.0006 -0.1331
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2169 +0.0445 +0.0761 -0.1281 +0.0017 -0.3556
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0449 -0.0103 +0.0134 -0.0147 -0.0018 -0.1046
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3283 -0.0030 +0.1483 +0.0078 -0.0120 -0.6171
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1854 +0.0037 +0.0045 +0.0051 +0.0002 -0.1653
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0450 +0.0676 -0.0087 -0.0168 +0.0006 -0.1073
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1856 +0.0316 +0.0062 -0.0049 +0.0001 -0.1497
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2144 -0.0093 +0.0378 -0.0706 +0.0033 -0.3657
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0604 +0.0977 -0.0155 +0.0159 +0.0001 -0.1875
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.6723 +0.0737 +0.1982 -0.0827 -0.0008 -0.6021
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0665 +0.0149 -0.0182 -0.0054 +0.1015 -0.1557
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0401 +0.0035 +0.0005 +0.0043 +0.0189 -0.0603
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0563 -0.0157 -0.0104 +0.0083 +0.0352 -0.0911
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0513 -0.0042 +0.0002 -0.0084 +0.0711 -0.1394
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0370 +0.0032 -0.0030 +0.0035 +0.0313 -0.0659
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0495 +0.0000 +0.0073 -0.0081 +0.0305 -0.1064
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0499 +0.0146 +0.0452 -0.0355 +0.0761 -0.2538
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0175 -0.0057 -0.0062 -0.0031 +0.0154 -0.0464
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0615 -0.1294 +0.1626 +0.0090 +0.0813 -0.5203
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0322 -0.0046 +0.0074 +0.0016 +0.0039 -0.0408
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0130 +0.0109 -0.0066 +0.0090 -0.0065 -0.0239
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0369 -0.0053 +0.0093 +0.0025 +0.0083 -0.0538
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0768 -0.0166 +0.0170 -0.0166 +0.0315 -0.1722
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0219 +0.0068 -0.0006 -0.0039 +0.0560 -0.1079
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.2388 -0.0891 -0.0032 -0.0082 +0.0618 -0.2534
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 16.4700 -7.6000 -0.8500 -3.4000 -0.6600 -2.5600 -31.5746% -4.9076% -17.1112% -3.8529% -13.4524%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 8.3400 -4.4100 -0.7300 -0.0200 -0.9500 +0.2100 -34.5882% -8.0485% -0.2392% -10.2260% +2.5830%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 8.3800 -3.9300 -0.5800 -1.2800 -2.4300 -1.4100 -31.9253% -6.4732% -13.2505% -22.4792% -14.4025%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.6700 +0.4400 +0.2600 -0.2700 +0.3900 +10.4019% +5.8957% -5.4656% +9.1121%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.4300 -0.9500 +0.0500 -0.3200 -0.1100 -0.1300 -17.6580% +1.1416% -6.7368% -2.4229% -2.8509%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.6700 -0.7600 +0.5300 +0.2300 +0.0100 +0.4300 -13.9963% +12.8019% +5.1802% +0.2146% +10.1415%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.4800 -1.0700 +0.0600 -0.0500 +0.0200 -0.0600 -19.2793% +1.3575% -1.1038% +0.4484% -1.3216%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 14.0400 -13.6200 -5.7200 -4.2800 -5.2400 -3.8600 -49.2408% -28.9474% -23.3624% -27.1784% -21.5642%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.3200 -1.4700 -0.2700 -0.3300 +0.2300 -0.0400 -25.3886% -5.8824% -7.0968% +5.6235% -0.9174%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 4.9400 -1.3200 +0.5400 -0.9400 -0.0700 -21.0863% +12.2727% -15.9864% -1.3972%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.5500 +0.0300 +0.8200 -0.2500 +0.9100 +0.7200 +0.6637% +21.9839% -5.2083% +25.0000% +18.7990%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 3.9600 -1.7800 +0.4500 +0.0400 +0.5200 +0.2400 -31.0105% +12.8205% +1.0204% +15.1163% +6.4516%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 5.4300 -1.6400 -0.1000 -0.0800 -0.3100 -0.0400 -23.1966% -1.8083% -1.4519% -5.4007% -0.7313%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.3400 -1.2500 +0.6100 +0.2000 +0.8000 +0.4500 -16.4690% +10.6457% +3.2573% +14.4404% +7.6401%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 4.7500 -1.7000 +0.0800 +0.4500 +0.3400 +0.3300 -26.3566% +1.7131% +10.4651% +7.7098% +7.4661%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.3800 -2 +0.4500 +0.7500 -0.2400 +0.4200 -27.1003% +9.1278% +16.1987% -4.2705% +8.4677%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.1400 -0.6000 +0.4800 +0.7500 +0.5500 -12.6582% +13.1148% +22.1239% +15.3203%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.2000 -1.0600 +0.3600 +0.4400 +0.1400 -20.1521% +9.3750% +11.7021% +3.4483%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 3.9400 -0.7100 +0.5100 +0.2300 +0.4900 +0.3900 -15.2688% +14.8688% +6.1995% +14.2029% +10.9859%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.1600 -0.0100 +0.8700 +0.4700 +0.8900 +0.6400 -0.2398% +26.4438% +12.7371% +27.2171% +18.1818%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.3400 -0.9400 +0.8100 +0.7400 +0.8500 +0.6400 -17.8030% +22.9462% +20.5556% +24.3553% +17.2973%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.4000 -1.1100 +0.5800 +0.2500 -0.4100 +0.3700 -20.1452% +15.1832% +6.0241% -8.5239% +9.1811%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.2100 -0.5200 +0.7500 +0.6400 +0.4400 -10.9937% +21.6763% +17.9272% +11.6711%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.8200 +0.1700 +1.2000 +1.0900 +1.0400 +1.3200 +3.6559% +33.1492% +29.2225% +27.5132% +37.7143%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 6.4700 -2.5700 -0.0800 +0.3700 -0.7400 -28.4292% -1.2214% +6.0656% -10.2635%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.3400 +0.8700 +1.2000 -0.2400 +0.1200 +19.4631% +28.9855% -4.3011% +2.2989%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 21.8900 -4.2900 -2.3900 -16.3866% -9.8435%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.5700 -0.3400 +0.1500 -2.6336% +1.2077%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 12.3300 +0.2700 -2.0800 +2.2388% -14.4344%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 34.1500 +6.6400 +5.8700 +24.1367% +20.7567%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 34.6100 +6.9400 +6.1100 +25.0813% +21.4386%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png