Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1338402 +241908 +31397 +26447 +44861 +44861 +22.0620% +2.4022% +2.0158% +3.4681% +3.4681%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 650688 +64366 +34926 +39978 +50807 +50807 +10.9779% +5.6720% +6.5462% +8.4695% +8.4695%
MTAC_3P_Standard 596590 623022 617574 607435 607435 659832 +63242 +36810 +42258 +52397 +52397 +10.6006% +5.9083% +6.8426% +8.6259% +8.6259%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 151009 +13461 +14170 +15449 +15449 +9.7864% +10.3552% +11.3964% +11.3964%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 171124 +15483 +14573 +14615 +16089 +16280 +9.9479% +9.3088% +9.3381% +10.3777% +10.5138%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 153451 +14942 +14066 +14159 +15566 +15664 +10.7877% +10.0915% +10.1650% +11.2891% +11.3683%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 171452 +12490 +12720 +12292 +13530 +13530 +7.8572% +8.0135% +7.7230% +8.5675% +8.5675%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1324894 +302158 +170225 +201021 +140810 +140810 +29.5441% +14.7423% +17.8865% +11.8919% +11.8919%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 53717 +12835 +12017 +11292 +11617 +11617 +31.3952% +28.8177% +26.6164% +27.5938% +27.5938%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 51322 +10253 +8920 +9299 +10170 +10170 +24.9653% +21.0367% +22.1284% +24.7133% +24.7133%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 41479 +32739 +18364 +18464 +18566 +18566 +374.5881% +79.4462% +80.2259% +81.0282% +81.0282%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 28791 +11856 +11238 +10382 +10443 +10443 +70.0089% +64.0232% +56.3963% +56.9163% +56.9163%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 117294 +17386 +14403 +18311 +18646 +18646 +17.4020% +13.9983% +18.4991% +18.9015% +18.9015%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 85173 +14075 +12445 +13728 +14047 +14047 +19.7966% +17.1117% +19.2148% +19.7495% +19.7495%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 122187 +16483 +15690 +16565 +17753 +17675 +15.5935% +14.7328% +15.6833% +16.9993% +16.9119%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 129886 +14729 +12570 +15564 +16805 +16636 +12.7904% +10.7147% +13.6142% +14.8610% +14.6896%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 18338 +8144 +7532 +7100 +7105 +7105 +79.8901% +69.7020% +63.1785% +63.2511% +63.2511%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 19999 +5192 +4566 +3958 +4300 +4300 +35.0645% +29.5860% +24.6743% +27.3903% +27.3903%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8605 +7344 +6573 +6155 +6219 +6219 +582.3949% +323.4744% +251.2245% +260.6454% +260.6454%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14679 +13243 +9896 +8989 +8948 +8948 +922.2145% +206.8994% +157.9789% +156.1333% +156.1333%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 31106 +9396 +9211 +8526 +8643 +8643 +43.2796% +42.0690% +37.7591% +38.4766% +38.4766%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 31775 +5915 +5632 +5515 +6150 +6150 +22.8732% +21.5431% +21.0015% +24% +24%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 18789 +15305 +11891 +11955 +11955 +439.2939% +172.3833% +174.9342% +174.9342%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 26780 +16081 +15306 +13898 +13891 +13891 +150.3038% +133.3972% +107.8870% +107.7741% +107.7741%
SCP_Astral_MBR 92167 93585 91884 90864 90838 110680 +18513 +17095 +18796 +19816 +19842 +20.0864% +18.2668% +20.4562% +21.8084% +21.8433%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 58402 +1703 +2609 +2511 +2511 +3.0036% +4.6762% +4.4927% +4.4927%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1912854 +136726 +137508 +7.6980% +7.7454%
EWZ_2P_MBR_Exploris_Human 836809 836809 898876 +62067 +62067 +7.4171% +7.4171%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 999097 +84173 +85148 +9.2000% +9.3165%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2286053 +208019 +208017 +10.0104% +10.0103%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2286053 +208019 +208017 +10.0104% +10.0103%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 149797 +38293 +16178 +18438 +17766 +17766 +34.3423% +12.1076% +14.0363% +13.4559% +13.4559%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 125407 +17140 +8055 +10748 +10591 +10591 +15.8312% +6.8640% +9.3739% +9.2243% +9.2243%
MTAC_3P_Standard 110265 118693 115800 116148 116148 127113 +16848 +8420 +11313 +10965 +10965 +15.2796% +7.0939% +9.7694% +9.4405% +9.4405%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56730 +7872 +7698 +7735 +7735 +16.1120% +15.7000% +15.7873% +15.7873%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63290 +9321 +8215 +7450 +7406 +7469 +17.2710% +14.9160% +13.3417% +13.2525% +13.3803%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 57734 +9113 +8069 +7445 +7274 +7319 +18.7429% +16.2469% +14.8044% +14.4154% +14.5175%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 63172 +8112 +7253 +6465 +6345 +6345 +14.7330% +12.9705% +11.4007% +11.1655% +11.1655%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 72371 +21099 +13587 +17324 +13778 +13806 +41.1511% +23.1134% +31.4713% +23.5148% +23.5738%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 20357 +5917 +5399 +5108 +4650 +4650 +40.9765% +36.0944% +33.4973% +29.6046% +29.6046%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 19347 +4864 +4282 +4431 +4277 +4275 +33.5842% +28.4235% +29.7064% +28.3809% +28.3639%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 16721 +7981 +7345 +7332 +7357 +7336 +91.3158% +78.3383% +78.0914% +78.5669% +78.1673%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 16386 +7488 +7127 +6602 +6576 +6576 +84.1537% +76.9738% +67.4775% +67.0336% +67.0336%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 42160 +7295 +5863 +7818 +7735 +7735 +20.9236% +16.1529% +22.7651% +22.4691% +22.4691%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 31001 +6352 +5535 +5882 +5778 +5778 +25.7698% +21.7349% +23.4165% +22.9077% +22.9077%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 44765 +8077 +7089 +7116 +7344 +7306 +22.0154% +18.8157% +18.9009% +19.6253% +19.5040%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 46541 +6385 +4996 +6498 +6648 +6595 +15.9005% +12.0255% +16.2276% +16.6646% +16.5098%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7358 +3692 +3409 +3149 +3112 +3112 +100.7092% +86.3257% +74.8159% +73.2925% +73.2925%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7807 +2508 +2196 +1952 +1741 +1740 +47.3297% +39.1374% +33.3390% +28.7010% +28.6797%
SCP_Astral_250pg_3ms 675 721 908 879 879 4029 +3354 +3308 +3121 +3150 +3150 +496.8889% +458.8072% +343.7225% +358.3618% +358.3618%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6206 +4770 +4468 +4061 +4043 +4041 +332.1727% +257.0771% +189.3240% +186.9163% +186.6513%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12239 +4445 +4267 +3987 +3833 +3831 +57.0310% +53.5248% +48.3156% +45.5984% +45.5637%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12062 +2904 +2720 +2691 +2648 +2647 +31.7100% +29.1158% +28.7163% +28.1283% +28.1147%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8150 +6304 +5550 +5564 +5561 +341.4951% +213.4615% +215.1585% +214.7934%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 10573 +6699 +6418 +5799 +5768 +5769 +172.9220% +154.4645% +121.4705% +120.0416% +120.0874%
SCP_Astral_MBR 24110 24991 24570 24544 24527 30171 +6061 +5180 +5601 +5627 +5644 +25.1389% +20.7275% +22.7961% +22.9262% +23.0114%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 58402 +1703 +2609 +2511 +2511 +3.0036% +4.6762% +4.4927% +4.4927%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 61697 +6426 +6550 +11.6264% +11.8773%
EWZ_2P_MBR_Exploris_Human 48465 48473 53867 +5402 +5394 +11.1462% +11.1278%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 57611 +6365 +6434 +12.4205% +12.5721%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 78714 +5436 +5437 +7.4183% +7.4198%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 78714 +5436 +5437 +7.4183% +7.4198%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91905 +3985 -983 -2077 -1536 -2381 +4.5325% -1.0583% -2.2100% -1.6438% -2.5253%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67410 +3637 +3436 +3799 +4395 +1575 +5.7030% +5.3709% +5.9722% +6.9745% +2.3923%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68118 +3801 +3654 +3899 +4733 +2151 +5.9098% +5.6683% +6.0714% +7.4671% +3.2607%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12884 +817 +914 +944 +645 +6.7705% +7.6358% +7.9062% +5.2700%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13183 +751 +712 +821 +855 +523 +6.0409% +5.7092% +6.6413% +6.9354% +4.1311%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12716 +708 +669 +756 +748 +536 +5.8961% +5.5532% +6.3211% +6.2500% +4.4007%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13298 +737 +833 +821 +888 +524 +5.8674% +6.6827% +6.5801% +7.1555% +4.1021%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 157566 +11342 +4032 +3576 +1739 +280 +7.7566% +2.6261% +2.3222% +1.1160% +0.1780%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11506 +2343 +1978 +1921 +2172 +1484 +25.5702% +20.7599% +20.0417% +23.2698% +14.8074%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11419 +2121 +1658 +2007 +1866 +1430 +22.8114% +16.9860% +21.3238% +19.5331% +14.3157%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9351 +6901 +3267 +3104 +3235 +3002 +281.6735% +53.6982% +49.6879% +52.8940% +47.2830%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6468 +1765 +1880 +1510 +1545 +1519 +37.5292% +40.9765% +30.4558% +31.3833% +30.6931%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17525 +1335 +1245 +1500 +1470 +989 +8.2458% +7.6474% +9.3604% +9.1560% +5.9809%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15035 +1436 +1194 +1347 +1364 +1051 +10.5596% +8.6265% +9.8407% +9.9773% +7.5157%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17720 +1468 +1444 +1603 +1795 +1262 +9.0327% +8.8720% +9.9460% +11.2716% +7.6680%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18349 +1332 +1171 +1436 +1604 +1000 +7.8275% +6.8169% +8.4905% +9.5790% +5.7640%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5359 +1712 +1446 +1495 +1820 +1545 +46.9427% +36.9537% +38.6905% +51.4270% +40.5087%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5635 +1335 +1032 +838 +658 +466 +31.0465% +22.4202% +17.4693% +13.2208% +9.0153%
SCP_Astral_250pg_3ms 576 22 936 741 736 2521 +1945 +2499 +1585 +1780 +1785 +337.6736% +11359.0909% +169.3376% +240.2159% +242.5272%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4440 +3803 +2360 +2411 +2394 +2372 +597.0173% +113.4615% +118.8270% +117.0088% +114.7002%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7638 +1393 +1292 +1622 +1511 +1419 +22.3058% +20.3593% +26.9614% +24.6613% +22.8172%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7910 +1188 +1181 +898 +887 +568 +17.6733% +17.5509% +12.8066% +12.6299% +7.7363%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5174 +4192 +2809 +2997 +2938 +426.8839% +118.7738% +137.6665% +131.3953%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7034 +3326 +3027 +2989 +3116 +2931 +89.6980% +75.5428% +73.8937% +79.5304% +71.4355%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21292 +1127 +1163 +1218 +1499 +1394 +5.5889% +5.7777% +6.0676% +7.5734% +7.0057%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4897 +212 +197 +265 +158 +4.5251% +4.1915% +5.7211% +3.3340%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 249195 +3936 +1773 +1.6048% +0.7166%
EWZ_2P_MBR_Exploris_Human 115447 117345 116002 +555 -1343 +0.4807% -1.1445%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 133211 +4243 +2505 +3.2900% +1.9165%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 191565 +13391 +8022 +7.5157% +4.3706%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 191565 +13391 +8022 +7.5157% +4.3706%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8394 +549 +219 +239 +191 +145 +6.9981% +2.6789% +2.9307% +2.3284% +1.7578%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12194 +833 +700 +843 +856 +396 +7.3321% +6.0901% +7.4267% +7.5498% +3.3565%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12334 +861 +774 +857 +938 +502 +7.5046% +6.6955% +7.4671% +8.2310% +4.2427%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4441 +313 +349 +341 +258 +7.5824% +8.5288% +8.3171% +6.1678%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4526 +311 +278 +308 +312 +189 +7.3784% +6.5443% +7.3020% +7.4039% +4.3579%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4365 +290 +231 +275 +268 +180 +7.1166% +5.5878% +6.7237% +6.5414% +4.3011%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4540 +291 +303 +296 +309 +186 +6.8487% +7.1513% +6.9746% +7.3032% +4.2719%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7870 +615 +288 +530 +391 +333 +8.4769% +3.7985% +7.2207% +5.2280% +4.4182%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4153 +908 +764 +742 +835 +592 +27.9815% +22.5435% +21.7532% +25.1658% +16.6245%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4103 +849 +670 +812 +669 +611 +26.0910% +19.5165% +24.6734% +19.4817% +17.4971%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3490 +1040 +1094 +1040 +1093 +1056 +42.4490% +45.6594% +42.4490% +45.5987% +43.3854%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3473 +965 +1037 +839 +831 +890 +38.4769% +42.5698% +31.8527% +31.4534% +34.4561%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6073 +494 +417 +569 +527 +419 +8.8546% +7.3727% +10.3379% +9.5023% +7.4107%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5260 +539 +422 +477 +449 +416 +11.4171% +8.7226% +9.9728% +9.3328% +8.5879%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6201 +590 +546 +605 +648 +488 +10.5151% +9.6552% +10.8113% +11.6694% +8.5419%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6367 +521 +418 +524 +562 +402 +8.9121% +7.0264% +8.9680% +9.6813% +6.7393%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2022 +730 +598 +616 +734 +663 +56.5015% +41.9944% +43.8122% +56.9876% +48.7859%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2066 +498 +406 +308 +193 +196 +31.7602% +24.4578% +17.5199% +10.3043% +10.4813%
SCP_Astral_250pg_3ms 307 8 350 283 281 1043 +736 +1035 +693 +760 +762 +239.7394% +12937.5000% +198% +268.5512% +271.1744%
SCP_Astral_250pg_6ms 637 756 751 766 767 1686 +1049 +930 +935 +920 +919 +164.6782% +123.0159% +124.5007% +120.1044% +119.8175%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2790 +583 +515 +621 +560 +573 +26.4159% +22.6374% +28.6307% +25.1121% +25.8457%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2849 +446 +461 +372 +310 +251 +18.5601% +19.3049% +15.0182% +12.2095% +9.6613%
SCP_Astral_500pg_3ms 525 902 828 835 2018 +1493 +1116 +1190 +1183 +284.3810% +123.7251% +143.7198% +141.6766%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2600 +1282 +1153 +1114 +1165 +1132 +97.2686% +79.6821% +74.9664% +81.1847% +77.1117%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5101 +393 +381 +389 +386 +385 +8.3475% +8.0720% +8.2555% +8.1866% +8.1637%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4897 +212 +197 +265 +158 +4.5251% +4.1915% +5.7211% +3.3340%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7195 +154 +89 +2.1872% +1.2525%
EWZ_2P_MBR_Exploris_Human 6167 6284 6214 +47 -70 +0.7621% -1.1139%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7179 +292 +216 +4.2399% +3.1021%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6278 +474 +323 +8.1668% +5.4240%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6278 +474 +323 +8.1668% +5.4240%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91894 -2385
MTAC_3P_Alternating 65832 67403 +1571
MTAC_3P_Standard 65967 68113 +2146
MTAC_Yeast_Alternating_3min 12239 12879 +640
MTAC_Yeast_Alternating_5min 12660 13175 +515
MTAC_Yeast_Standard_3min 12180 12709 +529
MTAC_Yeast_Standard_5min 12772 13294 +522
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 157558 +273
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11504 +1482
SCP_Astral_1000pg_24ms 9989 11419 +1430
SCP_Astral_1000pg_3ms 6349 9349 +3000
SCP_Astral_1000pg_6ms 4949 6466 +1517
SCP_Astral_10ng_12ms 16536 17524 +988
SCP_Astral_10ng_24ms 13982 15035 +1053
SCP_Astral_10ng_3ms 16458 17719 +1261
SCP_Astral_10ng_6ms 17349 18348 +999
SCP_Astral_250pg_12ms 3814 5359 +1545
SCP_Astral_250pg_24ms 5169 5635 +466
SCP_Astral_250pg_3ms 736 2520 +1784
SCP_Astral_250pg_6ms 2066 4440 +2374
SCP_Astral_500pg_12ms 6219 7638 +1419
SCP_Astral_500pg_24ms 7342 7907 +565
SCP_Astral_500pg_3ms 2234 5172 +2938
SCP_Astral_500pg_6ms 4103 7034 +2931
SCP_Astral_MBR 19891 21292 +1401
Seer_Astral_45 242898
Seer_Astral_single 4739 4897 +158
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 249188 +1766
EWZ_2P_MBR_Exploris_Human 117340 115998 -1342
EWZ_2P_MBR_Exploris_YeastHuman 130702 133206 +2504
MacCoss_Eclipse_Normalization_noNorm 183540 191565 +8025
MacCoss_Eclipse_Normalization_yesNorm 183540 191565 +8025

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0011 +0.0001 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0005 +0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0004 +0.0001 -0.0003 +0.0006 +0.0004 +0.0004
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0010 +0.0004 -0.0014 -0.0004 -0.0002 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0012 +0.0003 +0.0007 +0.0014 +0.0014
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0003 +0.0000 +0.0009 +0.0011 +0.0011 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0006 +0.0013 +0.0008 +0.0006 +0.0014 +0.0014
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0002 +0.0009 +0.0018 +0.0022 +0.0024
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0004 -0.0010 -0.0010
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 -0.0001 +0.0001 -0.0003 +0.0010 -0.0005 -0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0016 +0.0007 +0.0014 +0.0004
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0022 +0.0076 +0.0055 +0.0054 +0.0069 +0.0069
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0009 +0.0039 +0.0057 +0.0039 +0.0048 +0.0055
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0014 +0.0017 +0.0025 +0.0050 +0.0040 +0.0040
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0003 +0.0019 +0.0014 +0.0021 +0.0021
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0007 +0.0013 -0.0016 +0.0008 +0.0006 +0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0004 +0.0029 +0.0031 +0.0022 +0.0022 +0.0022
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0001 +0.0006 -0.0002 +0.0020 +0.0010 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0027 +0.0066 +0.0068 +0.0025 +0.0080 +0.0080
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0021 -0.0018 -0.0009 +0.0003 +0.0011 +0.0011
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0022 +0.0090 +0.0022 +0.0022
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0018 +0.0069 +0.0045 +0.0068 +0.0062
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0006 +0.0016 +0.0004 +0.0021 +0.0020 +0.0020
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 -0.0003 +0.0010 +0.0021 +0.0009 +0.0008 +0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0036 +0.0049 +0.0059 +0.0071 +0.0071
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0043 +0.0074 +0.0075 +0.0057 +0.0057
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0003 +0.0023 +0.0016 +0.0011 +0.0019 +0.0019
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0008 +0.0030 +0.0030
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0013 +0.0013 +0.0014
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0020 +0.0010 -0.0006
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0034 -0.0024 -0.0023 -0.0040 -0.0041 -0.0023
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0025 -0.0012 -0.0000 +0.0004 +0.0001 +0.0018
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0033 +0.0033 +0.0020 +0.0015 +0.0011
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0036 +0.0077 +0.0075 +0.0085 +0.0070 +0.0093
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0019 +0.0039 +0.0029 +0.0001 +0.0009 +0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0009 +0.0045 +0.0054 +0.0065 +0.0063
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0033 -0.0031 -0.0003
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0005 +0.0024 -0.0004 +0.0023 +0.0004 +0.0012
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0031 +0.0018 +0.0011 +0.0012 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0029 +0.0041 +0.0029 +0.0041 +0.0042 +0.0054
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0006 +0.0053 +0.0053 +0.0066 +0.0066 +0.0081
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0013 +0.0004 +0.0036 +0.0030 +0.0032 +0.0033
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0023 +0.0031 +0.0017 +0.0031 +0.0038
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0038 -0.0005 -0.0015 -0.0022 +0.0007 -0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0002 +0.0035 +0.0071 +0.0065 +0.0059 +0.0059
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0025 +0.0029 -0.0005 +0.0029 +0.0021 +0.0024
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0012 +0.0066 +0.0089 +0.0047 +0.0076 +0.0074
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0000 +0.0042 +0.0042 +0.0026 +0.0013 +0.0042
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0014 +0.0042 +0.0014 +0.0100 +0.0014 +0.0014
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0092 +0.0190 +0.0158 +0.0176 +0.0180 +0.0180
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0016 +0.0019 +0.0023 -0.0031 +0.0004 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0008 +0.0028 +0.0009 +0.0060 +0.0070 +0.0069
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0052 +0.0094 -0.0019 +0.0032 +0.0053 +0.0054
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0039 +0.0083 +0.0084 +0.0046 +0.0094 +0.0081
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0030 +0.0029 -0.0001 -0.0005 +0.0020 +0.0026
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0029 +0.0103 +0.0102
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0004 +0.0008 +0.0008
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0002 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0001 +0.0003 -0.0001 +0.0003 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0001 +0.0008 -0.0003 +0.0003 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0006 +0.0004 +0.0007 +0.0008 +0.0008
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0004 +0.0008 +0.0011 +0.0013 +0.0012 +0.0012
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0000 +0.0008 +0.0007 +0.0008 +0.0011 +0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0002 +0.0011 +0.0013 +0.0017 +0.0017
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0002 -0.0000 -0.0000
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0006 +0.0010 +0.0001 +0.0012 +0.0006 +0.0006
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0009 +0.0006 +0.0021 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0014 +0.0060 +0.0042 +0.0045 +0.0051 +0.0051
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0020 +0.0040 +0.0049 +0.0046 +0.0046 +0.0054
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0010 +0.0008 +0.0016 +0.0038 +0.0034 +0.0034
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0000 +0.0016 +0.0009 +0.0015 +0.0015
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0007 +0.0007 -0.0010 +0.0005 +0.0001 +0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0005 +0.0024 +0.0025 +0.0021 +0.0019 +0.0019
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0002 +0.0003 -0.0004 +0.0010 +0.0006 +0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0015 +0.0045 +0.0042 +0.0018 +0.0046 +0.0046
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0005 +0.0003 +0.0004 +0.0009 +0.0009 +0.0009
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0016 +0.0076 +0.0016 +0.0016
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0025 +0.0062 +0.0046 +0.0055 +0.0055
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0006 +0.0025 +0.0010 +0.0026 +0.0019 +0.0019
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0001 +0.0017 +0.0019 +0.0019 +0.0018 +0.0018
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0038 +0.0019 +0.0042 +0.0054 +0.0054
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0040 +0.0066 +0.0059 +0.0050 +0.0050
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0009 +0.0026 +0.0024 +0.0017 +0.0022 +0.0022
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0008 +0.0030 +0.0030
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0007 +0.0019 +0.0020
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0008 +0.0008 -0.0002
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0018 -0.0017 -0.0015 -0.0021 -0.0020 -0.0012
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0008 -0.0000 +0.0005 +0.0012 +0.0010 +0.0015
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0012 +0.0024 +0.0022 +0.0017 +0.0010
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0030 +0.0067 +0.0051 +0.0054 +0.0043 +0.0055
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0000 +0.0038 +0.0035 +0.0014 +0.0016 +0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0001 +0.0022 +0.0026 +0.0036 +0.0033
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0015 -0.0010 +0.0006
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0000 +0.0026 -0.0007 +0.0017 +0.0016 +0.0019
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0020 +0.0017 +0.0003 +0.0012 +0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0009 +0.0039 +0.0046 +0.0048 +0.0034 +0.0050
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0000 +0.0044 +0.0033 +0.0041 +0.0031 +0.0064
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0014 +0.0010 +0.0021 +0.0026 +0.0026 +0.0019
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0019 +0.0028 +0.0012 +0.0023 +0.0025
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0026 +0.0006 -0.0012 -0.0011 -0.0000 +0.0005
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0004 +0.0018 +0.0042 +0.0034 +0.0029 +0.0036
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0021 +0.0017 -0.0003 +0.0017 +0.0008 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0006 +0.0045 +0.0048 +0.0026 +0.0037 +0.0051
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0025 +0.0039 +0.0057 +0.0029 +0.0026 +0.0054
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0032 +0.0092 +0.0113 +0.0078 +0.0032 +0.0032
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0064 +0.0164 +0.0132 +0.0119 +0.0111 +0.0111
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0006 +0.0034 +0.0029 +0.0001 +0.0022 +0.0016
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0006 +0.0013 -0.0007 +0.0037 +0.0039 +0.0061
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0056 +0.0088 -0.0011 +0.0028 +0.0053 +0.0053
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0029 +0.0049 +0.0051 +0.0020 +0.0057 +0.0047
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0014 +0.0009 +0.0003 +0.0008 +0.0014 +0.0026
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0029 +0.0103 +0.0097
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 14881 -9514 -9707

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 215 -556 -547

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0144 -0.0172 -0.0165

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 -18 -862 +611

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -95 -285 -151

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 0 +0 +1 +0 +0 -2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1677 +0.0218 +0.0256 +0.0277 +0.0303 +0.0302
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1618 +0.0225 +0.0256 +0.0267 +0.0294 +0.0293
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1614 +0.0159 +0.0190 +0.0206 +0.0205
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1544 +0.0013 +0.0135 +0.0168 +0.0188 +0.0189
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1737 +0.0039 +0.0098 +0.0122 +0.0138 +0.0139
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1487 -0.0016 +0.0121 +0.0150 +0.0165 +0.0164
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1542 +0.0062 +0.0042 +0.0046 +0.0037 +0.0036
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5973 +0.0104 +0.0104
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2109 +0.0392 +0.0391

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0852 +0.0089 +0.0113 +0.0125 +0.0132 +0.0095
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0817 +0.0093 +0.0114 +0.0117 +0.0129 +0.0099
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0738 +0.0065 +0.0077 +0.0079 +0.0050
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0651 -0.0127 +0.0048 +0.0058 +0.0063 +0.0049
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0778 -0.0014 +0.0022 +0.0025 +0.0006 +0.0003
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0643 -0.0127 +0.0076 +0.0074 +0.0075 +0.0060
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1013 -0.0016 -0.0007 -0.0024 -0.0014 -0.0020
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5788 -0.0094 -0.0092
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1350 +0.0117 +0.0103

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0079 -0.0020 +0.0070 +0.0012 +0.0000 -0.0698
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0042 -0.0076 +0.0055 -0.0002 -0.0001 -0.0366
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0004 +0.0007 -0.0023 -0.0001 -0.0000 -0.0005
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0601 +0.0012 -0.0008 +0.0020 -0.0002 -0.0666
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0609 -0.0054 -0.0006 -0.0003 +0.0001 -0.0115
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0537 -0.0080 +0.0050 -0.0016 -0.0001 +0.0248
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1278 -0.0059 -0.0059 +0.0211 -0.0012 -0.1074
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0817 +0.0062 +0.0047 -0.0191 -0.0001 +0.0213
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1949 +0.0183 -0.0240 +0.0287 +0.0020 -0.0856
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1043 +0.0048 -0.0054 -0.0067 +0.0002 +0.0158
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0466 +0.0009 +0.0001 -0.0089 -0.0000 +0.0010
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2070 +0.0051 -0.0017 +0.0004 +0.0004 +0.0030
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1339 -0.0032 -0.0062 -0.0160 +0.0006 +0.1108
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0798 +0.0043 -0.0045 -0.0054 -0.0001 -0.0221
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0354 +0.0169 -0.0238 +0.0355 +0 -0.0610
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0179 +0.0009 +0.0076 -0.0005 +0.0006 -0.0560
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0025 -0.0089 +0.0045 +0.0004 +0.0011 -0.0397
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0079 +0.0054 -0.0044 +0.0010 +0.0033 +0.0010
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0575 +0.0013 +0.0005 -0.0055 +0.0004 -0.0636
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0617 -0.0060 -0.0005 -0.0005 -0.0005 -0.0080
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0533 -0.0084 +0.0078 -0.0007 +0.0020 +0.0202
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1579 -0.0077 -0.0028 +0.0144 -0.0004 -0.0629
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0758 +0.0048 +0.0016 -0.0170 -0.0057 +0.0258
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2476 +0.0504 -0.0481 +0.0073 +0.0089 -0.0267
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1018 +0.0031 -0.0032 -0.0081 +0.0006 +0.0253
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0443 +0.0011 -0.0008 -0.0084 -0.0000 +0.0022
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2188 +0.0036 -0.0008 +0.0016 +0.0018 +0.0137
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1144 +0.0005 -0.0096 -0.0297 +0.0070 +0.1028
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0815 +0.0056 -0.0034 -0.0033 +0.0038 -0.0308
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0605 +0.0405 -0.0089 +0.0322 +0.0276 -0.0843
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1392 +0.0343 +0.0202 -0.0086 +0.0005 -0.1691
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1223 +0.0169 -0.0058 +0.0004 +0.0004 -0.0880
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1260 +0.0117 -0.0078 +0.0011 -0.0001 -0.1347
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1457 +0.0441 -0.0007 -0.0136 +0.0007 -0.1530
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1341 +0.0164 -0.0031 -0.0002 +0.0007 -0.0859
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1368 +0.0170 -0.0063 +0.0017 +0.0006 -0.1318
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2321 +0.0445 +0.0761 -0.1281 +0.0017 -0.3404
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0439 -0.0103 +0.0134 -0.0147 -0.0018 -0.1056
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2983 -0.0030 +0.1483 +0.0078 -0.0120 -0.6472
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1881 +0.0037 +0.0045 +0.0051 +0.0002 -0.1626
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0433 +0.0676 -0.0087 -0.0168 +0.0006 -0.1090
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1850 +0.0316 +0.0062 -0.0049 +0.0001 -0.1504
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2226 -0.0093 +0.0378 -0.0706 +0.0033 -0.3574
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0641 +0.0977 -0.0155 +0.0159 +0.0001 -0.1838
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5260 +0.0737 +0.1982 -0.0827 -0.0008 -0.7483
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0632 +0.0149 -0.0182 -0.0054 +0.1015 -0.1591
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0407 +0.0035 +0.0005 +0.0043 +0.0189 -0.0597
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0513 -0.0157 -0.0104 +0.0083 +0.0352 -0.0961
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0545 -0.0042 +0.0002 -0.0084 +0.0711 -0.1362
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0384 +0.0032 -0.0030 +0.0035 +0.0313 -0.0645
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0556 +0.0000 +0.0073 -0.0081 +0.0305 -0.1002
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0510 +0.0146 +0.0452 -0.0355 +0.0761 -0.2528
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0191 -0.0057 -0.0062 -0.0031 +0.0154 -0.0448
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0574 -0.1294 +0.1626 +0.0090 +0.0813 -0.5244
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0340 -0.0046 +0.0074 +0.0016 +0.0039 -0.0390
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0099 +0.0109 -0.0066 +0.0090 -0.0065 -0.0269
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0396 -0.0053 +0.0093 +0.0025 +0.0083 -0.0510
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0764 -0.0166 +0.0170 -0.0166 +0.0315 -0.1725
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0219 +0.0068 -0.0006 -0.0039 +0.0560 -0.1079
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.2276 -0.0891 -0.0032 -0.0082 +0.0618 -0.2647
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 16.0700 -8 -1.2500 -3.8000 -1.0600 -2.9600 -33.2364% -7.2171% -19.1243% -6.1880% -15.5544%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 8.2700 -4.4800 -0.8000 -0.0900 -1.0200 +0.1400 -35.1373% -8.8203% -1.0766% -10.9795% +1.7220%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 8.3600 -3.9500 -0.6000 -1.3000 -2.4500 -1.4300 -32.0877% -6.6964% -13.4576% -22.6642% -14.6067%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.6700 +0.4400 +0.2600 -0.2700 +0.3900 +10.4019% +5.8957% -5.4656% +9.1121%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.4300 -0.9500 +0.0500 -0.3200 -0.1100 -0.1300 -17.6580% +1.1416% -6.7368% -2.4229% -2.8509%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.6300 -0.8000 +0.4900 +0.1900 -0.0300 +0.3900 -14.7330% +11.8357% +4.2793% -0.6438% +9.1981%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.8800 -0.6700 +0.4600 +0.3500 +0.4200 +0.3400 -12.0721% +10.4072% +7.7263% +9.4170% +7.4890%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 13.8500 -13.8100 -5.9100 -4.4700 -5.4300 -4.0500 -49.9277% -29.9089% -24.3996% -28.1639% -22.6257%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.2100 -0.5800 +0.6200 +0.5600 +1.1200 +0.8500 -10.0173% +13.5076% +12.0430% +27.3839% +19.4954%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 4.9300 -1.3300 +0.5300 -0.9500 -0.0800 -21.2460% +12.0455% -16.1565% -1.5968%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.6000 +0.0800 +0.8700 -0.2000 +0.9600 +0.7700 +1.7699% +23.3244% -4.1667% +26.3736% +20.1044%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.3600 -1.3800 +0.8500 +0.4400 +0.9200 +0.6400 -24.0418% +24.2165% +11.2245% +26.7442% +17.2043%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.0900 -0.9800 +0.5600 +0.5800 +0.3500 +0.6200 -13.8614% +10.1266% +10.5263% +6.0976% +11.3346%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.1600 -1.4300 +0.4300 +0.0200 +0.6200 +0.2700 -18.8406% +7.5044% +0.3257% +11.1913% +4.5840%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 4.7700 -1.6800 +0.1000 +0.4700 +0.3600 +0.3500 -26.0465% +2.1413% +10.9302% +8.1633% +7.9186%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.3200 -2.0600 +0.3900 +0.6900 -0.3000 +0.3600 -27.9133% +7.9108% +14.9028% -5.3381% +7.2581%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.3600 -0.3800 +0.7000 +0.9700 +0.7700 -8.0169% +19.1257% +28.6136% +21.4485%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.2800 -0.9800 +0.4400 +0.5200 +0.2200 -18.6312% +11.4583% +13.8298% +5.4187%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 3.9300 -0.7200 +0.5000 +0.2200 +0.4800 +0.3800 -15.4839% +14.5773% +5.9299% +13.9130% +10.7042%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.7000 +0.5300 +1.4100 +1.0100 +1.4300 +1.1800 +12.7098% +42.8571% +27.3713% +43.7309% +33.5227%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.1000 -1.1800 +0.5700 +0.5000 +0.6100 +0.4000 -22.3485% +16.1473% +13.8889% +17.4785% +10.8108%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.3900 -0.1200 +1.5700 +1.2400 +0.5800 +1.3600 -2.1779% +41.0995% +29.8795% +12.0582% +33.7469%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.3100 -0.4200 +0.8500 +0.7400 +0.5400 -8.8795% +24.5665% +20.7283% +14.3236%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.0500 +0.4000 +1.4300 +1.3200 +1.2700 +1.5500 +8.6022% +39.5028% +35.3887% +33.5979% +44.2857%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 6.4200 -2.6200 -0.1300 +0.3200 -0.7900 -28.9823% -1.9847% +5.2459% -10.9570%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.4600 +0.9900 +1.3200 -0.1200 +0.2400 +22.1477% +31.8841% -2.1505% +4.5977%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 22.2000 -3.9800 -2.0800 -15.2024% -8.5667%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 11.2500 -1.6600 -1.1700 -12.8582% -9.4203%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 12.3700 +0.3100 -2.0400 +2.5705% -14.1568%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 32.8800 +5.3700 +4.6000 +19.5202% +16.2659%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 33.0700 +5.4000 +4.5700 +19.5157% +16.0351%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png