Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1344098 +247604 +37093 +32143 +50557 +50557 +22.5814% +2.8380% +2.4500% +3.9084% +3.9084%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 658505 +72183 +42743 +47795 +58624 +58624 +12.3112% +6.9415% +7.8261% +9.7726% +9.7726%
MTAC_3P_Standard 596590 623022 617574 607435 607435 661942 +65352 +38920 +44368 +54507 +54507 +10.9543% +6.2470% +7.1842% +8.9733% +8.9733%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 155362 +17814 +18523 +19802 +19802 +12.9511% +13.5363% +14.6076% +14.6076%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 174479 +18838 +17928 +17970 +19444 +19635 +12.1035% +11.4519% +11.4818% +12.5417% +12.6805%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 157555 +19046 +18170 +18263 +19670 +19768 +13.7507% +13.0358% +13.1113% +14.2655% +14.3468%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 177203 +18241 +18471 +18043 +19281 +19281 +11.4751% +11.6366% +11.3364% +12.2092% +12.2092%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1335761 +313025 +181092 +211888 +151677 +151677 +30.6066% +15.6835% +18.8534% +12.8096% +12.8096%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 55460 +14578 +13760 +13035 +13360 +13360 +35.6587% +32.9976% +30.7248% +31.7340% +31.7340%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 53123 +12054 +10721 +11100 +11971 +11971 +29.3506% +25.2842% +26.4141% +29.0897% +29.0897%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 43434 +34694 +20319 +20419 +20521 +20521 +396.9565% +87.9040% +88.7204% +89.5605% +89.5605%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 30700 +13765 +13147 +12291 +12352 +12352 +81.2814% +74.8989% +66.7663% +67.3207% +67.3207%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 120364 +20456 +17473 +21381 +21716 +21716 +20.4748% +16.9820% +21.6007% +22.0136% +22.0136%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 87537 +16439 +14809 +16092 +16411 +16411 +23.1216% +20.3622% +22.5236% +23.0731% +23.0731%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 127433 +21729 +20936 +21811 +22999 +22921 +20.5565% +19.6588% +20.6501% +22.0225% +21.9315%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 135065 +19908 +17749 +20743 +21984 +21815 +17.2877% +15.1292% +18.1444% +19.4409% +19.2627%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 19972 +9778 +9166 +8734 +8739 +8739 +95.9192% +84.8232% +77.7185% +77.7976% +77.7976%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 20394 +5587 +4961 +4353 +4695 +4695 +37.7322% +32.1454% +27.1367% +29.9064% +29.9064%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8544 +7283 +6512 +6094 +6158 +6158 +577.5575% +320.4724% +248.7347% +258.0889% +258.0889%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14987 +13551 +10204 +9297 +9256 +9256 +943.6630% +213.3389% +163.3919% +161.5076% +161.5076%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 32297 +10587 +10402 +9717 +9834 +9834 +48.7655% +47.5086% +43.0337% +43.7787% +43.7787%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 32945 +7085 +6802 +6685 +7320 +7320 +27.3975% +26.0184% +25.4570% +28.5659% +28.5659%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 19951 +16467 +13053 +13117 +13117 +472.6464% +189.2288% +191.9374% +191.9374%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 29088 +18389 +17614 +16206 +16199 +16199 +171.8759% +153.5123% +125.8034% +125.6808% +125.6808%
SCP_Astral_MBR 92167 93585 91884 90864 90838 111567 +19400 +17982 +19683 +20703 +20729 +21.0487% +19.2146% +21.4216% +22.7846% +22.8197%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 60656 +3957 +4863 +4765 +4765 +6.9790% +8.7161% +8.5255% +8.5255%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1928371 +152243 +153025 +8.5716% +8.6194%
EWZ_2P_MBR_Exploris_Human 836809 836809 905762 +68953 +68953 +8.2400% +8.2400%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1013946 +99022 +99997 +10.8230% +10.9412%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2310912 +232878 +232876 +11.2067% +11.2065%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2310912 +232878 +232876 +11.2067% +11.2065%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 150824 +39320 +17205 +19465 +18793 +18793 +35.2633% +12.8762% +14.8182% +14.2338% +14.2338%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 127515 +19248 +10163 +12856 +12699 +12699 +17.7783% +8.6603% +11.2124% +11.0603% +11.0603%
MTAC_3P_Standard 110265 118693 115800 116148 116148 128630 +18365 +9937 +12830 +12482 +12482 +16.6553% +8.3720% +11.0794% +10.7466% +10.7466%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 58522 +9664 +9490 +9527 +9527 +19.7798% +19.3547% +19.4448% +19.4448%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 65384 +11415 +10309 +9544 +9500 +9563 +21.1510% +18.7181% +17.0917% +16.9995% +17.1315%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 59712 +11091 +10047 +9423 +9252 +9297 +22.8111% +20.2295% +18.7377% +18.3353% +18.4409%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 65804 +10744 +9885 +9097 +8977 +8977 +19.5133% +17.6774% +16.0421% +15.7971% +15.7971%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 74232 +22960 +15448 +19185 +15639 +15667 +44.7808% +26.2793% +34.8520% +26.6909% +26.7515%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21372 +6932 +6414 +6123 +5665 +5665 +48.0055% +42.8801% +40.1535% +36.0667% +36.0667%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20036 +5553 +4971 +5120 +4966 +4964 +38.3415% +32.9970% +34.3256% +32.9529% +32.9352%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 17705 +8965 +8329 +8316 +8341 +8320 +102.5744% +88.8332% +88.5717% +89.0752% +88.6521%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17615 +8717 +8356 +7831 +7805 +7805 +97.9658% +90.2473% +80.0388% +79.5617% +79.5617%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 43825 +8960 +7528 +9483 +9400 +9400 +25.6991% +20.7400% +27.6134% +27.3057% +27.3057%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32276 +7627 +6810 +7157 +7053 +7053 +30.9424% +26.7415% +28.4924% +27.9626% +27.9626%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 47358 +10670 +9682 +9709 +9937 +9899 +29.0831% +25.6981% +25.7882% +26.5546% +26.4262%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 49225 +9069 +7680 +9182 +9332 +9279 +22.5844% +18.4860% +22.9303% +23.3926% +23.2289%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8103 +4437 +4154 +3894 +3857 +3857 +121.0311% +105.1912% +92.5160% +90.8384% +90.8384%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8155 +2856 +2544 +2300 +2089 +2088 +53.8970% +45.3395% +39.2827% +34.4379% +34.4157%
SCP_Astral_250pg_3ms 675 721 908 879 879 4014 +3339 +3293 +3106 +3135 +3135 +494.6667% +456.7268% +342.0705% +356.6553% +356.6553%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6282 +4846 +4544 +4137 +4119 +4117 +337.4652% +261.4499% +192.8671% +190.4300% +190.1617%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12875 +5081 +4903 +4623 +4469 +4467 +65.1912% +61.5028% +56.0228% +53.1644% +53.1280%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12627 +3469 +3285 +3256 +3213 +3212 +37.8794% +35.1638% +34.7455% +34.1300% +34.1158%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8754 +6908 +6154 +6168 +6165 +374.2145% +236.6923% +238.5151% +238.1228%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 11817 +7943 +7662 +7043 +7012 +7013 +205.0336% +184.4043% +147.5283% +145.9313% +145.9825%
SCP_Astral_MBR 24110 24991 24570 24544 24527 30895 +6785 +5904 +6325 +6351 +6368 +28.1418% +23.6245% +25.7428% +25.8760% +25.9632%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 60656 +3957 +4863 +4765 +4765 +6.9790% +8.7161% +8.5255% +8.5255%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 63064 +7793 +7917 +14.0996% +14.3562%
EWZ_2P_MBR_Exploris_Human 48465 48473 54746 +6281 +6273 +12.9599% +12.9412%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 59040 +7794 +7863 +15.2090% +15.3643%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 79772 +6494 +6495 +8.8621% +8.8636%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 79772 +6494 +6495 +8.8621% +8.8636%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91903 +3983 -985 -2079 -1538 -2383 +4.5303% -1.0604% -2.2121% -1.6460% -2.5274%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67783 +4010 +3809 +4172 +4768 +1948 +6.2879% +5.9540% +6.5586% +7.5665% +2.9589%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68110 +3793 +3646 +3891 +4725 +2143 +5.8974% +5.6559% +6.0590% +7.4544% +3.2486%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13048 +981 +1078 +1108 +809 +8.1296% +9.0058% +9.2797% +6.6100%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13302 +870 +831 +940 +974 +642 +6.9981% +6.6635% +7.6039% +7.9007% +5.0711%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12818 +810 +771 +858 +850 +638 +6.7455% +6.3999% +7.1739% +7.1023% +5.2381%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13433 +872 +968 +956 +1023 +659 +6.9421% +7.7657% +7.6621% +8.2434% +5.1589%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 159798 +13574 +6264 +5808 +3971 +2512 +9.2830% +4.0799% +3.7717% +2.5483% +1.5971%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11794 +2631 +2266 +2209 +2460 +1772 +28.7133% +23.7825% +23.0464% +26.3553% +17.6811%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11654 +2356 +1893 +2242 +2101 +1665 +25.3388% +19.3935% +23.8207% +21.9931% +16.6683%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9830 +7380 +3746 +3583 +3714 +3481 +301.2245% +61.5713% +57.3555% +60.7260% +54.8275%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6794 +2091 +2206 +1836 +1871 +1845 +44.4610% +48.0820% +37.0311% +38.0053% +37.2803%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17811 +1621 +1531 +1786 +1756 +1275 +10.0124% +9.4042% +11.1451% +10.9374% +7.7104%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15072 +1473 +1231 +1384 +1401 +1088 +10.8317% +8.8939% +10.1110% +10.2480% +7.7803%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18172 +1920 +1896 +2055 +2247 +1714 +11.8139% +11.6491% +12.7505% +14.1099% +10.4144%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18753 +1736 +1575 +1840 +2008 +1404 +10.2016% +9.1687% +10.8792% +11.9916% +8.0927%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5778 +2131 +1865 +1914 +2239 +1964 +58.4316% +47.6616% +49.5342% +63.2665% +51.4945%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6047 +1747 +1444 +1250 +1070 +878 +40.6279% +31.3708% +26.0580% +21.4989% +16.9859%
SCP_Astral_250pg_3ms 576 22 936 741 736 2945 +2369 +2923 +2009 +2204 +2209 +411.2847% +13286.3636% +214.6368% +297.4359% +300.1359%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4404 +3767 +2324 +2375 +2358 +2336 +591.3658% +111.7308% +117.0527% +115.2493% +112.9594%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7839 +1594 +1493 +1823 +1712 +1620 +25.5244% +23.5266% +30.3025% +27.9419% +26.0492%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8149 +1427 +1420 +1137 +1126 +807 +21.2288% +21.1027% +16.2151% +16.0330% +10.9916%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5505 +4523 +3140 +3328 +3269 +460.5906% +132.7696% +152.8709% +146.1986%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7515 +3807 +3508 +3470 +3597 +3412 +102.6699% +87.5468% +85.7849% +91.8070% +83.1587%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21265 +1100 +1136 +1191 +1472 +1367 +5.4550% +5.6436% +5.9330% +7.4370% +6.8700%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4973 +288 +273 +341 +234 +6.1473% +5.8085% +7.3618% +4.9378%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 252257 +6998 +4835 +2.8533% +1.9542%
EWZ_2P_MBR_Exploris_Human 115447 117345 116942 +1495 -403 +1.2950% -0.3434%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 134530 +5562 +3824 +4.3127% +2.9256%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 190655 +12481 +7112 +7.0050% +3.8748%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 190655 +12481 +7112 +7.0050% +3.8748%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8481 +636 +306 +326 +278 +232 +8.1071% +3.7431% +3.9975% +3.3890% +2.8125%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12321 +960 +827 +970 +983 +523 +8.4500% +7.1951% +8.5455% +8.6700% +4.4330%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12420 +947 +860 +943 +1024 +588 +8.2542% +7.4394% +8.2164% +8.9856% +4.9696%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4534 +406 +442 +434 +351 +9.8353% +10.8016% +10.5854% +8.3911%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4587 +372 +339 +369 +373 +250 +8.8256% +7.9802% +8.7482% +8.8514% +5.7644%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4426 +351 +292 +336 +329 +241 +8.6135% +7.0634% +8.2152% +8.0303% +5.7587%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4604 +355 +367 +360 +373 +250 +8.3549% +8.6618% +8.4826% +8.8159% +5.7418%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8165 +910 +583 +825 +686 +628 +12.5431% +7.6893% +11.2398% +9.1723% +8.3322%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4254 +1009 +865 +843 +936 +693 +31.0940% +25.5238% +24.7142% +28.2098% +19.4608%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4211 +957 +778 +920 +777 +719 +29.4100% +22.6624% +27.9550% +22.6267% +20.5899%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3729 +1279 +1333 +1279 +1332 +1295 +52.2041% +55.6344% +52.2041% +55.5695% +53.2046%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3671 +1163 +1235 +1037 +1029 +1088 +46.3716% +50.6979% +39.3698% +38.9478% +42.1216%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6229 +650 +573 +725 +683 +575 +11.6508% +10.1308% +13.1722% +12.3152% +10.1698%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5309 +588 +471 +526 +498 +465 +12.4550% +9.7354% +10.9973% +10.3513% +9.5995%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6405 +794 +750 +809 +852 +692 +14.1508% +13.2626% +14.4568% +15.3431% +12.1127%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6547 +701 +598 +704 +742 +582 +11.9911% +10.0521% +12.0486% +12.7821% +9.7569%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2206 +914 +782 +800 +918 +847 +70.7430% +54.9157% +56.8990% +71.2733% +62.3252%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2260 +692 +600 +502 +387 +390 +44.1327% +36.1446% +28.5552% +20.6620% +20.8556%
SCP_Astral_250pg_3ms 307 8 350 283 281 1252 +945 +1244 +902 +969 +971 +307.8176% +15550% +257.7143% +342.4028% +345.5516%
SCP_Astral_250pg_6ms 637 756 751 766 767 1713 +1076 +957 +962 +947 +946 +168.9168% +126.5873% +128.0959% +123.6292% +123.3377%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2842 +635 +567 +673 +612 +625 +28.7721% +24.9231% +31.0281% +27.4439% +28.1912%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2970 +567 +582 +493 +431 +372 +23.5955% +24.3719% +19.9031% +16.9752% +14.3187%
SCP_Astral_500pg_3ms 525 902 828 835 2179 +1654 +1277 +1351 +1344 +315.0476% +141.5743% +163.1643% +160.9581%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2799 +1481 +1352 +1313 +1364 +1331 +112.3672% +93.4347% +88.3580% +95.0523% +90.6676%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5206 +498 +486 +494 +491 +490 +10.5777% +10.2966% +10.4839% +10.4136% +10.3902%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4973 +288 +273 +341 +234 +6.1473% +5.8085% +7.3618% +4.9378%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7431 +390 +325 +5.5390% +4.5736%
EWZ_2P_MBR_Exploris_Human 6167 6284 6331 +164 +47 +2.6593% +0.7479%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7381 +494 +418 +7.1729% +6.0032%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6314 +510 +359 +8.7870% +6.0285%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6314 +510 +359 +8.7870% +6.0285%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91887 -2392
MTAC_3P_Alternating 65832 67781 +1949
MTAC_3P_Standard 65967 68108 +2141
MTAC_Yeast_Alternating_3min 12239 13040 +801
MTAC_Yeast_Alternating_5min 12660 13292 +632
MTAC_Yeast_Standard_3min 12180 12813 +633
MTAC_Yeast_Standard_5min 12772 13425 +653
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 159786 +2501
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11787 +1765
SCP_Astral_1000pg_24ms 9989 11652 +1663
SCP_Astral_1000pg_3ms 6349 9825 +3476
SCP_Astral_1000pg_6ms 4949 6786 +1837
SCP_Astral_10ng_12ms 16536 17803 +1267
SCP_Astral_10ng_24ms 13982 15072 +1090
SCP_Astral_10ng_3ms 16458 18157 +1699
SCP_Astral_10ng_6ms 17349 18749 +1400
SCP_Astral_250pg_12ms 3814 5777 +1963
SCP_Astral_250pg_24ms 5169 6046 +877
SCP_Astral_250pg_3ms 736 2945 +2209
SCP_Astral_250pg_6ms 2066 4404 +2338
SCP_Astral_500pg_12ms 6219 7838 +1619
SCP_Astral_500pg_24ms 7342 8149 +807
SCP_Astral_500pg_3ms 2234 5501 +3267
SCP_Astral_500pg_6ms 4103 7513 +3410
SCP_Astral_MBR 19891 21265 +1374
Seer_Astral_45 242898
Seer_Astral_single 4739 4973 +234
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 252231 +4809
EWZ_2P_MBR_Exploris_Human 117340 116936 -404
EWZ_2P_MBR_Exploris_YeastHuman 130702 134524 +3822
MacCoss_Eclipse_Normalization_noNorm 183540 190654 +7114
MacCoss_Eclipse_Normalization_yesNorm 183540 190654 +7114

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0012 -0.0001 -0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0005 +0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0000 +0.0005 +0.0001 +0.0010 +0.0007 +0.0007
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0006 +0.0007 -0.0011 -0.0001 +0.0001 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0001 +0.0017 +0.0020 +0.0027 +0.0027
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0004 +0.0000 +0.0009 +0.0010 +0.0011 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0002 +0.0017 +0.0011 +0.0010 +0.0018 +0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0010 +0.0021 +0.0030 +0.0034 +0.0036
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0001 -0.0004 -0.0004
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0006 +0.0007 +0.0003 +0.0017 +0.0001 +0.0001
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0001 +0.0022 +0.0029 +0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0008 +0.0062 +0.0041 +0.0040 +0.0054 +0.0054
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0020 +0.0050 +0.0068 +0.0050 +0.0058 +0.0066
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0012 +0.0015 +0.0023 +0.0048 +0.0038 +0.0038
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0002 +0.0020 +0.0015 +0.0022 +0.0022
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0005 +0.0025 -0.0004 +0.0019 +0.0018 +0.0018
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0010 +0.0035 +0.0037 +0.0029 +0.0028 +0.0028
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0004 +0.0012 +0.0003 +0.0025 +0.0016 +0.0016
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0035 +0.0074 +0.0075 +0.0032 +0.0087 +0.0087
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0010 -0.0008 +0.0001 +0.0014 +0.0021 +0.0021
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0038 +0.0107 +0.0038 +0.0038
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0027 +0.0078 +0.0054 +0.0077 +0.0072
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0008 +0.0030 +0.0018 +0.0036 +0.0034 +0.0034
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0009 +0.0021 +0.0032 +0.0021 +0.0019 +0.0019
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0028 +0.0041 +0.0051 +0.0063 +0.0063
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0049 +0.0080 +0.0082 +0.0064 +0.0064
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0000 +0.0027 +0.0020 +0.0014 +0.0022 +0.0022
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0010 +0.0032 +0.0032
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0010 +0.0016 +0.0017
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 0.0004 +0.0033 +0.0018
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0017 -0.0007 -0.0006 -0.0022 -0.0024 -0.0006
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0011 +0.0002 +0.0014 +0.0018 +0.0015 +0.0032
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 0.0012 +0.0077 +0.0064 +0.0059 +0.0055
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0005 +0.0046 +0.0043 +0.0053 +0.0038 +0.0062
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0032 +0.0026 +0.0015 -0.0013 -0.0005 -0.0008
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0009 +0.0045 +0.0054 +0.0065 +0.0063
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 0.0000 +0.0003 +0.0031
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0013 +0.0017 -0.0011 +0.0016 -0.0004 +0.0005
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0016 +0.0033 +0.0026 +0.0026 +0.0024
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0025 +0.0045 +0.0033 +0.0045 +0.0045 +0.0058
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0032 +0.0091 +0.0091 +0.0103 +0.0103 +0.0118
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0037 +0.0054 +0.0086 +0.0080 +0.0082 +0.0083
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0041 +0.0013 -0.0002 +0.0012 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 0.0012 +0.0045 +0.0035 +0.0028 +0.0057 +0.0048
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0002 +0.0038 +0.0075 +0.0068 +0.0062 +0.0062
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0032 +0.0022 -0.0012 +0.0022 +0.0014 +0.0016
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0023 +0.0076 +0.0099 +0.0057 +0.0086 +0.0084
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0006 +0.0048 +0.0048 +0.0032 +0.0019 +0.0049
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0022 +0.0006 -0.0022 +0.0064 -0.0022 -0.0022
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0030 +0.0129 +0.0096 +0.0114 +0.0118 +0.0118
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0004 +0.0040 +0.0044 -0.0010 +0.0025 +0.0028
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0004 +0.0024 +0.0005 +0.0055 +0.0066 +0.0064
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0016 +0.0058 -0.0054 -0.0004 +0.0017 +0.0018
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0078 +0.0123 +0.0123 +0.0086 +0.0133 +0.0120
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0009 +0.0068 +0.0038 +0.0034 +0.0059 +0.0065
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0048 +0.0122 +0.0121
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0004 +0.0009 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0001 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0002 +0.0003 -0.0001 +0.0004 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0002 +0.0007 -0.0004 +0.0002 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0000 +0.0010 +0.0013 +0.0015 +0.0015
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0002 +0.0006 +0.0010 +0.0012 +0.0011 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0000 +0.0008 +0.0007 +0.0008 +0.0010 +0.0010
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0011 +0.0019 +0.0021 +0.0025 +0.0026
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0006 +0.0004 +0.0004
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0010 +0.0014 +0.0005 +0.0016 +0.0010 +0.0010
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0003 +0.0018 +0.0032 +0.0021
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0011 +0.0056 +0.0039 +0.0041 +0.0048 +0.0048
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0028 +0.0049 +0.0058 +0.0054 +0.0055 +0.0062
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0016 +0.0015 +0.0022 +0.0044 +0.0040 +0.0040
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0003 +0.0019 +0.0013 +0.0018 +0.0018
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0004 +0.0018 +0.0001 +0.0016 +0.0012 +0.0012
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0010 +0.0030 +0.0031 +0.0026 +0.0025 +0.0025
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0002 +0.0007 -0.0001 +0.0014 +0.0010 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0034 +0.0064 +0.0061 +0.0037 +0.0066 +0.0066
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0000 +0.0007 +0.0008 +0.0013 +0.0014 +0.0014
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0036 +0.0096 +0.0036 +0.0036
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0033 +0.0069 +0.0054 +0.0063 +0.0063
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0016 +0.0035 +0.0020 +0.0036 +0.0029 +0.0029
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0016 +0.0032 +0.0033 +0.0034 +0.0033 +0.0033
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0042 +0.0023 +0.0046 +0.0058 +0.0058
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0050 +0.0076 +0.0069 +0.0060 +0.0060
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0009 +0.0026 +0.0024 +0.0017 +0.0022 +0.0022
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0010 +0.0032 +0.0032
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0016 +0.0027 +0.0029
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0001 +0.0016 +0.0006
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0004 -0.0003 -0.0002 -0.0007 -0.0006 +0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0002 +0.0007 +0.0012 +0.0019 +0.0017 +0.0022
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0023 +0.0059 +0.0057 +0.0052 +0.0045
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0013 +0.0050 +0.0034 +0.0038 +0.0026 +0.0038
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0015 +0.0022 +0.0020 -0.0002 +0.0000 +0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0007 +0.0030 +0.0034 +0.0044 +0.0041
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 0.0005 +0.0009 +0.0025
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0011 +0.0015 -0.0018 +0.0006 +0.0005 +0.0008
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0009 +0.0028 +0.0014 +0.0024 +0.0031
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0001 +0.0050 +0.0057 +0.0059 +0.0044 +0.0061
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0025 +0.0069 +0.0058 +0.0065 +0.0056 +0.0089
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0020 +0.0045 +0.0055 +0.0060 +0.0060 +0.0053
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0031 +0.0016 -0.0000 +0.0011 +0.0013
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 0.0010 +0.0042 +0.0023 +0.0024 +0.0035 +0.0040
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0007 +0.0028 +0.0053 +0.0045 +0.0040 +0.0047
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0025 +0.0014 -0.0006 +0.0013 +0.0004 +0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0021 +0.0059 +0.0062 +0.0040 +0.0051 +0.0065
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0010 +0.0023 +0.0041 +0.0013 +0.0010 +0.0038
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0004 +0.0056 +0.0077 +0.0042 -0.0004 -0.0004
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0028 +0.0128 +0.0096 +0.0083 +0.0076 +0.0076
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0028 +0.0067 +0.0063 +0.0035 +0.0055 +0.0050
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0000 +0.0019 -0.0001 +0.0043 +0.0045 +0.0067
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0028 +0.0060 -0.0038 +0.0000 +0.0025 +0.0026
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0070 +0.0090 +0.0092 +0.0061 +0.0098 +0.0088
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0011 +0.0034 +0.0028 +0.0033 +0.0039 +0.0051
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0052 +0.0126 +0.0121
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 8663 -15732 -15925

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 414 -357 -348

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0478 +0.0162 +0.0168

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 785 -59 +1414

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -46 -236 -102

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1690 +0.0231 +0.0269 +0.0290 +0.0316 +0.0315
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1616 +0.0223 +0.0254 +0.0265 +0.0292 +0.0291
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1657 +0.0202 +0.0233 +0.0250 +0.0248
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1530 -0.0001 +0.0121 +0.0154 +0.0174 +0.0175
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1751 +0.0053 +0.0111 +0.0135 +0.0151 +0.0153
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1516 +0.0013 +0.0150 +0.0179 +0.0193 +0.0192
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1541 +0.0061 +0.0042 +0.0046 +0.0036 +0.0035
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5968 +0.0099 +0.0099
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2130 +0.0414 +0.0413

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0860 +0.0097 +0.0121 +0.0133 +0.0140 +0.0102
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0814 +0.0091 +0.0112 +0.0115 +0.0126 +0.0096
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0750 +0.0077 +0.0090 +0.0092 +0.0063
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0662 -0.0115 +0.0060 +0.0070 +0.0074 +0.0061
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0795 +0.0003 +0.0039 +0.0042 +0.0022 +0.0020
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0645 -0.0125 +0.0078 +0.0076 +0.0077 +0.0062
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1015 -0.0014 -0.0005 -0.0022 -0.0012 -0.0018
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5785 -0.0096 -0.0095
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1359 +0.0126 +0.0113

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0129 -0.0020 +0.0070 +0.0012 +0.0000 -0.0648
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0040 -0.0076 +0.0055 -0.0002 -0.0001 -0.0367
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0009 +0.0007 -0.0023 -0.0001 -0.0000 -0.0000
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0622 +0.0012 -0.0008 +0.0020 -0.0002 -0.0645
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0606 -0.0054 -0.0006 -0.0003 +0.0001 -0.0117
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0510 -0.0080 +0.0050 -0.0016 -0.0001 +0.0220
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1272 -0.0059 -0.0059 +0.0211 -0.0012 -0.1080
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0819 +0.0062 +0.0047 -0.0191 -0.0001 +0.0215
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1844 +0.0183 -0.0240 +0.0287 +0.0020 -0.0961
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1042 +0.0048 -0.0054 -0.0067 +0.0002 +0.0157
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0468 +0.0009 +0.0001 -0.0089 -0.0000 +0.0012
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2073 +0.0051 -0.0017 +0.0004 +0.0004 +0.0033
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1361 -0.0032 -0.0062 -0.0160 +0.0006 +0.1129
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0793 +0.0043 -0.0045 -0.0054 -0.0001 -0.0226
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0453 +0.0169 -0.0238 +0.0355 +0 -0.0512
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0192 +0.0009 +0.0076 -0.0005 +0.0006 -0.0548
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0030 -0.0089 +0.0045 +0.0004 +0.0011 -0.0392
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0074 +0.0054 -0.0044 +0.0010 +0.0033 +0.0005
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0613 +0.0013 +0.0005 -0.0055 +0.0004 -0.0598
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0606 -0.0060 -0.0005 -0.0005 -0.0005 -0.0090
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0495 -0.0084 +0.0078 -0.0007 +0.0020 +0.0165
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1538 -0.0077 -0.0028 +0.0144 -0.0004 -0.0669
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0768 +0.0048 +0.0016 -0.0170 -0.0057 +0.0269
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2257 +0.0504 -0.0481 +0.0073 +0.0089 -0.0486
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1038 +0.0031 -0.0032 -0.0081 +0.0006 +0.0273
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0445 +0.0011 -0.0008 -0.0084 -0.0000 +0.0024
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2167 +0.0036 -0.0008 +0.0016 +0.0018 +0.0116
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1097 +0.0005 -0.0096 -0.0297 +0.0070 +0.0982
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0818 +0.0056 -0.0034 -0.0033 +0.0038 -0.0305
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0465 +0.0405 -0.0089 +0.0322 +0.0276 -0.0984
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1421 +0.0343 +0.0202 -0.0086 +0.0005 -0.1663
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1238 +0.0169 -0.0058 +0.0004 +0.0004 -0.0865
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1300 +0.0117 -0.0078 +0.0011 -0.0001 -0.1308
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1412 +0.0441 -0.0007 -0.0136 +0.0007 -0.1574
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1328 +0.0164 -0.0031 -0.0002 +0.0007 -0.0872
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1363 +0.0170 -0.0063 +0.0017 +0.0006 -0.1323
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2126 +0.0445 +0.0761 -0.1281 +0.0017 -0.3600
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0425 -0.0103 +0.0134 -0.0147 -0.0018 -0.1069
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2570 -0.0030 +0.1483 +0.0078 -0.0120 -0.6885
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1845 +0.0037 +0.0045 +0.0051 +0.0002 -0.1661
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0427 +0.0676 -0.0087 -0.0168 +0.0006 -0.1096
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1857 +0.0316 +0.0062 -0.0049 +0.0001 -0.1497
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2224 -0.0093 +0.0378 -0.0706 +0.0033 -0.3577
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0596 +0.0977 -0.0155 +0.0159 +0.0001 -0.1884
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5731 +0.0737 +0.1982 -0.0827 -0.0008 -0.7012
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0715 +0.0149 -0.0182 -0.0054 +0.1015 -0.1508
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0390 +0.0035 +0.0005 +0.0043 +0.0189 -0.0614
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0474 -0.0157 -0.0104 +0.0083 +0.0352 -0.1000
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0503 -0.0042 +0.0002 -0.0084 +0.0711 -0.1404
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0385 +0.0032 -0.0030 +0.0035 +0.0313 -0.0644
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0528 +0.0000 +0.0073 -0.0081 +0.0305 -0.1031
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0492 +0.0146 +0.0452 -0.0355 +0.0761 -0.2546
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0196 -0.0057 -0.0062 -0.0031 +0.0154 -0.0444
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0562 -0.1294 +0.1626 +0.0090 +0.0813 -0.5256
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0336 -0.0046 +0.0074 +0.0016 +0.0039 -0.0394
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0096 +0.0109 -0.0066 +0.0090 -0.0065 -0.0273
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0370 -0.0053 +0.0093 +0.0025 +0.0083 -0.0537
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0736 -0.0166 +0.0170 -0.0166 +0.0315 -0.1754
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0213 +0.0068 -0.0006 -0.0039 +0.0560 -0.1085
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1639 -0.0891 -0.0032 -0.0082 +0.0618 -0.3283
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 19.7000 -4.3700 +2.3800 -0.1700 +2.5700 +0.6700 -18.1554% +13.7413% -0.8556% +15.0029% +3.5208%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 11.1000 -1.6500 +2.0300 +2.7400 +1.8100 +2.9700 -12.9412% +22.3815% +32.7751% +19.4833% +36.5314%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 11.0500 -1.2600 +2.0900 +1.3900 +0.2400 +1.2600 -10.2356% +23.3259% +14.3892% +2.2202% +12.8703%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.9400 +0.7100 +0.5300 +0 +0.6600 +16.7849% +12.0181% +0% +15.4206%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.1300 -0.2500 +0.7500 +0.3800 +0.5900 +0.5700 -4.6468% +17.1233% +8.0000% +12.9956% +12.5000%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.6500 -0.7800 +0.5100 +0.2100 -0.0100 +0.4100 -14.3646% +12.3188% +4.7297% -0.2146% +9.6698%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.0200 -0.5300 +0.6000 +0.4900 +0.5600 +0.4800 -9.5495% +13.5747% +10.8168% +12.5561% +10.5727%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 16.1600 -11.5000 -3.6000 -2.1600 -3.1200 -1.7400 -41.5763% -18.2186% -11.7904% -16.1826% -9.7207%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.5700 -1.2200 -0.0200 -0.0800 +0.4800 +0.2100 -21.0708% -0.4357% -1.7204% +11.7359% +4.8165%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.6300 -0.6300 +1.2300 -0.2500 +0.6200 -10.0639% +27.9545% -4.2517% +12.3752%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.9600 +0.4400 +1.2300 +0.1600 +1.3200 +1.1300 +9.7345% +32.9759% +3.3333% +36.2637% +29.5039%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.4300 -1.3100 +0.9200 +0.5100 +0.9900 +0.7100 -22.8223% +26.2108% +13.0102% +28.7791% +19.0860%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 5.9500 -1.1200 +0.4200 +0.4400 +0.2100 +0.4800 -15.8416% +7.5949% +7.9855% +3.6585% +8.7751%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 5.7000 -1.8900 -0.0300 -0.4400 +0.1600 -0.1900 -24.9012% -0.5236% -7.1661% +2.8881% -3.2258%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.5400 -0.9100 +0.8700 +1.2400 +1.1300 +1.1200 -14.1085% +18.6296% +28.8372% +25.6236% +25.3394%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.5000 -0.8800 +1.5700 +1.8700 +0.8800 +1.5400 -11.9241% +31.8458% +40.3888% +15.6584% +31.0484%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.8500 +0.1100 +1.1900 +1.4600 +1.2600 +2.3207% +32.5137% +43.0678% +35.0975%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.3700 -0.8900 +0.5300 +0.6100 +0.3100 -16.9202% +13.8021% +16.2234% +7.6355%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.2200 -0.4300 +0.7900 +0.5100 +0.7700 +0.6700 -9.2473% +23.0321% +13.7466% +22.3188% +18.8732%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.5800 +0.4100 +1.2900 +0.8900 +1.3100 +1.0600 +9.8321% +39.2097% +24.1192% +40.0612% +30.1136%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.5300 -0.7500 +1.0000 +0.9300 +1.0400 +0.8300 -14.2045% +28.3286% +25.8333% +29.7994% +22.4324%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.0200 -0.4900 +1.2000 +0.8700 +0.2100 +0.9900 -8.8929% +31.4136% +20.9639% +4.3659% +24.5658%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.6900 -0.0400 +1.2300 +1.1200 +0.9200 -0.8457% +35.5491% +31.3725% +24.4032%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.9200 +0.2700 +1.3000 +1.1900 +1.1400 +1.4200 +5.8065% +35.9116% +31.9035% +30.1587% +40.5714%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.1400 -1.9000 +0.5900 +1.0400 -0.0700 -21.0177% +9.0076% +17.0492% -0.9709%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 6.0900 +1.6200 +1.9500 +0.5100 +0.8700 +36.2416% +47.1014% +9.1398% +16.6667%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 24.5200 -1.6600 +0.2400 -6.3407% +0.9885%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 13.5500 +0.6400 +1.1300 +4.9574% +9.0982%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 14.9000 +2.8400 +0.4900 +23.5489% +3.4004%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 36.0500 +8.5400 +7.7700 +31.0433% +27.4752%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 38.4400 +10.7700 +9.9400 +38.9230% +34.8772%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png