Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1356075 +259581 +49070 +44120 +62534 +62534 +23.6737% +3.7544% +3.3629% +4.8343% +4.8343%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 695607 +109285 +79845 +84897 +95726 +95726 +18.6391% +12.9669% +13.9014% +15.9575% +15.9575%
MTAC_3P_Standard 596590 623022 617574 607435 607435 700626 +104036 +77604 +83052 +93191 +93191 +17.4384% +12.4561% +13.4481% +15.3417% +15.3417%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 161721 +24173 +24882 +26161 +26161 +17.5742% +18.1834% +19.2985% +19.2985%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 182016 +26375 +25465 +25507 +26981 +27172 +16.9460% +16.2663% +16.2975% +17.4032% +17.5480%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 162234 +23725 +22849 +22942 +24349 +24447 +17.1289% +16.3927% +16.4704% +17.6589% +17.7426%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 182930 +23968 +24198 +23770 +25008 +25008 +15.0778% +15.2446% +14.9347% +15.8357% +15.8357%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1351407 +328671 +196738 +227534 +167323 +167323 +32.1364% +17.0385% +20.2455% +14.1310% +14.1310%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 57301 +16419 +15601 +14876 +15201 +15201 +40.1619% +37.4125% +35.0642% +36.1069% +36.1069%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 55311 +14242 +12909 +13288 +14159 +14159 +34.6782% +30.4443% +31.6208% +34.4066% +34.4066%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 46451 +37711 +23336 +23436 +23538 +23538 +431.4760% +100.9561% +101.8292% +102.7277% +102.7277%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31615 +14680 +14062 +13206 +13267 +13267 +86.6844% +80.1117% +71.7367% +72.3076% +72.3076%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 123528 +23620 +20637 +24545 +24880 +24880 +23.6418% +20.0571% +24.7972% +25.2210% +25.2210%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 90751 +19653 +18023 +19306 +19625 +19625 +27.6421% +24.7814% +27.0222% +27.5919% +27.5919%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 132938 +27234 +26441 +27316 +28504 +28426 +25.7644% +24.8279% +25.8620% +27.2938% +27.1988%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 140521 +25364 +23205 +26199 +27440 +27271 +22.0256% +19.7799% +22.9168% +24.2658% +24.0804%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 21165 +10971 +10359 +9927 +9932 +9932 +107.6221% +95.8634% +88.3342% +88.4181% +88.4181%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 21768 +6961 +6335 +5727 +6069 +6069 +47.0115% +41.0484% +35.7023% +38.6585% +38.6585%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 9571 +8310 +7539 +7121 +7185 +7185 +659.0008% +371.0138% +290.6531% +301.1316% +301.1316%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 16961 +15525 +12178 +11271 +11230 +11230 +1081.1281% +254.6101% +198.0844% +195.9518% +195.9518%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 34441 +12731 +12546 +11861 +11978 +11978 +58.6412% +57.3008% +52.5288% +53.3232% +53.3232%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 34962 +9102 +8819 +8702 +9337 +9337 +35.1972% +33.7337% +33.1379% +36.4371% +36.4371%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 21289 +17805 +14391 +14455 +14455 +511.0505% +208.6257% +211.5159% +211.5159%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 30714 +20015 +19240 +17832 +17825 +17825 +187.0736% +167.6835% +138.4257% +138.2962% +138.2962%
SCP_Astral_MBR 92167 93585 91884 90864 90838 117569 +25402 +23984 +25685 +26705 +26731 +27.5608% +25.6280% +27.9537% +29.3901% +29.4271%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61721 +5022 +5928 +5830 +5830 +8.8573% +10.6250% +10.4310% +10.4310%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1946306 +170178 +170960 +9.5814% +9.6297%
EWZ_2P_MBR_Exploris_Human 836809 836809 919600 +82791 +82791 +9.8937% +9.8937%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1027917 +112993 +113968 +12.3500% +12.4698%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2312458 +234424 +234422 +11.2810% +11.2809%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2312458 +234424 +234422 +11.2810% +11.2809%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 154012 +42508 +20393 +22653 +21981 +21981 +38.1224% +15.2621% +17.2451% +16.6484% +16.6484%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 136553 +28286 +19201 +21894 +21737 +21737 +26.1262% +16.3619% +19.0949% +18.9320% +18.9320%
MTAC_3P_Standard 110265 118693 115800 116148 116148 138892 +28627 +20199 +23092 +22744 +22744 +25.9620% +17.0179% +19.9413% +19.5819% +19.5819%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 59907 +11049 +10875 +10912 +10912 +22.6145% +22.1794% +22.2717% +22.2717%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 66669 +12700 +11594 +10829 +10785 +10848 +23.5320% +21.0513% +19.3929% +19.2989% +19.4335%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 60709 +12088 +11044 +10420 +10249 +10294 +24.8617% +22.2370% +20.7202% +20.3111% +20.4185%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66774 +11714 +10855 +10067 +9947 +9947 +21.2750% +19.4120% +17.7527% +17.5040% +17.5040%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75154 +23882 +16370 +20107 +16561 +16589 +46.5790% +27.8477% +36.5270% +28.2645% +28.3258%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21658 +7218 +6700 +6409 +5951 +5951 +49.9861% +44.7921% +42.0290% +37.8876% +37.8876%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20556 +6073 +5491 +5640 +5486 +5484 +41.9319% +36.4487% +37.8117% +36.4035% +36.3854%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18661 +9921 +9285 +9272 +9297 +9276 +113.5126% +99.0294% +98.7539% +99.2845% +98.8386%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17704 +8806 +8445 +7920 +7894 +7894 +98.9661% +91.2086% +80.9485% +80.4689% +80.4689%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 44345 +9480 +8048 +10003 +9920 +9920 +27.1906% +22.1726% +29.1276% +28.8163% +28.8163%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32848 +8199 +7382 +7729 +7625 +7625 +33.2630% +28.9877% +30.7695% +30.2303% +30.2303%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 49054 +12366 +11378 +11405 +11633 +11595 +33.7058% +30.1996% +30.2930% +31.0868% +30.9538%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50704 +10548 +9159 +10661 +10811 +10758 +26.2676% +22.0460% +26.6239% +27.1000% +26.9314%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8384 +4718 +4435 +4175 +4138 +4138 +128.6961% +112.3069% +99.1922% +97.4564% +97.4564%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8459 +3160 +2848 +2604 +2393 +2392 +59.6339% +50.7574% +44.4748% +39.4494% +39.4264%
SCP_Astral_250pg_3ms 675 721 908 879 879 4490 +3815 +3769 +3582 +3611 +3611 +565.1852% +522.7462% +394.4934% +410.8077% +410.8077%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 7108 +5672 +5370 +4963 +4945 +4943 +394.9861% +308.9758% +231.3753% +228.6177% +228.3141%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13451 +5657 +5479 +5199 +5045 +5043 +72.5815% +68.7280% +63.0029% +60.0167% +59.9786%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 13134 +3976 +3792 +3763 +3720 +3719 +43.4156% +40.5909% +40.1558% +39.5156% +39.5008%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 9158 +7312 +6558 +6572 +6569 +396.0997% +252.2308% +254.1377% +253.7273%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12229 +8355 +8074 +7455 +7424 +7425 +215.6686% +194.3201% +156.1584% +154.5057% +154.5587%
SCP_Astral_MBR 24110 24991 24570 24544 24527 32959 +8849 +7968 +8389 +8415 +8432 +36.7026% +31.8835% +34.1433% +34.2854% +34.3784%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61721 +5022 +5928 +5830 +5830 +8.8573% +10.6250% +10.4310% +10.4310%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64412 +9141 +9265 +16.5385% +16.8006%
EWZ_2P_MBR_Exploris_Human 48465 48473 55955 +7490 +7482 +15.4545% +15.4354%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 60249 +9003 +9072 +17.5682% +17.7267%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80576 +7298 +7299 +9.9593% +9.9608%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80576 +7298 +7299 +9.9593% +9.9608%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92336 +4416 -552 -1646 -1105 -1950 +5.0227% -0.5943% -1.7514% -1.1826% -2.0682%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 69561 +5788 +5587 +5950 +6546 +3726 +9.0759% +8.7332% +9.3537% +10.3880% +5.6596%
MTAC_3P_Standard 64317 64464 64219 63385 65967 69883 +5566 +5419 +5664 +6498 +3916 +8.6540% +8.4062% +8.8198% +10.2516% +5.9363%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13235 +1168 +1265 +1295 +996 +9.6793% +10.5681% +10.8459% +8.1379%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13452 +1020 +981 +1090 +1124 +792 +8.2046% +7.8662% +8.8173% +9.1175% +6.2559%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 13039 +1031 +992 +1079 +1071 +859 +8.5859% +8.2344% +9.0217% +8.9489% +7.0525%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13577 +1016 +1112 +1100 +1167 +803 +8.0885% +8.9210% +8.8162% +9.4037% +6.2862%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 159504 +13280 +5970 +5514 +3677 +2218 +9.0820% +3.8884% +3.5808% +2.3597% +1.4102%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12261 +3098 +2733 +2676 +2927 +2239 +33.8099% +28.6839% +27.9186% +31.3585% +22.3409%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11976 +2678 +2215 +2564 +2423 +1987 +28.8019% +22.6923% +27.2418% +25.3638% +19.8919%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 10351 +7901 +4267 +4104 +4235 +4002 +322.4898% +70.1348% +65.6955% +69.2446% +63.0335%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 7009 +2306 +2421 +2051 +2086 +2060 +49.0325% +52.7681% +41.3675% +42.3725% +41.6246%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18132 +1942 +1852 +2107 +2077 +1596 +11.9951% +11.3759% +13.1482% +12.9368% +9.6517%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15472 +1873 +1631 +1784 +1801 +1488 +13.7731% +11.7838% +13.0333% +13.1739% +10.6407%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18688 +2436 +2412 +2571 +2763 +2230 +14.9889% +14.8194% +15.9521% +17.3501% +13.5496%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19411 +2394 +2233 +2498 +2666 +2062 +14.0683% +12.9992% +14.7697% +15.9212% +11.8854%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 6266 +2619 +2353 +2402 +2727 +2452 +71.8124% +60.1329% +62.1636% +77.0557% +64.2895%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6264 +1964 +1661 +1467 +1287 +1095 +45.6744% +36.0852% +30.5816% +25.8590% +21.1840%
SCP_Astral_250pg_3ms 576 22 936 741 736 3115 +2539 +3093 +2179 +2374 +2379 +440.7986% +14059.0909% +232.7991% +320.3779% +323.2337%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 5057 +4420 +2977 +3028 +3011 +2989 +693.8776% +143.1250% +149.2361% +147.1652% +144.5358%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8636 +2391 +2290 +2620 +2509 +2417 +38.2866% +36.0857% +43.5505% +40.9499% +38.8648%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8587 +1865 +1858 +1575 +1564 +1245 +27.7447% +27.6118% +22.4615% +22.2697% +16.9572%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5983 +5001 +3618 +3806 +3747 +509.2668% +152.9810% +174.8277% +167.5760%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 8014 +4306 +4007 +3969 +4096 +3911 +116.1273% +100% +98.1211% +104.5431% +95.3205%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21677 +1512 +1548 +1603 +1884 +1779 +7.4981% +7.6904% +7.9855% +9.5185% +8.9406%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5145 +460 +445 +513 +406 +9.8186% +9.4681% +11.0751% +8.5672%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 254684 +9425 +7262 +3.8429% +2.9351%
EWZ_2P_MBR_Exploris_Human 115447 117345 118694 +3247 +1349 +2.8125% +1.1496%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 135845 +6877 +5139 +5.3323% +3.9317%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 192810 +14636 +9267 +8.2144% +5.0490%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 192810 +14636 +9267 +8.2144% +5.0490%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8528 +683 +353 +373 +325 +279 +8.7062% +4.3180% +4.5739% +3.9620% +3.3822%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12768 +1407 +1274 +1417 +1430 +970 +12.3845% +11.0840% +12.4835% +12.6125% +8.2217%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12894 +1421 +1334 +1417 +1498 +1062 +12.3856% +11.5398% +12.3464% +13.1450% +8.9757%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4563 +435 +471 +463 +380 +10.5378% +11.5103% +11.2927% +9.0844%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4605 +390 +357 +387 +391 +268 +9.2527% +8.4040% +9.1750% +9.2786% +6.1794%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4486 +411 +352 +396 +389 +301 +10.0859% +8.5148% +9.6822% +9.4948% +7.1924%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4648 +399 +411 +404 +417 +294 +9.3904% +9.7003% +9.5193% +9.8558% +6.7524%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8187 +932 +605 +847 +708 +650 +12.8463% +7.9794% +11.5395% +9.4665% +8.6241%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4418 +1173 +1029 +1007 +1100 +857 +36.1479% +30.3629% +29.5221% +33.1525% +24.0663%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4271 +1017 +838 +980 +837 +779 +31.2538% +24.4101% +29.7782% +24.3739% +22.3081%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3880 +1430 +1484 +1430 +1483 +1446 +58.3673% +61.9366% +58.3673% +61.8690% +59.4084%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3739 +1231 +1303 +1105 +1097 +1156 +49.0829% +53.4893% +41.9514% +41.5216% +44.7542%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6291 +712 +635 +787 +745 +637 +12.7621% +11.2270% +14.2987% +13.4331% +11.2664%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5440 +719 +602 +657 +629 +596 +15.2298% +12.4432% +13.7361% +13.0742% +12.3039%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6571 +960 +916 +975 +1018 +858 +17.1092% +16.1981% +17.4232% +18.3324% +15.0184%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6782 +936 +833 +939 +977 +817 +16.0109% +14.0024% +16.0705% +16.8303% +13.6966%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2370 +1078 +946 +964 +1082 +1011 +83.4365% +66.4326% +68.5633% +84.0062% +74.3929%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2317 +749 +657 +559 +444 +447 +47.7679% +39.5783% +31.7975% +23.7053% +23.9037%
SCP_Astral_250pg_3ms 307 8 350 283 281 1291 +984 +1283 +941 +1008 +1010 +320.5212% +16037.5000% +268.8571% +356.1837% +359.4306%
SCP_Astral_250pg_6ms 637 756 751 766 767 1917 +1280 +1161 +1166 +1151 +1150 +200.9419% +153.5714% +155.2597% +150.2611% +149.9348%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3178 +971 +903 +1009 +948 +961 +43.9964% +39.6923% +46.5191% +42.5112% +43.3469%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3115 +712 +727 +638 +576 +517 +29.6296% +30.4439% +25.7570% +22.6861% +19.8999%
SCP_Astral_500pg_3ms 525 902 828 835 2305 +1780 +1403 +1477 +1470 +339.0476% +155.5432% +178.3816% +176.0479%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2957 +1639 +1510 +1471 +1522 +1489 +124.3551% +104.3538% +98.9906% +106.0627% +101.4305%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5312 +604 +592 +600 +597 +596 +12.8292% +12.5424% +12.7334% +12.6617% +12.6378%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5145 +460 +445 +513 +406 +9.8186% +9.4681% +11.0751% +8.5672%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7581 +540 +475 +7.6694% +6.6845%
EWZ_2P_MBR_Exploris_Human 6167 6284 6470 +303 +186 +4.9132% +2.9599%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7504 +617 +541 +8.9589% +7.7696%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6390 +586 +435 +10.0965% +7.3048%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6390 +586 +435 +10.0965% +7.3048%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92317 -1962
MTAC_3P_Alternating 65832 69553 +3721
MTAC_3P_Standard 65967 69873 +3906
MTAC_Yeast_Alternating_3min 12239 13233 +994
MTAC_Yeast_Alternating_5min 12660 13450 +790
MTAC_Yeast_Standard_3min 12180 13038 +858
MTAC_Yeast_Standard_5min 12772 13576 +804
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 159499 +2214
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12258 +2236
SCP_Astral_1000pg_24ms 9989 11976 +1987
SCP_Astral_1000pg_3ms 6349 10346 +3997
SCP_Astral_1000pg_6ms 4949 7005 +2056
SCP_Astral_10ng_12ms 16536 18130 +1594
SCP_Astral_10ng_24ms 13982 15472 +1490
SCP_Astral_10ng_3ms 16458 18684 +2226
SCP_Astral_10ng_6ms 17349 19408 +2059
SCP_Astral_250pg_12ms 3814 6266 +2452
SCP_Astral_250pg_24ms 5169 6264 +1095
SCP_Astral_250pg_3ms 736 3112 +2376
SCP_Astral_250pg_6ms 2066 5057 +2991
SCP_Astral_500pg_12ms 6219 8635 +2416
SCP_Astral_500pg_24ms 7342 8587 +1245
SCP_Astral_500pg_3ms 2234 5974 +3740
SCP_Astral_500pg_6ms 4103 8010 +3907
SCP_Astral_MBR 19891 21677 +1786
Seer_Astral_45 242898
Seer_Astral_single 4739 5145 +406
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 254660 +7238
EWZ_2P_MBR_Exploris_Human 117340 118679 +1339
EWZ_2P_MBR_Exploris_YeastHuman 130702 135833 +5131
MacCoss_Eclipse_Normalization_noNorm 183540 192808 +9268
MacCoss_Eclipse_Normalization_yesNorm 183540 192808 +9268

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0003 +0.0009 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0002 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 0.0004 +0.0008 +0.0005 +0.0014 +0.0011 +0.0011
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 0.0001 +0.0015 -0.0003 +0.0007 +0.0009 +0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0006 +0.0021 +0.0025 +0.0032 +0.0032
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0012 +0.0016 +0.0025 +0.0026 +0.0027 +0.0027
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 0.0009 +0.0028 +0.0022 +0.0021 +0.0029 +0.0029
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0015 +0.0025 +0.0035 +0.0039 +0.0040
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0004 -0.0002 -0.0002
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0009 +0.0010 +0.0006 +0.0020 +0.0004 +0.0004
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0003 +0.0026 +0.0032 +0.0023
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0018 +0.0072 +0.0051 +0.0050 +0.0064 +0.0064
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0002 +0.0031 +0.0049 +0.0031 +0.0040 +0.0048
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0008 +0.0010 +0.0019 +0.0043 +0.0034 +0.0034
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0007 +0.0029 +0.0023 +0.0031 +0.0031
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0015 +0.0036 +0.0006 +0.0030 +0.0028 +0.0028
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0017 +0.0042 +0.0044 +0.0036 +0.0035 +0.0035
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0003 +0.0011 +0.0002 +0.0024 +0.0015 +0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0008 +0.0046 +0.0048 +0.0005 +0.0060 +0.0060
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0032 +0.0034 +0.0044 +0.0056 +0.0063 +0.0063
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0078 +0.0146 +0.0078 +0.0078
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0022 +0.0072 +0.0048 +0.0071 +0.0066
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0017 +0.0038 +0.0026 +0.0044 +0.0043 +0.0043
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0020 +0.0033 +0.0044 +0.0032 +0.0031 +0.0031
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0055 +0.0068 +0.0077 +0.0090 +0.0090
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0061 +0.0092 +0.0094 +0.0076 +0.0076
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0007 +0.0034 +0.0027 +0.0021 +0.0029 +0.0029
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0004 +0.0026 +0.0026
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0001 +0.0025 +0.0026
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0005 +0.0025 +0.0009
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0011 -0.0001 +0.0000 -0.0016 -0.0018 +0.0000
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0008 +0.0005 +0.0017 +0.0021 +0.0017 +0.0035
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0005 +0.0061 +0.0048 +0.0043 +0.0039
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0029 +0.0070 +0.0067 +0.0077 +0.0062 +0.0086
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0014 +0.0044 +0.0034 +0.0006 +0.0014 +0.0010
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0018 +0.0054 +0.0063 +0.0073 +0.0072
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0015 -0.0012 +0.0016
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0009 +0.0020 -0.0007 +0.0020 +0.0000 +0.0008
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0015 +0.0034 +0.0026 +0.0027 +0.0025
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0013 +0.0083 +0.0072 +0.0083 +0.0084 +0.0097
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0004 +0.0063 +0.0063 +0.0076 +0.0075 +0.0090
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0009 +0.0009 +0.0040 +0.0034 +0.0036 +0.0037
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0030 +0.0025 +0.0010 +0.0024 +0.0031
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 0.0014 +0.0046 +0.0037 +0.0030 +0.0059 +0.0050
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0021 +0.0016 +0.0052 +0.0045 +0.0040 +0.0039
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0005 +0.0050 +0.0015 +0.0049 +0.0042 +0.0044
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0019 +0.0034 +0.0057 +0.0015 +0.0044 +0.0042
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0014 +0.0027 +0.0028 +0.0012 -0.0001 +0.0028
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0098 +0.0126 +0.0098 +0.0184 +0.0098 +0.0098
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0052 +0.0151 +0.0118 +0.0136 +0.0140 +0.0140
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0011 +0.0025 +0.0028 -0.0025 +0.0009 +0.0013
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0014 +0.0006 -0.0013 +0.0037 +0.0047 +0.0046
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0042 +0.0084 -0.0028 +0.0023 +0.0044 +0.0045
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0029 +0.0074 +0.0074 +0.0037 +0.0084 +0.0071
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0008 +0.0051 +0.0022 +0.0017 +0.0042 +0.0049
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0024 +0.0098 +0.0097
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 0.0000 +0.0013 +0.0013
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0002 +0.0005 +0.0005
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0003 +0.0004 +0.0000 +0.0005 +0.0004 +0.0004
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0002 +0.0011 -0.0000 +0.0006 +0.0005 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0005 +0.0015 +0.0018 +0.0019 +0.0019
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0008 +0.0011 +0.0015 +0.0017 +0.0016 +0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0003 +0.0011 +0.0010 +0.0011 +0.0013 +0.0013
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0010 +0.0018 +0.0020 +0.0024 +0.0025
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0006 +0.0003 +0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0011 +0.0015 +0.0006 +0.0017 +0.0011 +0.0011
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0004 +0.0019 +0.0033 +0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0014 +0.0059 +0.0042 +0.0044 +0.0051 +0.0051
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0006 +0.0026 +0.0035 +0.0032 +0.0032 +0.0040
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0008 +0.0006 +0.0014 +0.0036 +0.0032 +0.0032
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0004 +0.0020 +0.0013 +0.0019 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0016 +0.0030 +0.0012 +0.0028 +0.0024 +0.0024
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0015 +0.0034 +0.0035 +0.0030 +0.0029 +0.0029
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0002 +0.0007 -0.0000 +0.0014 +0.0010 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0007 +0.0037 +0.0034 +0.0010 +0.0039 +0.0039
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0021 +0.0029 +0.0030 +0.0035 +0.0035 +0.0035
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0064 +0.0123 +0.0064 +0.0064
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0035 +0.0072 +0.0056 +0.0065 +0.0065
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0006 +0.0024 +0.0009 +0.0026 +0.0019 +0.0019
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0020 +0.0036 +0.0038 +0.0038 +0.0037 +0.0037
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0051 +0.0032 +0.0054 +0.0066 +0.0066
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0047 +0.0072 +0.0066 +0.0057 +0.0057
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0017 +0.0035 +0.0032 +0.0025 +0.0030 +0.0030
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0004 +0.0026 +0.0026
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0006 +0.0018 +0.0019
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0003 +0.0014 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0008 -0.0007 -0.0005 -0.0011 -0.0010 -0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0003 +0.0006 +0.0011 +0.0018 +0.0016 +0.0021
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0002 +0.0039 +0.0036 +0.0032 +0.0024
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0030 +0.0068 +0.0052 +0.0055 +0.0044 +0.0056
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0001 +0.0037 +0.0034 +0.0013 +0.0015 +0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0017 +0.0040 +0.0044 +0.0055 +0.0051
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0005 -0.0000 +0.0016
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0010 +0.0017 -0.0016 +0.0007 +0.0006 +0.0010
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0006 +0.0031 +0.0016 +0.0026 +0.0033
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0010 +0.0058 +0.0065 +0.0068 +0.0053 +0.0069
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0012 +0.0032 +0.0021 +0.0028 +0.0019 +0.0052
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0005 +0.0020 +0.0030 +0.0035 +0.0035 +0.0028
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0020 +0.0028 +0.0011 +0.0022 +0.0024
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 0.0001 +0.0033 +0.0014 +0.0015 +0.0026 +0.0031
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0012 +0.0009 +0.0034 +0.0026 +0.0021 +0.0028
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0013 +0.0026 +0.0006 +0.0025 +0.0016 +0.0020
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0000 +0.0039 +0.0041 +0.0019 +0.0030 +0.0044
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0009 +0.0023 +0.0041 +0.0013 +0.0010 +0.0038
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0117 +0.0177 +0.0199 +0.0164 +0.0117 +0.0117
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0042 +0.0142 +0.0110 +0.0097 +0.0089 +0.0090
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0003 +0.0042 +0.0038 +0.0010 +0.0030 +0.0025
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0019 +0.0000 -0.0020 +0.0024 +0.0025 +0.0048
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0021 +0.0053 -0.0046 -0.0008 +0.0017 +0.0018
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0027 +0.0047 +0.0049 +0.0018 +0.0055 +0.0046
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0000 +0.0024 +0.0017 +0.0022 +0.0028 +0.0041
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0022 +0.0097 +0.0091
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 -1211 -25606 -25799

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 148 -623 -614

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0 -0.0316 -0.0310

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 145 -699 +774

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -57 -247 -113

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1733 +0.0274 +0.0313 +0.0333 +0.0360 +0.0358
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1652 +0.0259 +0.0290 +0.0301 +0.0328 +0.0327
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1717 +0.0261 +0.0292 +0.0309 +0.0308
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1599 +0.0068 +0.0189 +0.0223 +0.0243 +0.0244
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1794 +0.0097 +0.0155 +0.0179 +0.0195 +0.0197
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1562 +0.0059 +0.0196 +0.0225 +0.0239 +0.0239
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1547 +0.0067 +0.0048 +0.0052 +0.0042 +0.0041
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5968 +0.0099 +0.0099
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2140 +0.0424 +0.0423

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0866 +0.0103 +0.0127 +0.0139 +0.0146 +0.0108
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0825 +0.0102 +0.0122 +0.0125 +0.0137 +0.0107
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0784 +0.0111 +0.0124 +0.0126 +0.0097
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0669 -0.0109 +0.0066 +0.0076 +0.0081 +0.0067
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0826 +0.0034 +0.0070 +0.0073 +0.0054 +0.0052
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0651 -0.0119 +0.0084 +0.0083 +0.0083 +0.0068
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1014 -0.0014 -0.0005 -0.0022 -0.0013 -0.0019
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5786 -0.0095 -0.0094
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1388 +0.0155 +0.0142

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0143 -0.0020 +0.0070 +0.0012 +0.0000 -0.0634
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0041 -0.0076 +0.0055 -0.0002 -0.0001 -0.0366
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0008 +0.0007 -0.0023 -0.0001 -0.0000 -0.0001
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0586 +0.0012 -0.0008 +0.0020 -0.0002 -0.0681
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0610 -0.0054 -0.0006 -0.0003 +0.0001 -0.0113
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0539 -0.0080 +0.0050 -0.0016 -0.0001 +0.0250
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1284 -0.0059 -0.0059 +0.0211 -0.0012 -0.1069
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0807 +0.0062 +0.0047 -0.0191 -0.0001 +0.0203
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1954 +0.0183 -0.0240 +0.0287 +0.0020 -0.0851
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1053 +0.0048 -0.0054 -0.0067 +0.0002 +0.0168
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0468 +0.0009 +0.0001 -0.0089 -0.0000 +0.0012
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2076 +0.0051 -0.0017 +0.0004 +0.0004 +0.0036
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1303 -0.0032 -0.0062 -0.0160 +0.0006 +0.1072
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0806 +0.0043 -0.0045 -0.0054 -0.0001 -0.0214
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0467 +0.0169 -0.0238 +0.0355 +0 -0.0498
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0157 +0.0009 +0.0076 -0.0005 +0.0006 -0.0583
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0032 -0.0089 +0.0045 +0.0004 +0.0011 -0.0390
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0176 +0.0054 -0.0044 +0.0010 +0.0033 +0.0107
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0685 +0.0013 +0.0005 -0.0055 +0.0004 -0.0526
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0611 -0.0060 -0.0005 -0.0005 -0.0005 -0.0086
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0462 -0.0084 +0.0078 -0.0007 +0.0020 +0.0132
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1545 -0.0077 -0.0028 +0.0144 -0.0004 -0.0662
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0797 +0.0048 +0.0016 -0.0170 -0.0057 +0.0297
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2463 +0.0504 -0.0481 +0.0073 +0.0089 -0.0280
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1041 +0.0031 -0.0032 -0.0081 +0.0006 +0.0276
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0443 +0.0011 -0.0008 -0.0084 -0.0000 +0.0023
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2174 +0.0036 -0.0008 +0.0016 +0.0018 +0.0124
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1160 +0.0005 -0.0096 -0.0297 +0.0070 +0.1044
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0816 +0.0056 -0.0034 -0.0033 +0.0038 -0.0306
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0554 +0.0405 -0.0089 +0.0322 +0.0276 -0.0895
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1457 +0.0343 +0.0202 -0.0086 +0.0005 -0.1626
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1292 +0.0169 -0.0058 +0.0004 +0.0004 -0.0811
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1370 +0.0117 -0.0078 +0.0011 -0.0001 -0.1237
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1456 +0.0441 -0.0007 -0.0136 +0.0007 -0.1531
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1357 +0.0164 -0.0031 -0.0002 +0.0007 -0.0843
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1360 +0.0170 -0.0063 +0.0017 +0.0006 -0.1326
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2081 +0.0445 +0.0761 -0.1281 +0.0017 -0.3645
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0426 -0.0103 +0.0134 -0.0147 -0.0018 -0.1068
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3044 -0.0030 +0.1483 +0.0078 -0.0120 -0.6411
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1877 +0.0037 +0.0045 +0.0051 +0.0002 -0.1630
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0441 +0.0676 -0.0087 -0.0168 +0.0006 -0.1082
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1866 +0.0316 +0.0062 -0.0049 +0.0001 -0.1488
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2498 -0.0093 +0.0378 -0.0706 +0.0033 -0.3303
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0598 +0.0977 -0.0155 +0.0159 +0.0001 -0.1882
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.6376 +0.0737 +0.1982 -0.0827 -0.0008 -0.6367
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0652 +0.0149 -0.0182 -0.0054 +0.1015 -0.1571
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0394 +0.0035 +0.0005 +0.0043 +0.0189 -0.0609
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0564 -0.0157 -0.0104 +0.0083 +0.0352 -0.0910
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0504 -0.0042 +0.0002 -0.0084 +0.0711 -0.1403
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0372 +0.0032 -0.0030 +0.0035 +0.0313 -0.0657
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0561 +0.0000 +0.0073 -0.0081 +0.0305 -0.0997
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0491 +0.0146 +0.0452 -0.0355 +0.0761 -0.2546
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0175 -0.0057 -0.0062 -0.0031 +0.0154 -0.0465
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0664 -0.1294 +0.1626 +0.0090 +0.0813 -0.5154
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0318 -0.0046 +0.0074 +0.0016 +0.0039 -0.0412
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0097 +0.0109 -0.0066 +0.0090 -0.0065 -0.0271
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0356 -0.0053 +0.0093 +0.0025 +0.0083 -0.0551
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0652 -0.0166 +0.0170 -0.0166 +0.0315 -0.1838
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0222 +0.0068 -0.0006 -0.0039 +0.0560 -0.1075
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1900 -0.0891 -0.0032 -0.0082 +0.0618 -0.3023
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 19.1800 -4.8900 +1.8600 -0.6900 +2.0500 +0.1500 -20.3157% +10.7390% -3.4726% +11.9673% +0.7882%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.6300 -3.1200 +0.5600 +1.2700 +0.3400 +1.5000 -24.4706% +6.1742% +15.1914% +3.6598% +18.4502%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 12.8600 +0.5500 +3.9000 +3.2000 +2.0500 +3.0700 +4.4679% +43.5268% +33.1263% +18.9639% +31.3585%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.1200 +0.8900 +0.7100 +0.1800 +0.8400 +21.0402% +16.0998% +3.6437% +19.6262%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.0400 -0.3400 +0.6600 +0.2900 +0.5000 +0.4800 -6.3197% +15.0685% +6.1053% +11.0132% +10.5263%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 6.1200 +0.6900 +1.9800 +1.6800 +1.4600 +1.8800 +12.7072% +47.8261% +37.8378% +31.3305% +44.3396%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.2500 -0.3000 +0.8300 +0.7200 +0.7900 +0.7100 -5.4054% +18.7783% +15.8940% +17.7130% +15.6388%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 16.0300 -11.6300 -3.7300 -2.2900 -3.2500 -1.8700 -42.0463% -18.8765% -12.5000% -16.8568% -10.4469%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.7000 -1.0900 +0.1100 +0.0500 +0.6100 +0.3400 -18.8256% +2.3965% +1.0753% +14.9144% +7.7982%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.0900 -1.1700 +0.6900 -0.7900 +0.0800 -18.6901% +15.6818% -13.4354% +1.5968%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.9000 +0.3800 +1.1700 +0.1000 +1.2600 +1.0700 +8.4071% +31.3673% +2.0833% +34.6154% +27.9373%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.5000 -1.2400 +0.9900 +0.5800 +1.0600 +0.7800 -21.6028% +28.2051% +14.7959% +30.8140% +20.9677%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 7.1200 +0.0500 +1.5900 +1.6100 +1.3800 +1.6500 +0.7072% +28.7523% +29.2196% +24.0418% +30.1645%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.0200 -1.5700 +0.2900 -0.1200 +0.4800 +0.1300 -20.6851% +5.0611% -1.9544% +8.6643% +2.2071%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.6400 -0.8100 +0.9700 +1.3400 +1.2300 +1.2200 -12.5581% +20.7709% +31.1628% +27.8912% +27.6018%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.9500 -1.4300 +1.0200 +1.3200 +0.3300 +0.9900 -19.3767% +20.6897% +28.5097% +5.8719% +19.9597%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.4600 -0.2800 +0.8000 +1.0700 +0.8700 -5.9072% +21.8579% +31.5634% +24.2340%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.5300 -0.7300 +0.6900 +0.7700 +0.4700 -13.8783% +17.9688% +20.4787% +11.5764%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.1400 -0.5100 +0.7100 +0.4300 +0.6900 +0.5900 -10.9677% +20.6997% +11.5903% +20.0000% +16.6197%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.4600 +0.2900 +1.1700 +0.7700 +1.1900 +0.9400 +6.9544% +35.5623% +20.8672% +36.3914% +26.7045%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.4000 -0.8800 +0.8700 +0.8000 +0.9100 +0.7000 -16.6667% +24.6459% +22.2222% +26.0745% +18.9189%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.6700 -0.8400 +0.8500 +0.5200 -0.1400 +0.6400 -15.2450% +22.2513% +12.5301% -2.9106% +15.8809%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.5500 -0.1800 +1.0900 +0.9800 +0.7800 -3.8055% +31.5029% +27.4510% +20.6897%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.7800 +0.1300 +1.1600 +1.0500 +1.0000 +1.2800 +2.7957% +32.0442% +28.1501% +26.4550% +36.5714%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.0900 -1.9500 +0.5400 +0.9900 -0.1200 -21.5708% +8.2443% +16.2295% -1.6644%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.8300 +0.3600 +0.6900 -0.7500 -0.3900 +8.0537% +16.6667% -13.4409% -7.4713%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 27.1900 +1.0100 +2.9100 +3.8579% +11.9852%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.9700 +0.0600 +0.5500 +0.4648% +4.4283%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 14.1400 +2.0800 -0.2700 +17.2471% -1.8737%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 35.3700 +7.8600 +7.0900 +28.5714% +25.0707%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 34.7700 +7.1000 +6.2700 +25.6596% +22.0000%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png