Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1343707 +247213 +36702 +31752 +50166 +50166 +22.5458% +2.8081% +2.4202% +3.8782% +3.8782%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 656873 +70551 +41111 +46163 +56992 +56992 +12.0328% +6.6764% +7.5589% +9.5006% +9.5006%
MTAC_3P_Standard 596590 623022 617574 607435 607435 661850 +65260 +38828 +44276 +54415 +54415 +10.9388% +6.2322% +7.1693% +8.9582% +8.9582%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 151761 +14213 +14922 +16201 +16201 +10.3331% +10.9048% +11.9512% +11.9512%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 172656 +17015 +16105 +16147 +17621 +17812 +10.9322% +10.2874% +10.3170% +11.3658% +11.5032%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 154166 +15657 +14781 +14874 +16281 +16379 +11.3040% +10.6044% +10.6783% +11.8077% +11.8872%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 173456 +14494 +14724 +14296 +15534 +15534 +9.1179% +9.2760% +8.9822% +9.8365% +9.8365%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1321205 +298469 +166536 +197332 +137121 +137121 +29.1834% +14.4228% +17.5582% +11.5803% +11.5803%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 52908 +12026 +11208 +10483 +10808 +10808 +29.4164% +26.8777% +24.7095% +25.6722% +25.6722%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 51522 +10453 +9120 +9499 +10370 +10370 +25.4523% +21.5084% +22.6043% +25.1993% +25.1993%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 41669 +32929 +18554 +18654 +18756 +18756 +376.7620% +80.2682% +81.0515% +81.8575% +81.8575%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 29347 +12412 +11794 +10938 +10999 +10999 +73.2920% +67.1908% +59.4166% +59.9466% +59.9466%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 117457 +17549 +14566 +18474 +18809 +18809 +17.5652% +14.1567% +18.6638% +19.0668% +19.0668%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 85911 +14813 +13183 +14466 +14785 +14785 +20.8346% +18.1264% +20.2477% +20.7871% +20.7871%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 122849 +17145 +16352 +17227 +18415 +18337 +16.2198% +15.3544% +16.3100% +17.6331% +17.5454%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 129773 +14616 +12457 +15451 +16692 +16523 +12.6922% +10.6183% +13.5153% +14.7611% +14.5898%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 19163 +8969 +8357 +7925 +7930 +7930 +87.9831% +77.3367% +70.5197% +70.5956% +70.5956%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 19457 +4650 +4024 +3416 +3758 +3758 +31.4041% +26.0740% +21.2954% +23.9378% +23.9378%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 7960 +6699 +5928 +5510 +5574 +5574 +531.2450% +291.7323% +224.8980% +233.6127% +233.6127%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 15086 +13650 +10303 +9396 +9355 +9355 +950.5571% +215.4087% +165.1318% +163.2350% +163.2350%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 31224 +9514 +9329 +8644 +8761 +8761 +43.8231% +42.6079% +38.2817% +39.0019% +39.0019%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 31918 +6058 +5775 +5658 +6293 +6293 +23.4261% +22.0900% +21.5461% +24.5580% +24.5580%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 19607 +16123 +12709 +12773 +12773 +462.7727% +184.2418% +186.9037% +186.9037%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 27368 +16669 +15894 +14486 +14479 +14479 +155.7996% +138.5219% +112.4515% +112.3361% +112.3361%
SCP_Astral_MBR 92167 93585 91884 90864 90838 108945 +16778 +15360 +17061 +18081 +18107 +18.2039% +16.4129% +18.5680% +19.8990% +19.9333%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 58673 +1974 +2880 +2782 +2782 +3.4815% +5.1619% +4.9775% +4.9775%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1909381 +133253 +134035 +7.5024% +7.5498%
EWZ_2P_MBR_Exploris_Human 836809 836809 894506 +57697 +57697 +6.8949% +6.8949%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1001750 +86826 +87801 +9.4900% +9.6068%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2292895 +214861 +214859 +10.3396% +10.3395%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2292895 +214861 +214859 +10.3396% +10.3395%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 149746 +38242 +16127 +18387 +17715 +17715 +34.2965% +12.0694% +13.9975% +13.4173% +13.4173%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 126494 +18227 +9142 +11835 +11678 +11678 +16.8352% +7.7902% +10.3219% +10.1711% +10.1711%
MTAC_3P_Standard 110265 118693 115800 116148 116148 127914 +17649 +9221 +12114 +11766 +11766 +16.0060% +7.7688% +10.4611% +10.1302% +10.1302%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56736 +7878 +7704 +7741 +7741 +16.1243% +15.7122% +15.7996% +15.7996%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63831 +9862 +8756 +7991 +7947 +8010 +18.2735% +15.8983% +14.3105% +14.2205% +14.3494%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 57702 +9081 +8037 +7413 +7242 +7287 +18.6771% +16.1824% +14.7408% +14.3520% +14.4540%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 64097 +9037 +8178 +7390 +7270 +7270 +16.4130% +14.6247% +13.0319% +12.7932% +12.7932%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 72061 +20789 +13277 +17014 +13468 +13496 +40.5465% +22.5861% +30.9081% +22.9857% +23.0445%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 20025 +5585 +5067 +4776 +4318 +4318 +38.6773% +33.8748% +31.3201% +27.4909% +27.4909%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 19318 +4835 +4253 +4402 +4248 +4246 +33.3840% +28.2310% +29.5119% +28.1885% +28.1714%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 16757 +8017 +7381 +7368 +7393 +7372 +91.7277% +78.7223% +78.4748% +78.9513% +78.5509%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 16764 +7866 +7505 +6980 +6954 +6954 +88.4019% +81.0563% +71.3410% +70.8869% +70.8869%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 42310 +7445 +6013 +7968 +7885 +7885 +21.3538% +16.5661% +23.2019% +22.9049% +22.9049%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 31297 +6648 +5831 +6178 +6074 +6074 +26.9707% +22.8972% +24.5949% +24.0812% +24.0812%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 44778 +8090 +7102 +7129 +7357 +7319 +22.0508% +18.8502% +18.9354% +19.6601% +19.5387%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 46650 +6494 +5105 +6607 +6757 +6704 +16.1719% +12.2879% +16.4998% +16.9378% +16.7827%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7819 +4153 +3870 +3610 +3573 +3573 +113.2842% +97.9995% +85.7686% +84.1498% +84.1498%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7573 +2274 +1962 +1718 +1507 +1506 +42.9138% +34.9670% +29.3424% +24.8434% +24.8228%
SCP_Astral_250pg_3ms 675 721 908 879 879 3700 +3025 +2979 +2792 +2821 +2821 +448.1481% +413.1761% +307.4890% +320.9329% +320.9329%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6395 +4959 +4657 +4250 +4232 +4230 +345.3343% +267.9517% +198.1352% +195.6542% +195.3811%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12412 +4618 +4440 +4160 +4006 +4004 +59.2507% +55.6949% +50.4120% +47.6564% +47.6213%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12125 +2967 +2783 +2754 +2711 +2710 +32.3979% +29.7902% +29.3885% +28.7975% +28.7839%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8560 +6714 +5960 +5974 +5971 +363.7053% +229.2308% +231.0131% +230.6296%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 10993 +7119 +6838 +6219 +6188 +6189 +183.7636% +164.5728% +130.2681% +128.7825% +128.8301%
SCP_Astral_MBR 24110 24991 24570 24544 24527 29905 +5795 +4914 +5335 +5361 +5378 +24.0357% +19.6631% +21.7135% +21.8424% +21.9269%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 58673 +1974 +2880 +2782 +2782 +3.4815% +5.1619% +4.9775% +4.9775%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 61564 +6293 +6417 +11.3857% +11.6362%
EWZ_2P_MBR_Exploris_Human 48465 48473 53635 +5170 +5162 +10.6675% +10.6492%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 57707 +6461 +6530 +12.6078% +12.7596%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 78851 +5573 +5574 +7.6053% +7.6068%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 78851 +5573 +5574 +7.6053% +7.6068%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91770 +3850 -1118 -2212 -1671 -2516 +4.3790% -1.2036% -2.3536% -1.7883% -2.6685%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67610 +3837 +3636 +3999 +4595 +1775 +6.0167% +5.6836% +6.2866% +7.2919% +2.6961%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68161 +3844 +3697 +3942 +4776 +2194 +5.9766% +5.7350% +6.1384% +7.5349% +3.3259%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12923 +856 +953 +983 +684 +7.0937% +7.9616% +8.2328% +5.5887%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13156 +724 +685 +794 +828 +496 +5.8237% +5.4927% +6.4229% +6.7164% +3.9179%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12658 +650 +611 +698 +690 +478 +5.4131% +5.0718% +5.8361% +5.7654% +3.9245%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13263 +702 +798 +786 +853 +489 +5.5887% +6.4019% +6.2996% +6.8735% +3.8281%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 158045 +11821 +4511 +4055 +2218 +759 +8.0842% +2.9381% +2.6333% +1.4234% +0.4826%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11403 +2240 +1875 +1818 +2069 +1381 +24.4461% +19.6788% +18.9671% +22.1663% +13.7797%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11354 +2056 +1593 +1942 +1801 +1365 +22.1123% +16.3200% +20.6332% +18.8527% +13.6650%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9327 +6877 +3243 +3080 +3211 +2978 +280.6939% +53.3037% +49.3037% +52.5016% +46.9050%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6491 +1788 +1903 +1533 +1568 +1542 +38.0183% +41.4778% +30.9197% +31.8505% +31.1578%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17516 +1326 +1236 +1491 +1461 +980 +8.1902% +7.5921% +9.3042% +9.1000% +5.9265%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15108 +1509 +1267 +1420 +1437 +1124 +11.0964% +9.1540% +10.3741% +10.5113% +8.0378%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17708 +1456 +1432 +1591 +1783 +1250 +8.9589% +8.7982% +9.8716% +11.1962% +7.5951%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18289 +1272 +1111 +1376 +1544 +940 +7.4749% +6.4676% +8.1358% +9.2207% +5.4182%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5601 +1954 +1688 +1737 +2062 +1787 +53.5783% +43.1383% +44.9534% +58.2650% +46.8537%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5600 +1300 +997 +803 +623 +431 +30.2326% +21.6598% +16.7396% +12.5176% +8.3382%
SCP_Astral_250pg_3ms 576 22 936 741 736 2695 +2119 +2673 +1759 +1954 +1959 +367.8819% +12150% +187.9274% +263.6977% +266.1685%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4366 +3729 +2286 +2337 +2320 +2298 +585.4003% +109.9038% +115.1799% +113.3920% +111.1219%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7790 +1545 +1444 +1774 +1663 +1571 +24.7398% +22.7545% +29.4880% +27.1422% +25.2613%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7708 +986 +979 +696 +685 +366 +14.6683% +14.5490% +9.9258% +9.7537% +4.9850%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5338 +4356 +2973 +3161 +3102 +443.5845% +125.7082% +145.1998% +138.7299%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7255 +3547 +3248 +3210 +3337 +3152 +95.6580% +81.0581% +79.3572% +85.1710% +76.8218%
SCP_Astral_MBR 20165 20129 20074 19793 19898 20961 +796 +832 +887 +1168 +1063 +3.9474% +4.1333% +4.4187% +5.9011% +5.3422%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4913 +228 +213 +281 +174 +4.8666% +4.5319% +6.0665% +3.6717%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 249071 +3812 +1649 +1.5543% +0.6665%
EWZ_2P_MBR_Exploris_Human 115447 117345 115568 +121 -1777 +0.1048% -1.5143%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 133505 +4537 +2799 +3.5179% +2.1414%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 191462 +13288 +7919 +7.4579% +4.3145%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 191462 +13288 +7919 +7.4579% +4.3145%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8374 +529 +199 +219 +171 +125 +6.7431% +2.4343% +2.6855% +2.0846% +1.5153%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12209 +848 +715 +858 +871 +411 +7.4641% +6.2206% +7.5588% +7.6821% +3.4836%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12335 +862 +775 +858 +939 +503 +7.5133% +6.7042% +7.4758% +8.2397% +4.2512%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4447 +319 +355 +347 +264 +7.7277% +8.6755% +8.4634% +6.3113%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4504 +289 +256 +286 +290 +167 +6.8565% +6.0264% +6.7805% +6.8818% +3.8506%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4357 +282 +223 +267 +260 +172 +6.9202% +5.3943% +6.5281% +6.3461% +4.1099%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4526 +277 +289 +282 +295 +172 +6.5192% +6.8209% +6.6447% +6.9723% +3.9504%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7918 +663 +336 +578 +439 +381 +9.1385% +4.4315% +7.8747% +5.8698% +5.0551%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4114 +869 +725 +703 +796 +553 +26.7797% +21.3927% +20.6098% +23.9904% +15.5293%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4049 +795 +616 +758 +615 +557 +24.4315% +17.9435% +23.0325% +17.9091% +15.9507%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3483 +1033 +1087 +1033 +1086 +1049 +42.1633% +45.3673% +42.1633% +45.3066% +43.0978%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3482 +974 +1046 +848 +840 +899 +38.8357% +42.9392% +32.1944% +31.7941% +34.8045%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6064 +485 +408 +560 +518 +410 +8.6933% +7.2136% +10.1744% +9.3401% +7.2515%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5292 +571 +454 +509 +481 +448 +12.0949% +9.3840% +10.6419% +9.9979% +9.2486%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6179 +568 +524 +583 +626 +466 +10.1230% +9.2661% +10.4182% +11.2732% +8.1568%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6349 +503 +400 +506 +544 +384 +8.6042% +6.7238% +8.6599% +9.3712% +6.4376%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2118 +826 +694 +712 +830 +759 +63.9319% +48.7360% +50.6401% +64.4410% +55.8499%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2042 +474 +382 +284 +169 +172 +30.2296% +23.0120% +16.1547% +9.0230% +9.1979%
SCP_Astral_250pg_3ms 307 8 350 283 281 1125 +818 +1117 +775 +842 +844 +266.4495% +13962.5000% +221.4286% +297.5265% +300.3559%
SCP_Astral_250pg_6ms 637 756 751 766 767 1713 +1076 +957 +962 +947 +946 +168.9168% +126.5873% +128.0959% +123.6292% +123.3377%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2821 +614 +546 +652 +591 +604 +27.8206% +24% +30.0599% +26.5022% +27.2440%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2798 +395 +410 +321 +259 +200 +16.4378% +17.1692% +12.9592% +10.2009% +7.6982%
SCP_Astral_500pg_3ms 525 902 828 835 2066 +1541 +1164 +1238 +1231 +293.5238% +129.0466% +149.5169% +147.4251%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2697 +1379 +1250 +1211 +1262 +1229 +104.6282% +86.3856% +81.4939% +87.9443% +83.7193%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5088 +380 +368 +376 +373 +372 +8.0714% +7.7966% +7.9796% +7.9109% +7.8880%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4913 +228 +213 +281 +174 +4.8666% +4.5319% +6.0665% +3.6717%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7201 +160 +95 +2.2724% +1.3369%
EWZ_2P_MBR_Exploris_Human 6167 6284 6169 +2 -115 +0.0324% -1.8300%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7217 +330 +254 +4.7916% +3.6479%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6223 +419 +268 +7.2192% +4.5004%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6223 +419 +268 +7.2192% +4.5004%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91757 -2522
MTAC_3P_Alternating 65832 67605 +1773
MTAC_3P_Standard 65967 68156 +2189
MTAC_Yeast_Alternating_3min 12239 12916 +677
MTAC_Yeast_Alternating_5min 12660 13155 +495
MTAC_Yeast_Standard_3min 12180 12655 +475
MTAC_Yeast_Standard_5min 12772 13261 +489
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 158043 +758
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11401 +1379
SCP_Astral_1000pg_24ms 9989 11354 +1365
SCP_Astral_1000pg_3ms 6349 9325 +2976
SCP_Astral_1000pg_6ms 4949 6489 +1540
SCP_Astral_10ng_12ms 16536 17515 +979
SCP_Astral_10ng_24ms 13982 15108 +1126
SCP_Astral_10ng_3ms 16458 17705 +1247
SCP_Astral_10ng_6ms 17349 18285 +936
SCP_Astral_250pg_12ms 3814 5601 +1787
SCP_Astral_250pg_24ms 5169 5600 +431
SCP_Astral_250pg_3ms 736 2695 +1959
SCP_Astral_250pg_6ms 2066 4366 +2300
SCP_Astral_500pg_12ms 6219 7790 +1571
SCP_Astral_500pg_24ms 7342 7708 +366
SCP_Astral_500pg_3ms 2234 5335 +3101
SCP_Astral_500pg_6ms 4103 7255 +3152
SCP_Astral_MBR 19891 20961 +1070
Seer_Astral_45 242898
Seer_Astral_single 4739 4913 +174
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 249066 +1644
EWZ_2P_MBR_Exploris_Human 117340 115566 -1774
EWZ_2P_MBR_Exploris_YeastHuman 130702 133500 +2798
MacCoss_Eclipse_Normalization_noNorm 183540 191462 +7922
MacCoss_Eclipse_Normalization_yesNorm 183540 191462 +7922

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0015 -0.0003 -0.0003
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0002 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0003 +0.0002 -0.0002 +0.0007 +0.0005 +0.0005
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0007 +0.0007 -0.0012 -0.0001 +0.0000 -0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0017 -0.0002 +0.0002 +0.0009 +0.0009
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0002 +0.0006 +0.0014 +0.0016 +0.0016 +0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0000 +0.0019 +0.0013 +0.0012 +0.0020 +0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0006 +0.0004 +0.0014 +0.0018 +0.0019
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0002 -0.0004 -0.0004
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0001 +0.0003 -0.0001 +0.0013 -0.0003 -0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0001 +0.0024 +0.0031 +0.0021
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0020 +0.0074 +0.0053 +0.0052 +0.0066 +0.0066
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0009 +0.0039 +0.0057 +0.0038 +0.0047 +0.0055
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0021 +0.0024 +0.0032 +0.0057 +0.0047 +0.0047
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0002 +0.0020 +0.0015 +0.0022 +0.0022
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0003 +0.0017 -0.0012 +0.0012 +0.0010 +0.0010
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0002 +0.0022 +0.0024 +0.0016 +0.0015 +0.0015
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0005 +0.0003 -0.0006 +0.0016 +0.0007 +0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0005 +0.0044 +0.0046 +0.0003 +0.0058 +0.0058
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0021 +0.0023 +0.0033 +0.0045 +0.0052 +0.0052
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 -0.0004 +0.0065 -0.0004 -0.0004
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0023 +0.0073 +0.0049 +0.0072 +0.0067
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0006 +0.0016 +0.0004 +0.0022 +0.0020 +0.0020
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0021 +0.0034 +0.0045 +0.0033 +0.0032 +0.0032
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0020 +0.0033 +0.0043 +0.0055 +0.0055
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0016 +0.0047 +0.0048 +0.0030 +0.0030
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0003 +0.0023 +0.0016 +0.0011 +0.0019 +0.0019
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0010 +0.0031 +0.0031
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0019 +0.0007 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0015 +0.0015 -0.0001
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0031 -0.0021 -0.0021 -0.0037 -0.0039 -0.0021
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0037 -0.0024 -0.0012 -0.0008 -0.0012 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0023 +0.0042 +0.0029 +0.0025 +0.0021
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0045 +0.0087 +0.0084 +0.0094 +0.0079 +0.0102
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0009 +0.0049 +0.0038 +0.0010 +0.0018 +0.0015
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0007 +0.0029 +0.0039 +0.0049 +0.0048
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0022 -0.0019 +0.0009
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0021 +0.0008 -0.0019 +0.0007 -0.0012 -0.0004
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0020 +0.0029 +0.0022 +0.0023 +0.0021
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0032 +0.0038 +0.0027 +0.0038 +0.0039 +0.0052
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0003 +0.0062 +0.0062 +0.0075 +0.0075 +0.0090
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0011 +0.0028 +0.0060 +0.0054 +0.0056 +0.0057
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0028 +0.0026 +0.0012 +0.0026 +0.0032
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0023 +0.0009 -0.0000 -0.0007 +0.0022 +0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0007 +0.0030 +0.0067 +0.0060 +0.0054 +0.0054
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0044 +0.0011 -0.0024 +0.0010 +0.0003 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0017 +0.0071 +0.0094 +0.0052 +0.0081 +0.0079
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0023 +0.0018 +0.0018 +0.0002 -0.0011 +0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0069 +0.0096 +0.0069 +0.0154 +0.0069 +0.0069
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0027 +0.0126 +0.0094 +0.0112 +0.0115 +0.0115
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0029 +0.0007 +0.0011 -0.0043 -0.0008 -0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0001 +0.0021 +0.0002 +0.0052 +0.0062 +0.0061
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0033 +0.0075 -0.0037 +0.0013 +0.0034 +0.0035
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0022 +0.0067 +0.0068 +0.0030 +0.0078 +0.0065
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0004 +0.0064 +0.0034 +0.0030 +0.0054 +0.0061
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0031 +0.0105 +0.0104
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0008 +0.0004 +0.0004
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0000 +0.0003 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0001 +0.0002 -0.0002 +0.0003 +0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0000 +0.0009 -0.0001 +0.0004 +0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0007 +0.0003 +0.0006 +0.0007 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0007 +0.0011 +0.0015 +0.0017 +0.0015 +0.0015
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0001 +0.0010 +0.0009 +0.0009 +0.0012 +0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0000 +0.0008 +0.0010 +0.0015 +0.0015
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0006 +0.0003 +0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0005 +0.0010 +0.0001 +0.0012 +0.0006 +0.0006
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0003 +0.0018 +0.0033 +0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0011 +0.0057 +0.0040 +0.0042 +0.0048 +0.0048
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0020 +0.0041 +0.0050 +0.0046 +0.0047 +0.0054
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0019 +0.0017 +0.0025 +0.0046 +0.0043 +0.0043
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0005 +0.0022 +0.0015 +0.0021 +0.0021
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 -0.0003 +0.0010 -0.0007 +0.0009 +0.0005 +0.0005
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0002 +0.0021 +0.0022 +0.0018 +0.0016 +0.0016
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0002 +0.0003 -0.0004 +0.0010 +0.0007 +0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0012 +0.0042 +0.0038 +0.0014 +0.0043 +0.0043
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0025 +0.0032 +0.0033 +0.0038 +0.0039 +0.0039
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0022 +0.0081 +0.0022 +0.0022
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0015 +0.0051 +0.0036 +0.0045 +0.0045
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0005 +0.0014 -0.0001 +0.0015 +0.0009 +0.0009
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0021 +0.0037 +0.0039 +0.0039 +0.0038 +0.0038
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0025 +0.0006 +0.0029 +0.0041 +0.0041
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0030 +0.0055 +0.0049 +0.0040 +0.0040
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0010 +0.0027 +0.0025 +0.0018 +0.0023 +0.0023
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0010 +0.0031 +0.0031
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0002 +0.0014 +0.0015
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0013 +0.0003 -0.0007
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0012 -0.0011 -0.0010 -0.0015 -0.0015 -0.0007
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0014 -0.0006 -0.0001 +0.0006 +0.0004 +0.0009
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0006 +0.0030 +0.0027 +0.0023 +0.0015
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0040 +0.0077 +0.0061 +0.0064 +0.0053 +0.0065
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0004 +0.0034 +0.0031 +0.0010 +0.0011 +0.0014
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0002 +0.0021 +0.0025 +0.0036 +0.0032
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0008 -0.0004 +0.0013
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0010 +0.0016 -0.0017 +0.0007 +0.0006 +0.0009
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0013 +0.0024 +0.0010 +0.0019 +0.0026
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0008 +0.0040 +0.0047 +0.0049 +0.0035 +0.0051
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0013 +0.0057 +0.0046 +0.0054 +0.0044 +0.0078
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0017 +0.0042 +0.0052 +0.0057 +0.0057 +0.0050
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0022 +0.0025 +0.0009 +0.0020 +0.0022
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0021 +0.0011 -0.0007 -0.0006 +0.0005 +0.0010
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0002 +0.0019 +0.0044 +0.0035 +0.0030 +0.0037
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0030 +0.0009 -0.0011 +0.0008 -0.0000 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0024 +0.0062 +0.0065 +0.0043 +0.0054 +0.0068
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0008 +0.0005 +0.0024 -0.0005 -0.0008 +0.0020
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0027 +0.0087 +0.0109 +0.0074 +0.0027 +0.0027
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0011 +0.0111 +0.0079 +0.0066 +0.0058 +0.0058
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0019 +0.0020 +0.0016 -0.0012 +0.0008 +0.0003
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0003 +0.0022 +0.0002 +0.0046 +0.0048 +0.0070
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0002 +0.0034 -0.0064 -0.0026 -0.0001 -0.0000
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0025 +0.0045 +0.0047 +0.0016 +0.0053 +0.0043
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0001 +0.0025 +0.0019 +0.0023 +0.0029 +0.0042
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0039 +0.0113 +0.0108
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 13125 -11270 -11463

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 461 -310 -301

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0351 +0.0035 +0.0041

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 -2 -846 +627

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -15 -205 -71

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 13 +4 +1 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1683 +0.0224 +0.0262 +0.0282 +0.0309 +0.0307
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1622 +0.0229 +0.0259 +0.0270 +0.0298 +0.0297
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1629 +0.0173 +0.0204 +0.0221 +0.0220
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1547 +0.0016 +0.0137 +0.0171 +0.0191 +0.0192
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1744 +0.0046 +0.0104 +0.0128 +0.0144 +0.0146
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1497 -0.0006 +0.0131 +0.0160 +0.0174 +0.0174
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1539 +0.0059 +0.0040 +0.0044 +0.0034 +0.0033
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5969 +0.0100 +0.0100
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2114 +0.0398 +0.0397

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0854 +0.0091 +0.0115 +0.0127 +0.0134 +0.0097
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0823 +0.0100 +0.0120 +0.0123 +0.0135 +0.0105
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0747 +0.0074 +0.0087 +0.0089 +0.0060
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0674 -0.0104 +0.0071 +0.0081 +0.0085 +0.0072
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0784 -0.0008 +0.0028 +0.0031 +0.0012 +0.0010
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0646 -0.0125 +0.0079 +0.0077 +0.0077 +0.0062
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1012 -0.0017 -0.0008 -0.0025 -0.0015 -0.0021
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5784 -0.0098 -0.0096
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1355 +0.0122 +0.0109

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0098 -0.0020 +0.0070 +0.0012 +0.0000 -0.0679
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0038 -0.0076 +0.0055 -0.0002 -0.0001 -0.0369
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0010 +0.0007 -0.0023 -0.0001 -0.0000 +0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0600 +0.0012 -0.0008 +0.0020 -0.0002 -0.0666
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0612 -0.0054 -0.0006 -0.0003 +0.0001 -0.0111
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0532 -0.0080 +0.0050 -0.0016 -0.0001 +0.0243
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1276 -0.0059 -0.0059 +0.0211 -0.0012 -0.1077
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0813 +0.0062 +0.0047 -0.0191 -0.0001 +0.0210
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1947 +0.0183 -0.0240 +0.0287 +0.0020 -0.0858
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1054 +0.0048 -0.0054 -0.0067 +0.0002 +0.0169
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0469 +0.0009 +0.0001 -0.0089 -0.0000 +0.0013
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2065 +0.0051 -0.0017 +0.0004 +0.0004 +0.0026
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1368 -0.0032 -0.0062 -0.0160 +0.0006 +0.1137
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0796 +0.0043 -0.0045 -0.0054 -0.0001 -0.0223
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0479 +0.0169 -0.0238 +0.0355 +0 -0.0486
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0152 +0.0009 +0.0076 -0.0005 +0.0006 -0.0587
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0029 -0.0089 +0.0045 +0.0004 +0.0011 -0.0393
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0096 +0.0054 -0.0044 +0.0010 +0.0033 +0.0028
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0633 +0.0013 +0.0005 -0.0055 +0.0004 -0.0577
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0617 -0.0060 -0.0005 -0.0005 -0.0005 -0.0080
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0481 -0.0084 +0.0078 -0.0007 +0.0020 +0.0151
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1587 -0.0077 -0.0028 +0.0144 -0.0004 -0.0620
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0770 +0.0048 +0.0016 -0.0170 -0.0057 +0.0270
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2288 +0.0504 -0.0481 +0.0073 +0.0089 -0.0455
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1031 +0.0031 -0.0032 -0.0081 +0.0006 +0.0266
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0440 +0.0011 -0.0008 -0.0084 -0.0000 +0.0020
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2186 +0.0036 -0.0008 +0.0016 +0.0018 +0.0135
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1158 +0.0005 -0.0096 -0.0297 +0.0070 +0.1043
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0808 +0.0056 -0.0034 -0.0033 +0.0038 -0.0314
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0443 +0.0405 -0.0089 +0.0322 +0.0276 -0.1005
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1383 +0.0343 +0.0202 -0.0086 +0.0005 -0.1701
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1237 +0.0169 -0.0058 +0.0004 +0.0004 -0.0866
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1256 +0.0117 -0.0078 +0.0011 -0.0001 -0.1351
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1475 +0.0441 -0.0007 -0.0136 +0.0007 -0.1512
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1323 +0.0164 -0.0031 -0.0002 +0.0007 -0.0877
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1385 +0.0170 -0.0063 +0.0017 +0.0006 -0.1301
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2171 +0.0445 +0.0761 -0.1281 +0.0017 -0.3555
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0437 -0.0103 +0.0134 -0.0147 -0.0018 -0.1057
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2805 -0.0030 +0.1483 +0.0078 -0.0120 -0.6649
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1839 +0.0037 +0.0045 +0.0051 +0.0002 -0.1668
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0426 +0.0676 -0.0087 -0.0168 +0.0006 -0.1097
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1843 +0.0316 +0.0062 -0.0049 +0.0001 -0.1511
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2279 -0.0093 +0.0378 -0.0706 +0.0033 -0.3522
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0654 +0.0977 -0.0155 +0.0159 +0.0001 -0.1825
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5189 +0.0737 +0.1982 -0.0827 -0.0008 -0.7554
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0761 +0.0149 -0.0182 -0.0054 +0.1015 -0.1461
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0379 +0.0035 +0.0005 +0.0043 +0.0189 -0.0624
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0525 -0.0157 -0.0104 +0.0083 +0.0352 -0.0949
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0559 -0.0042 +0.0002 -0.0084 +0.0711 -0.1348
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0377 +0.0032 -0.0030 +0.0035 +0.0313 -0.0652
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0510 +0.0000 +0.0073 -0.0081 +0.0305 -0.1048
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0553 +0.0146 +0.0452 -0.0355 +0.0761 -0.2484
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0166 -0.0057 -0.0062 -0.0031 +0.0154 -0.0474
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0635 -0.1294 +0.1626 +0.0090 +0.0813 -0.5183
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0322 -0.0046 +0.0074 +0.0016 +0.0039 -0.0408
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0105 +0.0109 -0.0066 +0.0090 -0.0065 -0.0263
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0399 -0.0053 +0.0093 +0.0025 +0.0083 -0.0508
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0815 -0.0166 +0.0170 -0.0166 +0.0315 -0.1675
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0231 +0.0068 -0.0006 -0.0039 +0.0560 -0.1067
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.2070 -0.0891 -0.0032 -0.0082 +0.0618 -0.2853
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 18.9800 -5.0900 +1.6600 -0.8900 +1.8500 -0.0500 -21.1467% +9.5843% -4.4791% +10.7998% -0.2627%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 8.4300 -4.3200 -0.6400 +0.0700 -0.8600 +0.3000 -33.8824% -7.0562% +0.8373% -9.2573% +3.6900%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.5400 -2.7700 +0.5800 -0.1200 -1.2700 -0.2500 -22.5020% +6.4732% -1.2422% -11.7484% -2.5536%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.6900 +0.4600 +0.2800 -0.2500 +0.4100 +10.8747% +6.3492% -5.0607% +9.5794%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.9800 -0.4000 +0.6000 +0.2300 +0.4400 +0.4200 -7.4349% +13.6986% +4.8421% +9.6916% +9.2105%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.7000 -0.7300 +0.5600 +0.2600 +0.0400 +0.4600 -13.4438% +13.5266% +5.8559% +0.8584% +10.8491%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.0300 -0.5200 +0.6100 +0.5000 +0.5700 +0.4900 -9.3694% +13.8009% +11.0375% +12.7803% +10.7930%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 15.1500 -12.5100 -4.6100 -3.1700 -4.1300 -2.7500 -45.2278% -23.3300% -17.3035% -21.4212% -15.3631%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.7600 -1.0300 +0.1700 +0.1100 +0.6700 +0.4000 -17.7893% +3.7037% +2.3656% +16.3814% +9.1743%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.0300 -1.2300 +0.6300 -0.8500 +0.0200 -19.6486% +14.3182% -14.4558% +0.3992%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.6700 +0.1500 +0.9400 -0.1300 +1.0300 +0.8400 +3.3186% +25.2011% -2.7083% +28.2967% +21.9321%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.0600 -1.6800 +0.5500 +0.1400 +0.6200 +0.3400 -29.2683% +15.6695% +3.5714% +18.0233% +9.1398%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 5.9100 -1.1600 +0.3800 +0.4000 +0.1700 +0.4400 -16.4074% +6.8716% +7.2595% +2.9617% +8.0439%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.0300 -1.5600 +0.3000 -0.1100 +0.4900 +0.1400 -20.5534% +5.2356% -1.7915% +8.8448% +2.3769%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.5100 -0.9400 +0.8400 +1.2100 +1.1000 +1.0900 -14.5736% +17.9872% +28.1395% +24.9433% +24.6606%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.1200 -1.2600 +1.1900 +1.4900 +0.5000 +1.1600 -17.0732% +24.1379% +32.1814% +8.8968% +23.3871%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.5500 -0.1900 +0.8900 +1.1600 +0.9600 -4.0084% +24.3169% +34.2183% +26.7409%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.3900 -0.8700 +0.5500 +0.6300 +0.3300 -16.5399% +14.3229% +16.7553% +8.1281%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4 -0.6500 +0.5700 +0.2900 +0.5500 +0.4500 -13.9785% +16.6181% +7.8167% +15.9420% +12.6761%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.4800 +0.3100 +1.1900 +0.7900 +1.2100 +0.9600 +7.4341% +36.1702% +21.4092% +37.0031% +27.2727%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.6500 -0.6300 +1.1200 +1.0500 +1.1600 +0.9500 -11.9318% +31.7280% +29.1667% +33.2378% +25.6757%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.6500 -0.8600 +0.8300 +0.5000 -0.1600 +0.6200 -15.6080% +21.7277% +12.0482% -3.3264% +15.3846%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.4700 -0.2600 +1.0100 +0.9000 +0.7000 -5.4968% +29.1908% +25.2101% +18.5676%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.7700 +0.1200 +1.1500 +1.0400 +0.9900 +1.2700 +2.5806% +31.7680% +27.8820% +26.1905% +36.2857%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.1400 -1.9000 +0.5900 +1.0400 -0.0700 -21.0177% +9.0076% +17.0492% -0.9709%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.8800 +0.4100 +0.7400 -0.7000 -0.3400 +9.1723% +17.8744% -12.5448% -6.5134%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 21.2000 -4.9800 -3.0800 -19.0222% -12.6853%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 13.3900 +0.4800 +0.9700 +3.7180% +7.8100%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 13.3500 +1.2900 -1.0600 +10.6965% -7.3560%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 31.3900 +3.8800 +3.1100 +14.1040% +10.9972%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 31.0400 +3.3700 +2.5400 +12.1793% +8.9123%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png