Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1349897 +253403 +42892 +37942 +56356 +56356 +23.1103% +3.2817% +2.8920% +4.3567% +4.3567%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 680385 +94063 +64623 +69675 +80504 +80504 +16.0429% +10.4948% +11.4089% +13.4200% +13.4200%
MTAC_3P_Standard 596590 623022 617574 607435 607435 689153 +92563 +66131 +71579 +81718 +81718 +15.5153% +10.6146% +11.5904% +13.4530% +13.4530%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 154545 +16997 +17706 +18985 +18985 +12.3571% +12.9393% +14.0049% +14.0049%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 173102 +17461 +16551 +16593 +18067 +18258 +11.2188% +10.5723% +10.6019% +11.6535% +11.7912%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 156346 +17837 +16961 +17054 +18461 +18559 +12.8779% +12.1685% +12.2433% +13.3887% +13.4693%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 175323 +16361 +16591 +16163 +17401 +17401 +10.2924% +10.4522% +10.1552% +11.0187% +11.0187%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1358057 +335321 +203388 +234184 +173973 +173973 +32.7867% +17.6144% +20.8372% +14.6926% +14.6926%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 56446 +15564 +14746 +14021 +14346 +14346 +38.0705% +35.3621% +33.0489% +34.0760% +34.0760%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 54817 +13748 +12415 +12794 +13665 +13665 +33.4754% +29.2793% +30.4452% +33.2062% +33.2062%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 44902 +36162 +21787 +21887 +21989 +21989 +413.7529% +94.2548% +95.0988% +95.9674% +95.9674%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 30804 +13869 +13251 +12395 +12456 +12456 +81.8955% +75.4914% +67.3312% +67.8875% +67.8875%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 123147 +23239 +20256 +24164 +24499 +24499 +23.2604% +19.6869% +24.4123% +24.8348% +24.8348%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 89702 +18604 +16974 +18257 +18576 +18576 +26.1667% +23.3390% +25.5539% +26.1170% +26.1170%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 130666 +24962 +24169 +25044 +26232 +26154 +23.6150% +22.6945% +23.7110% +25.1183% +25.0249%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 138098 +22941 +20782 +23776 +25017 +24848 +19.9215% +17.7145% +20.7974% +22.1231% +21.9408%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 20578 +10384 +9772 +9340 +9345 +9345 +101.8638% +90.4312% +83.1109% +83.1924% +83.1924%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 22022 +7215 +6589 +5981 +6323 +6323 +48.7270% +42.6942% +37.2857% +40.2765% +40.2765%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8807 +7546 +6775 +6357 +6421 +6421 +598.4140% +333.4154% +259.4694% +269.1115% +269.1115%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 16017 +14581 +11234 +10327 +10286 +10286 +1015.3900% +234.8735% +181.4938% +179.4800% +179.4800%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 33246 +11536 +11351 +10666 +10783 +10783 +53.1368% +51.8429% +47.2365% +48.0034% +48.0034%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 34696 +8836 +8553 +8436 +9071 +9071 +34.1686% +32.7162% +32.1249% +35.3990% +35.3990%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20315 +16831 +13417 +13481 +13481 +483.0941% +194.5057% +197.2637% +197.2637%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 29400 +18701 +17926 +16518 +16511 +16511 +174.7920% +156.2315% +128.2254% +128.1015% +128.1015%
SCP_Astral_MBR 92167 93585 91884 90864 90838 117649 +25482 +24064 +25765 +26785 +26811 +27.6476% +25.7135% +28.0408% +29.4781% +29.5152%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61230 +4531 +5437 +5339 +5339 +7.9913% +9.7450% +9.5525% +9.5525%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1945463 +169335 +170117 +9.5339% +9.5822%
EWZ_2P_MBR_Exploris_Human 836809 836809 917876 +81067 +81067 +9.6876% +9.6876%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1021592 +106668 +107643 +11.6587% +11.7778%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2297894 +219860 +219858 +10.5802% +10.5801%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2297894 +219860 +219858 +10.5802% +10.5801%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 154249 +42745 +20630 +22890 +22218 +22218 +38.3349% +15.4394% +17.4255% +16.8279% +16.8279%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 134654 +26387 +17302 +19995 +19838 +19838 +24.3722% +14.7437% +17.4387% +17.2781% +17.2781%
MTAC_3P_Standard 110265 118693 115800 116148 116148 136548 +26283 +17855 +20748 +20400 +20400 +23.8362% +15.0430% +17.9171% +17.5638% +17.5638%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56946 +8088 +7914 +7951 +7951 +16.5541% +16.1405% +16.2282% +16.2282%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63306 +9337 +8231 +7466 +7422 +7485 +17.3007% +14.9451% +13.3703% +13.2811% +13.4089%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 58042 +9421 +8377 +7753 +7582 +7627 +19.3764% +16.8670% +15.4169% +15.0258% +15.1284%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 63841 +8781 +7922 +7134 +7014 +7014 +15.9481% +14.1669% +12.5805% +12.3427% +12.3427%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75345 +24073 +16561 +20298 +16752 +16780 +46.9516% +28.1726% +36.8739% +28.5904% +28.6519%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21364 +6924 +6406 +6115 +5657 +5657 +47.9501% +42.8266% +40.1010% +36.0158% +36.0158%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20217 +5734 +5152 +5301 +5147 +5145 +39.5912% +34.1985% +35.5390% +34.1539% +34.1361%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18067 +9327 +8691 +8678 +8703 +8682 +106.7162% +92.6941% +92.4273% +92.9411% +92.5093%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17187 +8289 +7928 +7403 +7377 +7377 +93.1558% +85.6248% +75.6643% +75.1988% +75.1988%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 43778 +8913 +7481 +9436 +9353 +9353 +25.5643% +20.6105% +27.4766% +27.1692% +27.1692%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32347 +7698 +6881 +7228 +7124 +7124 +31.2305% +27.0203% +28.7750% +28.2441% +28.2441%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 47838 +11150 +10162 +10189 +10417 +10379 +30.3914% +26.9721% +27.0631% +27.8373% +27.7076%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 49260 +9104 +7715 +9217 +9367 +9314 +22.6716% +18.5702% +23.0178% +23.4803% +23.3165%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8203 +4537 +4254 +3994 +3957 +3957 +123.7589% +107.7235% +94.8919% +93.1936% +93.1936%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8524 +3225 +2913 +2669 +2458 +2457 +60.8605% +51.9159% +45.5850% +40.5209% +40.4978%
SCP_Astral_250pg_3ms 675 721 908 879 879 4151 +3476 +3430 +3243 +3272 +3272 +514.9630% +475.7282% +357.1586% +372.2412% +372.2412%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6683 +5247 +4945 +4538 +4520 +4518 +365.3900% +284.5224% +211.5618% +208.9690% +208.6836%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12878 +5084 +4906 +4626 +4472 +4470 +65.2297% +61.5404% +56.0591% +53.2001% +53.1637%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12931 +3773 +3589 +3560 +3517 +3516 +41.1990% +38.4179% +37.9895% +37.3593% +37.3447%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8786 +6940 +6186 +6200 +6197 +375.9480% +237.9231% +239.7525% +239.3588%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 11654 +7780 +7499 +6880 +6849 +6850 +200.8260% +180.4813% +144.1140% +142.5390% +142.5895%
SCP_Astral_MBR 24110 24991 24570 24544 24527 32514 +8404 +7523 +7944 +7970 +7987 +34.8569% +30.1028% +32.3321% +32.4723% +32.5641%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61230 +4531 +5437 +5339 +5339 +7.9913% +9.7450% +9.5525% +9.5525%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64141 +8870 +8994 +16.0482% +16.3091%
EWZ_2P_MBR_Exploris_Human 48465 48473 55644 +7179 +7171 +14.8128% +14.7938%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 59684 +8438 +8507 +16.4657% +16.6227%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80770 +7492 +7493 +10.2241% +10.2256%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80770 +7492 +7493 +10.2241% +10.2256%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92308 +4388 -580 -1674 -1133 -1978 +4.9909% -0.6244% -1.7812% -1.2125% -2.0979%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 68444 +4671 +4470 +4833 +5429 +2609 +7.3244% +6.9872% +7.5977% +8.6154% +3.9629%
MTAC_3P_Standard 64317 64464 64219 63385 65967 69161 +4844 +4697 +4942 +5776 +3194 +7.5314% +7.2862% +7.6955% +9.1126% +4.8418%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12869 +802 +899 +929 +630 +6.6462% +7.5104% +7.7806% +5.1475%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13133 +701 +662 +771 +805 +473 +5.6387% +5.3083% +6.2369% +6.5299% +3.7362%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12820 +812 +773 +860 +852 +640 +6.7622% +6.4165% +7.1906% +7.1190% +5.2545%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13274 +713 +809 +797 +864 +500 +5.6763% +6.4902% +6.3878% +6.9621% +3.9142%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 159718 +13494 +6184 +5728 +3891 +2432 +9.2283% +4.0278% +3.7197% +2.4970% +1.5462%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12182 +3019 +2654 +2597 +2848 +2160 +32.9477% +27.8547% +27.0944% +30.5121% +21.5526%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11781 +2483 +2020 +2369 +2228 +1792 +26.7047% +20.6946% +25.1700% +23.3225% +17.9397%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9889 +7439 +3805 +3642 +3773 +3540 +303.6327% +62.5411% +58.3000% +61.6906% +55.7568%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6681 +1978 +2093 +1723 +1758 +1732 +42.0583% +45.6190% +34.7519% +35.7099% +34.9970%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18076 +1886 +1796 +2051 +2021 +1540 +11.6492% +11.0319% +12.7988% +12.5880% +9.3130%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15223 +1624 +1382 +1535 +1552 +1239 +11.9421% +9.9848% +11.2142% +11.3525% +8.8601%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18256 +2004 +1980 +2139 +2331 +1798 +12.3308% +12.1652% +13.2717% +14.6374% +10.9248%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19119 +2102 +1941 +2206 +2374 +1770 +12.3524% +11.2993% +13.0432% +14.1774% +10.2023%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5937 +2290 +2024 +2073 +2398 +2123 +62.7913% +51.7250% +53.6491% +67.7593% +55.6633%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6248 +1948 +1645 +1451 +1271 +1079 +45.3023% +35.7376% +30.2481% +25.5375% +20.8744%
SCP_Astral_250pg_3ms 576 22 936 741 736 2352 +1776 +2330 +1416 +1611 +1616 +308.3333% +10590.9091% +151.2821% +217.4089% +219.5652%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4472 +3835 +2392 +2443 +2426 +2404 +602.0408% +115.0000% +120.4041% +118.5728% +116.2476%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8013 +1768 +1667 +1997 +1886 +1794 +28.3106% +26.2685% +33.1948% +30.7818% +28.8471%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8376 +1654 +1647 +1364 +1353 +1034 +24.6058% +24.4761% +19.4524% +19.2653% +14.0834%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5461 +4479 +3096 +3284 +3225 +456.1100% +130.9091% +150.8498% +144.2308%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7193 +3485 +3186 +3148 +3275 +3090 +93.9860% +79.5109% +77.8245% +83.5886% +75.3107%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21619 +1454 +1490 +1545 +1826 +1721 +7.2105% +7.4023% +7.6965% +9.2255% +8.6491%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5092 +407 +392 +460 +353 +8.6873% +8.3404% +9.9309% +7.4488%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 252706 +7447 +5284 +3.0364% +2.1356%
EWZ_2P_MBR_Exploris_Human 115447 117345 118232 +2785 +887 +2.4124% +0.7559%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 134574 +5606 +3868 +4.3468% +2.9593%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 192865 +14691 +9322 +8.2453% +5.0789%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 192865 +14691 +9322 +8.2453% +5.0789%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8521 +676 +346 +366 +318 +272 +8.6170% +4.2324% +4.4880% +3.8766% +3.2974%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12575 +1214 +1081 +1224 +1237 +777 +10.6857% +9.4049% +10.7832% +10.9102% +6.5859%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12680 +1207 +1120 +1203 +1284 +848 +10.5204% +9.6886% +10.4818% +11.2671% +7.1670%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4421 +293 +329 +321 +238 +7.0979% +8.0401% +7.8293% +5.6897%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4508 +293 +260 +290 +294 +171 +6.9514% +6.1205% +6.8753% +6.9767% +3.9428%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4404 +329 +270 +314 +307 +219 +8.0736% +6.5312% +7.6773% +7.4933% +5.2330%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4548 +299 +311 +304 +317 +194 +7.0369% +7.3401% +7.1631% +7.4923% +4.4557%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8174 +919 +592 +834 +695 +637 +12.6671% +7.8080% +11.3624% +9.2927% +8.4516%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4380 +1135 +991 +969 +1062 +819 +34.9769% +29.2417% +28.4081% +32.0072% +22.9992%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4209 +955 +776 +918 +775 +717 +29.3485% +22.6041% +27.8943% +22.5684% +20.5326%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3707 +1257 +1311 +1257 +1310 +1273 +51.3061% +54.7162% +51.3061% +54.6516% +52.3007%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3537 +1029 +1101 +903 +895 +954 +41.0287% +45.1970% +34.2825% +33.8759% +36.9338%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6265 +686 +609 +761 +719 +611 +12.2961% +10.7673% +13.8263% +12.9643% +10.8065%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5316 +595 +478 +533 +505 +472 +12.6033% +9.8801% +11.1436% +10.4968% +9.7440%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6423 +812 +768 +827 +870 +710 +14.4716% +13.5809% +14.7784% +15.6672% +12.4278%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6645 +799 +696 +802 +840 +680 +13.6675% +11.6994% +13.7258% +14.4703% +11.3998%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2227 +935 +803 +821 +939 +868 +72.3684% +56.3904% +58.3926% +72.9037% +63.8705%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2272 +704 +612 +514 +399 +402 +44.8980% +36.8675% +29.2378% +21.3027% +21.4973%
SCP_Astral_250pg_3ms 307 8 350 283 281 1001 +694 +993 +651 +718 +720 +226.0586% +12412.5000% +186% +253.7102% +256.2278%
SCP_Astral_250pg_6ms 637 756 751 766 767 1701 +1064 +945 +950 +935 +934 +167.0330% +125% +126.4980% +122.0627% +121.7731%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2909 +702 +634 +740 +679 +692 +31.8079% +27.8681% +34.1171% +30.4484% +31.2134%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3051 +648 +663 +574 +512 +453 +26.9663% +27.7638% +23.1732% +20.1654% +17.4365%
SCP_Astral_500pg_3ms 525 902 828 835 2134 +1609 +1232 +1306 +1299 +306.4762% +136.5854% +157.7295% +155.5689%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2693 +1375 +1246 +1207 +1258 +1225 +104.3247% +86.1092% +81.2248% +87.6655% +83.4469%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5253 +545 +533 +541 +538 +537 +11.5760% +11.2924% +11.4813% +11.4104% +11.3868%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5092 +407 +392 +460 +353 +8.6873% +8.3404% +9.9309% +7.4488%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7419 +378 +313 +5.3686% +4.4047%
EWZ_2P_MBR_Exploris_Human 6167 6284 6385 +218 +101 +3.5349% +1.6073%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7379 +492 +416 +7.1439% +5.9744%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6385 +581 +430 +10.0103% +7.2208%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6385 +581 +430 +10.0103% +7.2208%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92294 -1985
MTAC_3P_Alternating 65832 68440 +2608
MTAC_3P_Standard 65967 69145 +3178
MTAC_Yeast_Alternating_3min 12239 12867 +628
MTAC_Yeast_Alternating_5min 12660 13130 +470
MTAC_Yeast_Standard_3min 12180 12817 +637
MTAC_Yeast_Standard_5min 12772 13273 +501
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 159717 +2432
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12176 +2154
SCP_Astral_1000pg_24ms 9989 11779 +1790
SCP_Astral_1000pg_3ms 6349 9886 +3537
SCP_Astral_1000pg_6ms 4949 6677 +1728
SCP_Astral_10ng_12ms 16536 18076 +1540
SCP_Astral_10ng_24ms 13982 15223 +1241
SCP_Astral_10ng_3ms 16458 18250 +1792
SCP_Astral_10ng_6ms 17349 19119 +1770
SCP_Astral_250pg_12ms 3814 5937 +2123
SCP_Astral_250pg_24ms 5169 6248 +1079
SCP_Astral_250pg_3ms 736 2350 +1614
SCP_Astral_250pg_6ms 2066 4472 +2406
SCP_Astral_500pg_12ms 6219 8013 +1794
SCP_Astral_500pg_24ms 7342 8376 +1034
SCP_Astral_500pg_3ms 2234 5458 +3224
SCP_Astral_500pg_6ms 4103 7193 +3090
SCP_Astral_MBR 19891 21619 +1728
Seer_Astral_45 242898
Seer_Astral_single 4739 5092 +353
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 252693 +5271
EWZ_2P_MBR_Exploris_Human 117340 118212 +872
EWZ_2P_MBR_Exploris_YeastHuman 130702 134564 +3862
MacCoss_Eclipse_Normalization_noNorm 183540 192861 +9321
MacCoss_Eclipse_Normalization_yesNorm 183540 192861 +9321

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0014 -0.0003 -0.0003
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0007 -0.0000 -0.0000
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0011 -0.0006 -0.0010 -0.0001 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0007 +0.0006 -0.0012 -0.0002 -0.0000 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0011 +0.0005 +0.0008 +0.0015 +0.0015
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0019 -0.0015 -0.0006 -0.0005 -0.0004 -0.0004
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0000 +0.0019 +0.0014 +0.0012 +0.0020 +0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0005 +0.0005 +0.0014 +0.0019 +0.0020
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0001 -0.0006 -0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0000 +0.0002 -0.0002 +0.0011 -0.0005 -0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0018 +0.0005 +0.0012 +0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0010 +0.0064 +0.0043 +0.0041 +0.0056 +0.0056
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 -0.0004 +0.0026 +0.0043 +0.0025 +0.0034 +0.0042
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0001 +0.0003 +0.0012 +0.0037 +0.0027 +0.0027
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0001 +0.0021 +0.0015 +0.0023 +0.0023
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0007 +0.0028 -0.0002 +0.0022 +0.0020 +0.0020
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0009 +0.0015 +0.0018 +0.0009 +0.0009 +0.0009
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0009 -0.0001 -0.0010 +0.0013 +0.0003 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0007 +0.0031 +0.0033 -0.0010 +0.0045 +0.0045
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0021 +0.0023 +0.0033 +0.0045 +0.0052 +0.0052
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0018 +0.0087 +0.0018 +0.0018
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0021 +0.0072 +0.0048 +0.0071 +0.0066
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0008 +0.0029 +0.0018 +0.0035 +0.0034 +0.0034
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 -0.0003 +0.0010 +0.0021 +0.0009 +0.0008 +0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0030 +0.0043 +0.0053 +0.0065 +0.0065
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0039 +0.0070 +0.0072 +0.0054 +0.0054
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0001 +0.0028 +0.0021 +0.0016 +0.0023 +0.0023
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0012 +0.0014 +0.0015
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0018 +0.0011 -0.0004
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0027 -0.0017 -0.0016 -0.0033 -0.0035 -0.0017
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0020 -0.0008 +0.0005 +0.0009 +0.0005 +0.0023
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0023 +0.0043 +0.0030 +0.0025 +0.0021
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0004 +0.0037 +0.0034 +0.0044 +0.0029 +0.0053
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0009 +0.0049 +0.0038 +0.0010 +0.0018 +0.0015
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0013 +0.0023 +0.0032 +0.0042 +0.0041
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0051 -0.0049 -0.0021
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0026 +0.0003 -0.0025 +0.0002 -0.0018 -0.0009
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0042 +0.0007 -0.0000 +0.0000 -0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0003 +0.0073 +0.0061 +0.0073 +0.0073 +0.0086
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0030 +0.0029 +0.0029 +0.0042 +0.0042 +0.0057
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0030 -0.0013 +0.0019 +0.0013 +0.0015 +0.0016
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0052 +0.0002 -0.0013 +0.0001 +0.0008
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0020 +0.0013 +0.0003 -0.0003 +0.0025 +0.0016
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0011 +0.0025 +0.0062 +0.0055 +0.0049 +0.0049
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0032 +0.0023 -0.0012 +0.0022 +0.0015 +0.0017
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0011 +0.0042 +0.0066 +0.0024 +0.0053 +0.0050
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0031 +0.0011 +0.0011 -0.0005 -0.0018 +0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0024 +0.0051 +0.0024 +0.0109 +0.0024 +0.0024
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0046 +0.0145 +0.0112 +0.0130 +0.0134 +0.0134
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0004 +0.0040 +0.0043 -0.0011 +0.0024 +0.0028
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0050 -0.0030 -0.0049 +0.0002 +0.0012 +0.0011
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0005 +0.0036 -0.0076 -0.0025 -0.0004 -0.0003
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 -0.0013 +0.0032 +0.0032 -0.0005 +0.0043 +0.0030
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0004 +0.0063 +0.0034 +0.0029 +0.0054 +0.0061
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 -0.0000 +0.0074 +0.0073
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0011 +0.0001 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0005 -0.0002 -0.0002
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0008 -0.0007 -0.0011 -0.0006 -0.0007 -0.0007
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0006 +0.0002 -0.0008 -0.0003 -0.0003 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0009 +0.0001 +0.0004 +0.0005 +0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0013 -0.0009 -0.0006 -0.0003 -0.0005 -0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0004 +0.0005 +0.0004 +0.0004 +0.0007 +0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 -0.0008 +0.0001 +0.0003 +0.0007 +0.0007
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0002 -0.0001 -0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0002 +0.0006 -0.0003 +0.0008 +0.0002 +0.0002
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0013 +0.0002 +0.0016 +0.0006
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0006 +0.0052 +0.0034 +0.0037 +0.0043 +0.0043
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 -0.0004 +0.0016 +0.0025 +0.0022 +0.0022 +0.0030
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 -0.0000 -0.0002 +0.0006 +0.0027 +0.0024 +0.0024
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0002 +0.0014 +0.0008 +0.0014 +0.0014
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0003 +0.0017 -0.0000 +0.0015 +0.0011 +0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 -0.0008 +0.0012 +0.0012 +0.0008 +0.0007 +0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0008 -0.0003 -0.0010 +0.0004 +0.0000 +0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 -0.0001 +0.0029 +0.0026 +0.0002 +0.0031 +0.0031
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0020 +0.0027 +0.0028 +0.0033 +0.0034 +0.0034
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0018 +0.0077 +0.0018 +0.0018
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0016 +0.0053 +0.0037 +0.0046 +0.0046
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0011 +0.0029 +0.0014 +0.0031 +0.0024 +0.0024
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 -0.0007 +0.0009 +0.0011 +0.0011 +0.0010 +0.0010
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0028 +0.0010 +0.0032 +0.0044 +0.0044
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0023 +0.0049 +0.0042 +0.0033 +0.0033
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0005 +0.0022 +0.0020 +0.0013 +0.0018 +0.0018
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0001 +0.0012 +0.0014
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0013 +0.0004 -0.0007
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0012 -0.0011 -0.0010 -0.0015 -0.0015 -0.0007
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0010 -0.0001 +0.0004 +0.0011 +0.0009 +0.0014
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0010 +0.0026 +0.0023 +0.0019 +0.0012
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0002 +0.0040 +0.0024 +0.0027 +0.0016 +0.0027
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 0.0001 +0.0039 +0.0036 +0.0014 +0.0016 +0.0019
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0010 +0.0013 +0.0017 +0.0027 +0.0024
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0015 -0.0010 +0.0006
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0016 +0.0011 -0.0022 +0.0001 +0.0000 +0.0004
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0031 +0.0006 -0.0009 +0.0001 +0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0006 +0.0054 +0.0061 +0.0064 +0.0049 +0.0065
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0032 +0.0012 +0.0001 +0.0009 -0.0001 +0.0033
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0031 -0.0006 +0.0004 +0.0009 +0.0009 +0.0002
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0043 +0.0005 -0.0012 -0.0001 +0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0009 +0.0023 +0.0005 +0.0005 +0.0016 +0.0021
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0008 +0.0013 +0.0038 +0.0029 +0.0024 +0.0031
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0025 +0.0014 -0.0006 +0.0013 +0.0004 +0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0016 +0.0023 +0.0025 +0.0003 +0.0014 +0.0029
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0013 +0.0000 +0.0018 -0.0010 -0.0013 +0.0015
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0046 +0.0106 +0.0127 +0.0092 +0.0046 +0.0046
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0052 +0.0152 +0.0120 +0.0107 +0.0099 +0.0099
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0014 +0.0053 +0.0049 +0.0021 +0.0041 +0.0036
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0034 -0.0015 -0.0035 +0.0009 +0.0010 +0.0033
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0001 +0.0033 -0.0066 -0.0028 -0.0003 -0.0002
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 -0.0014 +0.0005 +0.0008 -0.0024 +0.0014 +0.0004
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0010 +0.0033 +0.0027 +0.0032 +0.0038 +0.0051
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 -0.0000 +0.0074 +0.0069
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 5995 -18400 -18593

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 346 -425 -416

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0577 +0.0261 +0.0267

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 -100 -944 +529

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -59 -249 -115

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 13 +4 +1 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1708 +0.0249 +0.0287 +0.0307 +0.0334 +0.0333
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1641 +0.0248 +0.0278 +0.0289 +0.0317 +0.0316
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1691 +0.0235 +0.0267 +0.0283 +0.0282
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1578 +0.0048 +0.0169 +0.0202 +0.0222 +0.0224
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1761 +0.0063 +0.0121 +0.0145 +0.0161 +0.0163
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1549 +0.0046 +0.0183 +0.0212 +0.0226 +0.0225
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1551 +0.0071 +0.0052 +0.0056 +0.0046 +0.0045
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5970 +0.0101 +0.0101
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2133 +0.0417 +0.0416

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0858 +0.0095 +0.0119 +0.0131 +0.0138 +0.0101
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0826 +0.0103 +0.0124 +0.0127 +0.0138 +0.0108
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0763 +0.0090 +0.0103 +0.0105 +0.0076
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0675 -0.0103 +0.0072 +0.0082 +0.0087 +0.0074
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0792 -0.0000 +0.0036 +0.0039 +0.0020 +0.0017
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0646 -0.0124 +0.0079 +0.0078 +0.0078 +0.0063
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1013 -0.0015 -0.0006 -0.0023 -0.0014 -0.0020
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5791 -0.0090 -0.0089
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1410 +0.0177 +0.0163

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0135 -0.0020 +0.0070 +0.0012 +0.0000 -0.0641
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0046 -0.0076 +0.0055 -0.0002 -0.0001 -0.0362
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0002 +0.0007 -0.0023 -0.0001 -0.0000 -0.0007
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0613 +0.0012 -0.0008 +0.0020 -0.0002 -0.0654
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0606 -0.0054 -0.0006 -0.0003 +0.0001 -0.0118
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0542 -0.0080 +0.0050 -0.0016 -0.0001 +0.0253
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1282 -0.0059 -0.0059 +0.0211 -0.0012 -0.1071
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0803 +0.0062 +0.0047 -0.0191 -0.0001 +0.0200
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1908 +0.0183 -0.0240 +0.0287 +0.0020 -0.0897
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1056 +0.0048 -0.0054 -0.0067 +0.0002 +0.0171
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0470 +0.0009 +0.0001 -0.0089 -0.0000 +0.0014
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2084 +0.0051 -0.0017 +0.0004 +0.0004 +0.0044
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1356 -0.0032 -0.0062 -0.0160 +0.0006 +0.1125
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0800 +0.0043 -0.0045 -0.0054 -0.0001 -0.0219
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0469 +0.0169 -0.0238 +0.0355 +0 -0.0495
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0127 +0.0009 +0.0076 -0.0005 +0.0006 -0.0613
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0047 -0.0089 +0.0045 +0.0004 +0.0011 -0.0374
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0158 +0.0054 -0.0044 +0.0010 +0.0033 +0.0089
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0596 +0.0013 +0.0005 -0.0055 +0.0004 -0.0615
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0623 -0.0060 -0.0005 -0.0005 -0.0005 -0.0073
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0437 -0.0084 +0.0078 -0.0007 +0.0020 +0.0107
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1623 -0.0077 -0.0028 +0.0144 -0.0004 -0.0584
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0762 +0.0048 +0.0016 -0.0170 -0.0057 +0.0262
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2453 +0.0504 -0.0481 +0.0073 +0.0089 -0.0290
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1036 +0.0031 -0.0032 -0.0081 +0.0006 +0.0271
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0445 +0.0011 -0.0008 -0.0084 -0.0000 +0.0025
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2201 +0.0036 -0.0008 +0.0016 +0.0018 +0.0150
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1140 +0.0005 -0.0096 -0.0297 +0.0070 +0.1024
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0829 +0.0056 -0.0034 -0.0033 +0.0038 -0.0294
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0492 +0.0405 -0.0089 +0.0322 +0.0276 -0.0956
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1457 +0.0343 +0.0202 -0.0086 +0.0005 -0.1627
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1275 +0.0169 -0.0058 +0.0004 +0.0004 -0.0828
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1418 +0.0117 -0.0078 +0.0011 -0.0001 -0.1189
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1444 +0.0441 -0.0007 -0.0136 +0.0007 -0.1543
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1339 +0.0164 -0.0031 -0.0002 +0.0007 -0.0861
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1394 +0.0170 -0.0063 +0.0017 +0.0006 -0.1293
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2066 +0.0445 +0.0761 -0.1281 +0.0017 -0.3660
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0417 -0.0103 +0.0134 -0.0147 -0.0018 -0.1078
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3346 -0.0030 +0.1483 +0.0078 -0.0120 -0.6109
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1854 +0.0037 +0.0045 +0.0051 +0.0002 -0.1653
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0437 +0.0676 -0.0087 -0.0168 +0.0006 -0.1086
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1864 +0.0316 +0.0062 -0.0049 +0.0001 -0.1489
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2473 -0.0093 +0.0378 -0.0706 +0.0033 -0.3328
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0761 +0.0977 -0.0155 +0.0159 +0.0001 -0.1718
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.6003 +0.0737 +0.1982 -0.0827 -0.0008 -0.6741
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0591 +0.0149 -0.0182 -0.0054 +0.1015 -0.1631
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0373 +0.0035 +0.0005 +0.0043 +0.0189 -0.0631
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0528 -0.0157 -0.0104 +0.0083 +0.0352 -0.0946
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0563 -0.0042 +0.0002 -0.0084 +0.0711 -0.1344
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0397 +0.0032 -0.0030 +0.0035 +0.0313 -0.0632
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0576 +0.0000 +0.0073 -0.0081 +0.0305 -0.0982
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0472 +0.0146 +0.0452 -0.0355 +0.0761 -0.2566
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0180 -0.0057 -0.0062 -0.0031 +0.0154 -0.0459
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0614 -0.1294 +0.1626 +0.0090 +0.0813 -0.5204
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0307 -0.0046 +0.0074 +0.0016 +0.0039 -0.0423
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0099 +0.0109 -0.0066 +0.0090 -0.0065 -0.0269
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0370 -0.0053 +0.0093 +0.0025 +0.0083 -0.0536
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0707 -0.0166 +0.0170 -0.0166 +0.0315 -0.1782
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0212 +0.0068 -0.0006 -0.0039 +0.0560 -0.1086
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1888 -0.0891 -0.0032 -0.0082 +0.0618 -0.3035
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 22.9100 -1.1600 +5.5900 +3.0400 +5.7800 +3.8800 -4.8193% +32.2748% +15.2994% +33.7420% +20.3889%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 11.4600 -1.2900 +2.3900 +3.1000 +2.1700 +3.3300 -10.1176% +26.3506% +37.0813% +23.3584% +40.9594%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 11.2500 -1.0600 +2.2900 +1.5900 +0.4400 +1.4600 -8.6109% +25.5580% +16.4596% +4.0703% +14.9132%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.2300 +1 +0.8200 +0.2900 +0.9500 +23.6407% +18.5941% +5.8704% +22.1963%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.4200 +0.0400 +1.0400 +0.6700 +0.8800 +0.8600 +0.7435% +23.7443% +14.1053% +19.3833% +18.8596%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 7.2800 +1.8500 +3.1400 +2.8400 +2.6200 +3.0400 +34.0700% +75.8454% +63.9640% +56.2232% +71.6981%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.5600 +0.0100 +1.1400 +1.0300 +1.1000 +1.0200 +0.1802% +25.7919% +22.7373% +24.6637% +22.4670%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 15.9700 -11.6900 -3.7900 -2.3500 -3.3100 -1.9300 -42.2632% -19.1802% -12.8275% -17.1680% -10.7821%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.5200 -0.2700 +0.9300 +0.8700 +1.4300 +1.1600 -4.6632% +20.2614% +18.7097% +34.9633% +26.6055%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 6.2700 +0.0100 +1.8700 +0.3900 +1.2600 +0.1597% +42.5000% +6.6327% +25.1497%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.7300 +1.2100 +2.0000 +0.9300 +2.0900 +1.9000 +26.7699% +53.6193% +19.3750% +57.4176% +49.6084%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.6800 -1.0600 +1.1700 +0.7600 +1.2400 +0.9600 -18.4669% +33.3333% +19.3878% +36.0465% +25.8065%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 7.3900 +0.3200 +1.8600 +1.8800 +1.6500 +1.9200 +4.5262% +33.6347% +34.1198% +28.7456% +35.1005%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.9600 -0.6300 +1.2300 +0.8200 +1.4200 +1.0700 -8.3004% +21.4660% +13.3550% +25.6318% +18.1664%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.7300 -0.7200 +1.0600 +1.4300 +1.3200 +1.3100 -11.1628% +22.6981% +33.2558% +29.9320% +29.6380%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.8900 -0.4900 +1.9600 +2.2600 +1.2700 +1.9300 -6.6396% +39.7566% +48.8121% +22.5979% +38.9113%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 5.0500 +0.3100 +1.3900 +1.6600 +1.4600 +6.5401% +37.9781% +48.9676% +40.6685%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.7500 -0.5100 +0.9100 +0.9900 +0.6900 -9.6958% +23.6979% +26.3298% +16.9951%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.6000 -0.0500 +1.1700 +0.8900 +1.1500 +1.0500 -1.0753% +34.1108% +23.9892% +33.3333% +29.5775%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 5.5200 +1.3500 +2.2300 +1.8300 +2.2500 +2.0000 +32.3741% +67.7812% +49.5935% +68.8073% +56.8182%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 5.0100 -0.2700 +1.4800 +1.4100 +1.5200 +1.3100 -5.1136% +41.9263% +39.1667% +43.5530% +35.4054%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.1800 -0.3300 +1.3600 +1.0300 +0.3700 +1.1500 -5.9891% +35.6021% +24.8193% +7.6923% +28.5360%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.6900 -0.0400 +1.2300 +1.1200 +0.9200 -0.8457% +35.5491% +31.3725% +24.4032%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.7800 +1.1300 +2.1600 +2.0500 +2.0000 +2.2800 +24.3011% +59.6685% +54.9598% +52.9101% +65.1429%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.7900 -1.2500 +1.2400 +1.6900 +0.5800 -13.8274% +18.9313% +27.7049% +8.0444%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.7000 +1.2300 +1.5600 +0.1200 +0.4800 +27.5168% +37.6812% +2.1505% +9.1954%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 25.7100 -0.4700 +1.4300 -1.7953% +5.8896%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 14.5300 +1.6200 +2.1100 +12.5484% +16.9887%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 15.9200 +3.8600 +1.5100 +32.0066% +10.4788%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 38.3900 +10.8800 +10.1100 +39.5493% +35.7496%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 39.1300 +11.4600 +10.6300 +41.4167% +37.2982%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png