Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1367330 +270836 +60325 +55375 +73789 +73789 +24.7002% +4.6155% +4.2208% +5.7044% +5.7044%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 695081 +108759 +79319 +84371 +95200 +95200 +18.5494% +12.8814% +13.8152% +15.8698% +15.8698%
MTAC_3P_Standard 596590 623022 617574 607435 607435 699011 +102421 +75989 +81437 +91576 +91576 +17.1677% +12.1968% +13.1866% +15.0759% +15.0759%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 162201 +24653 +25362 +26641 +26641 +17.9232% +18.5342% +19.6526% +19.6526%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 182262 +26621 +25711 +25753 +27227 +27418 +17.1041% +16.4234% +16.4546% +17.5618% +17.7069%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 162412 +23903 +23027 +23120 +24527 +24625 +17.2574% +16.5204% +16.5982% +17.7880% +17.8718%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 181886 +22924 +23154 +22726 +23964 +23964 +14.4211% +14.5869% +14.2787% +15.1746% +15.1746%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1352797 +330061 +198128 +228924 +168713 +168713 +32.2724% +17.1589% +20.3692% +14.2484% +14.2484%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 57727 +16845 +16027 +15302 +15627 +15627 +41.2040% +38.4341% +36.0684% +37.1188% +37.1188%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 55354 +14285 +12952 +13331 +14202 +14202 +34.7829% +30.5457% +31.7231% +34.5111% +34.5111%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 45746 +37006 +22631 +22731 +22833 +22833 +423.4096% +97.9061% +98.7660% +99.6509% +99.6509%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31796 +14861 +14243 +13387 +13448 +13448 +87.7532% +81.1428% +72.7199% +73.2941% +73.2941%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 123953 +24045 +21062 +24970 +25305 +25305 +24.0671% +20.4702% +25.2266% +25.6518% +25.6518%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 91456 +20358 +18728 +20011 +20330 +20330 +28.6337% +25.7507% +28.0090% +28.5831% +28.5831%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 133689 +27985 +27192 +28067 +29255 +29177 +26.4749% +25.5331% +26.5731% +28.0129% +27.9174%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 140361 +25204 +23045 +26039 +27280 +27111 +21.8866% +19.6435% +22.7769% +24.1243% +23.9391%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 21036 +10842 +10230 +9798 +9803 +9803 +106.3567% +94.6696% +87.1863% +87.2697% +87.2697%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 21962 +7155 +6529 +5921 +6263 +6263 +48.3217% +42.3054% +36.9117% +39.8943% +39.8943%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 9371 +8110 +7339 +6921 +6985 +6985 +643.1404% +361.1713% +282.4898% +292.7494% +292.7494%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 16815 +15379 +12032 +11125 +11084 +11084 +1070.9610% +251.5576% +195.5185% +193.4043% +193.4043%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 34297 +12587 +12402 +11717 +11834 +11834 +57.9779% +56.6431% +51.8911% +52.6822% +52.6822%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 35187 +9327 +9044 +8927 +9562 +9562 +36.0673% +34.5943% +33.9947% +37.3151% +37.3151%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20922 +17438 +14024 +14088 +14088 +500.5166% +203.3053% +206.1457% +206.1457%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 30245 +19546 +18771 +17363 +17356 +17356 +182.6900% +163.5960% +134.7850% +134.6575% +134.6575%
SCP_Astral_MBR 92167 93585 91884 90864 90838 117801 +25634 +24216 +25917 +26937 +26963 +27.8126% +25.8759% +28.2062% +29.6454% +29.6825%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61859 +5160 +6066 +5968 +5968 +9.1007% +10.8723% +10.6779% +10.6779%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1957837 +181709 +182491 +10.2306% +10.2792%
EWZ_2P_MBR_Exploris_Human 836809 836809 923178 +86369 +86369 +10.3212% +10.3212%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1030110 +115186 +116161 +12.5897% +12.7098%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2335009 +256975 +256973 +12.3663% +12.3661%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2335009 +256975 +256973 +12.3663% +12.3661%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 154872 +43368 +21253 +23513 +22841 +22841 +38.8937% +15.9057% +17.8998% +17.2997% +17.2997%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 137032 +28765 +19680 +22373 +22216 +22216 +26.5686% +16.7701% +19.5126% +19.3492% +19.3492%
MTAC_3P_Standard 110265 118693 115800 116148 116148 139389 +29124 +20696 +23589 +23241 +23241 +26.4127% +17.4366% +20.3705% +20.0098% +20.0098%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 59968 +11110 +10936 +10973 +10973 +22.7394% +22.3038% +22.3962% +22.3962%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 66702 +12733 +11627 +10862 +10818 +10881 +23.5932% +21.1112% +19.4520% +19.3580% +19.4927%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 60734 +12113 +11069 +10445 +10274 +10319 +24.9131% +22.2873% +20.7699% +20.3607% +20.4681%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66770 +11710 +10851 +10063 +9943 +9943 +21.2677% +19.4049% +17.7456% +17.4970% +17.4970%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75267 +23995 +16483 +20220 +16674 +16702 +46.7994% +28.0399% +36.7322% +28.4573% +28.5187%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21853 +7413 +6895 +6604 +6146 +6146 +51.3366% +46.0957% +43.3078% +39.1291% +39.1291%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20439 +5956 +5374 +5523 +5369 +5367 +41.1241% +35.6721% +37.0274% +35.6271% +35.6091%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18466 +9726 +9090 +9077 +9102 +9081 +111.2815% +96.9497% +96.6770% +97.2021% +96.7608%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17740 +8842 +8481 +7956 +7930 +7930 +99.3706% +91.5974% +81.3164% +80.8359% +80.8359%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 44511 +9646 +8214 +10169 +10086 +10086 +27.6667% +22.6300% +29.6110% +29.2985% +29.2985%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 33111 +8462 +7645 +7992 +7888 +7888 +34.3300% +30.0204% +31.8166% +31.2730% +31.2730%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 49036 +12348 +11360 +11387 +11615 +11577 +33.6568% +30.1518% +30.2452% +31.0387% +30.9058%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50625 +10469 +9080 +10582 +10732 +10679 +26.0708% +21.8558% +26.4266% +26.9020% +26.7336%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8312 +4646 +4363 +4103 +4066 +4066 +126.7321% +110.4837% +97.4816% +95.7607% +95.7607%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8549 +3250 +2938 +2694 +2483 +2482 +61.3323% +52.3614% +46.0120% +40.9331% +40.9098%
SCP_Astral_250pg_3ms 675 721 908 879 879 4486 +3811 +3765 +3578 +3607 +3607 +564.5926% +522.1914% +394.0529% +410.3527% +410.3527%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 7066 +5630 +5328 +4921 +4903 +4901 +392.0613% +306.5593% +229.4172% +226.6759% +226.3741%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13372 +5578 +5400 +5120 +4966 +4964 +71.5679% +67.7371% +62.0456% +59.0768% +59.0390%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 13186 +4028 +3844 +3815 +3772 +3771 +43.9834% +41.1475% +40.7107% +40.0680% +40.0531%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 9062 +7216 +6462 +6476 +6473 +390.8992% +248.5385% +250.4254% +250.0193%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12085 +8211 +7930 +7311 +7280 +7281 +211.9515% +190.8544% +153.1420% +151.5088% +151.5612%
SCP_Astral_MBR 24110 24991 24570 24544 24527 32912 +8802 +7921 +8342 +8368 +8385 +36.5077% +31.6954% +33.9520% +34.0939% +34.1868%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61859 +5160 +6066 +5968 +5968 +9.1007% +10.8723% +10.6779% +10.6779%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64507 +9236 +9360 +16.7104% +16.9728%
EWZ_2P_MBR_Exploris_Human 48465 48473 56245 +7780 +7772 +16.0528% +16.0337%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 60341 +9095 +9164 +17.7477% +17.9065%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 81622 +8344 +8345 +11.3868% +11.3883%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 81622 +8344 +8345 +11.3868% +11.3883%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92742 +4822 -146 -1240 -699 -1544 +5.4845% -0.1572% -1.3194% -0.7481% -1.6376%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 69422 +5649 +5448 +5811 +6407 +3587 +8.8580% +8.5160% +9.1352% +10.1674% +5.4485%
MTAC_3P_Standard 64317 64464 64219 63385 65967 69836 +5519 +5372 +5617 +6451 +3869 +8.5809% +8.3333% +8.7466% +10.1775% +5.8651%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13172 +1105 +1202 +1232 +933 +9.1572% +10.0418% +10.3183% +7.6232%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13498 +1066 +1027 +1136 +1170 +838 +8.5746% +8.2351% +9.1895% +9.4906% +6.6193%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 13101 +1093 +1054 +1141 +1133 +921 +9.1023% +8.7491% +9.5401% +9.4669% +7.5616%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13517 +956 +1052 +1040 +1107 +743 +7.6109% +8.4396% +8.3353% +8.9202% +5.8165%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 160576 +14352 +7042 +6586 +4749 +3290 +9.8151% +4.5866% +4.2769% +3.0476% +2.0917%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12364 +3201 +2836 +2779 +3030 +2342 +34.9340% +29.7649% +28.9932% +32.4620% +23.3686%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 12068 +2770 +2307 +2656 +2515 +2079 +29.7914% +23.6349% +28.2193% +26.3268% +20.8129%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 10217 +7767 +4133 +3970 +4101 +3868 +317.0204% +67.9323% +63.5505% +67.0536% +60.9230%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 7065 +2362 +2477 +2107 +2142 +2116 +50.2233% +53.9887% +42.4970% +43.5101% +42.7561%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18189 +1999 +1909 +2164 +2134 +1653 +12.3471% +11.7260% +13.5039% +13.2918% +9.9964%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15497 +1898 +1656 +1809 +1826 +1513 +13.9569% +11.9645% +13.2160% +13.3567% +10.8195%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18712 +2460 +2436 +2595 +2787 +2254 +15.1366% +14.9668% +16.1010% +17.5008% +13.6955%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19348 +2331 +2170 +2435 +2603 +1999 +13.6981% +12.6324% +14.3972% +15.5449% +11.5223%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 6161 +2514 +2248 +2297 +2622 +2347 +68.9334% +57.4495% +59.4462% +74.0887% +61.5364%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6076 +1776 +1473 +1279 +1099 +907 +41.3023% +32.0009% +26.6625% +22.0816% +17.5469%
SCP_Astral_250pg_3ms 576 22 936 741 736 3046 +2470 +3024 +2110 +2305 +2310 +428.8194% +13745.4545% +225.4274% +311.0661% +313.8587%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4974 +4337 +2894 +2945 +2928 +2906 +680.8477% +139.1346% +145.1454% +143.1085% +140.5222%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8607 +2362 +2261 +2591 +2480 +2388 +37.8223% +35.6287% +43.0685% +40.4766% +38.3985%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8698 +1976 +1969 +1686 +1675 +1356 +29.3960% +29.2614% +24.0445% +23.8502% +18.4691%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5838 +4856 +3473 +3661 +3602 +494.5010% +146.8499% +168.1672% +161.0912%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7845 +4137 +3838 +3800 +3927 +3742 +111.5696% +95.7824% +93.9431% +100.2297% +91.2016%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21743 +1578 +1614 +1669 +1950 +1845 +7.8254% +8.0183% +8.3142% +9.8520% +9.2723%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5107 +422 +407 +475 +368 +9.0075% +8.6596% +10.2547% +7.7654%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 255646 +10387 +8224 +4.2351% +3.3239%
EWZ_2P_MBR_Exploris_Human 115447 117345 119191 +3744 +1846 +3.2430% +1.5731%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 136191 +7223 +5485 +5.6006% +4.1964%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 194110 +15936 +10567 +8.9441% +5.7572%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 194110 +15936 +10567 +8.9441% +5.7572%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8530 +685 +355 +375 +327 +281 +8.7317% +4.3425% +4.5984% +3.9863% +3.4065%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12758 +1397 +1264 +1407 +1420 +960 +12.2965% +10.9970% +12.3954% +12.5243% +8.1370%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12912 +1439 +1352 +1435 +1516 +1080 +12.5425% +11.6955% +12.5033% +13.3029% +9.1278%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4531 +403 +439 +431 +348 +9.7626% +10.7283% +10.5122% +8.3194%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4617 +402 +369 +399 +403 +280 +9.5374% +8.6864% +9.4595% +9.5634% +6.4561%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4521 +446 +387 +431 +424 +336 +10.9448% +9.3614% +10.5379% +10.3490% +8.0287%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4633 +384 +396 +389 +402 +279 +9.0374% +9.3462% +9.1659% +9.5013% +6.4079%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8213 +958 +631 +873 +734 +676 +13.2047% +8.3223% +11.8937% +9.8141% +8.9691%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4465 +1220 +1076 +1054 +1147 +904 +37.5963% +31.7498% +30.9000% +34.5690% +25.3861%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4279 +1025 +846 +988 +845 +787 +31.4997% +24.6432% +30.0213% +24.6069% +22.5372%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3818 +1368 +1422 +1368 +1421 +1384 +55.8367% +59.3489% +55.8367% +59.2824% +56.8611%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3763 +1255 +1327 +1129 +1121 +1180 +50.0399% +54.4745% +42.8626% +42.4300% +45.6833%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6319 +740 +663 +815 +773 +665 +13.2640% +11.7221% +14.8074% +13.9380% +11.7616%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5446 +725 +608 +663 +635 +602 +15.3569% +12.5672% +13.8616% +13.1989% +12.4277%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6585 +974 +930 +989 +1032 +872 +17.3588% +16.4456% +17.6733% +18.5845% +15.2634%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6751 +905 +802 +908 +946 +786 +15.4807% +13.4813% +15.5400% +16.2963% +13.1769%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2317 +1025 +893 +911 +1029 +958 +79.3344% +62.7107% +64.7937% +79.8913% +70.4930%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2234 +666 +574 +476 +361 +364 +42.4745% +34.5783% +27.0762% +19.2739% +19.4652%
SCP_Astral_250pg_3ms 307 8 350 283 281 1317 +1010 +1309 +967 +1034 +1036 +328.9902% +16362.5000% +276.2857% +365.3710% +368.6833%
SCP_Astral_250pg_6ms 637 756 751 766 767 1893 +1256 +1137 +1142 +1127 +1126 +197.1743% +150.3968% +152.0639% +147.1279% +146.8057%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3149 +942 +874 +980 +919 +932 +42.6824% +38.4176% +45.1821% +41.2108% +42.0388%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3180 +777 +792 +703 +641 +582 +32.3346% +33.1658% +28.3811% +25.2462% +22.4018%
SCP_Astral_500pg_3ms 525 902 828 835 2272 +1747 +1370 +1444 +1437 +332.7619% +151.8847% +174.3961% +172.0958%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2903 +1585 +1456 +1417 +1468 +1435 +120.2580% +100.6220% +95.3567% +102.2997% +97.7520%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5380 +672 +660 +668 +665 +664 +14.2736% +13.9831% +14.1766% +14.1039% +14.0797%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5107 +422 +407 +475 +368 +9.0075% +8.6596% +10.2547% +7.7654%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7572 +531 +466 +7.5415% +6.5578%
EWZ_2P_MBR_Exploris_Human 6167 6284 6512 +345 +228 +5.5943% +3.6283%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7503 +616 +540 +8.9444% +7.7553%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6395 +591 +440 +10.1826% +7.3887%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6395 +591 +440 +10.1826% +7.3887%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92721 -1558
MTAC_3P_Alternating 65832 69409 +3577
MTAC_3P_Standard 65967 69825 +3858
MTAC_Yeast_Alternating_3min 12239 13168 +929
MTAC_Yeast_Alternating_5min 12660 13498 +838
MTAC_Yeast_Standard_3min 12180 13096 +916
MTAC_Yeast_Standard_5min 12772 13515 +743
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 160570 +3285
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12362 +2340
SCP_Astral_1000pg_24ms 9989 12068 +2079
SCP_Astral_1000pg_3ms 6349 10212 +3863
SCP_Astral_1000pg_6ms 4949 7059 +2110
SCP_Astral_10ng_12ms 16536 18188 +1652
SCP_Astral_10ng_24ms 13982 15497 +1515
SCP_Astral_10ng_3ms 16458 18701 +2243
SCP_Astral_10ng_6ms 17349 19348 +1999
SCP_Astral_250pg_12ms 3814 6160 +2346
SCP_Astral_250pg_24ms 5169 6076 +907
SCP_Astral_250pg_3ms 736 3044 +2308
SCP_Astral_250pg_6ms 2066 4974 +2908
SCP_Astral_500pg_12ms 6219 8606 +2387
SCP_Astral_500pg_24ms 7342 8698 +1356
SCP_Astral_500pg_3ms 2234 5835 +3601
SCP_Astral_500pg_6ms 4103 7845 +3742
SCP_Astral_MBR 19891 21743 +1852
Seer_Astral_45 242898
Seer_Astral_single 4739 5107 +368
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 255627 +8205
EWZ_2P_MBR_Exploris_Human 117340 119171 +1831
EWZ_2P_MBR_Exploris_YeastHuman 130702 136182 +5480
MacCoss_Eclipse_Normalization_noNorm 183540 194110 +10570
MacCoss_Eclipse_Normalization_yesNorm 183540 194110 +10570

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 0.0004 +0.0015 +0.0015
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 0.0001 +0.0008 +0.0008
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 0.0002 +0.0007 +0.0003 +0.0012 +0.0009 +0.0009
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 0.0003 +0.0016 -0.0002 +0.0008 +0.0010 +0.0010
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0001 +0.0015 +0.0018 +0.0025 +0.0025
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0010 +0.0014 +0.0022 +0.0024 +0.0025 +0.0025
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 0.0004 +0.0023 +0.0018 +0.0016 +0.0024 +0.0024
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0012 +0.0023 +0.0032 +0.0037 +0.0038
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0003 -0.0008 -0.0008
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0008 +0.0010 +0.0005 +0.0019 +0.0003 +0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0003 +0.0020 +0.0026 +0.0017
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0014 +0.0068 +0.0047 +0.0046 +0.0061 +0.0061
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0007 +0.0037 +0.0055 +0.0037 +0.0046 +0.0053
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0015 +0.0017 +0.0026 +0.0050 +0.0041 +0.0041
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0009 +0.0031 +0.0026 +0.0033 +0.0033
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0023 +0.0043 +0.0014 +0.0037 +0.0036 +0.0036
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0014 +0.0038 +0.0040 +0.0032 +0.0032 +0.0032
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0003 +0.0010 +0.0002 +0.0024 +0.0014 +0.0014
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0003 +0.0036 +0.0038 -0.0006 +0.0049 +0.0049
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0017 +0.0019 +0.0028 +0.0040 +0.0048 +0.0048
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0056 +0.0125 +0.0056 +0.0056
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0018 +0.0069 +0.0044 +0.0067 +0.0062
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0012 +0.0034 +0.0022 +0.0040 +0.0038 +0.0038
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0020 +0.0033 +0.0044 +0.0032 +0.0031 +0.0031
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0053 +0.0066 +0.0076 +0.0088 +0.0088
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0042 +0.0073 +0.0075 +0.0057 +0.0057
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0010 +0.0036 +0.0029 +0.0024 +0.0032 +0.0032
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0003 +0.0023 +0.0025
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 0.0002 +0.0032 +0.0016
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0030 -0.0020 -0.0019 -0.0035 -0.0037 -0.0019
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0006 +0.0006 +0.0019 +0.0023 +0.0019 +0.0037
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0007 +0.0059 +0.0046 +0.0041 +0.0037
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0018 +0.0059 +0.0056 +0.0066 +0.0051 +0.0075
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0035 +0.0023 +0.0013 -0.0015 -0.0007 -0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0020 +0.0056 +0.0065 +0.0076 +0.0074
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0019 -0.0017 +0.0011
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0010 +0.0019 -0.0008 +0.0018 -0.0001 +0.0007
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 0.0000 +0.0049 +0.0042 +0.0042 +0.0040
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0016 +0.0086 +0.0074 +0.0086 +0.0086 +0.0099
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0027 +0.0033 +0.0032 +0.0045 +0.0045 +0.0060
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0026 +0.0044 +0.0076 +0.0069 +0.0071 +0.0073
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0002 +0.0053 +0.0038 +0.0052 +0.0059
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0018 +0.0014 +0.0005 -0.0002 +0.0027 +0.0018
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0007 +0.0043 +0.0080 +0.0073 +0.0067 +0.0067
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 0.0009 +0.0064 +0.0029 +0.0063 +0.0056 +0.0058
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0016 +0.0037 +0.0060 +0.0018 +0.0047 +0.0045
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0020 +0.0022 +0.0022 +0.0006 -0.0007 +0.0022
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0053 +0.0081 +0.0053 +0.0139 +0.0053 +0.0053
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0128 +0.0227 +0.0195 +0.0212 +0.0216 +0.0216
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0022 +0.0058 +0.0062 +0.0008 +0.0043 +0.0046
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0031 -0.0011 -0.0030 +0.0021 +0.0031 +0.0030
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0021 +0.0063 -0.0050 +0.0001 +0.0022 +0.0023
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 -0.0008 +0.0037 +0.0037 -0.0000 +0.0048 +0.0034
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0010 +0.0049 +0.0020 +0.0015 +0.0040 +0.0046
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0032 +0.0106 +0.0105
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 0.0003 +0.0016 +0.0016
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0002 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0003 +0.0005 +0.0000 +0.0005 +0.0004 +0.0004
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0005 +0.0013 +0.0003 +0.0008 +0.0008 +0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0001 +0.0009 +0.0012 +0.0013 +0.0013
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0007 +0.0011 +0.0014 +0.0017 +0.0015 +0.0015
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0002 +0.0010 +0.0009 +0.0010 +0.0012 +0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0008 +0.0016 +0.0018 +0.0022 +0.0022
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0004 +0.0002 +0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0010 +0.0014 +0.0005 +0.0016 +0.0010 +0.0010
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0000 +0.0015 +0.0030 +0.0019
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0011 +0.0057 +0.0039 +0.0042 +0.0048 +0.0048
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0009 +0.0029 +0.0039 +0.0035 +0.0035 +0.0043
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0019 +0.0017 +0.0025 +0.0046 +0.0043 +0.0043
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0007 +0.0023 +0.0016 +0.0022 +0.0022
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0018 +0.0032 +0.0014 +0.0030 +0.0026 +0.0026
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0011 +0.0031 +0.0032 +0.0027 +0.0026 +0.0026
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0001 +0.0005 -0.0003 +0.0011 +0.0008 +0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 -0.0001 +0.0029 +0.0026 +0.0002 +0.0031 +0.0031
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0012 +0.0019 +0.0020 +0.0025 +0.0026 +0.0026
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0051 +0.0110 +0.0051 +0.0051
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0034 +0.0071 +0.0055 +0.0064 +0.0064
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0010 +0.0029 +0.0014 +0.0030 +0.0023 +0.0023
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0022 +0.0038 +0.0039 +0.0040 +0.0038 +0.0038
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0050 +0.0032 +0.0054 +0.0066 +0.0066
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0035 +0.0061 +0.0054 +0.0045 +0.0045
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0016 +0.0034 +0.0031 +0.0024 +0.0029 +0.0029
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0001 +0.0013 +0.0015
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0003 +0.0014 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0013 -0.0012 -0.0010 -0.0016 -0.0015 -0.0007
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0001 +0.0008 +0.0013 +0.0020 +0.0018 +0.0023
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0009 +0.0045 +0.0042 +0.0038 +0.0030
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0024 +0.0061 +0.0045 +0.0048 +0.0037 +0.0049
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0014 +0.0024 +0.0021 +0.0000 +0.0002 +0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0012 +0.0035 +0.0039 +0.0049 +0.0046
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0004 +0.0001 +0.0017
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0007 +0.0020 -0.0013 +0.0010 +0.0010 +0.0013
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 0.0003 +0.0040 +0.0026 +0.0035 +0.0042
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0012 +0.0060 +0.0067 +0.0069 +0.0055 +0.0071
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0034 +0.0010 -0.0001 +0.0007 -0.0003 +0.0031
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0027 +0.0051 +0.0061 +0.0067 +0.0067 +0.0059
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0013 +0.0035 +0.0018 +0.0029 +0.0031
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0011 +0.0021 +0.0002 +0.0003 +0.0014 +0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0006 +0.0027 +0.0052 +0.0043 +0.0038 +0.0045
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 0.0002 +0.0041 +0.0021 +0.0040 +0.0031 +0.0035
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0004 +0.0035 +0.0037 +0.0015 +0.0026 +0.0040
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0007 +0.0006 +0.0025 -0.0004 -0.0007 +0.0021
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0072 +0.0132 +0.0154 +0.0119 +0.0072 +0.0072
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0069 +0.0169 +0.0137 +0.0124 +0.0117 +0.0117
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0019 +0.0058 +0.0054 +0.0026 +0.0046 +0.0041
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0020 -0.0000 -0.0020 +0.0024 +0.0025 +0.0048
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0029 +0.0061 -0.0038 +0.0001 +0.0026 +0.0026
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0002 +0.0021 +0.0024 -0.0007 +0.0030 +0.0020
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0003 +0.0021 +0.0014 +0.0019 +0.0025 +0.0038
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0032 +0.0106 +0.0101
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 4549 -19846 -20039

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 339 -432 -423

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0745 +0.0429 +0.0435

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 264 -580 +893

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -38 -228 -94

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 12 +4 +1 +1 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 3 +0 +1 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1723 +0.0264 +0.0302 +0.0323 +0.0349 +0.0348
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1641 +0.0248 +0.0279 +0.0290 +0.0318 +0.0316
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1728 +0.0272 +0.0303 +0.0320 +0.0319
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1597 +0.0066 +0.0188 +0.0221 +0.0241 +0.0242
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1798 +0.0100 +0.0159 +0.0183 +0.0199 +0.0200
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1547 +0.0044 +0.0181 +0.0210 +0.0225 +0.0224
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1546 +0.0065 +0.0046 +0.0050 +0.0041 +0.0040
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5968 +0.0099 +0.0099
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2160 +0.0443 +0.0442

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0862 +0.0099 +0.0123 +0.0135 +0.0142 +0.0105
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0820 +0.0097 +0.0117 +0.0120 +0.0132 +0.0102
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0787 +0.0114 +0.0126 +0.0128 +0.0100
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0666 -0.0112 +0.0063 +0.0074 +0.0078 +0.0065
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0818 +0.0026 +0.0062 +0.0065 +0.0046 +0.0043
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0639 -0.0132 +0.0072 +0.0070 +0.0071 +0.0055
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1017 -0.0012 -0.0003 -0.0020 -0.0010 -0.0016
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5786 -0.0095 -0.0094
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1410 +0.0177 +0.0163

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0107 -0.0020 +0.0070 +0.0012 +0.0000 -0.0670
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0037 -0.0076 +0.0055 -0.0002 -0.0001 -0.0371
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0011 +0.0007 -0.0023 -0.0001 -0.0000 +0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0610 +0.0012 -0.0008 +0.0020 -0.0002 -0.0656
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0613 -0.0054 -0.0006 -0.0003 +0.0001 -0.0110
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0550 -0.0080 +0.0050 -0.0016 -0.0001 +0.0261
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1281 -0.0059 -0.0059 +0.0211 -0.0012 -0.1072
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0817 +0.0062 +0.0047 -0.0191 -0.0001 +0.0213
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1957 +0.0183 -0.0240 +0.0287 +0.0020 -0.0848
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1057 +0.0048 -0.0054 -0.0067 +0.0002 +0.0172
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0470 +0.0009 +0.0001 -0.0089 -0.0000 +0.0014
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2064 +0.0051 -0.0017 +0.0004 +0.0004 +0.0024
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1342 -0.0032 -0.0062 -0.0160 +0.0006 +0.1111
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0806 +0.0043 -0.0045 -0.0054 -0.0001 -0.0213
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0352 +0.0169 -0.0238 +0.0355 +0 -0.0613
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0139 +0.0009 +0.0076 -0.0005 +0.0006 -0.0600
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0027 -0.0089 +0.0045 +0.0004 +0.0011 -0.0395
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0159 +0.0054 -0.0044 +0.0010 +0.0033 +0.0091
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0709 +0.0013 +0.0005 -0.0055 +0.0004 -0.0502
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0611 -0.0060 -0.0005 -0.0005 -0.0005 -0.0086
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0456 -0.0084 +0.0078 -0.0007 +0.0020 +0.0125
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1595 -0.0077 -0.0028 +0.0144 -0.0004 -0.0612
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0778 +0.0048 +0.0016 -0.0170 -0.0057 +0.0278
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2389 +0.0504 -0.0481 +0.0073 +0.0089 -0.0355
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1049 +0.0031 -0.0032 -0.0081 +0.0006 +0.0284
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0443 +0.0011 -0.0008 -0.0084 -0.0000 +0.0023
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2184 +0.0036 -0.0008 +0.0016 +0.0018 +0.0133
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1146 +0.0005 -0.0096 -0.0297 +0.0070 +0.1030
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0818 +0.0056 -0.0034 -0.0033 +0.0038 -0.0305
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0595 +0.0405 -0.0089 +0.0322 +0.0276 -0.0854
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1421 +0.0343 +0.0202 -0.0086 +0.0005 -0.1662
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1259 +0.0169 -0.0058 +0.0004 +0.0004 -0.0844
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1352 +0.0117 -0.0078 +0.0011 -0.0001 -0.1255
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1452 +0.0441 -0.0007 -0.0136 +0.0007 -0.1535
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1354 +0.0164 -0.0031 -0.0002 +0.0007 -0.0846
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1358 +0.0170 -0.0063 +0.0017 +0.0006 -0.1328
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2123 +0.0445 +0.0761 -0.1281 +0.0017 -0.3603
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0402 -0.0103 +0.0134 -0.0147 -0.0018 -0.1092
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2647 -0.0030 +0.1483 +0.0078 -0.0120 -0.6808
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1887 +0.0037 +0.0045 +0.0051 +0.0002 -0.1620
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0435 +0.0676 -0.0087 -0.0168 +0.0006 -0.1088
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1861 +0.0316 +0.0062 -0.0049 +0.0001 -0.1493
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2553 -0.0093 +0.0378 -0.0706 +0.0033 -0.3248
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0611 +0.0977 -0.0155 +0.0159 +0.0001 -0.1869
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5950 +0.0737 +0.1982 -0.0827 -0.0008 -0.6793
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0663 +0.0149 -0.0182 -0.0054 +0.1015 -0.1560
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0397 +0.0035 +0.0005 +0.0043 +0.0189 -0.0607
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0545 -0.0157 -0.0104 +0.0083 +0.0352 -0.0928
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0515 -0.0042 +0.0002 -0.0084 +0.0711 -0.1392
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0373 +0.0032 -0.0030 +0.0035 +0.0313 -0.0655
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0563 +0.0000 +0.0073 -0.0081 +0.0305 -0.0996
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0448 +0.0146 +0.0452 -0.0355 +0.0761 -0.2590
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0193 -0.0057 -0.0062 -0.0031 +0.0154 -0.0446
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.1434 -0.1294 +0.1626 +0.0090 +0.0813 -0.4384
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0332 -0.0046 +0.0074 +0.0016 +0.0039 -0.0398
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0100 +0.0109 -0.0066 +0.0090 -0.0065 -0.0269
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0369 -0.0053 +0.0093 +0.0025 +0.0083 -0.0537
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0684 -0.0166 +0.0170 -0.0166 +0.0315 -0.1806
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0216 +0.0068 -0.0006 -0.0039 +0.0560 -0.1081
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1538 -0.0891 -0.0032 -0.0082 +0.0618 -0.3385
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 19.2700 -4.8000 +1.9500 -0.6000 +2.1400 +0.2400 -19.9418% +11.2587% -3.0196% +12.4927% +1.2612%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10.2700 -2.4800 +1.2000 +1.9100 +0.9800 +2.1400 -19.4510% +13.2304% +22.8469% +10.5490% +26.3223%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 10.6100 -1.7000 +1.6500 +0.9500 -0.2000 +0.8200 -13.8099% +18.4152% +9.8344% -1.8501% +8.3759%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.1900 +0.9600 +0.7800 +0.2500 +0.9100 +22.6950% +17.6871% +5.0607% +21.2617%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.1000 -0.2800 +0.7200 +0.3500 +0.5600 +0.5400 -5.2045% +16.4384% +7.3684% +12.3348% +11.8421%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.2100 -0.2200 +1.0700 +0.7700 +0.5500 +0.9700 -4.0516% +25.8454% +17.3423% +11.8026% +22.8774%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.7900 +0.2400 +1.3700 +1.2600 +1.3300 +1.2500 +4.3243% +30.9955% +27.8146% +29.8206% +27.5330%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 18.5900 -9.0700 -1.1700 +0.2700 -0.6900 +0.6900 -32.7910% -5.9211% +1.4738% -3.5788% +3.8547%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.6300 -1.1600 +0.0400 -0.0200 +0.5400 +0.2700 -20.0345% +0.8715% -0.4301% +13.2029% +6.1927%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.0800 -1.1800 +0.6800 -0.8000 +0.0700 -18.8498% +15.4545% -13.6054% +1.3972%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.5600 +1.0400 +1.8300 +0.7600 +1.9200 +1.7300 +23.0088% +49.0617% +15.8333% +52.7473% +45.1697%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.2600 -1.4800 +0.7500 +0.3400 +0.8200 +0.5400 -25.7840% +21.3675% +8.6735% +23.8372% +14.5161%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.2400 -0.8300 +0.7100 +0.7300 +0.5000 +0.7700 -11.7397% +12.8391% +13.2486% +8.7108% +14.0768%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 7.1600 -0.4300 +1.4300 +1.0200 +1.6200 +1.2700 -5.6653% +24.9564% +16.6124% +29.2419% +21.5620%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.8800 -0.5700 +1.2100 +1.5800 +1.4700 +1.4600 -8.8372% +25.9101% +36.7442% +33.3333% +33.0317%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 7.0500 -0.3300 +2.1200 +2.4200 +1.4300 +2.0900 -4.4715% +43.0020% +52.2678% +25.4448% +42.1371%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.5500 -0.1900 +0.8900 +1.1600 +0.9600 -4.0084% +24.3169% +34.2183% +26.7409%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.5100 -0.7500 +0.6700 +0.7500 +0.4500 -14.2586% +17.4479% +19.9468% +11.0837%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.2300 -0.4200 +0.8000 +0.5200 +0.7800 +0.6800 -9.0323% +23.3236% +14.0162% +22.6087% +19.1549%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 5.0600 +0.8900 +1.7700 +1.3700 +1.7900 +1.5400 +21.3429% +53.7994% +37.1274% +54.7401% +43.7500%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.6100 -0.6700 +1.0800 +1.0100 +1.1200 +0.9100 -12.6894% +30.5949% +28.0556% +32.0917% +24.5946%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.7500 -0.7600 +0.9300 +0.6000 -0.0600 +0.7200 -13.7931% +24.3455% +14.4578% -1.2474% +17.8660%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 5.1600 +0.4300 +1.7000 +1.5900 +1.3900 +9.0909% +49.1329% +44.5378% +36.8700%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.1800 +0.5300 +1.5600 +1.4500 +1.4000 +1.6800 +11.3978% +43.0939% +38.8740% +37.0370% +48.0000%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.1100 -1.9300 +0.5600 +1.0100 -0.1000 -21.3496% +8.5496% +16.5574% -1.3870%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.8500 +0.3800 +0.7100 -0.7300 -0.3700 +8.5011% +17.1498% -13.0824% -7.0881%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 27.7800 +1.6000 +3.5000 +6.1115% +14.4152%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.7700 -0.1400 +0.3500 -1.0844% +2.8180%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 13.9900 +1.9300 -0.4200 +16.0033% -2.9146%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 46.1200 +18.6100 +17.8400 +67.6481% +63.0835%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 38.8600 +11.1900 +10.3600 +40.4409% +36.3509%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png