Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1341291 +244797 +34286 +29336 +47750 +47750 +22.3254% +2.6232% +2.2361% +3.6914% +3.6914%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 654339 +68017 +38577 +43629 +54458 +54458 +11.6006% +6.2649% +7.1440% +9.0781% +9.0781%
MTAC_3P_Standard 596590 623022 617574 607435 607435 660649 +64059 +37627 +43075 +53214 +53214 +10.7375% +6.0394% +6.9749% +8.7604% +8.7604%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 151835 +14287 +14996 +16275 +16275 +10.3869% +10.9589% +12.0058% +12.0058%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 171916 +16275 +15365 +15407 +16881 +17072 +10.4568% +9.8147% +9.8442% +10.8885% +11.0253%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 154813 +16304 +15428 +15521 +16928 +17026 +11.7711% +11.0686% +11.1428% +12.2769% +12.3568%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 173647 +14685 +14915 +14487 +15725 +15725 +9.2381% +9.3963% +9.1022% +9.9574% +9.9574%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1319509 +296773 +164840 +195636 +135425 +135425 +29.0176% +14.2760% +17.4073% +11.4371% +11.4371%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 52859 +11977 +11159 +10434 +10759 +10759 +29.2965% +26.7602% +24.5940% +25.5558% +25.5558%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 51797 +10728 +9395 +9774 +10645 +10645 +26.1219% +22.1570% +23.2587% +25.8675% +25.8675%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 41632 +32892 +18517 +18617 +18719 +18719 +376.3387% +80.1082% +80.8907% +81.6960% +81.6960%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 29472 +12537 +11919 +11063 +11124 +11124 +74.0301% +67.9029% +60.0956% +60.6279% +60.6279%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 117677 +17769 +14786 +18694 +19029 +19029 +17.7854% +14.3705% +18.8861% +19.2898% +19.2898%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 85683 +14585 +12955 +14238 +14557 +14557 +20.5139% +17.8129% +19.9286% +20.4665% +20.4665%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 122893 +17189 +16396 +17271 +18459 +18381 +16.2614% +15.3957% +16.3517% +17.6753% +17.5875%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 130790 +15633 +13474 +16468 +17709 +17540 +13.5754% +11.4852% +14.4049% +15.6605% +15.4879%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 19163 +8969 +8357 +7925 +7930 +7930 +87.9831% +77.3367% +70.5197% +70.5956% +70.5956%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 19668 +4861 +4235 +3627 +3969 +3969 +32.8291% +27.4412% +22.6108% +25.2819% +25.2819%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8139 +6878 +6107 +5689 +5753 +5753 +545.4401% +300.5413% +232.2041% +241.1148% +241.1148%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14553 +13117 +9770 +8863 +8822 +8822 +913.4401% +204.2651% +155.7645% +153.9347% +153.9347%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 31110 +9400 +9215 +8530 +8647 +8647 +43.2980% +42.0872% +37.7768% +38.4944% +38.4944%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 32351 +6491 +6208 +6091 +6726 +6726 +25.1005% +23.7463% +23.1950% +26.2478% +26.2478%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 19387 +15903 +12489 +12553 +12553 +456.4581% +181.0525% +183.6845% +183.6845%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 27516 +16817 +16042 +14634 +14627 +14627 +157.1829% +139.8117% +113.6004% +113.4844% +113.4844%
SCP_Astral_MBR 92167 93585 91884 90864 90838 109215 +17048 +15630 +17331 +18351 +18377 +18.4969% +16.7014% +18.8618% +20.1961% +20.2305%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 58660 +1961 +2867 +2769 +2769 +3.4586% +5.1386% +4.9543% +4.9543%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1910005 +133877 +134659 +7.5376% +7.5849%
EWZ_2P_MBR_Exploris_Human 836809 836809 896227 +59418 +59418 +7.1005% +7.1005%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1001458 +86534 +87509 +9.4581% +9.5748%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2286597 +208563 +208561 +10.0366% +10.0364%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2286597 +208563 +208561 +10.0366% +10.0364%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 149724 +38220 +16105 +18365 +17693 +17693 +34.2768% +12.0529% +13.9808% +13.4006% +13.4006%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 126187 +17920 +8835 +11528 +11371 +11371 +16.5517% +7.5286% +10.0542% +9.9037% +9.9037%
MTAC_3P_Standard 110265 118693 115800 116148 116148 127752 +17487 +9059 +11952 +11604 +11604 +15.8591% +7.6323% +10.3212% +9.9907% +9.9907%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56859 +8001 +7827 +7864 +7864 +16.3760% +15.9630% +16.0506% +16.0506%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63514 +9545 +8439 +7674 +7630 +7693 +17.6861% +15.3227% +13.7428% +13.6533% +13.7816%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 57863 +9242 +8198 +7574 +7403 +7448 +19.0082% +16.5066% +15.0609% +14.6710% +14.7734%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 64074 +9014 +8155 +7367 +7247 +7247 +16.3712% +14.5836% +12.9913% +12.7527% +12.7527%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 72252 +20980 +13468 +17205 +13659 +13687 +40.9190% +22.9110% +31.2551% +23.3117% +23.3706%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 20059 +5619 +5101 +4810 +4352 +4352 +38.9127% +34.1022% +31.5431% +27.7074% +27.7074%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 19402 +4919 +4337 +4486 +4332 +4330 +33.9640% +28.7886% +30.0751% +28.7459% +28.7288%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 16739 +7999 +7363 +7350 +7375 +7354 +91.5217% +78.5303% +78.2831% +78.7591% +78.3591%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 16828 +7930 +7569 +7044 +7018 +7018 +89.1212% +81.7475% +71.9951% +71.5392% +71.5392%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 42439 +7574 +6142 +8097 +8014 +8014 +21.7238% +16.9215% +23.5775% +23.2796% +23.2796%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 31191 +6542 +5725 +6072 +5968 +5968 +26.5406% +22.4810% +24.1729% +23.6609% +23.6609%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 44963 +8275 +7287 +7314 +7542 +7504 +22.5551% +19.3412% +19.4268% +20.1545% +20.0326%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 46967 +6811 +5422 +6924 +7074 +7021 +16.9614% +13.0509% +17.2914% +17.7324% +17.5762%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7788 +4122 +3839 +3579 +3542 +3542 +112.4386% +97.2145% +85.0321% +83.4197% +83.4197%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7728 +2429 +2117 +1873 +1662 +1661 +45.8388% +37.7295% +31.9898% +27.3986% +27.3776%
SCP_Astral_250pg_3ms 675 721 908 879 879 3797 +3122 +3076 +2889 +2918 +2918 +462.5185% +426.6297% +318.1718% +331.9681% +331.9681%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6113 +4677 +4375 +3968 +3950 +3948 +325.6964% +251.7261% +184.9883% +182.6167% +182.3557%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12474 +4680 +4502 +4222 +4068 +4066 +60.0462% +56.4727% +51.1634% +48.3940% +48.3587%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12308 +3150 +2966 +2937 +2894 +2893 +34.3962% +31.7491% +31.3414% +30.7414% +30.7276%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8413 +6567 +5813 +5827 +5824 +355.7421% +223.5769% +225.3287% +224.9517%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 10936 +7062 +6781 +6162 +6131 +6132 +182.2922% +163.2010% +129.0742% +127.5963% +127.6436%
SCP_Astral_MBR 24110 24991 24570 24544 24527 30124 +6014 +5133 +5554 +5580 +5597 +24.9440% +20.5394% +22.6048% +22.7347% +22.8197%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 58660 +1961 +2867 +2769 +2769 +3.4586% +5.1386% +4.9543% +4.9543%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 61516 +6245 +6369 +11.2989% +11.5491%
EWZ_2P_MBR_Exploris_Human 48465 48473 53675 +5210 +5202 +10.7500% +10.7317%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 57830 +6584 +6653 +12.8478% +13.0000%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 78998 +5720 +5721 +7.8059% +7.8074%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 78998 +5720 +5721 +7.8059% +7.8074%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91794 +3874 -1094 -2188 -1647 -2492 +4.4063% -1.1778% -2.3281% -1.7626% -2.6430%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67591 +3818 +3617 +3980 +4576 +1756 +5.9869% +5.6539% +6.2568% +7.2618% +2.6673%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68254 +3937 +3790 +4035 +4869 +2287 +6.1212% +5.8793% +6.2832% +7.6816% +3.4669%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12927 +860 +957 +987 +688 +7.1269% +7.9950% +8.2663% +5.6214%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13163 +731 +692 +801 +835 +503 +5.8800% +5.5489% +6.4795% +6.7732% +3.9731%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12630 +622 +583 +670 +662 +450 +5.1799% +4.8394% +5.6020% +5.5314% +3.6946%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13302 +741 +837 +825 +892 +528 +5.8992% +6.7148% +6.6122% +7.1878% +4.1334%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 158532 +12308 +4998 +4542 +2705 +1246 +8.4172% +3.2553% +2.9495% +1.7359% +0.7922%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11407 +2244 +1879 +1822 +2073 +1385 +24.4898% +19.7208% +19.0089% +22.2091% +13.8196%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11442 +2144 +1681 +2030 +1889 +1453 +23.0587% +17.2216% +21.5682% +19.7739% +14.5460%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9349 +6899 +3265 +3102 +3233 +3000 +281.5918% +53.6654% +49.6558% +52.8613% +47.2515%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6564 +1861 +1976 +1606 +1641 +1615 +39.5705% +43.0689% +32.3921% +33.3333% +32.6329%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17618 +1428 +1338 +1593 +1563 +1082 +8.8203% +8.2187% +9.9407% +9.7353% +6.5433%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15069 +1470 +1228 +1381 +1398 +1085 +10.8096% +8.8722% +10.0891% +10.2260% +7.7589%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17708 +1456 +1432 +1591 +1783 +1250 +8.9589% +8.7982% +9.8716% +11.1962% +7.5951%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18305 +1288 +1127 +1392 +1560 +956 +7.5689% +6.5607% +8.2304% +9.3162% +5.5104%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5383 +1736 +1470 +1519 +1844 +1569 +47.6008% +37.5671% +39.3116% +52.1051% +41.1379%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5714 +1414 +1111 +917 +737 +545 +32.8837% +24.1364% +19.1161% +14.8081% +10.5436%
SCP_Astral_250pg_3ms 576 22 936 741 736 2682 +2106 +2660 +1746 +1941 +1946 +365.6250% +12090.9091% +186.5385% +261.9433% +264.4022%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4486 +3849 +2406 +2457 +2440 +2418 +604.2386% +115.6731% +121.0941% +119.2571% +116.9246%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7587 +1342 +1241 +1571 +1460 +1368 +21.4892% +19.5556% +26.1137% +23.8290% +21.9971%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7642 +920 +913 +630 +619 +300 +13.6864% +13.5681% +8.9846% +8.8139% +4.0861%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5263 +4281 +2898 +3086 +3027 +435.9470% +122.5370% +141.7547% +135.3757%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7172 +3464 +3165 +3127 +3254 +3069 +93.4196% +78.9868% +77.3053% +83.0526% +74.7989%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21198 +1033 +1069 +1124 +1405 +1300 +5.1227% +5.3107% +5.5993% +7.0985% +6.5333%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4925 +240 +225 +293 +186 +5.1227% +4.7872% +6.3256% +3.9249%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 248697 +3438 +1275 +1.4018% +0.5153%
EWZ_2P_MBR_Exploris_Human 115447 117345 115535 +88 -1810 +0.0762% -1.5425%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 133379 +4411 +2673 +3.4202% +2.0450%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 191334 +13160 +7791 +7.3860% +4.2448%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 191334 +13160 +7791 +7.3860% +4.2448%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8372 +527 +197 +217 +169 +123 +6.7177% +2.4098% +2.6609% +2.0602% +1.4911%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12168 +807 +674 +817 +830 +370 +7.1032% +5.8639% +7.1976% +7.3205% +3.1361%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12360 +887 +800 +883 +964 +528 +7.7312% +6.9204% +7.6936% +8.4591% +4.4625%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4450 +322 +358 +350 +267 +7.8004% +8.7488% +8.5366% +6.3830%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4524 +309 +276 +306 +310 +187 +7.3310% +6.4972% +7.2546% +7.3564% +4.3117%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4348 +273 +214 +258 +251 +163 +6.6994% +5.1766% +6.3081% +6.1264% +3.8949%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4542 +293 +305 +298 +311 +188 +6.8957% +7.1985% +7.0217% +7.3505% +4.3179%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7974 +719 +392 +634 +495 +437 +9.9104% +5.1701% +8.6376% +6.6185% +5.7981%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4107 +862 +718 +696 +789 +546 +26.5639% +21.1862% +20.4046% +23.7794% +15.3328%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4081 +827 +648 +790 +647 +589 +25.4149% +18.8756% +24.0049% +18.8410% +16.8671%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3479 +1029 +1083 +1029 +1082 +1045 +42% +45.2003% +42% +45.1398% +42.9334%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3503 +995 +1067 +869 +861 +920 +39.6730% +43.8013% +32.9916% +32.5889% +35.6175%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6126 +547 +470 +622 +580 +472 +9.8046% +8.3098% +11.3009% +10.4580% +8.3481%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5264 +543 +426 +481 +453 +420 +11.5018% +8.8053% +10.0564% +9.4159% +8.6705%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6170 +559 +515 +574 +617 +457 +9.9626% +9.1070% +10.2573% +11.1111% +7.9993%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6358 +512 +409 +515 +553 +393 +8.7581% +6.8751% +8.8140% +9.5263% +6.5884%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2056 +764 +632 +650 +768 +697 +59.1331% +44.3820% +46.2304% +59.6273% +51.2877%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2070 +502 +410 +312 +197 +200 +32.0153% +24.6988% +17.7474% +10.5179% +10.6952%
SCP_Astral_250pg_3ms 307 8 350 283 281 1077 +770 +1069 +727 +794 +796 +250.8143% +13362.5000% +207.7143% +280.5654% +283.2740%
SCP_Astral_250pg_6ms 637 756 751 766 767 1744 +1107 +988 +993 +978 +977 +173.7834% +130.6878% +132.2237% +127.6762% +127.3794%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2765 +558 +490 +596 +535 +548 +25.2832% +21.5385% +27.4781% +23.9910% +24.7181%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2776 +373 +388 +299 +237 +178 +15.5223% +16.2479% +12.0711% +9.3344% +6.8514%
SCP_Astral_500pg_3ms 525 902 828 835 2020 +1495 +1118 +1192 +1185 +284.7619% +123.9468% +143.9614% +141.9162%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2650 +1332 +1203 +1164 +1215 +1182 +101.0622% +83.1375% +78.3311% +84.6690% +80.5177%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5144 +436 +424 +432 +429 +428 +9.2608% +8.9831% +9.1681% +9.0986% +9.0755%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4925 +240 +225 +293 +186 +5.1227% +4.7872% +6.3256% +3.9249%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7181 +140 +75 +1.9884% +1.0554%
EWZ_2P_MBR_Exploris_Human 6167 6284 6158 -9 -126 -0.1459% -2.0051%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7216 +329 +253 +4.7771% +3.6335%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6252 +448 +297 +7.7188% +4.9874%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6252 +448 +297 +7.7188% +4.9874%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91784 -2495
MTAC_3P_Alternating 65832 67585 +1753
MTAC_3P_Standard 65967 68248 +2281
MTAC_Yeast_Alternating_3min 12239 12920 +681
MTAC_Yeast_Alternating_5min 12660 13156 +496
MTAC_Yeast_Standard_3min 12180 12625 +445
MTAC_Yeast_Standard_5min 12772 13299 +527
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 158523 +1238
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11403 +1381
SCP_Astral_1000pg_24ms 9989 11442 +1453
SCP_Astral_1000pg_3ms 6349 9349 +3000
SCP_Astral_1000pg_6ms 4949 6562 +1613
SCP_Astral_10ng_12ms 16536 17617 +1081
SCP_Astral_10ng_24ms 13982 15067 +1085
SCP_Astral_10ng_3ms 16458 17704 +1246
SCP_Astral_10ng_6ms 17349 18301 +952
SCP_Astral_250pg_12ms 3814 5383 +1569
SCP_Astral_250pg_24ms 5169 5714 +545
SCP_Astral_250pg_3ms 736 2682 +1946
SCP_Astral_250pg_6ms 2066 4485 +2419
SCP_Astral_500pg_12ms 6219 7587 +1368
SCP_Astral_500pg_24ms 7342 7642 +300
SCP_Astral_500pg_3ms 2234 5263 +3029
SCP_Astral_500pg_6ms 4103 7172 +3069
SCP_Astral_MBR 19891 21198 +1307
Seer_Astral_45 242898
Seer_Astral_single 4739 4925 +186
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 248693 +1271
EWZ_2P_MBR_Exploris_Human 117340 115531 -1809
EWZ_2P_MBR_Exploris_YeastHuman 130702 133374 +2672
MacCoss_Eclipse_Normalization_noNorm 183540 191334 +7794
MacCoss_Eclipse_Normalization_yesNorm 183540 191334 +7794

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0008 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0007 -0.0000 -0.0000
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0006 -0.0002 -0.0006 +0.0004 +0.0001 +0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0005 +0.0009 -0.0009 +0.0001 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0010 +0.0006 +0.0009 +0.0017 +0.0017
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0009 -0.0005 +0.0004 +0.0005 +0.0006 +0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0008 +0.0011 +0.0006 +0.0005 +0.0013 +0.0013
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0003 +0.0013 +0.0022 +0.0027 +0.0028
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0002 -0.0004 -0.0004
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0002 +0.0004 -0.0000 +0.0013 -0.0002 -0.0002
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0010 +0.0013 +0.0020 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0012 +0.0066 +0.0044 +0.0043 +0.0058 +0.0058
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0005 +0.0035 +0.0053 +0.0035 +0.0044 +0.0051
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0011 +0.0013 +0.0022 +0.0047 +0.0037 +0.0037
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0001 +0.0021 +0.0016 +0.0023 +0.0023
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0004 +0.0024 -0.0005 +0.0019 +0.0017 +0.0017
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0004 +0.0028 +0.0030 +0.0022 +0.0021 +0.0021
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0002 +0.0006 -0.0002 +0.0020 +0.0010 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0011 +0.0050 +0.0052 +0.0009 +0.0064 +0.0064
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0024 -0.0022 -0.0012 +0.0000 +0.0007 +0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0021 +0.0089 +0.0021 +0.0021
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0025 +0.0076 +0.0051 +0.0074 +0.0069
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0008 +0.0014 +0.0002 +0.0020 +0.0018 +0.0018
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0013 +0.0025 +0.0037 +0.0025 +0.0024 +0.0024
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0025 +0.0038 +0.0047 +0.0060 +0.0060
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0044 +0.0075 +0.0077 +0.0059 +0.0059
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0004 +0.0023 +0.0016 +0.0011 +0.0018 +0.0018
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0005 +0.0027 +0.0027
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0017 +0.0009 +0.0010
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0029 -0.0000 -0.0015
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0032 -0.0022 -0.0022 -0.0038 -0.0040 -0.0022
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0023 -0.0010 +0.0002 +0.0006 +0.0002 +0.0020
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0037 +0.0028 +0.0015 +0.0010 +0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0009 +0.0050 +0.0047 +0.0057 +0.0043 +0.0066
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0012 +0.0046 +0.0036 +0.0008 +0.0016 +0.0013
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0020 +0.0016 +0.0025 +0.0035 +0.0034
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0023 -0.0020 +0.0007
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0020 +0.0009 -0.0018 +0.0009 -0.0011 -0.0003
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0022 +0.0027 +0.0020 +0.0020 +0.0018
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0032 +0.0038 +0.0026 +0.0038 +0.0038 +0.0051
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0010 +0.0069 +0.0069 +0.0082 +0.0082 +0.0097
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0016 +0.0034 +0.0066 +0.0059 +0.0061 +0.0063
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0025 +0.0030 +0.0015 +0.0029 +0.0036
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0016 +0.0016 +0.0007 +0.0000 +0.0029 +0.0020
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0010 +0.0027 +0.0063 +0.0056 +0.0051 +0.0050
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0035 +0.0019 -0.0015 +0.0019 +0.0011 +0.0014
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0017 +0.0070 +0.0093 +0.0051 +0.0081 +0.0078
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0023 +0.0018 +0.0019 +0.0002 -0.0010 +0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0022 +0.0050 +0.0022 +0.0108 +0.0022 +0.0022
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0038 +0.0136 +0.0104 +0.0122 +0.0125 +0.0126
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0016 +0.0019 +0.0023 -0.0031 +0.0004 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0032 +0.0052 +0.0033 +0.0083 +0.0093 +0.0092
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0028 +0.0070 -0.0043 +0.0008 +0.0029 +0.0030
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0085 +0.0130 +0.0130 +0.0093 +0.0141 +0.0128
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0013 +0.0072 +0.0043 +0.0038 +0.0063 +0.0069
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0037 +0.0111 +0.0110
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0004 +0.0008 +0.0008
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0002 +0.0000 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0002 +0.0003 -0.0001 +0.0004 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0000 +0.0009 -0.0002 +0.0004 +0.0003 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0006 +0.0004 +0.0007 +0.0008 +0.0008
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 -0.0002 +0.0002 +0.0006 +0.0008 +0.0006 +0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0004 +0.0005 +0.0004 +0.0004 +0.0007 +0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0004 +0.0012 +0.0014 +0.0018 +0.0018
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0006 +0.0003 +0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0006 +0.0011 +0.0001 +0.0013 +0.0007 +0.0007
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0006 +0.0010 +0.0024 +0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0010 +0.0056 +0.0038 +0.0041 +0.0047 +0.0047
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0014 +0.0034 +0.0043 +0.0040 +0.0040 +0.0048
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0011 +0.0009 +0.0017 +0.0038 +0.0035 +0.0035
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0005 +0.0021 +0.0014 +0.0020 +0.0020
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0001 +0.0014 -0.0003 +0.0013 +0.0009 +0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0006 +0.0025 +0.0026 +0.0022 +0.0021 +0.0021
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0002 +0.0003 -0.0005 +0.0010 +0.0006 +0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0017 +0.0047 +0.0043 +0.0019 +0.0048 +0.0048
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0016 -0.0009 -0.0008 -0.0003 -0.0002 -0.0002
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0038 +0.0097 +0.0038 +0.0038
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0015 +0.0052 +0.0036 +0.0045 +0.0045
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0002 +0.0016 +0.0002 +0.0018 +0.0011 +0.0011
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0016 +0.0031 +0.0033 +0.0033 +0.0032 +0.0032
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0025 +0.0006 +0.0028 +0.0040 +0.0040
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0040 +0.0065 +0.0059 +0.0050 +0.0050
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0008 +0.0025 +0.0023 +0.0016 +0.0021 +0.0021
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0005 +0.0027 +0.0027
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 -0.0000 +0.0011 +0.0013
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0020 -0.0003 -0.0013
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0014 -0.0012 -0.0011 -0.0016 -0.0016 -0.0008
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0009 -0.0001 +0.0005 +0.0012 +0.0009 +0.0015
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0010 +0.0026 +0.0024 +0.0020 +0.0012
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0005 +0.0042 +0.0026 +0.0030 +0.0018 +0.0030
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0005 +0.0033 +0.0030 +0.0009 +0.0011 +0.0014
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0016 +0.0007 +0.0011 +0.0022 +0.0018
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0001 +0.0003 +0.0020
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0009 +0.0017 -0.0015 +0.0008 +0.0007 +0.0010
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0021 +0.0016 +0.0002 +0.0011 +0.0019
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0024 +0.0024 +0.0031 +0.0034 +0.0019 +0.0035
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0007 +0.0051 +0.0040 +0.0048 +0.0038 +0.0072
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0012 +0.0037 +0.0047 +0.0052 +0.0052 +0.0045
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0023 +0.0024 +0.0008 +0.0019 +0.0021
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0014 +0.0018 -0.0000 +0.0001 +0.0012 +0.0017
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0001 +0.0023 +0.0047 +0.0039 +0.0034 +0.0041
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0019 +0.0020 -0.0000 +0.0019 +0.0010 +0.0014
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0000 +0.0039 +0.0041 +0.0019 +0.0030 +0.0044
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0013 +0.0001 +0.0019 -0.0009 -0.0012 +0.0016
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0032 +0.0092 +0.0113 +0.0078 +0.0032 +0.0032
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0044 +0.0144 +0.0112 +0.0099 +0.0091 +0.0091
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0010 +0.0029 +0.0025 -0.0003 +0.0017 +0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0027 +0.0046 +0.0026 +0.0070 +0.0072 +0.0094
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0017 +0.0049 -0.0049 -0.0011 +0.0014 +0.0015
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0071 +0.0091 +0.0093 +0.0062 +0.0099 +0.0089
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0010 +0.0034 +0.0027 +0.0032 +0.0038 +0.0051
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0037 +0.0111 +0.0106
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 12320 -12075 -12268

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 449 -322 -313

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0364 +0.0048 +0.0055

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 -217 -1061 +412

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 19 -171 -37

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 12 +4 +1 +1 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 1 +0 +1 -1 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1677 +0.0218 +0.0256 +0.0276 +0.0303 +0.0302
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1618 +0.0225 +0.0256 +0.0267 +0.0295 +0.0293
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1628 +0.0173 +0.0204 +0.0221 +0.0219
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1540 +0.0009 +0.0130 +0.0164 +0.0184 +0.0185
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1747 +0.0050 +0.0108 +0.0132 +0.0148 +0.0150
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1499 -0.0004 +0.0133 +0.0162 +0.0177 +0.0176
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1537 +0.0057 +0.0038 +0.0042 +0.0032 +0.0031
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5966 +0.0097 +0.0097
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2116 +0.0399 +0.0398

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0859 +0.0096 +0.0120 +0.0132 +0.0138 +0.0101
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0824 +0.0100 +0.0121 +0.0124 +0.0136 +0.0106
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0755 +0.0082 +0.0094 +0.0096 +0.0067
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0660 -0.0118 +0.0057 +0.0068 +0.0072 +0.0059
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0786 -0.0006 +0.0030 +0.0033 +0.0014 +0.0011
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0645 -0.0125 +0.0078 +0.0076 +0.0077 +0.0061
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1016 -0.0013 -0.0004 -0.0021 -0.0011 -0.0017
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5780 -0.0101 -0.0100
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1369 +0.0136 +0.0123

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0101 -0.0020 +0.0070 +0.0012 +0.0000 -0.0675
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0041 -0.0076 +0.0055 -0.0002 -0.0001 -0.0367
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0022 +0.0007 -0.0023 -0.0001 -0.0000 +0.0013
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0601 +0.0012 -0.0008 +0.0020 -0.0002 -0.0665
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0612 -0.0054 -0.0006 -0.0003 +0.0001 -0.0112
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0518 -0.0080 +0.0050 -0.0016 -0.0001 +0.0229
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1281 -0.0059 -0.0059 +0.0211 -0.0012 -0.1071
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0813 +0.0062 +0.0047 -0.0191 -0.0001 +0.0210
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1942 +0.0183 -0.0240 +0.0287 +0.0020 -0.0863
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1048 +0.0048 -0.0054 -0.0067 +0.0002 +0.0163
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0469 +0.0009 +0.0001 -0.0089 -0.0000 +0.0013
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2066 +0.0051 -0.0017 +0.0004 +0.0004 +0.0027
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1351 -0.0032 -0.0062 -0.0160 +0.0006 +0.1120
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0792 +0.0043 -0.0045 -0.0054 -0.0001 -0.0227
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0427 +0.0169 -0.0238 +0.0355 +0 -0.0537
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0138 +0.0009 +0.0076 -0.0005 +0.0006 -0.0602
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0026 -0.0089 +0.0045 +0.0004 +0.0011 -0.0396
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0102 +0.0054 -0.0044 +0.0010 +0.0033 +0.0033
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0598 +0.0013 +0.0005 -0.0055 +0.0004 -0.0613
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0613 -0.0060 -0.0005 -0.0005 -0.0005 -0.0084
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0480 -0.0084 +0.0078 -0.0007 +0.0020 +0.0149
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1563 -0.0077 -0.0028 +0.0144 -0.0004 -0.0645
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0783 +0.0048 +0.0016 -0.0170 -0.0057 +0.0284
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2325 +0.0504 -0.0481 +0.0073 +0.0089 -0.0418
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1038 +0.0031 -0.0032 -0.0081 +0.0006 +0.0273
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0437 +0.0011 -0.0008 -0.0084 -0.0000 +0.0016
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2172 +0.0036 -0.0008 +0.0016 +0.0018 +0.0122
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1152 +0.0005 -0.0096 -0.0297 +0.0070 +0.1036
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0804 +0.0056 -0.0034 -0.0033 +0.0038 -0.0319
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0420 +0.0405 -0.0089 +0.0322 +0.0276 -0.1028
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1405 +0.0343 +0.0202 -0.0086 +0.0005 -0.1678
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1220 +0.0169 -0.0058 +0.0004 +0.0004 -0.0883
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1241 +0.0117 -0.0078 +0.0011 -0.0001 -0.1366
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1453 +0.0441 -0.0007 -0.0136 +0.0007 -0.1533
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1320 +0.0164 -0.0031 -0.0002 +0.0007 -0.0880
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1362 +0.0170 -0.0063 +0.0017 +0.0006 -0.1324
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2215 +0.0445 +0.0761 -0.1281 +0.0017 -0.3511
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0436 -0.0103 +0.0134 -0.0147 -0.0018 -0.1058
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3011 -0.0030 +0.1483 +0.0078 -0.0120 -0.6444
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1819 +0.0037 +0.0045 +0.0051 +0.0002 -0.1688
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0422 +0.0676 -0.0087 -0.0168 +0.0006 -0.1101
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1819 +0.0316 +0.0062 -0.0049 +0.0001 -0.1535
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2269 -0.0093 +0.0378 -0.0706 +0.0033 -0.3532
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0662 +0.0977 -0.0155 +0.0159 +0.0001 -0.1817
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5173 +0.0737 +0.1982 -0.0827 -0.0008 -0.7570
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0734 +0.0149 -0.0182 -0.0054 +0.1015 -0.1489
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0389 +0.0035 +0.0005 +0.0043 +0.0189 -0.0614
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0524 -0.0157 -0.0104 +0.0083 +0.0352 -0.0950
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0542 -0.0042 +0.0002 -0.0084 +0.0711 -0.1365
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0389 +0.0032 -0.0030 +0.0035 +0.0313 -0.0640
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0523 +0.0000 +0.0073 -0.0081 +0.0305 -0.1035
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.1113 +0.0146 +0.0452 -0.0355 +0.0761 -0.1924
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0195 -0.0057 -0.0062 -0.0031 +0.0154 -0.0445
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0600 -0.1294 +0.1626 +0.0090 +0.0813 -0.5218
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0316 -0.0046 +0.0074 +0.0016 +0.0039 -0.0413
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0106 +0.0109 -0.0066 +0.0090 -0.0065 -0.0262
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0370 -0.0053 +0.0093 +0.0025 +0.0083 -0.0537
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0770 -0.0166 +0.0170 -0.0166 +0.0315 -0.1720
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0226 +0.0068 -0.0006 -0.0039 +0.0560 -0.1072
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1984 -0.0891 -0.0032 -0.0082 +0.0618 -0.2938
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 16.6100 -7.4600 -0.7100 -3.2600 -0.5200 -2.4200 -30.9929% -4.0993% -16.4066% -3.0356% -12.7168%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10.1300 -2.6200 +1.0600 +1.7700 +0.8400 +2 -20.5490% +11.6869% +21.1722% +9.0420% +24.6002%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.5200 -2.7900 +0.5600 -0.1400 -1.2900 -0.2700 -22.6645% +6.2500% -1.4493% -11.9334% -2.7579%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.6300 +0.4000 +0.2200 -0.3100 +0.3500 +9.4563% +4.9887% -6.2753% +8.1776%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.9100 -0.4700 +0.5300 +0.1600 +0.3700 +0.3500 -8.7361% +12.1005% +3.3684% +8.1498% +7.6754%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.6500 -0.7800 +0.5100 +0.2100 -0.0100 +0.4100 -14.3646% +12.3188% +4.7297% -0.2146% +9.6698%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.8700 -0.6800 +0.4500 +0.3400 +0.4100 +0.3300 -12.2523% +10.1810% +7.5055% +9.1928% +7.2687%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 14.9300 -12.7300 -4.8300 -3.3900 -4.3500 -2.9700 -46.0231% -24.4433% -18.5044% -22.5622% -16.5922%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.6900 -1.1000 +0.1000 +0.0400 +0.6000 +0.3300 -18.9983% +2.1786% +0.8602% +14.6699% +7.5688%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.1200 -1.1400 +0.7200 -0.7600 +0.1100 -18.2109% +16.3636% -12.9252% +2.1956%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.2100 +0.6900 +1.4800 +0.4100 +1.5700 +1.3800 +15.2655% +39.6783% +8.5417% +43.1319% +36.0313%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.0100 -1.7300 +0.5000 +0.0900 +0.5700 +0.2900 -30.1394% +14.2450% +2.2959% +16.5698% +7.7957%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.1200 -0.9500 +0.5900 +0.6100 +0.3800 +0.6500 -13.4371% +10.6691% +11.0708% +6.6202% +11.8830%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.2600 -1.3300 +0.5300 +0.1200 +0.7200 +0.3700 -17.5231% +9.2496% +1.9544% +12.9964% +6.2818%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.4500 -1 +0.7800 +1.1500 +1.0400 +1.0300 -15.5039% +16.7024% +26.7442% +23.5828% +23.3032%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.8300 -1.5500 +0.9000 +1.2000 +0.2100 +0.8700 -21.0027% +18.2556% +25.9179% +3.7367% +17.5403%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.2800 -0.4600 +0.6200 +0.8900 +0.6900 -9.7046% +16.9399% +26.2537% +19.2201%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.5700 -0.6900 +0.7300 +0.8100 +0.5100 -13.1179% +19.0104% +21.5426% +12.5616%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.2700 -0.3800 +0.8400 +0.5600 +0.8200 +0.7200 -8.1720% +24.4898% +15.0943% +23.7681% +20.2817%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.2800 +0.1100 +0.9900 +0.5900 +1.0100 +0.7600 +2.6379% +30.0912% +15.9892% +30.8869% +21.5909%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.2500 -1.0300 +0.7200 +0.6500 +0.7600 +0.5500 -19.5076% +20.3966% +18.0556% +21.7765% +14.8649%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.5000 -1.0100 +0.6800 +0.3500 -0.3100 +0.4700 -18.3303% +17.8010% +8.4337% -6.4449% +11.6625%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.4600 -0.2700 +1 +0.8900 +0.6900 -5.7082% +28.9017% +24.9300% +18.3024%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.6400 -0.0100 +1.0200 +0.9100 +0.8600 +1.1400 -0.2151% +28.1768% +24.3968% +22.7513% +32.5714%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.7900 -1.2500 +1.2400 +1.6900 +0.5800 -13.8274% +18.9313% +27.7049% +8.0444%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.7200 +1.2500 +1.5800 +0.1400 +0.5000 +27.9642% +38.1643% +2.5090% +9.5785%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 21.6000 -4.5800 -2.6800 -17.4943% -11.0379%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 11.3500 -1.5600 -1.0700 -12.0837% -8.6151%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 12.3600 +0.3000 -2.0500 +2.4876% -14.2262%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 32.1700 +4.6600 +3.8900 +16.9393% +13.7553%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 32.5100 +4.8400 +4.0100 +17.4919% +14.0702%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png