Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1342874 +246380 +35869 +30919 +49333 +49333 +22.4698% +2.7444% +2.3567% +3.8138% +3.8138%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 653728 +67406 +37966 +43018 +53847 +53847 +11.4964% +6.1657% +7.0439% +8.9763% +8.9763%
MTAC_3P_Standard 596590 623022 617574 607435 607435 659697 +63107 +36675 +42123 +52262 +52262 +10.5780% +5.8866% +6.8207% +8.6037% +8.6037%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 155141 +17593 +18302 +19581 +19581 +12.7904% +13.3748% +14.4445% +14.4445%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 174548 +18907 +17997 +18039 +19513 +19704 +12.1478% +11.4959% +11.5259% +12.5862% +12.7251%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 157276 +18767 +17891 +17984 +19391 +19489 +13.5493% +12.8357% +12.9110% +14.0632% +14.1443%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 175556 +16594 +16824 +16396 +17634 +17634 +10.4390% +10.5990% +10.3016% +11.1663% +11.1663%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1329801 +307065 +175132 +205928 +145717 +145717 +30.0239% +15.1673% +18.3231% +12.3063% +12.3063%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 55169 +14287 +13469 +12744 +13069 +13069 +34.9469% +32.2998% +30.0389% +31.0428% +31.0428%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 53276 +12207 +10874 +11253 +12124 +12124 +29.7231% +25.6450% +26.7782% +29.4615% +29.4615%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 43053 +34313 +19938 +20038 +20140 +20140 +392.5973% +86.2557% +87.0650% +87.8977% +87.8977%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 30699 +13764 +13146 +12290 +12351 +12351 +81.2755% +74.8932% +66.7608% +67.3152% +67.3152%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 119685 +19777 +16794 +20702 +21037 +21037 +19.7952% +16.3221% +20.9147% +21.3253% +21.3253%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 87692 +16594 +14964 +16247 +16566 +16566 +23.3396% +20.5753% +22.7406% +23.2911% +23.2911%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 126191 +20487 +19694 +20569 +21757 +21679 +19.3815% +18.4925% +19.4742% +20.8333% +20.7431%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 133504 +18347 +16188 +19182 +20423 +20254 +15.9322% +13.7986% +16.7789% +18.0605% +17.8843%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 19867 +9673 +9061 +8629 +8634 +8634 +94.8892% +83.8516% +76.7841% +76.8628% +76.8628%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 21088 +6281 +5655 +5047 +5389 +5389 +42.4191% +36.6423% +31.4631% +34.3270% +34.3270%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8633 +7372 +6601 +6183 +6247 +6247 +584.6154% +324.8524% +252.3673% +261.8189% +261.8189%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14814 +13378 +10031 +9124 +9083 +9083 +931.6156% +209.7219% +160.3515% +158.4889% +158.4889%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 32312 +10602 +10417 +9732 +9849 +9849 +48.8346% +47.5771% +43.1001% +43.8454% +43.8454%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 32638 +6778 +6495 +6378 +7013 +7013 +26.2104% +24.8441% +24.2879% +27.3678% +27.3678%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 19860 +16376 +12962 +13026 +13026 +470.0344% +187.9095% +190.6058% +190.6058%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 29425 +18726 +17951 +16543 +16536 +16536 +175.0257% +156.4494% +128.4195% +128.2954% +128.2954%
SCP_Astral_MBR 92167 93585 91884 90864 90838 110453 +18286 +16868 +18569 +19589 +19615 +19.8401% +18.0243% +20.2092% +21.5586% +21.5934%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 60043 +3344 +4250 +4152 +4152 +5.8978% +7.6174% +7.4287% +7.4287%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1917324 +141196 +141978 +7.9497% +7.9972%
EWZ_2P_MBR_Exploris_Human 836809 836809 904658 +67849 +67849 +8.1081% +8.1081%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1008590 +93666 +94641 +10.2376% +10.3552%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2296330 +218296 +218294 +10.5049% +10.5048%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2296330 +218296 +218294 +10.5049% +10.5048%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 150379 +38875 +16760 +19020 +18348 +18348 +34.8642% +12.5431% +14.4794% +13.8967% +13.8967%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 126360 +18093 +9008 +11701 +11544 +11544 +16.7115% +7.6761% +10.2050% +10.0543% +10.0543%
MTAC_3P_Standard 110265 118693 115800 116148 116148 128030 +17765 +9337 +12230 +11882 +11882 +16.1112% +7.8665% +10.5613% +10.2301% +10.2301%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 58399 +9541 +9367 +9404 +9404 +19.5280% +19.1039% +19.1938% +19.1938%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 64553 +10584 +9478 +8713 +8669 +8732 +19.6113% +17.2093% +15.6035% +15.5125% +15.6429%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 59482 +10861 +9817 +9193 +9022 +9067 +22.3381% +19.7664% +18.2803% +17.8795% +17.9847%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 65057 +9997 +9138 +8350 +8230 +8230 +18.1566% +16.3415% +14.7248% +14.4826% +14.4826%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 73761 +22489 +14977 +18714 +15168 +15196 +43.8621% +25.4780% +33.9964% +25.8871% +25.9472%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21078 +6638 +6120 +5829 +5371 +5371 +45.9695% +40.9146% +38.2255% +34.1949% +34.1949%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20044 +5561 +4979 +5128 +4974 +4972 +38.3967% +33.0501% +34.3792% +33.0060% +32.9883%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 17579 +8839 +8203 +8190 +8215 +8194 +101.1327% +87.4893% +87.2297% +87.7296% +87.3095%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17701 +8803 +8442 +7917 +7891 +7891 +98.9323% +91.1762% +80.9178% +80.4383% +80.4383%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 43311 +8446 +7014 +8969 +8886 +8886 +24.2249% +19.3239% +26.1167% +25.8126% +25.8126%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32224 +7575 +6758 +7105 +7001 +7001 +30.7315% +26.5373% +28.2854% +27.7564% +27.7564%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 46610 +9922 +8934 +8961 +9189 +9151 +27.0443% +23.7127% +23.8014% +24.5557% +24.4294%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 48446 +8290 +6901 +8403 +8553 +8500 +20.6445% +16.6109% +20.9849% +21.4399% +21.2787%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8017 +4351 +4068 +3808 +3771 +3771 +118.6852% +103.0134% +90.4728% +88.8130% +88.8130%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8412 +3113 +2801 +2557 +2346 +2345 +58.7469% +49.9198% +43.6721% +38.6746% +38.6517%
SCP_Astral_250pg_3ms 675 721 908 879 879 4027 +3352 +3306 +3119 +3148 +3148 +496.5926% +458.5298% +343.5022% +358.1342% +358.1342%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6204 +4768 +4466 +4059 +4041 +4039 +332.0334% +256.9620% +189.2308% +186.8239% +186.5589%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12835 +5041 +4863 +4583 +4429 +4427 +64.6780% +61.0010% +55.5381% +52.6886% +52.6522%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12711 +3553 +3369 +3340 +3297 +3296 +38.7967% +36.0629% +35.6419% +35.0223% +35.0080%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8699 +6853 +6099 +6113 +6110 +371.2351% +234.5769% +236.3882% +235.9985%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 11849 +7975 +7694 +7075 +7044 +7045 +205.8596% +185.1745% +148.1986% +146.5973% +146.6486%
SCP_Astral_MBR 24110 24991 24570 24544 24527 30815 +6705 +5824 +6245 +6271 +6288 +27.8100% +23.3044% +25.4172% +25.5500% +25.6371%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 60043 +3344 +4250 +4152 +4152 +5.8978% +7.6174% +7.4287% +7.4287%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 62488 +7217 +7341 +13.0575% +13.3117%
EWZ_2P_MBR_Exploris_Human 48465 48473 54417 +5952 +5944 +12.2810% +12.2625%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 58714 +7468 +7537 +14.5728% +14.7273%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 79514 +6236 +6237 +8.5101% +8.5115%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 79514 +6236 +6237 +8.5101% +8.5115%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91825 +3905 -1063 -2157 -1616 -2461 +4.4415% -1.1444% -2.2951% -1.7294% -2.6101%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67481 +3708 +3507 +3870 +4466 +1646 +5.8144% +5.4819% +6.0839% +7.0872% +2.5002%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68001 +3684 +3537 +3782 +4616 +2034 +5.7279% +5.4868% +5.8892% +7.2825% +3.0834%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12989 +922 +1019 +1049 +750 +7.6407% +8.5129% +8.7856% +6.1280%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13231 +799 +760 +869 +903 +571 +6.4270% +6.0941% +7.0296% +7.3248% +4.5103%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12819 +811 +772 +859 +851 +639 +6.7538% +6.4082% +7.1823% +7.1106% +5.2463%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13333 +772 +868 +856 +923 +559 +6.1460% +6.9635% +6.8606% +7.4376% +4.3761%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 159897 +13673 +6363 +5907 +4070 +2611 +9.3507% +4.1444% +3.8360% +2.6119% +1.6600%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11840 +2677 +2312 +2255 +2506 +1818 +29.2153% +24.2653% +23.5263% +26.8481% +18.1401%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11638 +2340 +1877 +2226 +2085 +1649 +25.1667% +19.2296% +23.6507% +21.8256% +16.5082%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9654 +7204 +3570 +3407 +3538 +3305 +294.0408% +58.6785% +54.5382% +57.8483% +52.0554%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6772 +2069 +2184 +1814 +1849 +1823 +43.9932% +47.6024% +36.5873% +37.5584% +36.8357%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17702 +1512 +1422 +1677 +1647 +1166 +9.3391% +8.7346% +10.4649% +10.2585% +7.0513%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15192 +1593 +1351 +1504 +1521 +1208 +11.7141% +9.7609% +10.9877% +11.1257% +8.6384%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17997 +1745 +1721 +1880 +2072 +1539 +10.7371% +10.5739% +11.6647% +13.0110% +9.3511%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18679 +1662 +1501 +1766 +1934 +1330 +9.7667% +8.7379% +10.4417% +11.5497% +7.6661%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5529 +1882 +1616 +1665 +1990 +1715 +51.6041% +41.2982% +43.0901% +56.2306% +44.9659%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6098 +1798 +1495 +1301 +1121 +929 +41.8140% +32.4788% +27.1211% +22.5236% +17.9725%
SCP_Astral_250pg_3ms 576 22 936 741 736 2878 +2302 +2856 +1942 +2137 +2142 +399.6528% +12981.8182% +207.4786% +288.3941% +291.0326%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4507 +3870 +2427 +2478 +2461 +2439 +607.5353% +116.6827% +122.1291% +120.2835% +117.9400%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7787 +1542 +1441 +1771 +1660 +1568 +24.6918% +22.7072% +29.4382% +27.0932% +25.2131%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8244 +1522 +1515 +1232 +1221 +902 +22.6421% +22.5145% +17.5699% +17.3857% +12.2855%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5351 +4369 +2986 +3174 +3115 +444.9084% +126.2579% +145.7970% +139.3113%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7501 +3793 +3494 +3456 +3583 +3398 +102.2923% +87.1974% +85.4388% +91.4497% +82.8175%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21083 +918 +954 +1009 +1290 +1185 +4.5524% +4.7394% +5.0264% +6.5175% +5.9554%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5022 +337 +322 +390 +283 +7.1932% +6.8511% +8.4197% +5.9717%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 251322 +6063 +3900 +2.4721% +1.5763%
EWZ_2P_MBR_Exploris_Human 115447 117345 116485 +1038 -860 +0.8991% -0.7329%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 134359 +5391 +3653 +4.1801% +2.7948%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 190067 +11893 +6524 +6.6749% +3.5545%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 190067 +11893 +6524 +6.6749% +3.5545%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8444 +599 +269 +289 +241 +195 +7.6354% +3.2905% +3.5438% +2.9379% +2.3639%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12262 +901 +768 +911 +924 +464 +7.9306% +6.6817% +8.0257% +8.1496% +3.9329%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12370 +897 +810 +893 +974 +538 +7.8184% +7.0069% +7.7808% +8.5469% +4.5470%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4492 +364 +400 +392 +309 +8.8178% +9.7752% +9.5610% +7.3870%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4565 +350 +317 +347 +351 +228 +8.3037% +7.4623% +8.2266% +8.3294% +5.2571%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4409 +334 +275 +319 +312 +224 +8.1963% +6.6522% +7.7995% +7.6153% +5.3524%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4581 +332 +344 +337 +350 +227 +7.8136% +8.1190% +7.9406% +8.2723% +5.2136%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8177 +922 +595 +837 +698 +640 +12.7085% +7.8475% +11.4033% +9.3328% +8.4914%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4304 +1059 +915 +893 +986 +743 +32.6348% +26.9991% +26.1800% +29.7167% +20.8649%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4192 +938 +759 +901 +758 +700 +28.8261% +22.1089% +27.3777% +22.0734% +20.0458%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3633 +1183 +1237 +1183 +1236 +1199 +48.2857% +51.6277% +48.2857% +51.5645% +49.2605%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3658 +1150 +1222 +1024 +1016 +1075 +45.8533% +50.1642% +38.8762% +38.4557% +41.6183%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6179 +600 +523 +675 +633 +525 +10.7546% +9.2468% +12.2638% +11.4136% +9.2855%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5327 +606 +489 +544 +516 +483 +12.8363% +10.1075% +11.3736% +10.7254% +9.9711%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6345 +734 +690 +749 +792 +632 +13.0814% +12.2016% +13.3846% +14.2626% +11.0625%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6525 +679 +576 +682 +720 +560 +11.6148% +9.6823% +11.6721% +12.4031% +9.3881%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2106 +814 +682 +700 +818 +747 +63.0031% +47.8933% +49.7866% +63.5093% +54.9669%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2274 +706 +614 +516 +401 +404 +45.0255% +36.9880% +29.3515% +21.4095% +21.6043%
SCP_Astral_250pg_3ms 307 8 350 283 281 1187 +880 +1179 +837 +904 +906 +286.6450% +14737.5000% +239.1429% +319.4346% +322.4199%
SCP_Astral_250pg_6ms 637 756 751 766 767 1714 +1077 +958 +963 +948 +947 +169.0738% +126.7196% +128.2290% +123.7598% +123.4681%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2861 +654 +586 +692 +631 +644 +29.6330% +25.7582% +31.9041% +28.2960% +29.0483%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3031 +628 +643 +554 +492 +433 +26.1340% +26.9263% +22.3658% +19.3777% +16.6667%
SCP_Astral_500pg_3ms 525 902 828 835 2068 +1543 +1166 +1240 +1233 +293.9048% +129.2683% +149.7585% +147.6647%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2788 +1470 +1341 +1302 +1353 +1320 +111.5326% +92.6745% +87.6178% +94.2857% +89.9183%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5179 +471 +459 +467 +464 +463 +10.0042% +9.7246% +9.9109% +9.8409% +9.8176%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5022 +337 +322 +390 +283 +7.1932% +6.8511% +8.4197% +5.9717%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7389 +348 +283 +4.9425% +3.9825%
EWZ_2P_MBR_Exploris_Human 6167 6284 6322 +155 +38 +2.5134% +0.6047%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7382 +495 +419 +7.1875% +6.0175%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6328 +524 +373 +9.0283% +6.2636%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6328 +524 +373 +9.0283% +6.2636%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91809 -2470
MTAC_3P_Alternating 65832 67481 +1649
MTAC_3P_Standard 65967 67996 +2029
MTAC_Yeast_Alternating_3min 12239 12981 +742
MTAC_Yeast_Alternating_5min 12660 13228 +568
MTAC_Yeast_Standard_3min 12180 12817 +637
MTAC_Yeast_Standard_5min 12772 13328 +556
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 159886 +2601
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11833 +1811
SCP_Astral_1000pg_24ms 9989 11638 +1649
SCP_Astral_1000pg_3ms 6349 9649 +3300
SCP_Astral_1000pg_6ms 4949 6764 +1815
SCP_Astral_10ng_12ms 16536 17698 +1162
SCP_Astral_10ng_24ms 13982 15192 +1210
SCP_Astral_10ng_3ms 16458 17986 +1528
SCP_Astral_10ng_6ms 17349 18673 +1324
SCP_Astral_250pg_12ms 3814 5529 +1715
SCP_Astral_250pg_24ms 5169 6098 +929
SCP_Astral_250pg_3ms 736 2875 +2139
SCP_Astral_250pg_6ms 2066 4507 +2441
SCP_Astral_500pg_12ms 6219 7786 +1567
SCP_Astral_500pg_24ms 7342 8244 +902
SCP_Astral_500pg_3ms 2234 5349 +3115
SCP_Astral_500pg_6ms 4103 7501 +3398
SCP_Astral_MBR 19891 21083 +1192
Seer_Astral_45 242898
Seer_Astral_single 4739 5022 +283
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 251309 +3887
EWZ_2P_MBR_Exploris_Human 117340 116471 -869
EWZ_2P_MBR_Exploris_YeastHuman 130702 134344 +3642
MacCoss_Eclipse_Normalization_noNorm 183540 190067 +6527
MacCoss_Eclipse_Normalization_yesNorm 183540 190067 +6527

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0009 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0001 +0.0005 +0.0005
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0002 +0.0003 -0.0001 +0.0008 +0.0005 +0.0005
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0005 +0.0009 -0.0009 +0.0001 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0010 +0.0006 +0.0009 +0.0016 +0.0016
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0004 -0.0000 +0.0008 +0.0010 +0.0011 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0004 +0.0015 +0.0010 +0.0009 +0.0017 +0.0017
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0002 +0.0012 +0.0021 +0.0026 +0.0027
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0001 -0.0005 -0.0005
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0005 +0.0006 +0.0002 +0.0016 -0.0000 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0011 +0.0012 +0.0019 +0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0014 +0.0068 +0.0047 +0.0046 +0.0060 +0.0060
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0013 +0.0043 +0.0061 +0.0042 +0.0051 +0.0059
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0020 +0.0022 +0.0031 +0.0056 +0.0046 +0.0046
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0001 +0.0023 +0.0018 +0.0025 +0.0025
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0006 +0.0027 -0.0002 +0.0021 +0.0019 +0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0019 +0.0043 +0.0045 +0.0037 +0.0037 +0.0037
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0007 +0.0015 +0.0006 +0.0028 +0.0019 +0.0019
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0035 +0.0074 +0.0076 +0.0033 +0.0088 +0.0088
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0019 +0.0021 +0.0031 +0.0043 +0.0050 +0.0050
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0054 +0.0122 +0.0054 +0.0054
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0024 +0.0075 +0.0050 +0.0073 +0.0068
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0014 +0.0035 +0.0024 +0.0041 +0.0040 +0.0040
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0022 +0.0034 +0.0046 +0.0034 +0.0033 +0.0033
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0023 +0.0036 +0.0045 +0.0058 +0.0058
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0042 +0.0073 +0.0075 +0.0057 +0.0057
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0016 +0.0043 +0.0036 +0.0031 +0.0038 +0.0038
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0008 +0.0030 +0.0030
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0001 +0.0025 +0.0026
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0004 +0.0026 +0.0010
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0021 -0.0011 -0.0010 -0.0026 -0.0028 -0.0010
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0012 +0.0001 +0.0013 +0.0017 +0.0014 +0.0031
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 0.0016 +0.0082 +0.0069 +0.0064 +0.0060
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0007 +0.0048 +0.0045 +0.0055 +0.0040 +0.0064
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0042 +0.0016 +0.0005 -0.0022 -0.0014 -0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0020 +0.0016 +0.0025 +0.0036 +0.0034
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0008 -0.0006 +0.0022
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 0.0003 +0.0032 +0.0004 +0.0031 +0.0011 +0.0020
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0035 +0.0014 +0.0006 +0.0007 +0.0005
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0030 +0.0040 +0.0028 +0.0040 +0.0040 +0.0053
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0038 +0.0097 +0.0097 +0.0110 +0.0110 +0.0125
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0034 +0.0052 +0.0083 +0.0077 +0.0079 +0.0080
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0034 +0.0020 +0.0005 +0.0019 +0.0026
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0012 +0.0020 +0.0011 +0.0004 +0.0033 +0.0024
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0007 +0.0030 +0.0067 +0.0060 +0.0054 +0.0054
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0000 +0.0054 +0.0020 +0.0054 +0.0046 +0.0049
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0028 +0.0081 +0.0104 +0.0062 +0.0092 +0.0089
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0005 +0.0047 +0.0047 +0.0031 +0.0018 +0.0048
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0063 +0.0091 +0.0063 +0.0149 +0.0063 +0.0063
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0083 +0.0181 +0.0149 +0.0167 +0.0170 +0.0171
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0004 +0.0032 +0.0036 -0.0018 +0.0017 +0.0020
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0052 +0.0072 +0.0053 +0.0103 +0.0113 +0.0112
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0071 +0.0113 +0.0000 +0.0051 +0.0072 +0.0073
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0086 +0.0130 +0.0131 +0.0093 +0.0141 +0.0128
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0019 +0.0078 +0.0048 +0.0044 +0.0069 +0.0075
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0018 +0.0092 +0.0091
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0007 +0.0006 +0.0006
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0001 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0004 +0.0005 +0.0001 +0.0006 +0.0005 +0.0005
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0001 +0.0010 -0.0001 +0.0005 +0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0005 +0.0004 +0.0008 +0.0009 +0.0009
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0002 +0.0006 +0.0010 +0.0012 +0.0010 +0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0001 +0.0010 +0.0009 +0.0009 +0.0012 +0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0002 +0.0010 +0.0012 +0.0017 +0.0017
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0005 +0.0003 +0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0006 +0.0011 +0.0001 +0.0013 +0.0007 +0.0007
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0005 +0.0010 +0.0024 +0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0011 +0.0056 +0.0039 +0.0041 +0.0048 +0.0048
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0021 +0.0042 +0.0051 +0.0047 +0.0048 +0.0055
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0020 +0.0018 +0.0025 +0.0047 +0.0044 +0.0044
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0001 +0.0018 +0.0011 +0.0017 +0.0017
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0003 +0.0017 -0.0001 +0.0015 +0.0011 +0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0014 +0.0034 +0.0035 +0.0030 +0.0029 +0.0029
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0001 +0.0006 -0.0001 +0.0013 +0.0009 +0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0028 +0.0058 +0.0054 +0.0030 +0.0059 +0.0059
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0015 +0.0022 +0.0023 +0.0028 +0.0029 +0.0029
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0034 +0.0093 +0.0034 +0.0034
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0035 +0.0072 +0.0056 +0.0065 +0.0065
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0017 +0.0035 +0.0020 +0.0037 +0.0030 +0.0030
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0023 +0.0039 +0.0040 +0.0040 +0.0039 +0.0039
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0038 +0.0019 +0.0042 +0.0054 +0.0054
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0047 +0.0072 +0.0066 +0.0056 +0.0056
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0018 +0.0036 +0.0033 +0.0026 +0.0031 +0.0031
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0008 +0.0030 +0.0030
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0009 +0.0021 +0.0023
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0006 +0.0010 -0.0000
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0007 -0.0006 -0.0005 -0.0010 -0.0010 -0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0006 +0.0003 +0.0008 +0.0015 +0.0013 +0.0018
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0019 +0.0055 +0.0052 +0.0048 +0.0040
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0016 +0.0053 +0.0037 +0.0040 +0.0029 +0.0041
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0020 +0.0018 +0.0015 -0.0007 -0.0005 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0013 +0.0010 +0.0014 +0.0024 +0.0021
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0002 +0.0003 +0.0019
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0001 +0.0026 -0.0007 +0.0016 +0.0015 +0.0018
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0019 +0.0019 +0.0004 +0.0014 +0.0021
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0004 +0.0045 +0.0052 +0.0054 +0.0039 +0.0056
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0025 +0.0069 +0.0058 +0.0066 +0.0056 +0.0089
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0020 +0.0045 +0.0055 +0.0060 +0.0060 +0.0053
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0025 +0.0022 +0.0006 +0.0017 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0003 +0.0029 +0.0011 +0.0012 +0.0023 +0.0028
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0010 +0.0011 +0.0036 +0.0028 +0.0023 +0.0030
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0007 +0.0031 +0.0011 +0.0031 +0.0022 +0.0026
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0013 +0.0051 +0.0054 +0.0032 +0.0043 +0.0057
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0008 +0.0021 +0.0040 +0.0011 +0.0009 +0.0037
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0031 +0.0091 +0.0112 +0.0077 +0.0031 +0.0031
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0071 +0.0171 +0.0139 +0.0126 +0.0118 +0.0118
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0013 +0.0053 +0.0048 +0.0020 +0.0040 +0.0035
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0044 +0.0063 +0.0043 +0.0087 +0.0088 +0.0111
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0060 +0.0092 -0.0006 +0.0032 +0.0057 +0.0058
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0073 +0.0093 +0.0095 +0.0064 +0.0101 +0.0091
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0026 +0.0050 +0.0044 +0.0049 +0.0055 +0.0067
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0022 +0.0096 +0.0090
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 4076 -20319 -20512

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 386 -385 -376

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0947 +0.0631 +0.0637

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 478 -366 +1107

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 41 -149 -15

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0.0858 -0.1393 +0.0858

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 13 +4 +1 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1677 +0.0218 +0.0256 +0.0277 +0.0303 +0.0302
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1616 +0.0223 +0.0254 +0.0265 +0.0293 +0.0291
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1654 +0.0199 +0.0230 +0.0246 +0.0245
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1555 +0.0024 +0.0145 +0.0179 +0.0199 +0.0200
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1751 +0.0053 +0.0112 +0.0136 +0.0152 +0.0153
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1516 +0.0013 +0.0149 +0.0179 +0.0193 +0.0192
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1540 +0.0060 +0.0041 +0.0045 +0.0035 +0.0034
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5965 +0.0096 +0.0096
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2120 +0.0404 +0.0403

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0850 +0.0087 +0.0111 +0.0123 +0.0130 +0.0092
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0817 +0.0094 +0.0114 +0.0117 +0.0129 +0.0099
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0750 +0.0077 +0.0089 +0.0091 +0.0063
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0667 -0.0111 +0.0064 +0.0075 +0.0079 +0.0066
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0795 +0.0003 +0.0039 +0.0042 +0.0022 +0.0020
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0639 -0.0131 +0.0072 +0.0070 +0.0071 +0.0056
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1016 -0.0012 -0.0003 -0.0020 -0.0011 -0.0017
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5786 -0.0095 -0.0094
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1361 +0.0128 +0.0115

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0105 -0.0020 +0.0070 +0.0012 +0.0000 -0.0672
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0032 -0.0076 +0.0055 -0.0002 -0.0001 -0.0375
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0007 +0.0007 -0.0023 -0.0001 -0.0000 -0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0618 +0.0012 -0.0008 +0.0020 -0.0002 -0.0648
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0608 -0.0054 -0.0006 -0.0003 +0.0001 -0.0116
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0512 -0.0080 +0.0050 -0.0016 -0.0001 +0.0223
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1263 -0.0059 -0.0059 +0.0211 -0.0012 -0.1090
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0820 +0.0062 +0.0047 -0.0191 -0.0001 +0.0216
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1952 +0.0183 -0.0240 +0.0287 +0.0020 -0.0853
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1041 +0.0048 -0.0054 -0.0067 +0.0002 +0.0156
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0472 +0.0009 +0.0001 -0.0089 -0.0000 +0.0016
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2068 +0.0051 -0.0017 +0.0004 +0.0004 +0.0029
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1384 -0.0032 -0.0062 -0.0160 +0.0006 +0.1153
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0794 +0.0043 -0.0045 -0.0054 -0.0001 -0.0225
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0405 +0.0169 -0.0238 +0.0355 +0 -0.0560
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0187 +0.0009 +0.0076 -0.0005 +0.0006 -0.0553
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0020 -0.0089 +0.0045 +0.0004 +0.0011 -0.0402
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0084 +0.0054 -0.0044 +0.0010 +0.0033 +0.0015
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0628 +0.0013 +0.0005 -0.0055 +0.0004 -0.0583
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0611 -0.0060 -0.0005 -0.0005 -0.0005 -0.0085
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0500 -0.0084 +0.0078 -0.0007 +0.0020 +0.0169
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1591 -0.0077 -0.0028 +0.0144 -0.0004 -0.0617
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0766 +0.0048 +0.0016 -0.0170 -0.0057 +0.0266
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2431 +0.0504 -0.0481 +0.0073 +0.0089 -0.0312
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1036 +0.0031 -0.0032 -0.0081 +0.0006 +0.0271
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0442 +0.0011 -0.0008 -0.0084 -0.0000 +0.0021
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2178 +0.0036 -0.0008 +0.0016 +0.0018 +0.0128
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1074 +0.0005 -0.0096 -0.0297 +0.0070 +0.0958
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0794 +0.0056 -0.0034 -0.0033 +0.0038 -0.0328
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0507 +0.0405 -0.0089 +0.0322 +0.0276 -0.0942
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1364 +0.0343 +0.0202 -0.0086 +0.0005 -0.1719
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1219 +0.0169 -0.0058 +0.0004 +0.0004 -0.0884
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1271 +0.0117 -0.0078 +0.0011 -0.0001 -0.1337
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1419 +0.0441 -0.0007 -0.0136 +0.0007 -0.1567
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1335 +0.0164 -0.0031 -0.0002 +0.0007 -0.0865
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1366 +0.0170 -0.0063 +0.0017 +0.0006 -0.1320
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2151 +0.0445 +0.0761 -0.1281 +0.0017 -0.3575
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0430 -0.0103 +0.0134 -0.0147 -0.0018 -0.1064
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2596 -0.0030 +0.1483 +0.0078 -0.0120 -0.6859
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1834 +0.0037 +0.0045 +0.0051 +0.0002 -0.1673
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0428 +0.0676 -0.0087 -0.0168 +0.0006 -0.1095
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1834 +0.0316 +0.0062 -0.0049 +0.0001 -0.1520
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2398 -0.0093 +0.0378 -0.0706 +0.0033 -0.3402
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0692 +0.0977 -0.0155 +0.0159 +0.0001 -0.1788
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5327 +0.0737 +0.1982 -0.0827 -0.0008 -0.7416
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0663 +0.0149 -0.0182 -0.0054 +0.1015 -0.1559
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0385 +0.0035 +0.0005 +0.0043 +0.0189 -0.0619
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0487 -0.0157 -0.0104 +0.0083 +0.0352 -0.0987
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0523 -0.0042 +0.0002 -0.0084 +0.0711 -0.1383
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0390 +0.0032 -0.0030 +0.0035 +0.0313 -0.0639
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0519 +0.0000 +0.0073 -0.0081 +0.0305 -0.1039
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0488 +0.0146 +0.0452 -0.0355 +0.0761 -0.2549
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0164 -0.0057 -0.0062 -0.0031 +0.0154 -0.0476
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0671 -0.1294 +0.1626 +0.0090 +0.0813 -0.5147
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0323 -0.0046 +0.0074 +0.0016 +0.0039 -0.0407
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0102 +0.0109 -0.0066 +0.0090 -0.0065 -0.0266
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0398 -0.0053 +0.0093 +0.0025 +0.0083 -0.0509
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0613 -0.0166 +0.0170 -0.0166 +0.0315 -0.1877
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0221 +0.0068 -0.0006 -0.0039 +0.0560 -0.1077
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1704 -0.0891 -0.0032 -0.0082 +0.0618 -0.3218
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 22.4100 -1.6600 +5.0900 +2.5400 +5.2800 +3.3800 -6.8966% +29.3880% +12.7831% +30.8231% +17.7614%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.2100 -3.5400 +0.1400 +0.8500 -0.0800 +1.0800 -27.7647% +1.5436% +10.1675% -0.8611% +13.2841%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 8.6400 -3.6700 -0.3200 -1.0200 -2.1700 -1.1500 -29.8132% -3.5714% -10.5590% -20.0740% -11.7467%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.4200 +0.1900 +0.0100 -0.5200 +0.1400 +4.4917% +0.2268% -10.5263% +3.2710%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.6500 -0.7300 +0.2700 -0.1000 +0.1100 +0.0900 -13.5688% +6.1644% -2.1053% +2.4229% +1.9737%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.6100 +0.1800 +1.4700 +1.1700 +0.9500 +1.3700 +3.3149% +35.5072% +26.3514% +20.3863% +32.3113%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.6700 -0.8800 +0.2500 +0.1400 +0.2100 +0.1300 -15.8559% +5.6561% +3.0905% +4.7085% +2.8634%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 16.2000 -11.4600 -3.5600 -2.1200 -3.0800 -1.7000 -41.4317% -18.0162% -11.5721% -15.9751% -9.4972%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.3600 -0.4300 +0.7700 +0.7100 +1.2700 +1 -7.4266% +16.7756% +15.2688% +31.0513% +22.9358%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 4.9700 -1.2900 +0.5700 -0.9100 -0.0400 -20.6070% +12.9545% -15.4762% -0.7984%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.7300 +1.2100 +2.0000 +0.9300 +2.0900 +1.9000 +26.7699% +53.6193% +19.3750% +57.4176% +49.6084%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 5.1000 -0.6400 +1.5900 +1.1800 +1.6600 +1.3800 -11.1498% +45.2991% +30.1020% +48.2558% +37.0968%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.7800 -0.2900 +1.2500 +1.2700 +1.0400 +1.3100 -4.1018% +22.6040% +23.0490% +18.1185% +23.9488%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.5700 -1.0200 +0.8400 +0.4300 +1.0300 +0.6800 -13.4387% +14.6597% +7.0033% +18.5921% +11.5450%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 7.0800 +0.6300 +2.4100 +2.7800 +2.6700 +2.6600 +9.7674% +51.6060% +64.6512% +60.5442% +60.1810%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.9600 -0.4200 +2.0300 +2.3300 +1.3400 +2 -5.6911% +41.1765% +50.3240% +23.8434% +40.3226%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.2900 -0.4500 +0.6300 +0.9000 +0.7000 -9.4937% +17.2131% +26.5487% +19.4986%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.4600 -0.8000 +0.6200 +0.7000 +0.4000 -15.2091% +16.1458% +18.6170% +9.8522%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.0200 -0.6300 +0.5900 +0.3100 +0.5700 +0.4700 -13.5484% +17.2012% +8.3558% +16.5217% +13.2394%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 5.0900 +0.9200 +1.8000 +1.4000 +1.8200 +1.5700 +22.0624% +54.7112% +37.9404% +55.6575% +44.6023%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.2600 -1.0200 +0.7300 +0.6600 +0.7700 +0.5600 -19.3182% +20.6799% +18.3333% +22.0630% +15.1351%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.8500 -0.6600 +1.0300 +0.7000 +0.0400 +0.8200 -11.9782% +26.9634% +16.8675% +0.8316% +20.3474%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.2900 -0.4400 +0.8300 +0.7200 +0.5200 -9.3023% +23.9884% +20.1681% +13.7931%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.3200 +0.6700 +1.7000 +1.5900 +1.5400 +1.8200 +14.4086% +46.9613% +42.6273% +40.7407% +52.0000%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.3300 -1.7100 +0.7800 +1.2300 +0.1200 -18.9159% +11.9084% +20.1639% +1.6644%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.4700 +1 +1.3300 -0.1100 +0.2500 +22.3714% +32.1256% -1.9713% +4.7893%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 23.2600 -2.9200 -1.0200 -11.1536% -4.2010%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.8900 -0.0200 +0.4700 -0.1549% +3.7842%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 14.2900 +2.2300 -0.1200 +18.4909% -0.8328%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 37 +9.4900 +8.7200 +34.4965% +30.8345%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 38.1600 +10.4900 +9.6600 +37.9111% +33.8947%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png