Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1351652 +255158 +44647 +39697 +58111 +58111 +23.2704% +3.4160% +3.0258% +4.4924% +4.4924%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 660287 +73965 +44525 +49577 +60406 +60406 +12.6151% +7.2309% +8.1179% +10.0697% +10.0697%
MTAC_3P_Standard 596590 623022 617574 607435 607435 665191 +68601 +42169 +47617 +57756 +57756 +11.4989% +6.7685% +7.7103% +9.5082% +9.5082%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 155293 +17745 +18454 +19733 +19733 +12.9010% +13.4859% +14.5567% +14.5567%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 175427 +19786 +18876 +18918 +20392 +20583 +12.7126% +12.0574% +12.0875% +13.1532% +13.2927%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 156734 +18225 +17349 +17442 +18849 +18947 +13.1580% +12.4468% +12.5219% +13.6701% +13.7509%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 177755 +18793 +19023 +18595 +19833 +19833 +11.8223% +11.9844% +11.6832% +12.5587% +12.5587%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1336706 +313970 +182037 +212833 +152622 +152622 +30.6990% +15.7653% +18.9375% +12.8895% +12.8895%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 56174 +15292 +14474 +13749 +14074 +14074 +37.4052% +34.7098% +32.4078% +33.4299% +33.4299%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 53626 +12557 +11224 +11603 +12474 +12474 +30.5754% +26.4704% +27.6111% +30.3120% +30.3120%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 44422 +35682 +21307 +21407 +21509 +21509 +408.2609% +92.1782% +93.0133% +93.8725% +93.8725%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31090 +14155 +13537 +12681 +12742 +12742 +83.5843% +77.1207% +68.8848% +69.4463% +69.4463%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 122068 +22160 +19177 +23085 +23420 +23420 +22.1804% +18.6382% +23.3222% +23.7410% +23.7410%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 88892 +17794 +16164 +17447 +17766 +17766 +25.0274% +22.2253% +24.4202% +24.9782% +24.9782%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 130584 +24880 +24087 +24962 +26150 +26072 +23.5374% +22.6175% +23.6333% +25.0397% +24.9464%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 137541 +22384 +20225 +23219 +24460 +24291 +19.4378% +17.2398% +20.3102% +21.6305% +21.4490%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 20318 +10124 +9512 +9080 +9085 +9085 +99.3133% +88.0252% +80.7973% +80.8778% +80.8778%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 21495 +6688 +6062 +5454 +5796 +5796 +45.1678% +39.2795% +34.0004% +36.9195% +36.9195%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 9186 +7925 +7154 +6736 +6800 +6800 +628.4695% +352.0669% +274.9388% +284.9958% +284.9958%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 16227 +14791 +11444 +10537 +10496 +10496 +1030.0139% +239.2641% +185.1845% +183.1443% +183.1443%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 33275 +11565 +11380 +10695 +10812 +10812 +53.2704% +51.9753% +47.3649% +48.1325% +48.1325%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 33491 +7631 +7348 +7231 +7866 +7866 +29.5089% +28.1070% +27.5362% +30.6966% +30.6966%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20331 +16847 +13433 +13497 +13497 +483.5534% +194.7376% +197.4978% +197.4978%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 29787 +19088 +18313 +16905 +16898 +16898 +178.4092% +159.6043% +131.2296% +131.1040% +131.1040%
SCP_Astral_MBR 92167 93585 91884 90864 90838 112473 +20306 +18888 +20589 +21609 +21635 +22.0317% +20.1827% +22.4076% +23.7817% +23.8171%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61859 +5160 +6066 +5968 +5968 +9.1007% +10.8723% +10.6779% +10.6779%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1934276 +158148 +158930 +8.9041% +8.9521%
EWZ_2P_MBR_Exploris_Human 836809 836809 909271 +72462 +72462 +8.6593% +8.6593%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1015270 +100346 +101321 +10.9677% +11.0861%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2311763 +233729 +233727 +11.2476% +11.2475%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2311763 +233729 +233727 +11.2476% +11.2475%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 151919 +40415 +18300 +20560 +19888 +19888 +36.2453% +13.6957% +15.6518% +15.0631% +15.0631%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 128064 +19797 +10712 +13405 +13248 +13248 +18.2854% +9.1281% +11.6912% +11.5385% +11.5385%
MTAC_3P_Standard 110265 118693 115800 116148 116148 130224 +19959 +11531 +14424 +14076 +14076 +18.1009% +9.7150% +12.4560% +12.1190% +12.1190%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 58832 +9974 +9800 +9837 +9837 +20.4143% +19.9869% +20.0776% +20.0776%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 65460 +11491 +10385 +9620 +9576 +9639 +21.2919% +18.8561% +17.2278% +17.1355% +17.2677%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 59577 +10956 +9912 +9288 +9117 +9162 +22.5335% +19.9577% +18.4692% +18.0678% +18.1732%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66203 +11143 +10284 +9496 +9376 +9376 +20.2379% +18.3909% +16.7457% +16.4992% +16.4992%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 74245 +22973 +15461 +19198 +15652 +15680 +44.8061% +26.3014% +34.8757% +26.7131% +26.7737%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21643 +7203 +6685 +6394 +5936 +5936 +49.8823% +44.6918% +41.9306% +37.7921% +37.7921%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20474 +5991 +5409 +5558 +5404 +5402 +41.3657% +35.9044% +37.2620% +35.8593% +35.8413%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18401 +9661 +9025 +9012 +9037 +9016 +110.5378% +96.2564% +95.9847% +96.5079% +96.0682%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17899 +9001 +8640 +8115 +8089 +8089 +101.1576% +93.3146% +82.9415% +82.4567% +82.4567%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 44246 +9381 +7949 +9904 +9821 +9821 +26.9066% +21.8999% +28.8393% +28.5287% +28.5287%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32663 +8014 +7197 +7544 +7440 +7440 +32.5125% +28.2612% +30.0330% +29.4969% +29.4969%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 48564 +11876 +10888 +10915 +11143 +11105 +32.3703% +28.8990% +28.9915% +29.7774% +29.6457%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50108 +9952 +8563 +10065 +10215 +10162 +24.7833% +20.6114% +25.1355% +25.6060% +25.4393%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8310 +4644 +4361 +4101 +4064 +4064 +126.6776% +110.4330% +97.4341% +95.7136% +95.7136%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8630 +3331 +3019 +2775 +2564 +2563 +62.8609% +53.8050% +47.3954% +42.2684% +42.2449%
SCP_Astral_250pg_3ms 675 721 908 879 879 4343 +3668 +3622 +3435 +3464 +3464 +543.4074% +502.3578% +378.3040% +394.0842% +394.0842%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6924 +5488 +5186 +4779 +4761 +4759 +382.1727% +298.3890% +222.7972% +220.1110% +219.8152%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13371 +5577 +5399 +5119 +4965 +4963 +71.5550% +67.7245% +62.0334% +59.0650% +59.0271%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12967 +3809 +3625 +3596 +3553 +3552 +41.5921% +38.8033% +38.3737% +37.7417% +37.7270%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8866 +7020 +6266 +6280 +6277 +380.2817% +241% +242.8461% +242.4488%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12177 +8303 +8022 +7403 +7372 +7373 +214.3263% +193.0686% +155.0691% +153.4235% +153.4763%
SCP_Astral_MBR 24110 24991 24570 24544 24527 31171 +7061 +6180 +6601 +6627 +6644 +29.2866% +24.7289% +26.8661% +27.0005% +27.0885%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61859 +5160 +6066 +5968 +5968 +9.1007% +10.8723% +10.6779% +10.6779%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 63501 +8230 +8354 +14.8903% +15.1486%
EWZ_2P_MBR_Exploris_Human 48465 48473 55281 +6816 +6808 +14.0638% +14.0449%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 59157 +7911 +7980 +15.4373% +15.5929%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80554 +7276 +7277 +9.9293% +9.9308%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80554 +7276 +7277 +9.9293% +9.9308%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92208 +4288 -680 -1774 -1233 -2078 +4.8772% -0.7321% -1.8876% -1.3195% -2.2039%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67667 +3894 +3693 +4056 +4652 +1832 +6.1060% +5.7727% +6.3763% +7.3824% +2.7827%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68295 +3978 +3831 +4076 +4910 +2328 +6.1850% +5.9429% +6.3470% +7.7463% +3.5290%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12987 +920 +1017 +1047 +748 +7.6241% +8.4962% +8.7688% +6.1116%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13335 +903 +864 +973 +1007 +675 +7.2635% +6.9281% +7.8709% +8.1684% +5.3318%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12808 +800 +761 +848 +840 +628 +6.6622% +6.3169% +7.0903% +7.0187% +5.1560%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13422 +861 +957 +945 +1012 +648 +6.8545% +7.6775% +7.5739% +8.1547% +5.0728%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 159548 +13324 +6014 +5558 +3721 +2262 +9.1120% +3.9170% +3.6093% +2.3879% +1.4381%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12022 +2859 +2494 +2437 +2688 +2000 +31.2016% +26.1755% +25.4251% +28.7979% +19.9561%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11665 +2367 +1904 +2253 +2112 +1676 +25.4571% +19.5062% +23.9375% +22.1082% +16.7785%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9912 +7462 +3828 +3665 +3796 +3563 +304.5714% +62.9191% +58.6682% +62.0667% +56.1191%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6851 +2148 +2263 +1893 +1928 +1902 +45.6730% +49.3243% +38.1807% +39.1631% +38.4320%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17900 +1710 +1620 +1875 +1845 +1364 +10.5621% +9.9509% +11.7005% +11.4917% +8.2487%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15250 +1651 +1409 +1562 +1579 +1266 +12.1406% +10.1799% +11.4115% +11.5500% +9.0532%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18389 +2137 +2113 +2272 +2464 +1931 +13.1492% +12.9823% +14.0969% +15.4725% +11.7329%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19052 +2035 +1874 +2139 +2307 +1703 +11.9586% +10.9093% +12.6471% +13.7772% +9.8161%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5613 +1966 +1700 +1749 +2074 +1799 +53.9073% +43.4449% +45.2640% +58.6041% +47.1683%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6052 +1752 +1449 +1255 +1075 +883 +40.7442% +31.4795% +26.1622% +21.5994% +17.0826%
SCP_Astral_250pg_3ms 576 22 936 741 736 3082 +2506 +3060 +2146 +2341 +2346 +435.0694% +13909.0909% +229.2735% +315.9244% +318.7500%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4684 +4047 +2604 +2655 +2638 +2616 +635.3218% +125.1923% +130.8526% +128.9345% +126.4990%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8214 +1969 +1868 +2198 +2087 +1995 +31.5292% +29.4359% +36.5359% +34.0623% +32.0791%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8455 +1733 +1726 +1443 +1432 +1113 +25.7810% +25.6502% +20.5790% +20.3901% +15.1594%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5639 +4657 +3274 +3462 +3403 +474.2363% +138.4355% +159.0262% +152.1914%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7801 +4093 +3794 +3756 +3883 +3698 +110.3830% +94.6843% +92.8554% +99.1067% +90.1292%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21173 +1008 +1044 +1099 +1380 +1275 +4.9988% +5.1865% +5.4747% +6.9722% +6.4077%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5107 +422 +407 +475 +368 +9.0075% +8.6596% +10.2547% +7.7654%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 252976 +7717 +5554 +3.1465% +2.2447%
EWZ_2P_MBR_Exploris_Human 115447 117345 117354 +1907 +9 +1.6518% +0.0077%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 134520 +5552 +3814 +4.3049% +2.9180%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 192723 +14549 +9180 +8.1656% +5.0016%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 192723 +14549 +9180 +8.1656% +5.0016%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8519 +674 +344 +364 +316 +270 +8.5915% +4.2080% +4.4635% +3.8522% +3.2731%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12328 +967 +834 +977 +990 +530 +8.5116% +7.2560% +8.6072% +8.7317% +4.4923%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12468 +995 +908 +991 +1072 +636 +8.6725% +7.8547% +8.6347% +9.4068% +5.3753%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4495 +367 +403 +395 +312 +8.8905% +9.8485% +9.6341% +7.4588%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4595 +380 +347 +377 +381 +258 +9.0154% +8.1685% +8.9379% +9.0413% +5.9488%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4419 +344 +285 +329 +322 +234 +8.4417% +6.8940% +8.0440% +7.8594% +5.5914%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4614 +365 +377 +370 +383 +260 +8.5903% +8.8978% +8.7182% +9.0522% +5.9715%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8161 +906 +579 +821 +682 +624 +12.4879% +7.6365% +11.1853% +9.1189% +8.2792%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4361 +1116 +972 +950 +1043 +800 +34.3914% +28.6810% +27.8511% +31.4346% +22.4656%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4218 +964 +785 +927 +784 +726 +29.6251% +22.8663% +28.1677% +22.8305% +20.7904%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3723 +1273 +1327 +1273 +1326 +1289 +51.9592% +55.3840% +51.9592% +55.3191% +52.9581%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3705 +1197 +1269 +1071 +1063 +1122 +47.7273% +52.0936% +40.6606% +40.2347% +43.4379%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6271 +692 +615 +767 +725 +617 +12.4037% +10.8734% +13.9353% +13.0725% +10.9126%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5362 +641 +524 +579 +551 +518 +13.5776% +10.8309% +12.1054% +11.4529% +10.6936%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6493 +882 +838 +897 +940 +780 +15.7191% +14.8187% +16.0293% +16.9278% +13.6531%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6683 +837 +734 +840 +878 +718 +14.3175% +12.3382% +14.3762% +15.1249% +12.0369%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2132 +840 +708 +726 +844 +773 +65.0155% +49.7191% +51.6358% +65.5280% +56.8801%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2246 +678 +586 +488 +373 +376 +43.2398% +35.3012% +27.7588% +19.9146% +20.1070%
SCP_Astral_250pg_3ms 307 8 350 283 281 1324 +1017 +1316 +974 +1041 +1043 +331.2704% +16450% +278.2857% +367.8445% +371.1744%
SCP_Astral_250pg_6ms 637 756 751 766 767 1830 +1193 +1074 +1079 +1064 +1063 +187.2841% +142.0635% +143.6751% +138.9034% +138.5919%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3020 +813 +745 +851 +790 +803 +36.8373% +32.7473% +39.2347% +35.4260% +36.2201%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3139 +736 +751 +662 +600 +541 +30.6284% +31.4489% +26.7259% +23.6314% +20.8237%
SCP_Astral_500pg_3ms 525 902 828 835 2204 +1679 +1302 +1376 +1369 +319.8095% +144.3459% +166.1836% +163.9521%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2925 +1607 +1478 +1439 +1490 +1457 +121.9272% +102.1424% +96.8371% +103.8328% +99.2507%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5191 +483 +471 +479 +476 +475 +10.2591% +9.9788% +10.1655% +10.0954% +10.0721%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5107 +422 +407 +475 +368 +9.0075% +8.6596% +10.2547% +7.7654%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7451 +410 +345 +5.8230% +4.8551%
EWZ_2P_MBR_Exploris_Human 6167 6284 6382 +215 +98 +3.4863% +1.5595%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7422 +535 +459 +7.7683% +6.5920%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6366 +562 +411 +9.6830% +6.9018%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6366 +562 +411 +9.6830% +6.9018%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92189 -2090
MTAC_3P_Alternating 65832 67664 +1832
MTAC_3P_Standard 65967 68290 +2323
MTAC_Yeast_Alternating_3min 12239 12973 +734
MTAC_Yeast_Alternating_5min 12660 13329 +669
MTAC_Yeast_Standard_3min 12180 12806 +626
MTAC_Yeast_Standard_5min 12772 13414 +642
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 159542 +2257
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12012 +1990
SCP_Astral_1000pg_24ms 9989 11661 +1672
SCP_Astral_1000pg_3ms 6349 9906 +3557
SCP_Astral_1000pg_6ms 4949 6845 +1896
SCP_Astral_10ng_12ms 16536 17899 +1363
SCP_Astral_10ng_24ms 13982 15250 +1268
SCP_Astral_10ng_3ms 16458 18372 +1914
SCP_Astral_10ng_6ms 17349 19042 +1693
SCP_Astral_250pg_12ms 3814 5612 +1798
SCP_Astral_250pg_24ms 5169 6052 +883
SCP_Astral_250pg_3ms 736 3080 +2344
SCP_Astral_250pg_6ms 2066 4684 +2618
SCP_Astral_500pg_12ms 6219 8212 +1993
SCP_Astral_500pg_24ms 7342 8455 +1113
SCP_Astral_500pg_3ms 2234 5634 +3400
SCP_Astral_500pg_6ms 4103 7801 +3698
SCP_Astral_MBR 19891 21173 +1282
Seer_Astral_45 242898
Seer_Astral_single 4739 5107 +368
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 252955 +5533
EWZ_2P_MBR_Exploris_Human 117340 117346 +6
EWZ_2P_MBR_Exploris_YeastHuman 130702 134508 +3806
MacCoss_Eclipse_Normalization_noNorm 183540 192721 +9181
MacCoss_Eclipse_Normalization_yesNorm 183540 192721 +9181

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0008 +0.0003 +0.0003
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0005 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0003 +0.0002 -0.0002 +0.0007 +0.0005 +0.0005
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0002 +0.0012 -0.0007 +0.0004 +0.0005 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0007 +0.0008 +0.0012 +0.0019 +0.0019
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0002 +0.0002 +0.0011 +0.0013 +0.0013 +0.0013
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0004 +0.0015 +0.0010 +0.0008 +0.0016 +0.0016
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0001 +0.0011 +0.0020 +0.0025 +0.0026
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0001 -0.0007 -0.0007
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0005 +0.0006 +0.0002 +0.0016 -0.0000 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0001 +0.0024 +0.0031 +0.0021
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0007 +0.0061 +0.0040 +0.0039 +0.0054 +0.0054
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0003 +0.0033 +0.0051 +0.0033 +0.0041 +0.0049
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0015 +0.0017 +0.0026 +0.0050 +0.0041 +0.0041
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0001 +0.0021 +0.0015 +0.0023 +0.0023
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0015 +0.0035 +0.0006 +0.0029 +0.0028 +0.0028
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0011 +0.0035 +0.0037 +0.0029 +0.0028 +0.0028
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0016 +0.0023 +0.0015 +0.0037 +0.0027 +0.0027
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0000 +0.0039 +0.0041 -0.0002 +0.0053 +0.0053
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0030 +0.0032 +0.0042 +0.0054 +0.0061 +0.0061
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0049 +0.0117 +0.0049 +0.0049
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0013 +0.0064 +0.0039 +0.0062 +0.0057
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0020 +0.0041 +0.0029 +0.0047 +0.0045 +0.0045
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0005 +0.0018 +0.0029 +0.0018 +0.0016 +0.0016
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0028 +0.0041 +0.0051 +0.0063 +0.0063
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0061 +0.0092 +0.0094 +0.0076 +0.0076
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0011 +0.0037 +0.0030 +0.0025 +0.0033 +0.0033
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0014 +0.0012 +0.0013
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0004 +0.0026 +0.0010
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0015 -0.0005 -0.0005 -0.0021 -0.0023 -0.0005
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0001 +0.0012 +0.0024 +0.0028 +0.0025 +0.0042
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 0.0018 +0.0084 +0.0071 +0.0066 +0.0062
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0009 +0.0050 +0.0047 +0.0057 +0.0043 +0.0066
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0039 +0.0019 +0.0008 -0.0020 -0.0012 -0.0015
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0004 +0.0031 +0.0041 +0.0051 +0.0050
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0032 -0.0029 -0.0001
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0010 +0.0019 -0.0008 +0.0018 -0.0001 +0.0007
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0034 +0.0015 +0.0008 +0.0009 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0019 +0.0051 +0.0039 +0.0051 +0.0051 +0.0064
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0006 +0.0066 +0.0065 +0.0078 +0.0078 +0.0093
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0012 +0.0030 +0.0061 +0.0055 +0.0057 +0.0059
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0003 +0.0051 +0.0036 +0.0050 +0.0057
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0002 +0.0030 +0.0021 +0.0014 +0.0043 +0.0034
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0003 +0.0040 +0.0077 +0.0070 +0.0064 +0.0064
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0010 +0.0045 +0.0010 +0.0044 +0.0037 +0.0039
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0005 +0.0048 +0.0071 +0.0029 +0.0058 +0.0056
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0055 +0.0097 +0.0097 +0.0081 +0.0068 +0.0098
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0021 +0.0007 -0.0021 +0.0065 -0.0021 -0.0021
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0062 +0.0161 +0.0129 +0.0146 +0.0150 +0.0150
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0020 +0.0056 +0.0059 +0.0006 +0.0040 +0.0044
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0012 +0.0008 -0.0011 +0.0040 +0.0050 +0.0049
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0048 +0.0090 -0.0022 +0.0029 +0.0050 +0.0051
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0013 +0.0058 +0.0058 +0.0020 +0.0068 +0.0055
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0004 +0.0055 +0.0026 +0.0021 +0.0046 +0.0052
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0032 +0.0106 +0.0105
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 0.0002 +0.0015 +0.0015
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0000 +0.0003 +0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0001 +0.0003 -0.0001 +0.0003 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0000 +0.0009 -0.0002 +0.0004 +0.0003 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0005 +0.0005 +0.0008 +0.0009 +0.0009
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0002 +0.0006 +0.0010 +0.0012 +0.0010 +0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0001 +0.0007 +0.0006 +0.0007 +0.0009 +0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0001 +0.0009 +0.0011 +0.0016 +0.0016
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0005 +0.0003 +0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0009 +0.0014 +0.0004 +0.0016 +0.0010 +0.0010
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0006 +0.0021 +0.0036 +0.0025
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0007 +0.0052 +0.0035 +0.0038 +0.0044 +0.0044
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0007 +0.0028 +0.0037 +0.0033 +0.0034 +0.0041
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0017 +0.0015 +0.0023 +0.0045 +0.0041 +0.0041
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 -0.0000 +0.0016 +0.0009 +0.0015 +0.0015
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0010 +0.0024 +0.0007 +0.0022 +0.0018 +0.0018
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0010 +0.0030 +0.0031 +0.0026 +0.0025 +0.0025
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0010 +0.0015 +0.0008 +0.0022 +0.0018 +0.0018
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0009 +0.0039 +0.0036 +0.0012 +0.0041 +0.0041
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0017 +0.0025 +0.0026 +0.0031 +0.0031 +0.0031
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0043 +0.0103 +0.0043 +0.0043
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0022 +0.0059 +0.0044 +0.0052 +0.0052
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0020 +0.0039 +0.0024 +0.0040 +0.0033 +0.0033
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0015 +0.0031 +0.0033 +0.0033 +0.0032 +0.0032
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0039 +0.0020 +0.0042 +0.0054 +0.0054
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0050 +0.0076 +0.0069 +0.0060 +0.0060
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0015 +0.0032 +0.0030 +0.0023 +0.0027 +0.0027
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0002 +0.0024 +0.0024
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0001 +0.0013 +0.0015
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0007 +0.0010 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0010 -0.0009 -0.0008 -0.0013 -0.0013 -0.0005
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 0.0000 +0.0009 +0.0014 +0.0021 +0.0019 +0.0024
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0016 +0.0052 +0.0050 +0.0046 +0.0038
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0017 +0.0054 +0.0038 +0.0042 +0.0030 +0.0042
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0015 +0.0023 +0.0020 -0.0001 +0.0001 +0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0005 +0.0028 +0.0032 +0.0043 +0.0039
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0010 -0.0005 +0.0011
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0005 +0.0022 -0.0011 +0.0012 +0.0011 +0.0015
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0024 +0.0013 -0.0001 +0.0009 +0.0016
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0009 +0.0040 +0.0047 +0.0049 +0.0034 +0.0051
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0001 +0.0045 +0.0034 +0.0042 +0.0032 +0.0066
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0010 +0.0035 +0.0045 +0.0050 +0.0050 +0.0043
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0021 +0.0027 +0.0010 +0.0021 +0.0023
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0005 +0.0027 +0.0009 +0.0010 +0.0021 +0.0025
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0014 +0.0036 +0.0060 +0.0052 +0.0047 +0.0054
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0007 +0.0032 +0.0012 +0.0031 +0.0023 +0.0027
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0004 +0.0043 +0.0045 +0.0023 +0.0034 +0.0049
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0038 +0.0051 +0.0070 +0.0041 +0.0039 +0.0067
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0008 +0.0069 +0.0090 +0.0055 +0.0008 +0.0008
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0068 +0.0168 +0.0136 +0.0123 +0.0115 +0.0116
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0021 +0.0060 +0.0056 +0.0028 +0.0048 +0.0043
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0007 +0.0012 -0.0008 +0.0036 +0.0038 +0.0060
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0042 +0.0075 -0.0024 +0.0014 +0.0039 +0.0040
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0006 +0.0026 +0.0028 -0.0003 +0.0034 +0.0024
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0004 +0.0027 +0.0021 +0.0026 +0.0032 +0.0044
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0032 +0.0106 +0.0101
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 9735 -14660 -14853

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 345 -426 -417

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0354 +0.0038 +0.0044

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 1102 +258 +1731

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -128 -318 -184

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 13 +3 +0 +1 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1695 +0.0237 +0.0275 +0.0295 +0.0322 +0.0320
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1617 +0.0224 +0.0254 +0.0265 +0.0293 +0.0292
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1650 +0.0194 +0.0225 +0.0242 +0.0241
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1543 +0.0012 +0.0134 +0.0167 +0.0187 +0.0188
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1745 +0.0047 +0.0106 +0.0129 +0.0146 +0.0147
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1518 +0.0015 +0.0152 +0.0181 +0.0195 +0.0195
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1543 +0.0063 +0.0044 +0.0048 +0.0038 +0.0037
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5965 +0.0096 +0.0096
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2143 +0.0426 +0.0425

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0856 +0.0093 +0.0117 +0.0129 +0.0136 +0.0099
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0813 +0.0090 +0.0110 +0.0113 +0.0125 +0.0095
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0767 +0.0094 +0.0107 +0.0109 +0.0080
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0660 -0.0117 +0.0057 +0.0068 +0.0072 +0.0059
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0801 +0.0008 +0.0044 +0.0048 +0.0028 +0.0026
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0642 -0.0129 +0.0075 +0.0073 +0.0073 +0.0058
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1013 -0.0015 -0.0006 -0.0023 -0.0014 -0.0020
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5784 -0.0098 -0.0096
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1389 +0.0156 +0.0143

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0125 -0.0020 +0.0070 +0.0012 +0.0000 -0.0652
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0039 -0.0076 +0.0055 -0.0002 -0.0001 -0.0369
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0011 +0.0007 -0.0023 -0.0001 -0.0000 +0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0615 +0.0012 -0.0008 +0.0020 -0.0002 -0.0652
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0613 -0.0054 -0.0006 -0.0003 +0.0001 -0.0110
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0546 -0.0080 +0.0050 -0.0016 -0.0001 +0.0257
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1281 -0.0059 -0.0059 +0.0211 -0.0012 -0.1072
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0819 +0.0062 +0.0047 -0.0191 -0.0001 +0.0215
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1955 +0.0183 -0.0240 +0.0287 +0.0020 -0.0850
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1055 +0.0048 -0.0054 -0.0067 +0.0002 +0.0170
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0470 +0.0009 +0.0001 -0.0089 -0.0000 +0.0014
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2068 +0.0051 -0.0017 +0.0004 +0.0004 +0.0029
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1338 -0.0032 -0.0062 -0.0160 +0.0006 +0.1107
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0795 +0.0043 -0.0045 -0.0054 -0.0001 -0.0224
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0387 +0.0169 -0.0238 +0.0355 +0 -0.0578
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0196 +0.0009 +0.0076 -0.0005 +0.0006 -0.0544
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0030 -0.0089 +0.0045 +0.0004 +0.0011 -0.0392
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0080 +0.0054 -0.0044 +0.0010 +0.0033 +0.0011
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0671 +0.0013 +0.0005 -0.0055 +0.0004 -0.0539
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0604 -0.0060 -0.0005 -0.0005 -0.0005 -0.0092
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0505 -0.0084 +0.0078 -0.0007 +0.0020 +0.0175
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1634 -0.0077 -0.0028 +0.0144 -0.0004 -0.0574
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0772 +0.0048 +0.0016 -0.0170 -0.0057 +0.0273
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2393 +0.0504 -0.0481 +0.0073 +0.0089 -0.0350
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1032 +0.0031 -0.0032 -0.0081 +0.0006 +0.0267
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0443 +0.0011 -0.0008 -0.0084 -0.0000 +0.0022
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2190 +0.0036 -0.0008 +0.0016 +0.0018 +0.0139
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1190 +0.0005 -0.0096 -0.0297 +0.0070 +0.1074
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0808 +0.0056 -0.0034 -0.0033 +0.0038 -0.0314
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0640 +0.0405 -0.0089 +0.0322 +0.0276 -0.0809
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1389 +0.0343 +0.0202 -0.0086 +0.0005 -0.1694
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1253 +0.0169 -0.0058 +0.0004 +0.0004 -0.0850
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1287 +0.0117 -0.0078 +0.0011 -0.0001 -0.1320
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1438 +0.0441 -0.0007 -0.0136 +0.0007 -0.1548
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1347 +0.0164 -0.0031 -0.0002 +0.0007 -0.0853
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1352 +0.0170 -0.0063 +0.0017 +0.0006 -0.1334
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2022 +0.0445 +0.0761 -0.1281 +0.0017 -0.3704
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0428 -0.0103 +0.0134 -0.0147 -0.0018 -0.1066
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2547 -0.0030 +0.1483 +0.0078 -0.0120 -0.6908
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1880 +0.0037 +0.0045 +0.0051 +0.0002 -0.1627
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0437 +0.0676 -0.0087 -0.0168 +0.0006 -0.1086
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1856 +0.0316 +0.0062 -0.0049 +0.0001 -0.1498
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2416 -0.0093 +0.0378 -0.0706 +0.0033 -0.3385
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0604 +0.0977 -0.0155 +0.0159 +0.0001 -0.1876
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5541 +0.0737 +0.1982 -0.0827 -0.0008 -0.7203
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0600 +0.0149 -0.0182 -0.0054 +0.1015 -0.1623
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0388 +0.0035 +0.0005 +0.0043 +0.0189 -0.0616
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0541 -0.0157 -0.0104 +0.0083 +0.0352 -0.0933
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0503 -0.0042 +0.0002 -0.0084 +0.0711 -0.1404
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0388 +0.0032 -0.0030 +0.0035 +0.0313 -0.0641
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0545 +0.0000 +0.0073 -0.0081 +0.0305 -0.1014
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0460 +0.0146 +0.0452 -0.0355 +0.0761 -0.2577
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0163 -0.0057 -0.0062 -0.0031 +0.0154 -0.0477
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0629 -0.1294 +0.1626 +0.0090 +0.0813 -0.5189
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0330 -0.0046 +0.0074 +0.0016 +0.0039 -0.0400
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0103 +0.0109 -0.0066 +0.0090 -0.0065 -0.0266
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0360 -0.0053 +0.0093 +0.0025 +0.0083 -0.0547
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0674 -0.0166 +0.0170 -0.0166 +0.0315 -0.1816
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0211 +0.0068 -0.0006 -0.0039 +0.0560 -0.1087
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1201 -0.0891 -0.0032 -0.0082 +0.0618 -0.3721
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 19.1000 -4.9700 +1.7800 -0.7700 +1.9700 +0.0700 -20.6481% +10.2771% -3.8752% +11.5003% +0.3678%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 9.2300 -3.5200 +0.1600 +0.8700 -0.0600 +1.1000 -27.6078% +1.7641% +10.4067% -0.6459% +13.5301%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.4700 -2.8400 +0.5100 -0.1900 -1.3400 -0.3200 -23.0707% +5.6920% -1.9669% -12.3959% -3.2686%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 4.8600 +0.6300 +0.4500 -0.0800 +0.5800 +14.8936% +10.2041% -1.6194% +13.5514%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.1500 -0.2300 +0.7700 +0.4000 +0.6100 +0.5900 -4.2751% +17.5799% +8.4211% +13.4361% +12.9386%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.2500 -0.1800 +1.1100 +0.8100 +0.5900 +1.0100 -3.3149% +26.8116% +18.2432% +12.6609% +23.8208%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.1400 -0.4100 +0.7200 +0.6100 +0.6800 +0.6000 -7.3874% +16.2896% +13.4658% +15.2466% +13.2159%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 15.4900 -12.1700 -4.2700 -2.8300 -3.7900 -2.4100 -43.9986% -21.6093% -15.4476% -19.6577% -13.4637%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5 -0.7900 +0.4100 +0.3500 +0.9100 +0.6400 -13.6442% +8.9325% +7.5269% +22.2494% +14.6789%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.2200 -1.0400 +0.8200 -0.6600 +0.2100 -16.6134% +18.6364% -11.2245% +4.1916%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.1700 +0.6500 +1.4400 +0.3700 +1.5300 +1.3400 +14.3805% +38.6059% +7.7083% +42.0330% +34.9869%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.2000 -1.5400 +0.6900 +0.2800 +0.7600 +0.4800 -26.8293% +19.6581% +7.1429% +22.0930% +12.9032%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.1400 -0.9300 +0.6100 +0.6300 +0.4000 +0.6700 -13.1542% +11.0307% +11.4338% +6.9686% +12.2486%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.2800 -1.3100 +0.5500 +0.1400 +0.7400 +0.3900 -17.2596% +9.5986% +2.2801% +13.3574% +6.6214%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.7200 -0.7300 +1.0500 +1.4200 +1.3100 +1.3000 -11.3178% +22.4839% +33.0233% +29.7052% +29.4118%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.9000 -1.4800 +0.9700 +1.2700 +0.2800 +0.9400 -20.0542% +19.6755% +27.4298% +4.9822% +18.9516%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.4100 -0.3300 +0.7500 +1.0200 +0.8200 -6.9620% +20.4918% +30.0885% +22.8412%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.5500 -0.7100 +0.7100 +0.7900 +0.4900 -13.4981% +18.4896% +21.0106% +12.0690%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.3400 -0.3100 +0.9100 +0.6300 +0.8900 +0.7900 -6.6667% +26.5306% +16.9811% +25.7971% +22.2535%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.7200 +0.5500 +1.4300 +1.0300 +1.4500 +1.2000 +13.1894% +43.4650% +27.9133% +44.3425% +34.0909%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.3300 -0.9500 +0.8000 +0.7300 +0.8400 +0.6300 -17.9924% +22.6629% +20.2778% +24.0688% +17.0270%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.7300 -0.7800 +0.9100 +0.5800 -0.0800 +0.7000 -14.1561% +23.8220% +13.9759% -1.6632% +17.3697%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.7300 +0 +1.2700 +1.1600 +0.9600 +0% +36.7052% +32.4930% +25.4642%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.2200 +0.5700 +1.6000 +1.4900 +1.4400 +1.7200 +12.2581% +44.1989% +39.9464% +38.0952% +49.1429%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.5700 -1.4700 +1.0200 +1.4700 +0.3600 -16.2611% +15.5725% +24.0984% +4.9931%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.0800 +0.6100 +0.9400 -0.5000 -0.1400 +13.6465% +22.7053% -8.9606% -2.6820%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 24.6100 -1.5700 +0.3300 -5.9969% +1.3591%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.9400 +0.0300 +0.5200 +0.2324% +4.1868%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 13.8600 +1.8000 -0.5500 +14.9254% -3.8168%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 37.8400 +10.3300 +9.5600 +37.5500% +33.8048%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 36.9700 +9.3000 +8.4700 +33.6104% +29.7193%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png