Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1337891 +241397 +30886 +25936 +44350 +44350 +22.0154% +2.3631% +1.9769% +3.4286% +3.4286%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 647487 +61165 +31725 +36777 +47606 +47606 +10.4320% +5.1522% +6.0220% +7.9359% +7.9359%
MTAC_3P_Standard 596590 623022 617574 607435 607435 654249 +57659 +31227 +36675 +46814 +46814 +9.6648% +5.0122% +5.9386% +7.7068% +7.7068%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 151163 +13615 +14324 +15603 +15603 +9.8984% +10.4678% +11.5100% +11.5100%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 170930 +15289 +14379 +14421 +15895 +16086 +9.8232% +9.1849% +9.2142% +10.2525% +10.3885%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 153595 +15086 +14210 +14303 +15710 +15808 +10.8917% +10.1948% +10.2684% +11.3936% +11.4728%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 172256 +13294 +13524 +13096 +14334 +14334 +8.3630% +8.5200% +8.2282% +9.0766% +9.0766%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1324497 +301761 +169828 +200624 +140413 +140413 +29.5053% +14.7079% +17.8511% +11.8584% +11.8584%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 53460 +12578 +11760 +11035 +11360 +11360 +30.7666% +28.2014% +26.0106% +26.9834% +26.9834%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 51759 +10690 +9357 +9736 +10607 +10607 +26.0294% +22.0674% +23.1683% +25.7752% +25.7752%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 41660 +32920 +18545 +18645 +18747 +18747 +376.6590% +80.2293% +81.0124% +81.8182% +81.8182%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 28651 +11716 +11098 +10242 +10303 +10303 +69.1822% +63.2257% +55.6358% +56.1533% +56.1533%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 117356 +17448 +14465 +18373 +18708 +18708 +17.4641% +14.0586% +18.5618% +18.9644% +18.9644%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 85696 +14598 +12968 +14251 +14570 +14570 +20.5322% +17.8308% +19.9468% +20.4848% +20.4848%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 121918 +16214 +15421 +16296 +17484 +17406 +15.3391% +14.4802% +15.4286% +16.7417% +16.6545%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 129850 +14693 +12534 +15528 +16769 +16600 +12.7591% +10.6840% +13.5827% +14.8292% +14.6578%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 18989 +8795 +8183 +7751 +7756 +7756 +86.2762% +75.7264% +68.9713% +69.0466% +69.0466%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 19436 +4629 +4003 +3395 +3737 +3737 +31.2622% +25.9379% +21.1645% +23.8041% +23.8041%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8366 +7105 +6334 +5916 +5980 +5980 +563.4417% +311.7126% +241.4694% +250.6287% +250.6287%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 14678 +13242 +9895 +8988 +8947 +8947 +922.1448% +206.8785% +157.9613% +156.1159% +156.1159%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 30819 +9109 +8924 +8239 +8356 +8356 +41.9576% +40.7582% +36.4880% +37.1989% +37.1989%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 31632 +5772 +5489 +5372 +6007 +6007 +22.3202% +20.9961% +20.4570% +23.4420% +23.4420%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 18821 +15337 +11923 +11987 +11987 +440.2124% +172.8472% +175.4024% +175.4024%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 27524 +16825 +16050 +14642 +14635 +14635 +157.2577% +139.8815% +113.6625% +113.5464% +113.5464%
SCP_Astral_MBR 92167 93585 91884 90864 90838 109835 +17668 +16250 +17951 +18971 +18997 +19.1696% +17.3639% +19.5366% +20.8785% +20.9131%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 58677 +1978 +2884 +2786 +2786 +3.4886% +5.1691% +4.9847% +4.9847%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1915462 +139334 +140116 +7.8448% +7.8923%
EWZ_2P_MBR_Exploris_Human 836809 836809 898302 +61493 +61493 +7.3485% +7.3485%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 997629 +82705 +83680 +9.0395% +9.1559%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2293041 +215007 +215005 +10.3467% +10.3465%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2293041 +215007 +215005 +10.3467% +10.3465%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 149360 +37856 +15741 +18001 +17329 +17329 +33.9504% +11.7805% +13.7037% +13.1249% +13.1249%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 124688 +16421 +7336 +10029 +9872 +9872 +15.1671% +6.2513% +8.7468% +8.5981% +8.5981%
MTAC_3P_Standard 110265 118693 115800 116148 116148 126809 +16544 +8116 +11009 +10661 +10661 +15.0039% +6.8378% +9.5069% +9.1788% +9.1788%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 56664 +7806 +7632 +7669 +7669 +15.9769% +15.5653% +15.6526% +15.6526%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 63137 +9168 +8062 +7297 +7253 +7316 +16.9875% +14.6382% +13.0677% +12.9787% +13.1062%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 57350 +8729 +7685 +7061 +6890 +6935 +17.9531% +15.4737% +14.0408% +13.6544% +13.7558%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 63399 +8339 +7480 +6692 +6572 +6572 +15.1453% +13.3765% +11.8010% +11.5649% +11.5649%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 72325 +21053 +13541 +17278 +13732 +13760 +41.0614% +23.0352% +31.3877% +23.4362% +23.4953%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 20247 +5807 +5289 +4998 +4540 +4540 +40.2147% +35.3590% +32.7759% +28.9043% +28.9043%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 19416 +4933 +4351 +4500 +4346 +4344 +34.0606% +28.8815% +30.1689% +28.8388% +28.8217%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 16815 +8075 +7439 +7426 +7451 +7430 +92.3913% +79.3409% +79.0926% +79.5707% +79.1689%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 16223 +7325 +6964 +6439 +6413 +6413 +82.3219% +75.2133% +65.8115% +65.3721% +65.3721%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 42169 +7304 +5872 +7827 +7744 +7744 +20.9494% +16.1776% +22.7913% +22.4953% +22.4953%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 31193 +6544 +5727 +6074 +5970 +5970 +26.5487% +22.4888% +24.1809% +23.6689% +23.6689%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 44672 +7984 +6996 +7023 +7251 +7213 +21.7619% +18.5689% +18.6539% +19.3768% +19.2557%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 46475 +6319 +4930 +6432 +6582 +6529 +15.7361% +11.8667% +16.0627% +16.4991% +16.3446%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 7694 +4028 +3745 +3485 +3448 +3448 +109.8745% +94.8341% +82.7988% +81.2058% +81.2058%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7575 +2276 +1964 +1720 +1509 +1508 +42.9515% +35.0027% +29.3766% +24.8764% +24.8558%
SCP_Astral_250pg_3ms 675 721 908 879 879 3951 +3276 +3230 +3043 +3072 +3072 +485.3333% +447.9889% +335.1322% +349.4881% +349.4881%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6191 +4755 +4453 +4046 +4028 +4026 +331.1281% +256.2140% +188.6247% +186.2228% +185.9584%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 12145 +4351 +4173 +3893 +3739 +3737 +55.8250% +52.3457% +47.1764% +44.4801% +44.4458%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12018 +2860 +2676 +2647 +2604 +2603 +31.2295% +28.6448% +28.2467% +27.6609% +27.6474%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8235 +6389 +5635 +5649 +5646 +346.0997% +216.7308% +218.4455% +218.0765%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 11013 +7139 +6858 +6239 +6208 +6209 +184.2798% +165.0542% +130.6871% +129.1988% +129.2465%
SCP_Astral_MBR 24110 24991 24570 24544 24527 30092 +5982 +5101 +5522 +5548 +5565 +24.8113% +20.4113% +22.4746% +22.6043% +22.6893%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 58677 +1978 +2884 +2786 +2786 +3.4886% +5.1691% +4.9847% +4.9847%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 61585 +6314 +6438 +11.4237% +11.6743%
EWZ_2P_MBR_Exploris_Human 48465 48473 53746 +5281 +5273 +10.8965% +10.8782%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 57450 +6204 +6273 +12.1063% +12.2575%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 78782 +5504 +5505 +7.5111% +7.5126%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 78782 +5504 +5505 +7.5111% +7.5126%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 91690 +3770 -1198 -2292 -1751 -2596 +4.2880% -1.2897% -2.4388% -1.8739% -2.7533%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67272 +3499 +3298 +3661 +4257 +1437 +5.4866% +5.1552% +5.7553% +6.7555% +2.1827%
MTAC_3P_Standard 64317 64464 64219 63385 65967 67876 +3559 +3412 +3657 +4491 +1909 +5.5335% +5.2929% +5.6946% +7.0853% +2.8939%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12871 +804 +901 +931 +632 +6.6628% +7.5272% +7.7973% +5.1638%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13213 +781 +742 +851 +885 +553 +6.2822% +5.9498% +6.8840% +7.1788% +4.3681%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12711 +703 +664 +751 +743 +531 +5.8544% +5.5117% +6.2793% +6.2082% +4.3596%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13323 +762 +858 +846 +913 +549 +6.0664% +6.8833% +6.7805% +7.3570% +4.2978%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 157974 +11750 +4440 +3984 +2147 +688 +8.0356% +2.8919% +2.5872% +1.3778% +0.4374%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11491 +2328 +1963 +1906 +2157 +1469 +25.4065% +20.6024% +19.8852% +23.1091% +14.6578%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11419 +2121 +1658 +2007 +1866 +1430 +22.8114% +16.9860% +21.3238% +19.5331% +14.3157%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9408 +6958 +3324 +3161 +3292 +3059 +284% +54.6351% +50.6003% +53.8260% +48.1808%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6459 +1756 +1871 +1501 +1536 +1510 +37.3379% +40.7803% +30.2743% +31.2005% +30.5112%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17516 +1326 +1236 +1491 +1461 +980 +8.1902% +7.5921% +9.3042% +9.1000% +5.9265%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14933 +1334 +1092 +1245 +1262 +949 +9.8095% +7.8896% +9.0956% +9.2312% +6.7863%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17662 +1410 +1386 +1545 +1737 +1204 +8.6759% +8.5156% +9.5862% +10.9074% +7.3156%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18291 +1274 +1113 +1378 +1546 +942 +7.4866% +6.4792% +8.1476% +9.2326% +5.4297%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5552 +1905 +1639 +1688 +2013 +1738 +52.2347% +41.8860% +43.6853% +56.8805% +45.5690%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5548 +1248 +945 +751 +571 +379 +29.0233% +20.5301% +15.6556% +11.4728% +7.3322%
SCP_Astral_250pg_3ms 576 22 936 741 736 2592 +2016 +2570 +1656 +1851 +1856 +350% +11681.8182% +176.9231% +249.7976% +252.1739%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4473 +3836 +2393 +2444 +2427 +2405 +602.1978% +115.0481% +120.4534% +118.6217% +116.2959%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7564 +1319 +1218 +1548 +1437 +1345 +21.1209% +19.1932% +25.7314% +23.4536% +21.6273%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7772 +1050 +1043 +760 +749 +430 +15.6204% +15.5001% +10.8386% +10.6650% +5.8567%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5263 +4281 +2898 +3086 +3027 +435.9470% +122.5370% +141.7547% +135.3757%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7190 +3482 +3183 +3145 +3272 +3087 +93.9051% +79.4360% +77.7503% +83.5120% +75.2376%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21078 +913 +949 +1004 +1285 +1180 +4.5276% +4.7146% +5.0015% +6.4922% +5.9302%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4908 +223 +208 +276 +169 +4.7599% +4.4255% +5.9585% +3.5662%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 249037 +3778 +1615 +1.5404% +0.6527%
EWZ_2P_MBR_Exploris_Human 115447 117345 116045 +598 -1300 +0.5180% -1.1078%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 133064 +4096 +2358 +3.1760% +1.8040%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 191659 +13485 +8116 +7.5684% +4.4219%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 191659 +13485 +8116 +7.5684% +4.4219%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8365 +520 +190 +210 +162 +116 +6.6284% +2.3242% +2.5751% +1.9749% +1.4062%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12133 +772 +639 +782 +795 +335 +6.7952% +5.5594% +6.8893% +7.0118% +2.8395%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12295 +822 +735 +818 +899 +463 +7.1646% +6.3581% +7.1273% +7.8887% +3.9131%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4429 +301 +337 +329 +246 +7.2917% +8.2356% +8.0244% +5.8809%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4535 +320 +287 +317 +321 +198 +7.5919% +6.7561% +7.5154% +7.6175% +4.5654%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4356 +281 +222 +266 +259 +171 +6.8957% +5.3701% +6.5037% +6.3217% +4.0860%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4558 +309 +321 +314 +327 +204 +7.2723% +7.5761% +7.3987% +7.7287% +4.6853%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7935 +680 +353 +595 +456 +398 +9.3728% +4.6558% +8.1063% +6.0971% +5.2806%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4143 +898 +754 +732 +825 +582 +27.6733% +22.2485% +21.4600% +24.8644% +16.3437%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4070 +816 +637 +779 +636 +578 +25.0768% +18.5552% +23.6706% +18.5207% +16.5521%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3491 +1041 +1095 +1041 +1094 +1057 +42.4898% +45.7012% +42.4898% +45.6404% +43.4265%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3448 +940 +1012 +814 +806 +865 +37.4801% +41.5435% +30.9036% +30.5072% +33.4882%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6083 +504 +427 +579 +537 +429 +9.0339% +7.5495% +10.5196% +9.6827% +7.5875%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5200 +479 +362 +417 +389 +356 +10.1462% +7.4824% +8.7184% +8.0856% +7.3493%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6185 +574 +530 +589 +632 +472 +10.2299% +9.3722% +10.5254% +11.3812% +8.2619%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6344 +498 +395 +501 +539 +379 +8.5186% +6.6398% +8.5744% +9.2851% +6.3537%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2097 +805 +673 +691 +809 +738 +62.3065% +47.2612% +49.1465% +62.8106% +54.3046%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2009 +441 +349 +251 +136 +139 +28.1250% +21.0241% +14.2776% +7.2611% +7.4332%
SCP_Astral_250pg_3ms 307 8 350 283 281 1087 +780 +1079 +737 +804 +806 +254.0717% +13487.5000% +210.5714% +284.0989% +286.8327%
SCP_Astral_250pg_6ms 637 756 751 766 767 1719 +1082 +963 +968 +953 +952 +169.8587% +127.3810% +128.8948% +124.4125% +124.1199%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2742 +535 +467 +573 +512 +525 +24.2411% +20.5275% +26.4177% +22.9596% +23.6806%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2809 +406 +421 +332 +270 +211 +16.8955% +17.6298% +13.4033% +10.6341% +8.1216%
SCP_Astral_500pg_3ms 525 902 828 835 2044 +1519 +1142 +1216 +1209 +289.3333% +126.6075% +146.8599% +144.7904%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2665 +1347 +1218 +1179 +1230 +1197 +102.2003% +84.1742% +79.3405% +85.7143% +81.5395%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5105 +397 +385 +393 +390 +389 +8.4325% +8.1568% +8.3404% +8.2715% +8.2485%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4908 +223 +208 +276 +169 +4.7599% +4.4255% +5.9585% +3.5662%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7185 +144 +79 +2.0452% +1.1117%
EWZ_2P_MBR_Exploris_Human 6167 6284 6224 +57 -60 +0.9243% -0.9548%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7169 +282 +206 +4.0947% +2.9585%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6253 +449 +298 +7.7360% +5.0042%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6253 +449 +298 +7.7360% +5.0042%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 91683 -2596
MTAC_3P_Alternating 65832 67264 +1432
MTAC_3P_Standard 65967 67869 +1902
MTAC_Yeast_Alternating_3min 12239 12865 +626
MTAC_Yeast_Alternating_5min 12660 13200 +540
MTAC_Yeast_Standard_3min 12180 12709 +529
MTAC_Yeast_Standard_5min 12772 13322 +550
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 157968 +683
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11491 +1469
SCP_Astral_1000pg_24ms 9989 11419 +1430
SCP_Astral_1000pg_3ms 6349 9406 +3057
SCP_Astral_1000pg_6ms 4949 6451 +1502
SCP_Astral_10ng_12ms 16536 17515 +979
SCP_Astral_10ng_24ms 13982 14933 +951
SCP_Astral_10ng_3ms 16458 17659 +1201
SCP_Astral_10ng_6ms 17349 18291 +942
SCP_Astral_250pg_12ms 3814 5552 +1738
SCP_Astral_250pg_24ms 5169 5548 +379
SCP_Astral_250pg_3ms 736 2592 +1856
SCP_Astral_250pg_6ms 2066 4473 +2407
SCP_Astral_500pg_12ms 6219 7564 +1345
SCP_Astral_500pg_24ms 7342 7772 +430
SCP_Astral_500pg_3ms 2234 5260 +3026
SCP_Astral_500pg_6ms 4103 7188 +3085
SCP_Astral_MBR 19891 21078 +1187
Seer_Astral_45 242898
Seer_Astral_single 4739 4908 +169
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 249031 +1609
EWZ_2P_MBR_Exploris_Human 117340 116039 -1301
EWZ_2P_MBR_Exploris_YeastHuman 130702 133054 +2352
MacCoss_Eclipse_Normalization_noNorm 183540 191659 +8119
MacCoss_Eclipse_Normalization_yesNorm 183540 191659 +8119

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0010 +0.0001 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0003 +0.0003 +0.0003
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0007 -0.0002 -0.0006 +0.0003 +0.0001 +0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0005 +0.0008 -0.0010 +0.0000 +0.0002 +0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0013 +0.0003 +0.0006 +0.0013 +0.0013
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0007 -0.0003 +0.0005 +0.0007 +0.0007 +0.0007
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0003 +0.0016 +0.0011 +0.0009 +0.0017 +0.0017
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0003 +0.0007 +0.0016 +0.0021 +0.0022
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0005 -0.0011 -0.0011
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 -0.0000 +0.0002 -0.0003 +0.0011 -0.0005 -0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0024 -0.0002 +0.0005 -0.0004
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0010 +0.0064 +0.0043 +0.0041 +0.0056 +0.0056
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0013 +0.0043 +0.0061 +0.0043 +0.0051 +0.0059
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0004 +0.0006 +0.0015 +0.0040 +0.0030 +0.0030
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0005 +0.0027 +0.0022 +0.0029 +0.0029
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0004 +0.0016 -0.0013 +0.0011 +0.0009 +0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0006 +0.0030 +0.0032 +0.0024 +0.0023 +0.0023
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0002 +0.0005 -0.0003 +0.0019 +0.0009 +0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0002 +0.0041 +0.0042 -0.0001 +0.0054 +0.0054
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0003 -0.0001 +0.0009 +0.0021 +0.0028 +0.0028
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 -0.0015 +0.0054 -0.0015 -0.0015
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0041 +0.0091 +0.0067 +0.0090 +0.0085
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0006 +0.0027 +0.0016 +0.0033 +0.0032 +0.0032
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0012 +0.0025 +0.0036 +0.0024 +0.0023 +0.0023
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0027 +0.0040 +0.0049 +0.0062 +0.0062
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0050 +0.0081 +0.0082 +0.0065 +0.0065
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0002 +0.0028 +0.0021 +0.0016 +0.0024 +0.0024
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0009 +0.0030 +0.0030
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0010 +0.0016 +0.0017
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0020 +0.0010 -0.0006
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0035 -0.0025 -0.0024 -0.0041 -0.0042 -0.0025
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0014 -0.0001 +0.0011 +0.0015 +0.0012 +0.0029
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0014 +0.0052 +0.0039 +0.0034 +0.0030
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0023 +0.0064 +0.0061 +0.0071 +0.0056 +0.0080
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0040 +0.0018 +0.0007 -0.0020 -0.0012 -0.0016
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 -0.0007 +0.0029 +0.0038 +0.0049 +0.0048
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0022 -0.0019 +0.0009
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0005 +0.0024 -0.0003 +0.0023 +0.0004 +0.0012
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0028 +0.0021 +0.0013 +0.0014 +0.0012
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0032 +0.0038 +0.0026 +0.0038 +0.0039 +0.0051
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0013 +0.0046 +0.0046 +0.0059 +0.0058 +0.0073
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0013 +0.0031 +0.0063 +0.0056 +0.0058 +0.0060
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0034 +0.0021 +0.0006 +0.0020 +0.0027
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0008 +0.0024 +0.0015 +0.0008 +0.0037 +0.0028
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0014 +0.0050 +0.0087 +0.0080 +0.0074 +0.0074
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0032 +0.0022 -0.0012 +0.0022 +0.0014 +0.0017
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0059 -0.0006 +0.0017 -0.0025 +0.0005 +0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0006 +0.0048 +0.0048 +0.0032 +0.0019 +0.0049
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0041 -0.0013 -0.0041 +0.0044 -0.0041 -0.0041
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0087 +0.0185 +0.0153 +0.0171 +0.0175 +0.0175
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0016 +0.0019 +0.0023 -0.0031 +0.0004 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0021 +0.0041 +0.0022 +0.0072 +0.0082 +0.0081
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0057 +0.0099 -0.0014 +0.0037 +0.0058 +0.0059
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0031 +0.0076 +0.0076 +0.0039 +0.0087 +0.0074
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0006 +0.0053 +0.0024 +0.0019 +0.0044 +0.0050
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0053 +0.0128 +0.0127
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0003 +0.0009 +0.0009
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0001 +0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0000 +0.0001 -0.0003 +0.0002 +0.0001 +0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0001 +0.0010 -0.0001 +0.0005 +0.0004 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0005 +0.0005 +0.0008 +0.0009 +0.0009
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0004 +0.0008 +0.0011 +0.0014 +0.0012 +0.0012
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 -0.0001 +0.0008 +0.0007 +0.0007 +0.0010 +0.0010
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0001 +0.0009 +0.0011 +0.0015 +0.0016
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0002 -0.0001 -0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0005 +0.0009 -0.0000 +0.0011 +0.0005 +0.0005
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0012 +0.0003 +0.0018 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0005 +0.0051 +0.0034 +0.0036 +0.0043 +0.0043
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0018 +0.0038 +0.0047 +0.0044 +0.0044 +0.0052
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0004 +0.0003 +0.0010 +0.0032 +0.0028 +0.0028
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0006 +0.0022 +0.0016 +0.0021 +0.0021
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0000 +0.0014 -0.0003 +0.0012 +0.0008 +0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0008 +0.0028 +0.0028 +0.0024 +0.0023 +0.0023
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0003 +0.0002 -0.0005 +0.0009 +0.0005 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0002 +0.0032 +0.0028 +0.0004 +0.0033 +0.0033
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0003 +0.0010 +0.0011 +0.0016 +0.0017 +0.0017
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 -0.0005 +0.0054 -0.0005 -0.0005
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0037 +0.0074 +0.0058 +0.0067 +0.0067
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0010 +0.0029 +0.0014 +0.0030 +0.0023 +0.0023
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0015 +0.0031 +0.0033 +0.0033 +0.0032 +0.0032
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0037 +0.0018 +0.0040 +0.0053 +0.0053
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0045 +0.0070 +0.0064 +0.0055 +0.0055
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0013 +0.0030 +0.0028 +0.0021 +0.0026 +0.0026
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0009 +0.0030 +0.0030
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0005 +0.0016 +0.0018
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0014 +0.0003 -0.0007
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0016 -0.0015 -0.0014 -0.0019 -0.0019 -0.0011
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0003 +0.0006 +0.0011 +0.0018 +0.0016 +0.0021
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0002 +0.0035 +0.0032 +0.0028 +0.0020
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0029 +0.0066 +0.0050 +0.0054 +0.0042 +0.0054
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0016 +0.0022 +0.0019 -0.0003 -0.0001 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 -0.0010 +0.0013 +0.0017 +0.0027 +0.0024
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0012 -0.0008 +0.0008
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 0.0005 +0.0031 -0.0001 +0.0022 +0.0021 +0.0024
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0009 +0.0028 +0.0014 +0.0023 +0.0030
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0020 +0.0029 +0.0036 +0.0038 +0.0023 +0.0040
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0020 +0.0024 +0.0013 +0.0021 +0.0011 +0.0044
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0004 +0.0028 +0.0038 +0.0044 +0.0044 +0.0036
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0029 +0.0018 +0.0002 +0.0013 +0.0015
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0011 +0.0021 +0.0003 +0.0004 +0.0015 +0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0003 +0.0024 +0.0049 +0.0041 +0.0036 +0.0043
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0029 +0.0009 -0.0010 +0.0009 +0.0000 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0036 +0.0003 +0.0005 -0.0017 -0.0006 +0.0009
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0019 +0.0032 +0.0050 +0.0022 +0.0019 +0.0047
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0025 +0.0035 +0.0057 +0.0022 -0.0025 -0.0025
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0081 +0.0181 +0.0149 +0.0136 +0.0128 +0.0129
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0007 +0.0032 +0.0028 +0.0000 +0.0020 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0007 +0.0026 +0.0006 +0.0050 +0.0051 +0.0074
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0073 +0.0105 +0.0006 +0.0045 +0.0069 +0.0070
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0051 +0.0071 +0.0073 +0.0042 +0.0079 +0.0069
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0007 +0.0031 +0.0025 +0.0030 +0.0036 +0.0048
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0055 +0.0129 +0.0124
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 19531 -4864 -5057

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 470 -301 -292

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0241 -0.0075 -0.0069

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 -72 -916 +557

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -38 -228 -94

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 0 +0 +1 +0 +0 -2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1671 +0.0212 +0.0250 +0.0271 +0.0297 +0.0296
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1601 +0.0208 +0.0238 +0.0249 +0.0277 +0.0276
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1623 +0.0168 +0.0199 +0.0215 +0.0214
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1544 +0.0013 +0.0135 +0.0168 +0.0188 +0.0189
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1747 +0.0050 +0.0108 +0.0132 +0.0148 +0.0150
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1495 -0.0008 +0.0129 +0.0158 +0.0173 +0.0172
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1542 +0.0062 +0.0042 +0.0046 +0.0037 +0.0036
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5972 +0.0103 +0.0103
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2115 +0.0399 +0.0398

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0855 +0.0091 +0.0116 +0.0128 +0.0134 +0.0097
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0812 +0.0088 +0.0109 +0.0112 +0.0124 +0.0094
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0751 +0.0079 +0.0091 +0.0093 +0.0064
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0657 -0.0120 +0.0054 +0.0065 +0.0069 +0.0056
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0778 -0.0014 +0.0022 +0.0025 +0.0006 +0.0003
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0641 -0.0130 +0.0074 +0.0072 +0.0072 +0.0057
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1014 -0.0014 -0.0005 -0.0022 -0.0013 -0.0019
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5787 -0.0094 -0.0093
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1352 +0.0119 +0.0106

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0100 -0.0020 +0.0070 +0.0012 +0.0000 -0.0677
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0040 -0.0076 +0.0055 -0.0002 -0.0001 -0.0367
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0001 +0.0007 -0.0023 -0.0001 -0.0000 -0.0008
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0611 +0.0012 -0.0008 +0.0020 -0.0002 -0.0656
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0598 -0.0054 -0.0006 -0.0003 +0.0001 -0.0125
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0513 -0.0080 +0.0050 -0.0016 -0.0001 +0.0224
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1293 -0.0059 -0.0059 +0.0211 -0.0012 -0.1059
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0810 +0.0062 +0.0047 -0.0191 -0.0001 +0.0207
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1982 +0.0183 -0.0240 +0.0287 +0.0020 -0.0824
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1043 +0.0048 -0.0054 -0.0067 +0.0002 +0.0158
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0467 +0.0009 +0.0001 -0.0089 -0.0000 +0.0011
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2072 +0.0051 -0.0017 +0.0004 +0.0004 +0.0032
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1343 -0.0032 -0.0062 -0.0160 +0.0006 +0.1112
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0802 +0.0043 -0.0045 -0.0054 -0.0001 -0.0217
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0471 +0.0169 -0.0238 +0.0355 +0 -0.0493
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0194 +0.0009 +0.0076 -0.0005 +0.0006 -0.0546
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0033 -0.0089 +0.0045 +0.0004 +0.0011 -0.0389
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0089 +0.0054 -0.0044 +0.0010 +0.0033 +0.0020
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0574 +0.0013 +0.0005 -0.0055 +0.0004 -0.0636
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0622 -0.0060 -0.0005 -0.0005 -0.0005 -0.0075
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0522 -0.0084 +0.0078 -0.0007 +0.0020 +0.0192
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1559 -0.0077 -0.0028 +0.0144 -0.0004 -0.0648
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0752 +0.0048 +0.0016 -0.0170 -0.0057 +0.0252
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2429 +0.0504 -0.0481 +0.0073 +0.0089 -0.0314
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1035 +0.0031 -0.0032 -0.0081 +0.0006 +0.0269
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0446 +0.0011 -0.0008 -0.0084 -0.0000 +0.0025
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2194 +0.0036 -0.0008 +0.0016 +0.0018 +0.0143
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1101 +0.0005 -0.0096 -0.0297 +0.0070 +0.0985
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0834 +0.0056 -0.0034 -0.0033 +0.0038 -0.0289
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0538 +0.0405 -0.0089 +0.0322 +0.0276 -0.0911
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1375 +0.0343 +0.0202 -0.0086 +0.0005 -0.1709
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1210 +0.0169 -0.0058 +0.0004 +0.0004 -0.0893
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1248 +0.0117 -0.0078 +0.0011 -0.0001 -0.1359
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1384 +0.0441 -0.0007 -0.0136 +0.0007 -0.1603
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1301 +0.0164 -0.0031 -0.0002 +0.0007 -0.0899
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1308 +0.0170 -0.0063 +0.0017 +0.0006 -0.1378
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2093 +0.0445 +0.0761 -0.1281 +0.0017 -0.3633
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0439 -0.0103 +0.0134 -0.0147 -0.0018 -0.1055
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2954 -0.0030 +0.1483 +0.0078 -0.0120 -0.6500
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1876 +0.0037 +0.0045 +0.0051 +0.0002 -0.1631
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0433 +0.0676 -0.0087 -0.0168 +0.0006 -0.1090
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1856 +0.0316 +0.0062 -0.0049 +0.0001 -0.1498
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2372 -0.0093 +0.0378 -0.0706 +0.0033 -0.3428
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0629 +0.0977 -0.0155 +0.0159 +0.0001 -0.1850
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5462 +0.0737 +0.1982 -0.0827 -0.0008 -0.7281
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0657 +0.0149 -0.0182 -0.0054 +0.1015 -0.1566
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0387 +0.0035 +0.0005 +0.0043 +0.0189 -0.0617
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0488 -0.0157 -0.0104 +0.0083 +0.0352 -0.0986
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0565 -0.0042 +0.0002 -0.0084 +0.0711 -0.1342
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0373 +0.0032 -0.0030 +0.0035 +0.0313 -0.0656
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0553 +0.0000 +0.0073 -0.0081 +0.0305 -0.1006
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0501 +0.0146 +0.0452 -0.0355 +0.0761 -0.2536
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0163 -0.0057 -0.0062 -0.0031 +0.0154 -0.0477
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0570 -0.1294 +0.1626 +0.0090 +0.0813 -0.5248
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0334 -0.0046 +0.0074 +0.0016 +0.0039 -0.0396
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0103 +0.0109 -0.0066 +0.0090 -0.0065 -0.0265
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0398 -0.0053 +0.0093 +0.0025 +0.0083 -0.0509
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0909 -0.0166 +0.0170 -0.0166 +0.0315 -0.1581
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0220 +0.0068 -0.0006 -0.0039 +0.0560 -0.1078
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.2314 -0.0891 -0.0032 -0.0082 +0.0618 -0.2608
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 19.4200 -4.6500 +2.1000 -0.4500 +2.2900 +0.3900 -19.3187% +12.1247% -2.2647% +13.3684% +2.0494%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10.3300 -2.4200 +1.2600 +1.9700 +1.0400 +2.2000 -18.9804% +13.8920% +23.5646% +11.1948% +27.0603%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.7400 -2.5700 +0.7800 +0.0800 -1.0700 -0.0500 -20.8773% +8.7054% +0.8282% -9.8982% -0.5107%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.1600 +0.9300 +0.7500 +0.2200 +0.8800 +21.9858% +17.0068% +4.4534% +20.5607%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.2300 -0.1500 +0.8500 +0.4800 +0.6900 +0.6700 -2.7881% +19.4064% +10.1053% +15.1982% +14.6930%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.2500 -0.1800 +1.1100 +0.8100 +0.5900 +1.0100 -3.3149% +26.8116% +18.2432% +12.6609% +23.8208%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.9700 -0.5800 +0.5500 +0.4400 +0.5100 +0.4300 -10.4505% +12.4434% +9.7130% +11.4350% +9.4714%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 16.3900 -11.2700 -3.3700 -1.9300 -2.8900 -1.5100 -40.7448% -17.0547% -10.5349% -14.9896% -8.4358%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.4600 -1.3300 -0.1300 -0.1900 +0.3700 +0.1000 -22.9706% -2.8322% -4.0860% +9.0465% +2.2936%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.0700 -1.1900 +0.6700 -0.8100 +0.0600 -19.0096% +15.2273% -13.7755% +1.1976%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.1400 +0.6200 +1.4100 +0.3400 +1.5000 +1.3100 +13.7168% +37.8016% +7.0833% +41.2088% +34.2037%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.0400 -1.7000 +0.5300 +0.1200 +0.6000 +0.3200 -29.6167% +15.0997% +3.0612% +17.4419% +8.6022%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.3100 -0.7600 +0.7800 +0.8000 +0.5700 +0.8400 -10.7496% +14.1049% +14.5191% +9.9303% +15.3565%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.1600 -1.4300 +0.4300 +0.0200 +0.6200 +0.2700 -18.8406% +7.5044% +0.3257% +11.1913% +4.5840%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.7600 -0.6900 +1.0900 +1.4600 +1.3500 +1.3400 -10.6977% +23.3405% +33.9535% +30.6122% +30.3167%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 5.8600 -1.5200 +0.9300 +1.2300 +0.2400 +0.9000 -20.5962% +18.8641% +26.5659% +4.2705% +18.1452%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.4600 -0.2800 +0.8000 +1.0700 +0.8700 -5.9072% +21.8579% +31.5634% +24.2340%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.5200 -0.7400 +0.6800 +0.7600 +0.4600 -14.0684% +17.7083% +20.2128% +11.3300%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 3.9200 -0.7300 +0.4900 +0.2100 +0.4700 +0.3700 -15.6989% +14.2857% +5.6604% +13.6232% +10.4225%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.2300 +0.0600 +0.9400 +0.5400 +0.9600 +0.7100 +1.4388% +28.5714% +14.6341% +29.3578% +20.1705%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.5000 -0.7800 +0.9700 +0.9000 +1.0100 +0.8000 -14.7727% +27.4788% +25.0000% +28.9398% +21.6216%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.6300 -0.8800 +0.8100 +0.4800 -0.1800 +0.6000 -15.9710% +21.2042% +11.5663% -3.7422% +14.8883%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.2600 -0.4700 +0.8000 +0.6900 +0.4900 -9.9366% +23.1214% +19.3277% +12.9973%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.9200 +0.2700 +1.3000 +1.1900 +1.1400 +1.4200 +5.8065% +35.9116% +31.9035% +30.1587% +40.5714%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.4300 -1.6100 +0.8800 +1.3300 +0.2200 -17.8097% +13.4351% +21.8033% +3.0513%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.4700 +1 +1.3300 -0.1100 +0.2500 +22.3714% +32.1256% -1.9713% +4.7893%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 25.8500 -0.3300 +1.5700 -1.2605% +6.4662%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 12.4000 -0.5100 -0.0200 -3.9504% -0.1610%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 13.4700 +1.4100 -0.9400 +11.6915% -6.5232%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 34.4900 +6.9800 +6.2100 +25.3726% +21.9590%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 35.2500 +7.5800 +6.7500 +27.3943% +23.6842%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png