Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1398242 +301748 +91237 +86287 +104701 +104701 +27.5193% +6.9806% +6.5770% +8.0941% +8.0941%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 713822 +127500 +98060 +103112 +113941 +113941 +21.7457% +15.9250% +16.8840% +18.9939% +18.9939%
MTAC_3P_Standard 596590 623022 617574 607435 607435 719184 +122594 +96162 +101610 +111749 +111749 +20.5491% +15.4348% +16.4531% +18.3969% +18.3969%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 163214 +25666 +26375 +27654 +27654 +18.6597% +19.2745% +20.3998% +20.3998%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 182886 +27245 +26335 +26377 +27851 +28042 +17.5050% +16.8220% +16.8533% +17.9643% +18.1098%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 163442 +24933 +24057 +24150 +25557 +25655 +18.0010% +17.2594% +17.3377% +18.5350% +18.6193%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 183059 +24097 +24327 +23899 +25137 +25137 +15.1590% +15.3258% +15.0157% +15.9174% +15.9174%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1386309 +363573 +231640 +262436 +202225 +202225 +35.5491% +20.0612% +23.3510% +17.0786% +17.0786%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 58518 +17636 +16818 +16093 +16418 +16418 +43.1388% +40.3309% +37.9328% +38.9976% +38.9976%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 56248 +15179 +13846 +14225 +15096 +15096 +36.9598% +32.6541% +33.8505% +36.6835% +36.6835%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 46136 +37396 +23021 +23121 +23223 +23223 +427.8719% +99.5933% +100.4606% +101.3529% +101.3529%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31976 +15041 +14423 +13567 +13628 +13628 +88.8161% +82.1683% +73.6976% +74.2751% +74.2751%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 126450 +26542 +23559 +27467 +27802 +27802 +26.5664% +22.8970% +27.7492% +28.1830% +28.1830%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 92765 +21667 +20037 +21320 +21639 +21639 +30.4748% +27.5506% +29.8411% +30.4235% +30.4235%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 135522 +29818 +29025 +29900 +31088 +31010 +28.2090% +27.2543% +28.3085% +29.7681% +29.6712%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 142547 +27390 +25231 +28225 +29466 +29297 +23.7849% +21.5069% +24.6890% +26.0574% +25.8693%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 21471 +11277 +10665 +10233 +10238 +10238 +110.6239% +98.6952% +91.0571% +91.1422% +91.1422%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 22347 +7540 +6914 +6306 +6648 +6648 +50.9219% +44.8001% +39.3118% +42.3466% +42.3466%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 9155 +7894 +7123 +6705 +6769 +6769 +626.0111% +350.5413% +273.6735% +283.6966% +283.6966%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 16461 +15025 +11678 +10771 +10730 +10730 +1046.3092% +244.1564% +189.2970% +187.2274% +187.2274%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 34468 +12758 +12573 +11888 +12005 +12005 +58.7655% +57.4241% +52.6484% +53.4434% +53.4434%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 35481 +9621 +9338 +9221 +9856 +9856 +37.2042% +35.7189% +35.1142% +38.4624% +38.4624%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20505 +17021 +13607 +13671 +13671 +488.5476% +197.2601% +200.0439% +200.0439%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 30314 +19615 +18840 +17432 +17425 +17425 +183.3349% +164.1973% +135.3206% +135.1928% +135.1928%
SCP_Astral_MBR 92167 93585 91884 90864 90838 121260 +29093 +27675 +29376 +30396 +30422 +31.5655% +29.5720% +31.9707% +33.4522% +33.4904%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1997235 +221107 +221889 +12.4488% +12.4984%
EWZ_2P_MBR_Exploris_Human 836809 836809 941299 +104490 +104490 +12.4867% +12.4867%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1052305 +137381 +138356 +15.0156% +15.1383%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2368932 +290898 +290896 +13.9987% +13.9986%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2368932 +290898 +290896 +13.9987% +13.9986%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 154181 +42677 +20562 +22822 +22150 +22150 +38.2740% +15.3885% +17.3738% +16.7764% +16.7764%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 136995 +28728 +19643 +22336 +22179 +22179 +26.5344% +16.7385% +19.4804% +19.3170% +19.3170%
MTAC_3P_Standard 110265 118693 115800 116148 116148 138545 +28280 +19852 +22745 +22397 +22397 +25.6473% +16.7255% +19.6416% +19.2832% +19.2832%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 59625 +10767 +10593 +10630 +10630 +22.0373% +21.6043% +21.6961% +21.6961%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 66280 +12311 +11205 +10440 +10396 +10459 +22.8112% +20.3450% +18.6963% +18.6028% +18.7367%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 60534 +11913 +10869 +10245 +10074 +10119 +24.5018% +21.8846% +20.3722% +19.9643% +20.0714%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66649 +11589 +10730 +9942 +9822 +9822 +21.0479% +19.1885% +17.5322% +17.2840% +17.2840%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75425 +24153 +16641 +20378 +16832 +16860 +47.1076% +28.3087% +37.0193% +28.7270% +28.7885%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21890 +7450 +6932 +6641 +6183 +6183 +51.5928% +46.3431% +43.5504% +39.3646% +39.3646%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20754 +6271 +5689 +5838 +5684 +5682 +43.2990% +37.7630% +39.1392% +37.7173% +37.6990%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18728 +9988 +9352 +9339 +9364 +9343 +114.2792% +99.7440% +99.4675% +100% +99.5525%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17846 +8948 +8587 +8062 +8036 +8036 +100.5619% +92.7422% +82.3998% +81.9164% +81.9164%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 45143 +10278 +8846 +10801 +10718 +10718 +29.4794% +24.3712% +31.4513% +31.1344% +31.1344%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 33525 +8876 +8059 +8406 +8302 +8302 +36.0096% +31.6461% +33.4647% +32.9144% +32.9144%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 49309 +12621 +11633 +11660 +11888 +11850 +34.4009% +30.8764% +30.9703% +31.7683% +31.6346%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50746 +10590 +9201 +10703 +10853 +10800 +26.3721% +22.1471% +26.7288% +27.2053% +27.0365%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8489 +4823 +4540 +4280 +4243 +4243 +131.5603% +114.9658% +101.6869% +99.9293% +99.9293%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8630 +3331 +3019 +2775 +2564 +2563 +62.8609% +53.8050% +47.3954% +42.2684% +42.2449%
SCP_Astral_250pg_3ms 675 721 908 879 879 4403 +3728 +3682 +3495 +3524 +3524 +552.2963% +510.6796% +384.9119% +400.9101% +400.9101%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6926 +5490 +5188 +4781 +4763 +4761 +382.3120% +298.5040% +222.8904% +220.2034% +219.9076%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13496 +5702 +5524 +5244 +5090 +5088 +73.1588% +69.2925% +63.5482% +60.5520% +60.5138%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 13227 +4069 +3885 +3856 +3813 +3812 +44.4311% +41.5864% +41.1482% +40.5035% +40.4886%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 8940 +7094 +6340 +6354 +6351 +384.2904% +243.8462% +245.7077% +245.3071%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12021 +8147 +7866 +7247 +7216 +7217 +210.2994% +189.3141% +151.8014% +150.1769% +150.2290%
SCP_Astral_MBR 24110 24991 24570 24544 24527 33173 +9063 +8182 +8603 +8629 +8646 +37.5902% +32.7398% +35.0142% +35.1573% +35.2509%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64055 +8784 +8908 +15.8926% +16.1532%
EWZ_2P_MBR_Exploris_Human 48465 48473 55856 +7391 +7383 +15.2502% +15.2312%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 59957 +8711 +8780 +16.9984% +17.1561%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80847 +7569 +7570 +10.3292% +10.3307%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80847 +7569 +7570 +10.3292% +10.3307%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 93223 +5303 +335 -759 -218 -1063 +6.0316% +0.3606% -0.8076% -0.2333% -1.1274%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 70200 +6427 +6226 +6589 +7185 +4365 +10.0779% +9.7321% +10.3583% +11.4020% +6.6302%
MTAC_3P_Standard 64317 64464 64219 63385 65967 70829 +6512 +6365 +6610 +7444 +4862 +10.1249% +9.8737% +10.2929% +11.7441% +7.3704%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13233 +1166 +1263 +1293 +994 +9.6627% +10.5514% +10.8291% +8.1216%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13468 +1036 +997 +1106 +1140 +808 +8.3333% +7.9945% +8.9468% +9.2472% +6.3823%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 13042 +1034 +995 +1082 +1074 +862 +8.6109% +8.2593% +9.0468% +8.9739% +7.0772%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13574 +1013 +1109 +1097 +1164 +800 +8.0646% +8.8969% +8.7922% +9.3795% +6.2627%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 160571 +14347 +7037 +6581 +4744 +3285 +9.8117% +4.5833% +4.2737% +3.0444% +2.0886%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12483 +3320 +2955 +2898 +3149 +2461 +36.2327% +31.0139% +30.2347% +33.7369% +24.5560%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 12064 +2766 +2303 +2652 +2511 +2075 +29.7483% +23.5939% +28.1768% +26.2849% +20.7729%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 10216 +7766 +4132 +3969 +4100 +3867 +316.9796% +67.9158% +63.5345% +67.0373% +60.9072%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6991 +2288 +2403 +2033 +2068 +2042 +48.6498% +52.3758% +41.0044% +42.0069% +41.2609%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18237 +2047 +1957 +2212 +2182 +1701 +12.6436% +12.0209% +13.8034% +13.5908% +10.2866%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15688 +2089 +1847 +2000 +2017 +1704 +15.3614% +13.3444% +14.6113% +14.7539% +12.1854%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18828 +2576 +2552 +2711 +2903 +2370 +15.8504% +15.6795% +16.8207% +18.2292% +14.4003%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19522 +2505 +2344 +2609 +2777 +2173 +14.7206% +13.6454% +15.4260% +16.5841% +12.5252%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 6218 +2571 +2305 +2354 +2679 +2404 +70.4963% +58.9062% +60.9213% +75.6994% +63.0309%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6428 +2128 +1825 +1631 +1451 +1259 +49.4884% +39.6481% +34.0004% +29.1541% +24.3567%
SCP_Astral_250pg_3ms 576 22 936 741 736 2587 +2011 +2565 +1651 +1846 +1851 +349.1319% +11659.0909% +176.3889% +249.1228% +251.4946%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4675 +4038 +2595 +2646 +2629 +2607 +633.9089% +124.7596% +130.4091% +128.4946% +126.0638%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8669 +2424 +2323 +2653 +2542 +2450 +38.8151% +36.6057% +44.0991% +41.4885% +39.3954%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8573 +1851 +1844 +1561 +1550 +1231 +27.5364% +27.4038% +22.2618% +22.0703% +16.7665%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5476 +4494 +3111 +3299 +3240 +457.6375% +131.5433% +151.5388% +144.9016%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7723 +4015 +3716 +3678 +3805 +3620 +108.2794% +92.7377% +90.9271% +97.1159% +88.2281%
SCP_Astral_MBR 20165 20129 20074 19793 19898 22061 +1896 +1932 +1987 +2268 +2163 +9.4024% +9.5981% +9.8984% +11.4586% +10.8704%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5084 +399 +384 +452 +345 +8.5165% +8.1702% +9.7582% +7.2800%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 256673 +11414 +9251 +4.6539% +3.7390%
EWZ_2P_MBR_Exploris_Human 115447 117345 119212 +3765 +1867 +3.2612% +1.5910%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 136685 +7717 +5979 +5.9837% +4.5744%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 195144 +16970 +11601 +9.5244% +6.3206%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 195144 +16970 +11601 +9.5244% +6.3206%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8519 +674 +344 +364 +316 +270 +8.5915% +4.2080% +4.4635% +3.8522% +3.2731%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12792 +1431 +1298 +1441 +1454 +994 +12.5957% +11.2928% +12.6949% +12.8241% +8.4252%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12811 +1338 +1251 +1334 +1415 +979 +11.6622% +10.8218% +11.6232% +12.4166% +8.2742%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4541 +413 +449 +441 +358 +10.0048% +10.9726% +10.7561% +8.5585%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4601 +386 +353 +383 +387 +264 +9.1578% +8.3098% +9.0801% +9.1837% +6.0872%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4474 +399 +340 +384 +377 +289 +9.7914% +8.2245% +9.3888% +9.2019% +6.9056%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4637 +388 +400 +393 +406 +283 +9.1316% +9.4406% +9.2601% +9.5958% +6.4998%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8151 +896 +569 +811 +672 +614 +12.3501% +7.5046% +11.0490% +8.9852% +8.1465%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4487 +1242 +1098 +1076 +1169 +926 +38.2743% +32.3989% +31.5450% +35.2321% +26.0039%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4305 +1051 +872 +1014 +871 +813 +32.2987% +25.4005% +30.8113% +25.3640% +23.2818%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3850 +1400 +1454 +1400 +1453 +1416 +57.1429% +60.6845% +57.1429% +60.6174% +58.1758%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3730 +1222 +1294 +1096 +1088 +1147 +48.7241% +53.1199% +41.6097% +41.1809% +44.4057%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6347 +768 +691 +843 +801 +693 +13.7659% +12.2171% +15.3161% +14.4428% +12.2568%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5493 +772 +655 +710 +682 +649 +16.3525% +13.5387% +14.8442% +14.1758% +13.3980%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6625 +1014 +970 +1029 +1072 +912 +18.0716% +17.1530% +18.3881% +19.3049% +15.9636%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6780 +934 +831 +937 +975 +815 +15.9767% +13.9687% +16.0363% +16.7959% +13.6630%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2333 +1041 +909 +927 +1045 +974 +80.5728% +63.8343% +65.9317% +81.1335% +71.6703%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2366 +798 +706 +608 +493 +496 +50.8929% +42.5301% +34.5848% +26.3214% +26.5241%
SCP_Astral_250pg_3ms 307 8 350 283 281 1102 +795 +1094 +752 +819 +821 +258.9577% +13675% +214.8571% +289.3993% +292.1708%
SCP_Astral_250pg_6ms 637 756 751 766 767 1747 +1110 +991 +996 +981 +980 +174.2543% +131.0847% +132.6232% +128.0679% +127.7705%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3167 +960 +892 +998 +937 +950 +43.4980% +39.2088% +46.0120% +42.0179% +42.8507%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3117 +714 +729 +640 +578 +519 +29.7129% +30.5276% +25.8377% +22.7649% +19.9769%
SCP_Astral_500pg_3ms 525 902 828 835 2123 +1598 +1221 +1295 +1288 +304.3810% +135.3659% +156.4010% +154.2515%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2867 +1549 +1420 +1381 +1432 +1399 +117.5266% +98.1341% +92.9341% +99.7909% +95.2997%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5348 +640 +628 +636 +633 +632 +13.5939% +13.3051% +13.4975% +13.4252% +13.4012%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5084 +399 +384 +452 +345 +8.5165% +8.1702% +9.7582% +7.2800%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7559 +518 +453 +7.3569% +6.3749%
EWZ_2P_MBR_Exploris_Human 6167 6284 6489 +322 +205 +5.2213% +3.2623%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7477 +590 +514 +8.5669% +7.3819%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6387 +583 +432 +10.0448% +7.2544%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6387 +583 +432 +10.0448% +7.2544%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 93217 -1062
MTAC_3P_Alternating 65832 70193 +4361
MTAC_3P_Standard 65967 70820 +4853
MTAC_Yeast_Alternating_3min 12239 13233 +994
MTAC_Yeast_Alternating_5min 12660 13467 +807
MTAC_Yeast_Standard_3min 12180 13039 +859
MTAC_Yeast_Standard_5min 12772 13571 +799
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 160571 +3286
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12481 +2459
SCP_Astral_1000pg_24ms 9989 12064 +2075
SCP_Astral_1000pg_3ms 6349 10213 +3864
SCP_Astral_1000pg_6ms 4949 6987 +2038
SCP_Astral_10ng_12ms 16536 18237 +1701
SCP_Astral_10ng_24ms 13982 15688 +1706
SCP_Astral_10ng_3ms 16458 18825 +2367
SCP_Astral_10ng_6ms 17349 19520 +2171
SCP_Astral_250pg_12ms 3814 6218 +2404
SCP_Astral_250pg_24ms 5169 6427 +1258
SCP_Astral_250pg_3ms 736 2587 +1851
SCP_Astral_250pg_6ms 2066 4675 +2609
SCP_Astral_500pg_12ms 6219 8669 +2450
SCP_Astral_500pg_24ms 7342 8572 +1230
SCP_Astral_500pg_3ms 2234 5473 +3239
SCP_Astral_500pg_6ms 4103 7723 +3620
SCP_Astral_MBR 19891 22061 +2170
Seer_Astral_45 242898
Seer_Astral_single 4739 5084 +345
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 256661 +9239
EWZ_2P_MBR_Exploris_Human 117340 119206 +1866
EWZ_2P_MBR_Exploris_YeastHuman 130702 136682 +5980
MacCoss_Eclipse_Normalization_noNorm 183540 195144 +11604
MacCoss_Eclipse_Normalization_yesNorm 183540 195144 +11604

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0011 -0.0000 -0.0000
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 0.0000 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 0.0001 +0.0006 +0.0002 +0.0011 +0.0008 +0.0008
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 0.0000 +0.0014 -0.0004 +0.0006 +0.0007 +0.0007
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0003 +0.0018 +0.0022 +0.0029 +0.0029
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0005 +0.0009 +0.0018 +0.0019 +0.0020 +0.0020
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 0.0012 +0.0031 +0.0025 +0.0024 +0.0032 +0.0032
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0015 +0.0026 +0.0035 +0.0039 +0.0040
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0004 -0.0002 -0.0002
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0008 +0.0009 +0.0005 +0.0019 +0.0003 +0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 0.0004 +0.0027 +0.0034 +0.0024
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0026 +0.0080 +0.0058 +0.0057 +0.0072 +0.0072
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0009 +0.0039 +0.0057 +0.0039 +0.0048 +0.0055
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0022 +0.0024 +0.0033 +0.0057 +0.0048 +0.0048
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0009 +0.0031 +0.0026 +0.0033 +0.0033
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0010 +0.0031 +0.0001 +0.0025 +0.0023 +0.0023
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0004 +0.0029 +0.0031 +0.0023 +0.0022 +0.0022
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0001 +0.0009 +0.0001 +0.0023 +0.0013 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0009 +0.0048 +0.0049 +0.0006 +0.0061 +0.0061
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0024 +0.0026 +0.0036 +0.0048 +0.0055 +0.0055
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0035 +0.0104 +0.0035 +0.0035
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0033 +0.0084 +0.0060 +0.0083 +0.0078
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0021 +0.0042 +0.0030 +0.0048 +0.0047 +0.0047
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0021 +0.0033 +0.0045 +0.0033 +0.0032 +0.0032
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0044 +0.0057 +0.0067 +0.0079 +0.0079
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0054 +0.0085 +0.0087 +0.0069 +0.0069
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0009 +0.0036 +0.0029 +0.0023 +0.0031 +0.0031
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0008 +0.0018 +0.0019
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0019 +0.0010 -0.0005
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0011 -0.0001 +0.0000 -0.0016 -0.0018 -0.0000
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0008 +0.0005 +0.0017 +0.0021 +0.0017 +0.0035
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0002 +0.0063 +0.0050 +0.0046 +0.0042
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0002 +0.0044 +0.0041 +0.0051 +0.0036 +0.0059
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0018 +0.0040 +0.0029 +0.0001 +0.0009 +0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0004 +0.0040 +0.0050 +0.0060 +0.0059
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0025 -0.0022 +0.0006
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0006 +0.0023 -0.0005 +0.0022 +0.0003 +0.0011
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0039 +0.0010 +0.0003 +0.0004 +0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0029 +0.0099 +0.0087 +0.0099 +0.0099 +0.0112
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0018 +0.0042 +0.0041 +0.0054 +0.0054 +0.0069
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0009 +0.0026 +0.0058 +0.0052 +0.0054 +0.0055
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0012 +0.0043 +0.0028 +0.0042 +0.0049
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0004 +0.0028 +0.0019 +0.0012 +0.0041 +0.0032
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0011 +0.0048 +0.0084 +0.0077 +0.0072 +0.0072
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0013 +0.0042 +0.0007 +0.0041 +0.0034 +0.0036
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0005 +0.0059 +0.0082 +0.0040 +0.0069 +0.0067
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0005 +0.0047 +0.0047 +0.0031 +0.0018 +0.0047
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0042 -0.0014 -0.0042 +0.0044 -0.0042 -0.0042
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0129 +0.0227 +0.0195 +0.0213 +0.0217 +0.0217
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0018 +0.0054 +0.0058 +0.0004 +0.0039 +0.0042
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0011 +0.0010 -0.0010 +0.0041 +0.0051 +0.0050
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0052 +0.0094 -0.0018 +0.0032 +0.0053 +0.0054
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 -0.0016 +0.0028 +0.0029 -0.0009 +0.0039 +0.0026
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0016 +0.0075 +0.0046 +0.0041 +0.0066 +0.0072
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0022 +0.0096 +0.0095
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0006 +0.0006 +0.0006
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0005 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0002 +0.0003 -0.0001 +0.0004 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0002 +0.0010 -0.0000 +0.0005 +0.0005 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0001 +0.0011 +0.0014 +0.0015 +0.0015
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0008 +0.0012 +0.0015 +0.0017 +0.0016 +0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0008 +0.0017 +0.0016 +0.0016 +0.0019 +0.0019
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0011 +0.0019 +0.0021 +0.0026 +0.0026
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0007 +0.0005 +0.0005
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0012 +0.0016 +0.0007 +0.0018 +0.0012 +0.0012
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0003 +0.0018 +0.0033 +0.0022
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0017 +0.0063 +0.0045 +0.0048 +0.0054 +0.0054
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0010 +0.0030 +0.0039 +0.0036 +0.0036 +0.0044
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0020 +0.0018 +0.0025 +0.0047 +0.0043 +0.0043
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0004 +0.0020 +0.0013 +0.0019 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0005 +0.0018 +0.0001 +0.0017 +0.0013 +0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0004 +0.0024 +0.0025 +0.0020 +0.0019 +0.0019
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0005 +0.0010 +0.0002 +0.0017 +0.0013 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0008 +0.0038 +0.0035 +0.0010 +0.0039 +0.0039
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0023 +0.0030 +0.0031 +0.0036 +0.0037 +0.0037
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0028 +0.0087 +0.0028 +0.0028
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0028 +0.0065 +0.0049 +0.0058 +0.0058
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0019 +0.0038 +0.0023 +0.0039 +0.0032 +0.0032
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0022 +0.0038 +0.0040 +0.0040 +0.0039 +0.0039
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0048 +0.0030 +0.0052 +0.0064 +0.0064
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0041 +0.0066 +0.0060 +0.0051 +0.0051
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0013 +0.0031 +0.0028 +0.0021 +0.0026 +0.0026
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0006 +0.0018 +0.0020
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0008 +0.0008 -0.0002
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0005 -0.0004 -0.0003 -0.0008 -0.0007 +0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 0.0001 +0.0009 +0.0014 +0.0021 +0.0019 +0.0024
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0002 +0.0035 +0.0032 +0.0028 +0.0020
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0015 +0.0053 +0.0037 +0.0040 +0.0029 +0.0040
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0000 +0.0038 +0.0035 +0.0014 +0.0016 +0.0018
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0001 +0.0024 +0.0028 +0.0038 +0.0035
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0008 -0.0004 +0.0013
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0002 +0.0024 -0.0009 +0.0015 +0.0014 +0.0017
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0026 +0.0011 -0.0003 +0.0006 +0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0024 +0.0073 +0.0080 +0.0082 +0.0068 +0.0084
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0008 +0.0036 +0.0025 +0.0033 +0.0023 +0.0057
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0001 +0.0023 +0.0033 +0.0039 +0.0039 +0.0031
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0022 +0.0026 +0.0009 +0.0020 +0.0022
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0004 +0.0028 +0.0009 +0.0010 +0.0021 +0.0026
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0007 +0.0029 +0.0053 +0.0045 +0.0040 +0.0047
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0014 +0.0025 +0.0005 +0.0024 +0.0016 +0.0020
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0022 +0.0061 +0.0063 +0.0041 +0.0052 +0.0067
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0002 +0.0015 +0.0034 +0.0005 +0.0002 +0.0030
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 -0.0017 +0.0043 +0.0065 +0.0030 -0.0017 -0.0017
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0104 +0.0204 +0.0172 +0.0159 +0.0151 +0.0152
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0029 +0.0069 +0.0064 +0.0036 +0.0057 +0.0051
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0004 +0.0015 -0.0004 +0.0039 +0.0041 +0.0064
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0035 +0.0067 -0.0031 +0.0007 +0.0032 +0.0033
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 -0.0012 +0.0008 +0.0010 -0.0021 +0.0016 +0.0006
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0010 +0.0034 +0.0028 +0.0033 +0.0039 +0.0051
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0023 +0.0097 +0.0092
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 3631 -20764 -20957

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 402 -369 -360

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.1107 +0.0791 +0.0797

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 776 -68 +1405

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -49 -239 -105

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1791 +0.0332 +0.0370 +0.0390 +0.0417 +0.0416
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1714 +0.0321 +0.0351 +0.0362 +0.0390 +0.0389
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1784 +0.0328 +0.0360 +0.0376 +0.0375
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1664 +0.0134 +0.0255 +0.0289 +0.0309 +0.0310
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1820 +0.0123 +0.0181 +0.0205 +0.0221 +0.0223
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1605 +0.0102 +0.0239 +0.0268 +0.0282 +0.0281
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1571 +0.0091 +0.0072 +0.0076 +0.0066 +0.0065
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5980 +0.0111 +0.0111
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2117 +0.0401 +0.0400

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0883 +0.0120 +0.0144 +0.0156 +0.0163 +0.0125
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0853 +0.0130 +0.0150 +0.0153 +0.0165 +0.0135
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0786 +0.0113 +0.0126 +0.0128 +0.0099
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0690 -0.0088 +0.0087 +0.0097 +0.0102 +0.0089
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0815 +0.0023 +0.0059 +0.0062 +0.0043 +0.0041
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0675 -0.0095 +0.0108 +0.0106 +0.0107 +0.0092
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1019 -0.0009 -0.0000 -0.0017 -0.0008 -0.0014
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5795 -0.0087 -0.0085
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1366 +0.0133 +0.0119

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0134 -0.0020 +0.0070 +0.0012 +0.0000 -0.0643
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0035 -0.0076 +0.0055 -0.0002 -0.0001 -0.0373
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0003 +0.0007 -0.0023 -0.0001 -0.0000 -0.0006
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0629 +0.0012 -0.0008 +0.0020 -0.0002 -0.0638
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0622 -0.0054 -0.0006 -0.0003 +0.0001 -0.0101
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0557 -0.0080 +0.0050 -0.0016 -0.0001 +0.0268
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1342 -0.0059 -0.0059 +0.0211 -0.0012 -0.1011
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0789 +0.0062 +0.0047 -0.0191 -0.0001 +0.0186
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1978 +0.0183 -0.0240 +0.0287 +0.0020 -0.0827
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1048 +0.0048 -0.0054 -0.0067 +0.0002 +0.0164
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0470 +0.0009 +0.0001 -0.0089 -0.0000 +0.0014
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2094 +0.0051 -0.0017 +0.0004 +0.0004 +0.0055
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1332 -0.0032 -0.0062 -0.0160 +0.0006 +0.1101
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0816 +0.0043 -0.0045 -0.0054 -0.0001 -0.0203
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0454 +0.0169 -0.0238 +0.0355 +0 -0.0511
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0186 +0.0009 +0.0076 -0.0005 +0.0006 -0.0553
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0025 -0.0089 +0.0045 +0.0004 +0.0011 -0.0397
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0074 +0.0054 -0.0044 +0.0010 +0.0033 +0.0005
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0622 +0.0013 +0.0005 -0.0055 +0.0004 -0.0589
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0630 -0.0060 -0.0005 -0.0005 -0.0005 -0.0066
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0533 -0.0084 +0.0078 -0.0007 +0.0020 +0.0203
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1649 -0.0077 -0.0028 +0.0144 -0.0004 -0.0558
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0745 +0.0048 +0.0016 -0.0170 -0.0057 +0.0245
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2589 +0.0504 -0.0481 +0.0073 +0.0089 -0.0154
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1036 +0.0031 -0.0032 -0.0081 +0.0006 +0.0271
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0440 +0.0011 -0.0008 -0.0084 -0.0000 +0.0019
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2204 +0.0036 -0.0008 +0.0016 +0.0018 +0.0154
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1099 +0.0005 -0.0096 -0.0297 +0.0070 +0.0983
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0856 +0.0056 -0.0034 -0.0033 +0.0038 -0.0267
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0513 +0.0405 -0.0089 +0.0322 +0.0276 -0.0936
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1629 +0.0343 +0.0202 -0.0086 +0.0005 -0.1455
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1381 +0.0169 -0.0058 +0.0004 +0.0004 -0.0722
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1530 +0.0117 -0.0078 +0.0011 -0.0001 -0.1078
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1613 +0.0441 -0.0007 -0.0136 +0.0007 -0.1374
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1460 +0.0164 -0.0031 -0.0002 +0.0007 -0.0740
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1521 +0.0170 -0.0063 +0.0017 +0.0006 -0.1166
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2238 +0.0445 +0.0761 -0.1281 +0.0017 -0.3487
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0470 -0.0103 +0.0134 -0.0147 -0.0018 -0.1024
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3754 -0.0030 +0.1483 +0.0078 -0.0120 -0.5700
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1868 +0.0037 +0.0045 +0.0051 +0.0002 -0.1639
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0459 +0.0676 -0.0087 -0.0168 +0.0006 -0.1064
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1896 +0.0316 +0.0062 -0.0049 +0.0001 -0.1458
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2429 -0.0093 +0.0378 -0.0706 +0.0033 -0.3371
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0767 +0.0977 -0.0155 +0.0159 +0.0001 -0.1713
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5813 +0.0737 +0.1982 -0.0827 -0.0008 -0.6930
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0655 +0.0149 -0.0182 -0.0054 +0.1015 -0.1568
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0406 +0.0035 +0.0005 +0.0043 +0.0189 -0.0598
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0542 -0.0157 -0.0104 +0.0083 +0.0352 -0.0932
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0659 -0.0042 +0.0002 -0.0084 +0.0711 -0.1248
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0443 +0.0032 -0.0030 +0.0035 +0.0313 -0.0586
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0662 +0.0000 +0.0073 -0.0081 +0.0305 -0.0897
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0463 +0.0146 +0.0452 -0.0355 +0.0761 -0.2574
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0190 -0.0057 -0.0062 -0.0031 +0.0154 -0.0449
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0628 -0.1294 +0.1626 +0.0090 +0.0813 -0.5190
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0320 -0.0046 +0.0074 +0.0016 +0.0039 -0.0409
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0100 +0.0109 -0.0066 +0.0090 -0.0065 -0.0269
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0371 -0.0053 +0.0093 +0.0025 +0.0083 -0.0536
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0724 -0.0166 +0.0170 -0.0166 +0.0315 -0.1766
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0216 +0.0068 -0.0006 -0.0039 +0.0560 -0.1082
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1359 -0.0891 -0.0032 -0.0082 +0.0618 -0.3563
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 28.2500 +4.1800 +10.9300 +8.3800 +11.1200 +9.2200 +17.3660% +63.1062% +42.1741% +64.9154% +48.4498%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 12.3000 -0.4500 +3.2300 +3.9400 +3.0100 +4.1700 -3.5294% +35.6119% +47.1292% +32.4004% +51.2915%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 15.2100 +2.9000 +6.2500 +5.5500 +4.4000 +5.4200 +23.5581% +69.7545% +57.4534% +40.7031% +55.3626%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.9200 +1.6900 +1.5100 +0.9800 +1.6400 +39.9527% +34.2404% +19.8381% +38.3178%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 6 +0.6200 +1.6200 +1.2500 +1.4600 +1.4400 +11.5242% +36.9863% +26.3158% +32.1586% +31.5789%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.8500 +0.4200 +1.7100 +1.4100 +1.1900 +1.6100 +7.7348% +41.3043% +31.7568% +25.5365% +37.9717%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 6.1500 +0.6000 +1.7300 +1.6200 +1.6900 +1.6100 +10.8108% +39.1403% +35.7616% +37.8924% +35.4626%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 20.9500 -6.7100 +1.1900 +2.6300 +1.6700 +3.0500 -24.2589% +6.0223% +14.3559% +8.6618% +17.0391%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.2400 -0.5500 +0.6500 +0.5900 +1.1500 +0.8800 -9.4991% +14.1612% +12.6882% +28.1174% +20.1835%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.9800 -0.2800 +1.5800 +0.1000 +0.9700 -4.4728% +35.9091% +1.7007% +19.3613%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.8700 +1.3500 +2.1400 +1.0700 +2.2300 +2.0400 +29.8673% +57.3727% +22.2917% +61.2637% +53.2637%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.8800 -0.8600 +1.3700 +0.9600 +1.4400 +1.1600 -14.9826% +39.0313% +24.4898% +41.8605% +31.1828%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 8.7800 +1.7100 +3.2500 +3.2700 +3.0400 +3.3100 +24.1867% +58.7703% +59.3466% +52.9617% +60.5119%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 7.5900 +0 +1.8600 +1.4500 +2.0500 +1.7000 +0% +32.4607% +23.6156% +37.0036% +28.8625%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 6.1100 -0.3400 +1.4400 +1.8100 +1.7000 +1.6900 -5.2713% +30.8351% +42.0930% +38.5488% +38.2353%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 7.1900 -0.1900 +2.2600 +2.5600 +1.5700 +2.2300 -2.5745% +45.8418% +55.2916% +27.9359% +44.9597%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 6.0600 +1.3200 +2.4000 +2.6700 +2.4700 +27.8481% +65.5738% +78.7611% +68.8022%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 5.2300 -0.0300 +1.3900 +1.4700 +1.1700 -0.5703% +36.1979% +39.0957% +28.8177%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.9700 +0.3200 +1.5400 +1.2600 +1.5200 +1.4200 +6.8817% +44.8980% +33.9623% +44.0580% +40%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 5.4000 +1.2300 +2.1100 +1.7100 +2.1300 +1.8800 +29.4964% +64.1337% +46.3415% +65.1376% +53.4091%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 6.1200 +0.8400 +2.5900 +2.5200 +2.6300 +2.4200 +15.9091% +73.3711% +70% +75.3582% +65.4054%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 5.4500 -0.0600 +1.6300 +1.3000 +0.6400 +1.4200 -1.0889% +42.6702% +31.3253% +13.3056% +35.2357%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 5.3500 +0.6200 +1.8900 +1.7800 +1.5800 +13.1078% +54.6243% +49.8599% +41.9098%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.1500 +0.5000 +1.5300 +1.4200 +1.3700 +1.6500 +10.7527% +42.2652% +38.0697% +36.2434% +47.1429%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 8.9000 -0.1400 +2.3500 +2.8000 +1.6900 -1.5487% +35.8779% +45.9016% +23.4397%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 6.0500 +1.5800 +1.9100 +0.4700 +0.8300 +35.3468% +46.1353% +8.4229% +15.9004%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 28.9300 +2.7500 +4.6500 +10.5042% +19.1516%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 17.5200 +4.6100 +5.1000 +35.7088% +41.0628%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 20.3200 +8.2600 +5.9100 +68.4909% +41.0132%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 57.8400 +30.3300 +29.5600 +110.2508% +104.5262%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 48.8000 +21.1300 +20.3000 +76.3643% +71.2281%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png