Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1353310 +256816 +46305 +41355 +59769 +59769 +23.4216% +3.5428% +3.1522% +4.6206% +4.6206%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 658240 +71918 +42478 +47530 +58359 +58359 +12.2660% +6.8984% +7.7827% +9.7284% +9.7284%
MTAC_3P_Standard 596590 623022 617574 607435 607435 664183 +67593 +41161 +46609 +56748 +56748 +11.3299% +6.6067% +7.5471% +9.3422% +9.3422%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 155248 +17700 +18409 +19688 +19688 +12.8682% +13.4530% +14.5235% +14.5235%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 175241 +19600 +18690 +18732 +20206 +20397 +12.5931% +11.9386% +11.9686% +13.0332% +13.1726%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 156485 +17976 +17100 +17193 +18600 +18698 +12.9782% +12.2682% +12.3431% +13.4895% +13.5702%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 176748 +17786 +18016 +17588 +18826 +18826 +11.1888% +11.3499% +11.0505% +11.9211% +11.9211%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1334343 +311607 +179674 +210470 +150259 +150259 +30.4680% +15.5606% +18.7272% +12.6899% +12.6899%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 55633 +14751 +13933 +13208 +13533 +13533 +36.0819% +33.4125% +31.1326% +32.1449% +32.1449%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 53618 +12549 +11216 +11595 +12466 +12466 +30.5559% +26.4516% +27.5920% +30.2926% +30.2926%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 44425 +35685 +21310 +21410 +21512 +21512 +408.2952% +92.1912% +93.0263% +93.8856% +93.8856%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31094 +14159 +13541 +12685 +12746 +12746 +83.6079% +77.1435% +68.9065% +69.4681% +69.4681%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 121215 +21307 +18324 +22232 +22567 +22567 +21.3266% +17.8091% +22.4604% +22.8763% +22.8763%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 88869 +17771 +16141 +17424 +17743 +17743 +24.9951% +22.1937% +24.3880% +24.9459% +24.9459%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 130469 +24765 +23972 +24847 +26035 +25957 +23.4286% +22.5096% +23.5245% +24.9296% +24.8364%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 137092 +21935 +19776 +22770 +24011 +23842 +19.0479% +16.8570% +19.9174% +21.2335% +21.0525%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 20323 +10129 +9517 +9085 +9090 +9090 +99.3624% +88.0714% +80.8418% +80.9223% +80.9223%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 21286 +6479 +5853 +5245 +5587 +5587 +43.7563% +37.9252% +32.6975% +35.5883% +35.5883%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 8975 +7714 +6943 +6525 +6589 +6589 +611.7367% +341.6831% +266.3265% +276.1526% +276.1526%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 16201 +14765 +11418 +10511 +10470 +10470 +1028.2033% +238.7205% +184.7276% +182.6906% +182.6906%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 33331 +11621 +11436 +10751 +10868 +10868 +53.5283% +52.2311% +47.6129% +48.3818% +48.3818%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 33456 +7596 +7313 +7196 +7831 +7831 +29.3735% +27.9731% +27.4029% +30.5600% +30.5600%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20560 +17076 +13662 +13726 +13726 +490.1263% +198.0574% +200.8487% +200.8487%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 29718 +19019 +18244 +16836 +16829 +16829 +177.7643% +159.0030% +130.6940% +130.5687% +130.5687%
SCP_Astral_MBR 92167 93585 91884 90864 90838 111713 +19546 +18128 +19829 +20849 +20875 +21.2072% +19.3706% +21.5805% +22.9453% +22.9805%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61742 +5043 +5949 +5851 +5851 +8.8943% +10.6626% +10.4686% +10.4686%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1934127 +157999 +158781 +8.8957% +8.9437%
EWZ_2P_MBR_Exploris_Human 836809 836809 909086 +72277 +72277 +8.6372% +8.6372%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1016997 +102073 +103048 +11.1564% +11.2750%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2315003 +236969 +236967 +11.4035% +11.4034%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2315003 +236969 +236967 +11.4035% +11.4034%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 152071 +40567 +18452 +20712 +20040 +20040 +36.3817% +13.8094% +15.7675% +15.1783% +15.1783%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 127661 +19394 +10309 +13002 +12845 +12845 +17.9131% +8.7847% +11.3397% +11.1875% +11.1875%
MTAC_3P_Standard 110265 118693 115800 116148 116148 129826 +19561 +11133 +14026 +13678 +13678 +17.7400% +9.3797% +12.1123% +11.7764% +11.7764%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 58646 +9788 +9614 +9651 +9651 +20.0336% +19.6076% +19.6979% +19.6979%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 65269 +11300 +10194 +9429 +9385 +9448 +20.9379% +18.5093% +16.8857% +16.7937% +16.9255%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 59361 +10740 +9696 +9072 +8901 +8946 +22.0892% +19.5228% +18.0397% +17.6397% +17.7447%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 65628 +10568 +9709 +8921 +8801 +8801 +19.1936% +17.3626% +15.7317% +15.4874% +15.4874%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 74220 +22948 +15436 +19173 +15627 +15655 +44.7574% +26.2588% +34.8302% +26.6704% +26.7310%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21620 +7180 +6662 +6371 +5913 +5913 +49.7230% +44.5380% +41.7798% +37.6456% +37.6456%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20338 +5855 +5273 +5422 +5268 +5266 +40.4267% +35.0017% +36.3502% +34.9569% +34.9390%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18186 +9446 +8810 +8797 +8822 +8801 +108.0778% +93.9633% +93.6947% +94.2119% +93.7773%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17872 +8974 +8613 +8088 +8062 +8062 +100.8541% +93.0230% +82.6656% +82.1814% +82.1814%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 44012 +9147 +7715 +9670 +9587 +9587 +26.2355% +21.2552% +28.1579% +27.8489% +27.8489%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 32586 +7937 +7120 +7467 +7363 +7363 +32.2001% +27.9588% +29.7265% +29.1916% +29.1916%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 48433 +11745 +10757 +10784 +11012 +10974 +32.0132% +28.5513% +28.6435% +29.4273% +29.2960%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 49944 +9788 +8399 +9901 +10051 +9998 +24.3749% +20.2166% +24.7259% +25.1949% +25.0288%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8403 +4737 +4454 +4194 +4157 +4157 +129.2144% +112.7880% +99.6436% +97.9039% +97.9039%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8530 +3231 +2919 +2675 +2464 +2463 +60.9738% +52.0228% +45.6874% +40.6198% +40.5967%
SCP_Astral_250pg_3ms 675 721 908 879 879 4313 +3638 +3592 +3405 +3434 +3434 +538.9630% +498.1969% +375% +390.6712% +390.6712%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 6914 +5478 +5176 +4769 +4751 +4749 +381.4763% +297.8136% +222.3310% +219.6486% +219.3533%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13336 +5542 +5364 +5084 +4930 +4928 +71.1060% +67.2855% +61.6093% +58.6486% +58.6108%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 12845 +3687 +3503 +3474 +3431 +3430 +40.2599% +37.4973% +37.0718% +36.4457% +36.4312%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 9009 +7163 +6409 +6423 +6420 +388.0282% +246.5000% +248.3759% +247.9722%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12132 +8258 +7977 +7358 +7327 +7328 +213.1647% +191.9856% +154.1265% +152.4870% +152.5396%
SCP_Astral_MBR 24110 24991 24570 24544 24527 30923 +6813 +5932 +6353 +6379 +6396 +28.2580% +23.7365% +25.8567% +25.9901% +26.0774%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61742 +5043 +5949 +5851 +5851 +8.8943% +10.6626% +10.4686% +10.4686%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 63554 +8283 +8407 +14.9862% +15.2447%
EWZ_2P_MBR_Exploris_Human 48465 48473 55209 +6744 +6736 +13.9152% +13.8964%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 59466 +8220 +8289 +16.0403% +16.1967%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80661 +7383 +7384 +10.0753% +10.0768%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80661 +7383 +7384 +10.0753% +10.0768%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92279 +4359 -609 -1703 -1162 -2007 +4.9579% -0.6556% -1.8120% -1.2436% -2.1286%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67645 +3872 +3671 +4034 +4630 +1810 +6.0715% +5.7383% +6.3417% +7.3475% +2.7493%
MTAC_3P_Standard 64317 64464 64219 63385 65967 68248 +3931 +3784 +4029 +4863 +2281 +6.1119% +5.8699% +6.2738% +7.6722% +3.4578%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12997 +930 +1027 +1057 +758 +7.7070% +8.5798% +8.8526% +6.1933%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13332 +900 +861 +970 +1004 +672 +7.2394% +6.9040% +7.8466% +8.1441% +5.3081%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12811 +803 +764 +851 +843 +631 +6.6872% +6.3418% +7.1154% +7.0438% +5.1806%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13421 +860 +956 +944 +1011 +647 +6.8466% +7.6695% +7.5659% +8.1467% +5.0650%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 159356 +13132 +5822 +5366 +3529 +2070 +8.9807% +3.7920% +3.4846% +2.2647% +1.3161%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11932 +2769 +2404 +2347 +2598 +1910 +30.2194% +25.2309% +24.4862% +27.8337% +19.0581%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 11624 +2326 +1863 +2212 +2071 +1635 +25.0161% +19.0862% +23.5019% +21.6791% +16.3680%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 9913 +7463 +3829 +3666 +3797 +3564 +304.6122% +62.9356% +58.6842% +62.0831% +56.1348%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 6786 +2083 +2198 +1828 +1863 +1837 +44.2909% +47.9076% +36.8697% +37.8428% +37.1186%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17937 +1747 +1657 +1912 +1882 +1401 +10.7906% +10.1781% +11.9314% +11.7222% +8.4724%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15425 +1826 +1584 +1737 +1754 +1441 +13.4275% +11.4443% +12.6899% +12.8301% +10.3046%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18385 +2133 +2109 +2268 +2460 +1927 +13.1245% +12.9577% +14.0721% +15.4474% +11.7086%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 18925 +1908 +1747 +2012 +2180 +1576 +11.2123% +10.1700% +11.8962% +13.0188% +9.0841%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 5569 +1922 +1656 +1705 +2030 +1755 +52.7009% +42.3205% +44.1253% +57.3608% +46.0147%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6093 +1793 +1490 +1296 +1116 +924 +41.6977% +32.3702% +27.0169% +22.4231% +17.8758%
SCP_Astral_250pg_3ms 576 22 936 741 736 2882 +2306 +2860 +1946 +2141 +2146 +400.3472% +13000% +207.9060% +288.9339% +291.5761%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4650 +4013 +2570 +2621 +2604 +2582 +629.9843% +123.5577% +129.1769% +127.2727% +124.8549%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8230 +1985 +1884 +2214 +2103 +2011 +31.7854% +29.6880% +36.8019% +34.3235% +32.3364%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8377 +1655 +1648 +1365 +1354 +1035 +24.6206% +24.4910% +19.4666% +19.2795% +14.0970%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5776 +4794 +3411 +3599 +3540 +488.1874% +144.2283% +165.3192% +158.3184%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7702 +3994 +3695 +3657 +3784 +3599 +107.7131% +92.2136% +90.4079% +96.5799% +87.7163%
SCP_Astral_MBR 20165 20129 20074 19793 19898 21127 +962 +998 +1053 +1334 +1229 +4.7706% +4.9580% +5.2456% +6.7398% +6.1765%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5075 +390 +375 +443 +336 +8.3244% +7.9787% +9.5639% +7.0901%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 253662 +8403 +6240 +3.4262% +2.5220%
EWZ_2P_MBR_Exploris_Human 115447 117345 117407 +1960 +62 +1.6977% +0.0528%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 135483 +6515 +4777 +5.0516% +3.6548%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 192201 +14027 +8658 +7.8726% +4.7172%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 192201 +14027 +8658 +7.8726% +4.7172%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8537 +692 +362 +382 +334 +288 +8.8209% +4.4281% +4.6842% +4.0717% +3.4913%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12311 +950 +817 +960 +973 +513 +8.3619% +7.1081% +8.4574% +8.5818% +4.3482%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12445 +972 +885 +968 +1049 +613 +8.4721% +7.6557% +8.4343% +9.2050% +5.1809%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4517 +389 +425 +417 +334 +9.4234% +10.3861% +10.1707% +7.9847%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4588 +373 +340 +370 +374 +251 +8.8493% +8.0038% +8.7719% +8.8752% +5.7874%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4415 +340 +281 +325 +318 +230 +8.3436% +6.7973% +7.9462% +7.7618% +5.4958%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4612 +363 +375 +368 +381 +258 +8.5432% +8.8506% +8.6711% +9.0050% +5.9256%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8151 +896 +569 +811 +672 +614 +12.3501% +7.5046% +11.0490% +8.9852% +8.1465%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4321 +1076 +932 +910 +1003 +760 +33.1587% +27.5007% +26.6784% +30.2291% +21.3423%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4196 +942 +763 +905 +762 +704 +28.9490% +22.2255% +27.4992% +22.1899% +20.1604%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3731 +1281 +1335 +1281 +1334 +1297 +52.2857% +55.7179% +52.2857% +55.6529% +53.2868%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3655 +1147 +1219 +1021 +1013 +1072 +45.7337% +50.0411% +38.7623% +38.3422% +41.5021%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6282 +703 +626 +778 +736 +628 +12.6008% +11.0679% +14.1352% +13.2708% +11.1072%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5429 +708 +591 +646 +618 +585 +14.9968% +12.2158% +13.5062% +12.8456% +12.0768%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6495 +884 +840 +899 +942 +782 +15.7548% +14.8541% +16.0650% +16.9638% +13.6881%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6618 +772 +669 +775 +813 +653 +13.2056% +11.2456% +13.2637% +14.0052% +10.9472%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2110 +818 +686 +704 +822 +751 +63.3127% +48.1742% +50.0711% +63.8199% +55.2612%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2259 +691 +599 +501 +386 +389 +44.0689% +36.0843% +28.4983% +20.6086% +20.8021%
SCP_Astral_250pg_3ms 307 8 350 283 281 1233 +926 +1225 +883 +950 +952 +301.6287% +15312.5000% +252.2857% +335.6890% +338.7900%
SCP_Astral_250pg_6ms 637 756 751 766 767 1762 +1125 +1006 +1011 +996 +995 +176.6091% +133.0688% +134.6205% +130.0261% +129.7262%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3025 +818 +750 +856 +795 +808 +37.0639% +32.9670% +39.4652% +35.6502% +36.4456%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3089 +686 +701 +612 +550 +491 +28.5476% +29.3551% +24.7073% +21.6621% +18.8992%
SCP_Astral_500pg_3ms 525 902 828 835 2301 +1776 +1399 +1473 +1466 +338.2857% +155.0998% +177.8986% +175.5689%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2881 +1563 +1434 +1395 +1446 +1413 +118.5888% +99.1016% +93.8762% +100.7666% +96.2534%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5170 +462 +450 +458 +455 +454 +9.8131% +9.5339% +9.7199% +9.6501% +9.6268%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5075 +390 +375 +443 +336 +8.3244% +7.9787% +9.5639% +7.0901%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7480 +439 +374 +6.2349% +5.2632%
EWZ_2P_MBR_Exploris_Human 6167 6284 6364 +197 +80 +3.1944% +1.2731%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7477 +590 +514 +8.5669% +7.3819%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6344 +540 +389 +9.3039% +6.5323%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6344 +540 +389 +9.3039% +6.5323%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92258 -2021
MTAC_3P_Alternating 65832 67645 +1813
MTAC_3P_Standard 65967 68241 +2274
MTAC_Yeast_Alternating_3min 12239 12989 +750
MTAC_Yeast_Alternating_5min 12660 13325 +665
MTAC_Yeast_Standard_3min 12180 12809 +629
MTAC_Yeast_Standard_5min 12772 13413 +641
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 159351 +2066
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11920 +1898
SCP_Astral_1000pg_24ms 9989 11623 +1634
SCP_Astral_1000pg_3ms 6349 9913 +3564
SCP_Astral_1000pg_6ms 4949 6780 +1831
SCP_Astral_10ng_12ms 16536 17936 +1400
SCP_Astral_10ng_24ms 13982 15425 +1443
SCP_Astral_10ng_3ms 16458 18370 +1912
SCP_Astral_10ng_6ms 17349 18919 +1570
SCP_Astral_250pg_12ms 3814 5567 +1753
SCP_Astral_250pg_24ms 5169 6093 +924
SCP_Astral_250pg_3ms 736 2882 +2146
SCP_Astral_250pg_6ms 2066 4650 +2584
SCP_Astral_500pg_12ms 6219 8230 +2011
SCP_Astral_500pg_24ms 7342 8377 +1035
SCP_Astral_500pg_3ms 2234 5770 +3536
SCP_Astral_500pg_6ms 4103 7700 +3597
SCP_Astral_MBR 19891 21127 +1236
Seer_Astral_45 242898
Seer_Astral_single 4739 5075 +336
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 253648 +6226
EWZ_2P_MBR_Exploris_Human 117340 117398 +58
EWZ_2P_MBR_Exploris_YeastHuman 130702 135473 +4771
MacCoss_Eclipse_Normalization_noNorm 183540 192199 +8659
MacCoss_Eclipse_Normalization_yesNorm 183540 192199 +8659

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0007 +0.0004 +0.0004
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0006 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0006 -0.0001 -0.0005 +0.0004 +0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 0.0002 +0.0015 -0.0003 +0.0007 +0.0009 +0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0006 +0.0009 +0.0013 +0.0020 +0.0020
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0002 +0.0002 +0.0011 +0.0012 +0.0013 +0.0013
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0002 +0.0017 +0.0012 +0.0011 +0.0019 +0.0019
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0002 +0.0013 +0.0022 +0.0026 +0.0027
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0003 -0.0008 -0.0008
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0005 +0.0007 +0.0002 +0.0016 +0.0000 +0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0002 +0.0021 +0.0028 +0.0018
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0013 +0.0067 +0.0046 +0.0045 +0.0059 +0.0059
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 -0.0000 +0.0030 +0.0048 +0.0030 +0.0038 +0.0046
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0008 +0.0011 +0.0019 +0.0044 +0.0034 +0.0034
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0001 +0.0023 +0.0017 +0.0025 +0.0025
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0013 +0.0034 +0.0004 +0.0028 +0.0026 +0.0026
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0003 +0.0028 +0.0030 +0.0022 +0.0021 +0.0021
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0013 +0.0020 +0.0012 +0.0034 +0.0024 +0.0024
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0021 +0.0059 +0.0061 +0.0018 +0.0073 +0.0073
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0040 +0.0042 +0.0052 +0.0064 +0.0071 +0.0071
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0045 +0.0114 +0.0045 +0.0045
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0026 +0.0077 +0.0052 +0.0075 +0.0070
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0015 +0.0037 +0.0025 +0.0043 +0.0041 +0.0041
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0011 +0.0024 +0.0035 +0.0023 +0.0022 +0.0022
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0039 +0.0052 +0.0062 +0.0074 +0.0074
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0035 +0.0066 +0.0068 +0.0050 +0.0050
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0008 +0.0034 +0.0027 +0.0022 +0.0030 +0.0030
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0006 +0.0028 +0.0028
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 0.0001 +0.0027 +0.0029
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0028 +0.0002 -0.0014
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0017 -0.0007 -0.0006 -0.0023 -0.0024 -0.0006
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 0.0004 +0.0017 +0.0029 +0.0033 +0.0030 +0.0047
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 0.0014 +0.0079 +0.0066 +0.0062 +0.0058
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0011 +0.0053 +0.0050 +0.0060 +0.0045 +0.0068
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0032 +0.0026 +0.0015 -0.0013 -0.0005 -0.0008
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0018 +0.0054 +0.0063 +0.0074 +0.0072
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0030 -0.0027 +0.0001
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0013 +0.0016 -0.0011 +0.0016 -0.0004 +0.0004
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0021 +0.0028 +0.0021 +0.0022 +0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0022 +0.0048 +0.0036 +0.0048 +0.0048 +0.0061
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0018 +0.0041 +0.0041 +0.0054 +0.0053 +0.0068
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0012 +0.0030 +0.0061 +0.0055 +0.0057 +0.0058
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0020 +0.0034 +0.0019 +0.0033 +0.0040
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0013 +0.0019 +0.0010 +0.0003 +0.0032 +0.0023
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0005 +0.0042 +0.0078 +0.0071 +0.0066 +0.0065
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 0.0008 +0.0062 +0.0028 +0.0062 +0.0054 +0.0057
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0011 +0.0064 +0.0087 +0.0045 +0.0074 +0.0072
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 0.0079 +0.0121 +0.0121 +0.0105 +0.0092 +0.0122
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 -0.0010 +0.0018 -0.0010 +0.0075 -0.0010 -0.0010
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0115 +0.0214 +0.0182 +0.0200 +0.0203 +0.0203
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0004 +0.0040 +0.0044 -0.0010 +0.0025 +0.0028
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 0.0004 +0.0024 +0.0005 +0.0055 +0.0065 +0.0064
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0069 +0.0111 -0.0001 +0.0049 +0.0071 +0.0072
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0004 +0.0049 +0.0049 +0.0012 +0.0060 +0.0047
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0021 +0.0080 +0.0050 +0.0046 +0.0071 +0.0077
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0012 +0.0086 +0.0085
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 0.0001 +0.0013 +0.0013
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0001 +0.0002 +0.0002
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0000 +0.0001 -0.0003 +0.0002 +0.0001 +0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0002 +0.0010 -0.0000 +0.0005 +0.0005 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0004 +0.0006 +0.0009 +0.0011 +0.0011
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0003 +0.0007 +0.0011 +0.0013 +0.0011 +0.0011
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0000 +0.0009 +0.0008 +0.0008 +0.0011 +0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0005 +0.0013 +0.0015 +0.0019 +0.0019
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0005 +0.0002 +0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0010 +0.0014 +0.0005 +0.0016 +0.0010 +0.0010
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 0.0005 +0.0020 +0.0035 +0.0024
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0009 +0.0055 +0.0037 +0.0040 +0.0046 +0.0046
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0008 +0.0028 +0.0037 +0.0034 +0.0034 +0.0042
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0016 +0.0014 +0.0022 +0.0044 +0.0040 +0.0040
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0002 +0.0019 +0.0012 +0.0018 +0.0018
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0011 +0.0025 +0.0007 +0.0023 +0.0019 +0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0005 +0.0025 +0.0026 +0.0021 +0.0020 +0.0020
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0006 +0.0011 +0.0004 +0.0018 +0.0015 +0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0023 +0.0053 +0.0050 +0.0025 +0.0054 +0.0054
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0024 +0.0031 +0.0032 +0.0038 +0.0038 +0.0038
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0044 +0.0103 +0.0044 +0.0044
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0026 +0.0063 +0.0047 +0.0056 +0.0056
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0015 +0.0034 +0.0019 +0.0035 +0.0029 +0.0029
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0015 +0.0031 +0.0032 +0.0033 +0.0031 +0.0031
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0047 +0.0029 +0.0051 +0.0063 +0.0063
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0033 +0.0059 +0.0052 +0.0043 +0.0043
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0014 +0.0031 +0.0029 +0.0022 +0.0027 +0.0027
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0006 +0.0028 +0.0028
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0008 +0.0019 +0.0021
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0015 +0.0002 -0.0009
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0006 -0.0005 -0.0004 -0.0009 -0.0008 -0.0000
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 0.0004 +0.0013 +0.0018 +0.0025 +0.0023 +0.0028
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0011 +0.0047 +0.0045 +0.0041 +0.0033
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0013 +0.0050 +0.0035 +0.0038 +0.0026 +0.0038
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0018 +0.0020 +0.0017 -0.0004 -0.0002 +0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0016 +0.0039 +0.0043 +0.0053 +0.0050
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0009 -0.0004 +0.0012
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0008 +0.0018 -0.0015 +0.0009 +0.0008 +0.0011
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0012 +0.0025 +0.0011 +0.0020 +0.0027
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0019 +0.0029 +0.0036 +0.0039 +0.0024 +0.0040
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0015 +0.0029 +0.0018 +0.0026 +0.0016 +0.0049
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0021 +0.0046 +0.0056 +0.0061 +0.0061 +0.0054
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0025 +0.0023 +0.0006 +0.0017 +0.0019
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 0.0004 +0.0036 +0.0017 +0.0018 +0.0029 +0.0034
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0002 +0.0023 +0.0048 +0.0039 +0.0034 +0.0041
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0002 +0.0037 +0.0017 +0.0036 +0.0028 +0.0032
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0008 +0.0047 +0.0049 +0.0027 +0.0038 +0.0053
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 0.0056 +0.0069 +0.0088 +0.0059 +0.0057 +0.0085
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0009 +0.0069 +0.0090 +0.0055 +0.0009 +0.0009
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0071 +0.0170 +0.0139 +0.0126 +0.0118 +0.0118
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0016 +0.0056 +0.0051 +0.0023 +0.0043 +0.0038
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0006 +0.0025 +0.0005 +0.0049 +0.0050 +0.0073
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 0.0060 +0.0092 -0.0007 +0.0031 +0.0056 +0.0057
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0000 +0.0020 +0.0022 -0.0009 +0.0028 +0.0018
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0025 +0.0049 +0.0043 +0.0047 +0.0053 +0.0066
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0020 +0.0094 +0.0089
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 8044 -16351 -16544

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 346 -425 -416

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0430 +0.0114 +0.0120

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 772 -72 +1401

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -26 -216 -82

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 12 +4 +0 +1 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1690 +0.0232 +0.0270 +0.0290 +0.0317 +0.0315
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1617 +0.0224 +0.0254 +0.0265 +0.0293 +0.0292
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1657 +0.0201 +0.0232 +0.0249 +0.0248
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1543 +0.0012 +0.0133 +0.0167 +0.0187 +0.0188
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1745 +0.0047 +0.0106 +0.0129 +0.0146 +0.0147
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1516 +0.0013 +0.0150 +0.0179 +0.0193 +0.0192
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1541 +0.0061 +0.0042 +0.0046 +0.0036 +0.0035
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5967 +0.0098 +0.0097
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2142 +0.0425 +0.0424

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0852 +0.0089 +0.0113 +0.0125 +0.0132 +0.0095
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0813 +0.0090 +0.0110 +0.0114 +0.0125 +0.0095
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0767 +0.0094 +0.0107 +0.0109 +0.0080
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0666 -0.0112 +0.0063 +0.0074 +0.0078 +0.0065
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0808 +0.0016 +0.0052 +0.0055 +0.0036 +0.0034
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0633 -0.0138 +0.0066 +0.0064 +0.0064 +0.0049
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1014 -0.0015 -0.0006 -0.0023 -0.0013 -0.0019
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5782 -0.0100 -0.0098
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1386 +0.0153 +0.0140

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0106 -0.0020 +0.0070 +0.0012 +0.0000 -0.0671
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0039 -0.0076 +0.0055 -0.0002 -0.0001 -0.0368
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0009 +0.0007 -0.0023 -0.0001 -0.0000 +0.0000
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0630 +0.0012 -0.0008 +0.0020 -0.0002 -0.0636
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0613 -0.0054 -0.0006 -0.0003 +0.0001 -0.0110
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0539 -0.0080 +0.0050 -0.0016 -0.0001 +0.0249
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1278 -0.0059 -0.0059 +0.0211 -0.0012 -0.1075
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0818 +0.0062 +0.0047 -0.0191 -0.0001 +0.0214
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1955 +0.0183 -0.0240 +0.0287 +0.0020 -0.0850
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1049 +0.0048 -0.0054 -0.0067 +0.0002 +0.0165
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0469 +0.0009 +0.0001 -0.0089 -0.0000 +0.0013
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2066 +0.0051 -0.0017 +0.0004 +0.0004 +0.0027
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1350 -0.0032 -0.0062 -0.0160 +0.0006 +0.1119
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0801 +0.0043 -0.0045 -0.0054 -0.0001 -0.0218
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0436 +0.0169 -0.0238 +0.0355 +0 -0.0528
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0162 +0.0009 +0.0076 -0.0005 +0.0006 -0.0577
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0018 -0.0089 +0.0045 +0.0004 +0.0011 -0.0404
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0085 +0.0054 -0.0044 +0.0010 +0.0033 +0.0016
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0631 +0.0013 +0.0005 -0.0055 +0.0004 -0.0579
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0613 -0.0060 -0.0005 -0.0005 -0.0005 -0.0083
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0495 -0.0084 +0.0078 -0.0007 +0.0020 +0.0164
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1545 -0.0077 -0.0028 +0.0144 -0.0004 -0.0662
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0774 +0.0048 +0.0016 -0.0170 -0.0057 +0.0274
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2395 +0.0504 -0.0481 +0.0073 +0.0089 -0.0348
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1049 +0.0031 -0.0032 -0.0081 +0.0006 +0.0284
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0441 +0.0011 -0.0008 -0.0084 -0.0000 +0.0021
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2182 +0.0036 -0.0008 +0.0016 +0.0018 +0.0132
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1135 +0.0005 -0.0096 -0.0297 +0.0070 +0.1019
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0763 +0.0056 -0.0034 -0.0033 +0.0038 -0.0359
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0579 +0.0405 -0.0089 +0.0322 +0.0276 -0.0870
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1392 +0.0343 +0.0202 -0.0086 +0.0005 -0.1692
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1240 +0.0169 -0.0058 +0.0004 +0.0004 -0.0863
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1309 +0.0117 -0.0078 +0.0011 -0.0001 -0.1298
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1444 +0.0441 -0.0007 -0.0136 +0.0007 -0.1542
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1350 +0.0164 -0.0031 -0.0002 +0.0007 -0.0850
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1356 +0.0170 -0.0063 +0.0017 +0.0006 -0.1330
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2145 +0.0445 +0.0761 -0.1281 +0.0017 -0.3581
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0455 -0.0103 +0.0134 -0.0147 -0.0018 -0.1039
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.2591 -0.0030 +0.1483 +0.0078 -0.0120 -0.6863
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1866 +0.0037 +0.0045 +0.0051 +0.0002 -0.1641
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0436 +0.0676 -0.0087 -0.0168 +0.0006 -0.1087
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1852 +0.0316 +0.0062 -0.0049 +0.0001 -0.1502
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2519 -0.0093 +0.0378 -0.0706 +0.0033 -0.3282
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0579 +0.0977 -0.0155 +0.0159 +0.0001 -0.1900
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5469 +0.0737 +0.1982 -0.0827 -0.0008 -0.7275
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0576 +0.0149 -0.0182 -0.0054 +0.1015 -0.1647
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0391 +0.0035 +0.0005 +0.0043 +0.0189 -0.0612
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0528 -0.0157 -0.0104 +0.0083 +0.0352 -0.0946
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0483 -0.0042 +0.0002 -0.0084 +0.0711 -0.1424
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0385 +0.0032 -0.0030 +0.0035 +0.0313 -0.0644
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0593 +0.0000 +0.0073 -0.0081 +0.0305 -0.0966
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0455 +0.0146 +0.0452 -0.0355 +0.0761 -0.2582
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0188 -0.0057 -0.0062 -0.0031 +0.0154 -0.0452
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.1506 -0.1294 +0.1626 +0.0090 +0.0813 -0.4312
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0323 -0.0046 +0.0074 +0.0016 +0.0039 -0.0407
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0101 +0.0109 -0.0066 +0.0090 -0.0065 -0.0268
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0363 -0.0053 +0.0093 +0.0025 +0.0083 -0.0544
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0654 -0.0166 +0.0170 -0.0166 +0.0315 -0.1836
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0227 +0.0068 -0.0006 -0.0039 +0.0560 -0.1071
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1208 -0.0891 -0.0032 -0.0082 +0.0618 -0.3715
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 22.0700 -2 +4.7500 +2.2000 +4.9400 +3.0400 -8.3091% +27.4249% +11.0720% +28.8383% +15.9748%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 11.0900 -1.6600 +2.0200 +2.7300 +1.8000 +2.9600 -13.0196% +22.2712% +32.6555% +19.3757% +36.4084%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 11.0400 -1.2700 +2.0800 +1.3800 +0.2300 +1.2500 -10.3168% +23.2143% +14.2857% +2.1277% +12.7681%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.0700 +0.8400 +0.6600 +0.1300 +0.7900 +19.8582% +14.9660% +2.6316% +18.4579%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.8900 -0.4900 +0.5100 +0.1400 +0.3500 +0.3300 -9.1078% +11.6438% +2.9474% +7.7093% +7.2368%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.1200 -0.3100 +0.9800 +0.6800 +0.4600 +0.8800 -5.7090% +23.6715% +15.3153% +9.8712% +20.7547%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.5700 +0.0200 +1.1500 +1.0400 +1.1100 +1.0300 +0.3604% +26.0181% +22.9581% +24.8879% +22.6872%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 17.2500 -10.4100 -2.5100 -1.0700 -2.0300 -0.6500 -37.6356% -12.7024% -5.8406% -10.5290% -3.6313%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 5.0700 -0.7200 +0.4800 +0.4200 +0.9800 +0.7100 -12.4352% +10.4575% +9.0323% +23.9609% +16.2844%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.2400 -1.0200 +0.8400 -0.6400 +0.2300 -16.2939% +19.0909% -10.8844% +4.5908%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 4.8700 +0.3500 +1.1400 +0.0700 +1.2300 +1.0400 +7.7434% +30.5630% +1.4583% +33.7912% +27.1540%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.4400 -1.3000 +0.9300 +0.5200 +1.0000 +0.7200 -22.6481% +26.4957% +13.2653% +29.0698% +19.3548%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.4700 -0.6000 +0.9400 +0.9600 +0.7300 +1 -8.4866% +16.9982% +17.4229% +12.7178% +18.2815%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.5200 -1.0700 +0.7900 +0.3800 +0.9800 +0.6300 -14.0975% +13.7871% +6.1889% +17.6895% +10.6961%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.5300 -0.9200 +0.8600 +1.2300 +1.1200 +1.1100 -14.2636% +18.4154% +28.6047% +25.3968% +25.1131%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.6400 -0.7400 +1.7100 +2.0100 +1.0200 +1.6800 -10.0271% +34.6856% +43.4125% +18.1495% +33.8710%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.5500 -0.1900 +0.8900 +1.1600 +0.9600 -4.0084% +24.3169% +34.2183% +26.7409%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.6300 -0.6300 +0.7900 +0.8700 +0.5700 -11.9772% +20.5729% +23.1383% +14.0394%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 4.0700 -0.5800 +0.6400 +0.3600 +0.6200 +0.5200 -12.4731% +18.6589% +9.7035% +17.9710% +14.6479%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 4.5900 +0.4200 +1.3000 +0.9000 +1.3200 +1.0700 +10.0719% +39.5137% +24.3902% +40.3670% +30.3977%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.5800 -0.7000 +1.0500 +0.9800 +1.0900 +0.8800 -13.2576% +29.7450% +27.2222% +31.2321% +23.7838%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.8100 -0.7000 +0.9900 +0.6600 +0 +0.7800 -12.7042% +25.9162% +15.9036% +0% +19.3548%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.4800 -0.2500 +1.0200 +0.9100 +0.7100 -5.2854% +29.4798% +25.4902% +18.8329%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.9900 +0.3400 +1.3700 +1.2600 +1.2100 +1.4900 +7.3118% +37.8453% +33.7802% +32.0106% +42.5714%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.6100 -1.4300 +1.0600 +1.5100 +0.4000 -15.8186% +16.1832% +24.7541% +5.5479%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.8900 +1.4200 +1.7500 +0.3100 +0.6700 +31.7673% +42.2705% +5.5556% +12.8352%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 24.1200 -2.0600 -0.1600 -7.8686% -0.6590%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 13.8300 +0.9200 +1.4100 +7.1263% +11.3527%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 15.0800 +3.0200 +0.6700 +25.0415% +4.6495%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 35.4100 +7.9000 +7.1300 +28.7168% +25.2122%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 38.3400 +10.6700 +9.8400 +38.5616% +34.5263%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png