Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1315089 +218595 +8084 +3134 +21548 +21548 +19.9358% +0.6185% +0.2389% +1.6658% +1.6658%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 640799 +54477 +25037 +30089 +40918 +40918 +9.2913% +4.0660% +4.9269% +6.8210% +6.8210%
MTAC_3P_Standard 596590 623022 617574 607435 607435 646465 +49875 +23443 +28891 +39030 +39030 +8.3600% +3.7628% +4.6781% +6.4254% +6.4254%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 149010 +11462 +12171 +13450 +13450 +8.3331% +8.8944% +9.9218% +9.9218%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 168575 +12934 +12024 +12066 +13540 +13731 +8.3101% +7.6806% +7.7095% +8.7335% +8.8676%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 151057 +12548 +11672 +11765 +13172 +13270 +9.0593% +8.3739% +8.4463% +9.5529% +9.6308%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 169495 +10533 +10763 +10335 +11573 +11573 +6.6261% +6.7806% +6.4935% +7.3283% +7.3283%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1299031 +276295 +144362 +175158 +114947 +114947 +27.0153% +12.5025% +15.5852% +9.7077% +9.7077%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 49237 +8355 +7537 +6812 +7137 +7137 +20.4369% +18.0743% +16.0566% +16.9525% +16.9525%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 48255 +7186 +5853 +6232 +7103 +7103 +17.4974% +13.8036% +14.8300% +17.2604% +17.2604%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 38130 +29390 +15015 +15115 +15217 +15217 +336.2700% +64.9578% +65.6746% +66.4121% +66.4121%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 26579 +9644 +9026 +8170 +8231 +8231 +56.9472% +51.4214% +44.3805% +44.8605% +44.8605%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 112313 +12405 +9422 +13330 +13665 +13665 +12.4164% +9.1573% +13.4670% +13.8523% +13.8523%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 80851 +9753 +8123 +9406 +9725 +9725 +13.7177% +11.1690% +13.1654% +13.6729% +13.6729%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 117231 +11527 +10734 +11609 +12797 +12719 +10.9050% +10.0792% +10.9911% +12.2537% +12.1699%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 124851 +9694 +7535 +10529 +11770 +11601 +8.4181% +6.4228% +9.2100% +10.4085% +10.2437%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 17130 +6936 +6324 +5892 +5897 +5897 +68.0400% +58.5230% +52.4293% +52.4971% +52.4971%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 18616 +3809 +3183 +2575 +2917 +2917 +25.7243% +20.6246% +16.0526% +18.5808% +18.5808%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386 7809 +6548 +5777 +5359 +5423 +5423 +519.2704% +284.3012% +218.7347% +227.2842% +227.2842%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731 13543 +12107 +8760 +7853 +7812 +7812 +843.1058% +183.1487% +138.0141% +136.3113% +136.3113%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 30029 +8319 +8134 +7449 +7566 +7566 +38.3187% +37.1500% +32.9894% +33.6821% +33.6821%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 28412 +2552 +2269 +2152 +2787 +2787 +9.8685% +8.6792% +8.1950% +10.8761% +10.8761%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 16873 +13389 +9975 +10039 +10039 +384.2997% +144.6071% +146.8979% +146.8979%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 24615 +13916 +13141 +11733 +11726 +11726 +130.0682% +114.5285% +91.0806% +90.9768% +90.9768%
SCP_Astral_MBR 92167 93585 91884 90864 90838 105340 +13173 +11755 +13456 +14476 +14502 +14.2925% +12.5608% +14.6446% +15.9315% +15.9647%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 56532 -167 +739 +641 +641 -0.2945% +1.3245% +1.1469% +1.1469%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1882112 +105984 +106766 +5.9671% +6.0138%
EWZ_2P_MBR_Exploris_Human 836809 836809 884763 +47954 +47954 +5.7306% +5.7306%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 981752 +66828 +67803 +7.3042% +7.4187%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2253087 +175053 +175051 +8.4240% +8.4239%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2253087 +175053 +175051 +8.4240% +8.4239%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 144538 +33034 +10919 +13179 +12507 +12507 +29.6258% +8.1717% +10.0328% +9.4728% +9.4728%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 122854 +14587 +5502 +8195 +8038 +8038 +13.4732% +4.6885% +7.1473% +7.0008% +7.0008%
MTAC_3P_Standard 110265 118693 115800 116148 116148 123914 +13649 +5221 +8114 +7766 +7766 +12.3784% +4.3987% +7.0069% +6.6863% +6.6863%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 55644 +6786 +6612 +6649 +6649 +13.8892% +13.4851% +13.5708% +13.5708%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 62065 +8096 +6990 +6225 +6181 +6244 +15.0012% +12.6918% +11.1479% +11.0604% +11.1858%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 56734 +8113 +7069 +6445 +6274 +6319 +16.6862% +14.2334% +12.8159% +12.4336% +12.5340%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 62252 +7192 +6333 +5545 +5425 +5425 +13.0621% +11.3253% +9.7783% +9.5465% +9.5465%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 68837 +17565 +10053 +13790 +10244 +10272 +34.2585% +17.1016% +25.0513% +17.4833% +17.5395%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 18457 +4017 +3499 +3208 +2750 +2750 +27.8186% +23.3922% +21.0374% +17.5081% +17.5081%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 17766 +3283 +2701 +2850 +2696 +2694 +22.6680% +17.9290% +19.1070% +17.8898% +17.8742%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 15189 +6449 +5813 +5800 +5825 +5804 +73.7872% +61.9987% +61.7744% +62.2063% +61.8434%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 14970 +6072 +5711 +5186 +5160 +5160 +68.2401% +61.6805% +53.0049% +52.5994% +52.5994%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 40264 +5399 +3967 +5922 +5839 +5839 +15.4854% +10.9293% +17.2442% +16.9615% +16.9615%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 29244 +4595 +3778 +4125 +4021 +4021 +18.6417% +14.8355% +16.4218% +15.9418% +15.9418%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 42513 +5825 +4837 +4864 +5092 +5054 +15.8771% +12.8384% +12.9193% +13.6073% +13.4921%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 44703 +4547 +3158 +4660 +4810 +4757 +11.3233% +7.6014% +11.6375% +12.0573% +11.9086%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 6850 +3184 +2901 +2641 +2604 +2604 +86.8522% +73.4616% +62.7465% +61.3283% +61.3283%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 7218 +1919 +1607 +1363 +1152 +1151 +36.2144% +28.6402% +23.2792% +18.9911% +18.9715%
SCP_Astral_250pg_3ms 675 721 908 879 879 3600 +2925 +2879 +2692 +2721 +2721 +433.3333% +399.3065% +296.4758% +309.5563% +309.5563%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165 5624 +4188 +3886 +3479 +3461 +3459 +291.6435% +223.5903% +162.1911% +160.0092% +159.7691%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 11795 +4001 +3823 +3543 +3389 +3387 +51.3344% +47.9553% +42.9350% +40.3164% +40.2831%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 10527 +1369 +1185 +1156 +1113 +1112 +14.9487% +12.6846% +12.3359% +11.8228% +11.8109%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 7204 +5358 +4604 +4618 +4615 +290.2492% +177.0769% +178.5770% +178.2542%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 9768 +5894 +5613 +4994 +4963 +4964 +152.1425% +135.0903% +104.6083% +103.2882% +103.3306%
SCP_Astral_MBR 24110 24991 24570 24544 24527 28439 +4329 +3448 +3869 +3895 +3912 +17.9552% +13.7970% +15.7468% +15.8695% +15.9498%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 56532 -167 +739 +641 +641 -0.2945% +1.3245% +1.1469% +1.1469%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 59431 +4160 +4284 +7.5266% +7.7683%
EWZ_2P_MBR_Exploris_Human 48465 48473 52075 +3610 +3602 +7.4487% +7.4309%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 55221 +3975 +4044 +7.7567% +7.9020%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 76680 +3402 +3403 +4.6426% +4.6440%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 76680 +3402 +3403 +4.6426% +4.6440%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 90951 +3031 -1937 -3031 -2490 -3335 +3.4475% -2.0853% -3.2251% -2.6648% -3.5371%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 67063 +3290 +3089 +3452 +4048 +1228 +5.1589% +4.8285% +5.4267% +6.4239% +1.8653%
MTAC_3P_Standard 64317 64464 64219 63385 65967 67758 +3441 +3294 +3539 +4373 +1791 +5.3501% +5.1098% +5.5108% +6.8991% +2.7150%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 12831 +764 +861 +891 +592 +6.3313% +7.1930% +7.4623% +4.8370%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13156 +724 +685 +794 +828 +496 +5.8237% +5.4927% +6.4229% +6.7164% +3.9179%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 12621 +613 +574 +661 +653 +441 +5.1049% +4.7647% +5.5268% +5.4562% +3.6207%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13266 +705 +801 +789 +856 +492 +5.6126% +6.4260% +6.3236% +6.8977% +3.8516%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 154619 +8395 +1085 +629 -1208 -2667 +5.7412% +0.7067% +0.4085% -0.7752% -1.6956%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 11057 +1894 +1529 +1472 +1723 +1035 +20.6701% +16.0474% +15.3573% +18.4594% +10.3273%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 10849 +1551 +1088 +1437 +1296 +860 +16.6810% +11.1464% +15.2677% +13.5664% +8.6095%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 8882 +6432 +2798 +2635 +2766 +2533 +262.5306% +45.9895% +42.1802% +45.2256% +39.8960%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 5986 +1283 +1398 +1028 +1063 +1037 +27.2805% +30.4708% +20.7342% +21.5925% +20.9537%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 17202 +1012 +922 +1177 +1147 +666 +6.2508% +5.6634% +7.3448% +7.1442% +4.0276%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 14365 +766 +524 +677 +694 +381 +5.6328% +3.7859% +4.9459% +5.0764% +2.7245%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 17325 +1073 +1049 +1208 +1400 +867 +6.6023% +6.4451% +7.4952% +8.7912% +5.2680%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 17863 +846 +685 +950 +1118 +514 +4.9715% +3.9877% +5.6170% +6.6766% +2.9627%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 4994 +1347 +1081 +1130 +1455 +1180 +36.9345% +27.6259% +29.2443% +41.1133% +30.9386%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 5461 +1161 +858 +664 +484 +292 +27% +18.6400% +13.8420% +9.7247% +5.6491%
SCP_Astral_250pg_3ms 576 22 936 741 736 2346 +1770 +2324 +1410 +1605 +1610 +307.2917% +10563.6364% +150.6410% +216.5992% +218.7500%
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068 4142 +3505 +2062 +2113 +2096 +2074 +550.2355% +99.1346% +104.1400% +102.4438% +100.2901%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 7453 +1208 +1107 +1437 +1326 +1234 +19.3435% +17.4441% +23.8863% +21.6419% +19.8424%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 7153 +431 +424 +141 +130 -189 +6.4118% +6.3011% +2.0108% +1.8511% -2.5742%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5031 +4049 +2666 +2854 +2795 +412.3218% +112.7273% +131.0978% +125%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 6747 +3039 +2740 +2702 +2829 +2644 +81.9579% +68.3803% +66.7985% +72.2052% +64.4407%
SCP_Astral_MBR 20165 20129 20074 19793 19898 20367 +202 +238 +293 +574 +469 +1.0017% +1.1824% +1.4596% +2.9000% +2.3570%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 4848 +163 +148 +216 +109 +3.4792% +3.1489% +4.6632% +2.3001%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 245692 +433 -1730 +0.1765% -0.6992%
EWZ_2P_MBR_Exploris_Human 115447 117345 114161 -1286 -3184 -1.1139% -2.7134%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 130795 +1827 +89 +1.4166% +0.0681%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 188768 +10594 +5225 +5.9459% +2.8467%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 188768 +10594 +5225 +5.9459% +2.8467%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8285 +440 +110 +130 +82 +36 +5.6087% +1.3456% +1.5941% +0.9996% +0.4364%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12135 +774 +641 +784 +797 +337 +6.8128% +5.5768% +6.9069% +7.0295% +2.8564%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12264 +791 +704 +787 +868 +432 +6.8944% +6.0900% +6.8572% +7.6167% +3.6511%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4434 +306 +342 +334 +251 +7.4128% +8.3578% +8.1463% +6.0005%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4507 +292 +259 +289 +293 +170 +6.9276% +6.0970% +6.8516% +6.9530% +3.9198%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4354 +279 +220 +264 +257 +169 +6.8466% +5.3217% +6.4548% +6.2729% +4.0382%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4535 +286 +298 +291 +304 +181 +6.7310% +7.0333% +6.8567% +7.1851% +4.1571%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 7660 +405 +78 +320 +181 +123 +5.5824% +1.0288% +4.3597% +2.4201% +1.6319%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 3965 +720 +576 +554 +647 +404 +22.1880% +16.9962% +16.2416% +19.4997% +11.3451%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 3854 +600 +421 +563 +420 +362 +18.4388% +12.2633% +17.1073% +12.2306% +10.3666%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3273 +823 +877 +823 +876 +839 +33.5918% +36.6027% +33.5918% +36.5457% +34.4700%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3160 +652 +724 +526 +518 +577 +25.9968% +29.7209% +19.9696% +19.6064% +22.3384%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 5957 +378 +301 +453 +411 +303 +6.7754% +5.3218% +8.2304% +7.4107% +5.3590%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5016 +295 +178 +233 +205 +172 +6.2487% +3.6792% +4.8714% +4.2611% +3.5508%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6035 +424 +380 +439 +482 +322 +7.5566% +6.7197% +7.8449% +8.6800% +5.6363%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6171 +325 +222 +328 +366 +206 +5.5594% +3.7317% +5.6136% +6.3049% +3.4535%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 1856 +564 +432 +450 +568 +497 +43.6533% +30.3371% +32.0057% +44.0994% +36.5710%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 1978 +410 +318 +220 +105 +108 +26.1480% +19.1566% +12.5142% +5.6060% +5.7754%
SCP_Astral_250pg_3ms 307 8 350 283 281 941 +634 +933 +591 +658 +660 +206.5147% +11662.5000% +168.8571% +232.5088% +234.8754%
SCP_Astral_250pg_6ms 637 756 751 766 767 1620 +983 +864 +869 +854 +853 +154.3171% +114.2857% +115.7124% +111.4883% +111.2125%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 2705 +498 +430 +536 +475 +488 +22.5646% +18.9011% +24.7118% +21.3004% +22.0117%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 2562 +159 +174 +85 +23 -36 +6.6167% +7.2864% +3.4316% +0.9059% -1.3857%
SCP_Astral_500pg_3ms 525 902 828 835 1950 +1425 +1048 +1122 +1115 +271.4286% +116.1863% +135.5072% +133.5329%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2471 +1153 +1024 +985 +1036 +1003 +87.4810% +70.7671% +66.2853% +72.1951% +68.3243%
SCP_Astral_MBR 4708 4720 4712 4715 4716 4878 +170 +158 +166 +163 +162 +3.6109% +3.3475% +3.5229% +3.4571% +3.4351%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 4848 +163 +148 +216 +109 +3.4792% +3.1489% +4.6632% +2.3001%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7050 +9 -56 +0.1278% -0.7881%
EWZ_2P_MBR_Exploris_Human 6167 6284 6081 -86 -203 -1.3945% -3.2304%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 6965 +78 +2 +1.1326% +0.0287%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6108 +304 +153 +5.2378% +2.5693%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6108 +304 +153 +5.2378% +2.5693%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 90946 -3333
MTAC_3P_Alternating 65832 67063 +1231
MTAC_3P_Standard 65967 67755 +1788
MTAC_Yeast_Alternating_3min 12239 12827 +588
MTAC_Yeast_Alternating_5min 12660 13153 +493
MTAC_Yeast_Standard_3min 12180 12621 +441
MTAC_Yeast_Standard_5min 12772 13266 +494
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 154616 -2669
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 11057 +1035
SCP_Astral_1000pg_24ms 9989 10849 +860
SCP_Astral_1000pg_3ms 6349 8882 +2533
SCP_Astral_1000pg_6ms 4949 5986 +1037
SCP_Astral_10ng_12ms 16536 17201 +665
SCP_Astral_10ng_24ms 13982 14365 +383
SCP_Astral_10ng_3ms 16458 17324 +866
SCP_Astral_10ng_6ms 17349 17863 +514
SCP_Astral_250pg_12ms 3814 4994 +1180
SCP_Astral_250pg_24ms 5169 5461 +292
SCP_Astral_250pg_3ms 736 2346 +1610
SCP_Astral_250pg_6ms 2066 4142 +2076
SCP_Astral_500pg_12ms 6219 7451 +1232
SCP_Astral_500pg_24ms 7342 7153 -189
SCP_Astral_500pg_3ms 2234 5031 +2797
SCP_Astral_500pg_6ms 4103 6747 +2644
SCP_Astral_MBR 19891 20367 +476
Seer_Astral_45 242898
Seer_Astral_single 4739 4848 +109
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 245690 -1732
EWZ_2P_MBR_Exploris_Human 117340 114155 -3185
EWZ_2P_MBR_Exploris_YeastHuman 130702 130793 +91
MacCoss_Eclipse_Normalization_noNorm 183540 188768 +5228
MacCoss_Eclipse_Normalization_yesNorm 183540 188768 +5228

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0010 +0.0001 +0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0007 -0.0000 -0.0000
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0012 -0.0007 -0.0011 -0.0002 -0.0004 -0.0004
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0013 +0.0001 -0.0017 -0.0007 -0.0006 -0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 -0.0013 +0.0002 +0.0006 +0.0013 +0.0013
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 -0.0000 +0.0004 +0.0012 +0.0014 +0.0015 +0.0015
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0003 +0.0016 +0.0011 +0.0009 +0.0017 +0.0017
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0002 +0.0013 +0.0022 +0.0026 +0.0027
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0002 -0.0008 -0.0008
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0009 +0.0010 +0.0006 +0.0020 +0.0004 +0.0004
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0008 +0.0015 +0.0022 +0.0012
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0019 +0.0073 +0.0052 +0.0050 +0.0065 +0.0065
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0029 +0.0058 +0.0076 +0.0058 +0.0067 +0.0075
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 -0.0002 +0.0000 +0.0009 +0.0033 +0.0024 +0.0024
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 -0.0007 +0.0015 +0.0009 +0.0017 +0.0017
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 -0.0007 +0.0013 -0.0016 +0.0008 +0.0006 +0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 -0.0004 +0.0020 +0.0022 +0.0014 +0.0013 +0.0013
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0001 +0.0009 +0.0000 +0.0022 +0.0013 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0034 +0.0073 +0.0075 +0.0031 +0.0086 +0.0086
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0019 -0.0017 -0.0008 +0.0005 +0.0012 +0.0012
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0028 +0.0097 +0.0028 +0.0028
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0027 +0.0077 +0.0053 +0.0076 +0.0071
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 -0.0022 -0.0000 -0.0012 +0.0006 +0.0004 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0013 +0.0026 +0.0037 +0.0025 +0.0024 +0.0024
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0016 +0.0028 +0.0038 +0.0050 +0.0050
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0020 +0.0051 +0.0052 +0.0034 +0.0034
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 -0.0009 +0.0017 +0.0010 +0.0005 +0.0013 +0.0013
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0003 +0.0019 +0.0019
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 -0.0004 +0.0022 +0.0023
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0033 -0.0003 -0.0019
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0032 -0.0022 -0.0021 -0.0037 -0.0039 -0.0021
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0024 -0.0012 +0.0001 +0.0005 +0.0001 +0.0019
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0026 +0.0040 +0.0027 +0.0022 +0.0018
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 0.0030 +0.0071 +0.0068 +0.0078 +0.0064 +0.0087
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0026 +0.0032 +0.0021 -0.0006 +0.0002 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0007 +0.0043 +0.0052 +0.0063 +0.0061
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0013 -0.0011 +0.0017
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0027 +0.0003 -0.0025 +0.0002 -0.0018 -0.0009
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0003 +0.0046 +0.0039 +0.0039 +0.0037
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 -0.0012 +0.0058 +0.0046 +0.0058 +0.0058 +0.0071
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 0.0003 +0.0063 +0.0062 +0.0075 +0.0075 +0.0090
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0007 +0.0011 +0.0042 +0.0036 +0.0038 +0.0039
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0004 +0.0051 +0.0036 +0.0050 +0.0057
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0035 -0.0003 -0.0012 -0.0019 +0.0010 +0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 -0.0023 +0.0014 +0.0050 +0.0043 +0.0038 +0.0037
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0029 +0.0025 -0.0009 +0.0025 +0.0017 +0.0019
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 -0.0060 -0.0007 +0.0016 -0.0026 +0.0004 +0.0001
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0068 -0.0026 -0.0026 -0.0042 -0.0055 -0.0026
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0085 +0.0113 +0.0085 +0.0171 +0.0085 +0.0085
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0139 +0.0238 +0.0206 +0.0223 +0.0227 +0.0227
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 -0.0021 +0.0014 +0.0018 -0.0036 -0.0001 +0.0003
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0009 +0.0011 -0.0008 +0.0042 +0.0053 +0.0051
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 0.0013 +0.0054 -0.0058 -0.0007 +0.0014 +0.0015
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0012 +0.0057 +0.0058 +0.0020 +0.0068 +0.0055
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 -0.0034 +0.0025 -0.0004 -0.0009 +0.0016 +0.0023
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0025 +0.0099 +0.0098
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0006 +0.0006 +0.0006
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 -0.0001 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 -0.0004 -0.0003 -0.0007 -0.0002 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 -0.0002 +0.0006 -0.0004 +0.0001 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0007 +0.0003 +0.0006 +0.0007 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0008 +0.0012 +0.0015 +0.0018 +0.0016 +0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0000 +0.0008 +0.0007 +0.0008 +0.0011 +0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0004 +0.0012 +0.0014 +0.0019 +0.0019
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0002 -0.0000 -0.0000
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0012 +0.0016 +0.0007 +0.0018 +0.0012 +0.0012
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0002 +0.0013 +0.0028 +0.0017
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0012 +0.0058 +0.0041 +0.0043 +0.0050 +0.0050
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0028 +0.0048 +0.0058 +0.0054 +0.0054 +0.0062
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0008 +0.0006 +0.0014 +0.0035 +0.0032 +0.0032
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0000 +0.0017 +0.0010 +0.0016 +0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0000 +0.0014 -0.0003 +0.0012 +0.0008 +0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0002 +0.0021 +0.0022 +0.0018 +0.0016 +0.0016
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0002 +0.0007 -0.0000 +0.0014 +0.0010 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0018 +0.0048 +0.0045 +0.0020 +0.0049 +0.0049
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0010 -0.0003 -0.0002 +0.0003 +0.0004 +0.0004
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0030 +0.0089 +0.0030 +0.0030
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0030 +0.0067 +0.0052 +0.0060 +0.0060
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 -0.0008 +0.0010 -0.0005 +0.0012 +0.0005 +0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0009 +0.0025 +0.0026 +0.0027 +0.0025 +0.0025
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0014 -0.0005 +0.0017 +0.0029 +0.0029
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0018 +0.0043 +0.0037 +0.0028 +0.0028
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0003 +0.0020 +0.0018 +0.0011 +0.0016 +0.0016
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 -0.0003 +0.0019 +0.0019
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 -0.0000 +0.0011 +0.0013
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0023 -0.0006 -0.0016
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0014 -0.0012 -0.0011 -0.0017 -0.0016 -0.0008
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0012 -0.0003 +0.0002 +0.0009 +0.0007 +0.0012
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0012 +0.0024 +0.0021 +0.0017 +0.0010
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0025 +0.0062 +0.0047 +0.0050 +0.0038 +0.0050
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 -0.0009 +0.0029 +0.0026 +0.0005 +0.0007 +0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0003 +0.0026 +0.0030 +0.0040 +0.0037
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0003 +0.0001 +0.0017
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0007 +0.0019 -0.0014 +0.0010 +0.0009 +0.0012
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0004 +0.0033 +0.0019 +0.0028 +0.0035
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 -0.0008 +0.0041 +0.0048 +0.0050 +0.0036 +0.0052
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 0.0008 +0.0052 +0.0041 +0.0048 +0.0039 +0.0072
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0019 +0.0006 +0.0016 +0.0021 +0.0021 +0.0014
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0014 +0.0033 +0.0016 +0.0027 +0.0030
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0028 +0.0003 -0.0015 -0.0014 -0.0003 +0.0002
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0022 -0.0001 +0.0024 +0.0015 +0.0010 +0.0017
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0023 +0.0015 -0.0004 +0.0015 +0.0006 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 -0.0029 +0.0010 +0.0012 -0.0010 +0.0001 +0.0015
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0037 -0.0024 -0.0005 -0.0034 -0.0036 -0.0009
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0036 +0.0096 +0.0118 +0.0083 +0.0036 +0.0036
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0074 +0.0174 +0.0142 +0.0129 +0.0121 +0.0121
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 -0.0008 +0.0032 +0.0027 -0.0001 +0.0019 +0.0014
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 0.0003 +0.0022 +0.0003 +0.0046 +0.0048 +0.0071
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 -0.0005 +0.0028 -0.0071 -0.0033 -0.0008 -0.0007
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0043 +0.0062 +0.0065 +0.0034 +0.0071 +0.0061
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 -0.0018 +0.0006 -0.0000 +0.0004 +0.0011 +0.0023
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0026 +0.0100 +0.0095
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 15597 -8798 -8991

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 209 -562 -553

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0134 -0.0182 -0.0176

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 736 -108 +1365

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -11 -201 -67

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 15 +3 +0 +1 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1667 +0.0208 +0.0246 +0.0267 +0.0293 +0.0292
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1598 +0.0205 +0.0236 +0.0247 +0.0274 +0.0273
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1618 +0.0163 +0.0194 +0.0211 +0.0209
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1521 -0.0010 +0.0112 +0.0145 +0.0165 +0.0166
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1723 +0.0025 +0.0084 +0.0107 +0.0124 +0.0125
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1492 -0.0011 +0.0126 +0.0155 +0.0169 +0.0168
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1538 +0.0058 +0.0039 +0.0043 +0.0033 +0.0032
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5965 +0.0096 +0.0096
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2087 +0.0370 +0.0369

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0843 +0.0080 +0.0104 +0.0116 +0.0123 +0.0085
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0820 +0.0096 +0.0117 +0.0120 +0.0132 +0.0102
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0751 +0.0078 +0.0091 +0.0093 +0.0064
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0657 -0.0120 +0.0055 +0.0065 +0.0069 +0.0056
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0794 +0.0001 +0.0037 +0.0041 +0.0021 +0.0019
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0646 -0.0125 +0.0078 +0.0077 +0.0077 +0.0062
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1007 -0.0022 -0.0013 -0.0030 -0.0021 -0.0026
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5782 -0.0099 -0.0098
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1334 +0.0101 +0.0088

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0113 -0.0020 +0.0070 +0.0012 +0.0000 -0.0664
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0034 -0.0076 +0.0055 -0.0002 -0.0001 -0.0373
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0007 +0.0007 -0.0023 -0.0001 -0.0000 -0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0630 +0.0012 -0.0008 +0.0020 -0.0002 -0.0636
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0586 -0.0054 -0.0006 -0.0003 +0.0001 -0.0137
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0505 -0.0080 +0.0050 -0.0016 -0.0001 +0.0216
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1284 -0.0059 -0.0059 +0.0211 -0.0012 -0.1069
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0813 +0.0062 +0.0047 -0.0191 -0.0001 +0.0209
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1933 +0.0183 -0.0240 +0.0287 +0.0020 -0.0872
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1041 +0.0048 -0.0054 -0.0067 +0.0002 +0.0157
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0466 +0.0009 +0.0001 -0.0089 -0.0000 +0.0011
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2076 +0.0051 -0.0017 +0.0004 +0.0004 +0.0037
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1335 -0.0032 -0.0062 -0.0160 +0.0006 +0.1103
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0797 +0.0043 -0.0045 -0.0054 -0.0001 -0.0222
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0511 +0.0169 -0.0238 +0.0355 +0 -0.0454
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0210 +0.0009 +0.0076 -0.0005 +0.0006 -0.0529
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0012 -0.0089 +0.0045 +0.0004 +0.0011 -0.0410
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0141 +0.0054 -0.0044 +0.0010 +0.0033 +0.0072
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0536 +0.0013 +0.0005 -0.0055 +0.0004 -0.0674
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0584 -0.0060 -0.0005 -0.0005 -0.0005 -0.0113
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0506 -0.0084 +0.0078 -0.0007 +0.0020 +0.0176
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1539 -0.0077 -0.0028 +0.0144 -0.0004 -0.0668
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0756 +0.0048 +0.0016 -0.0170 -0.0057 +0.0256
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2366 +0.0504 -0.0481 +0.0073 +0.0089 -0.0377
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1034 +0.0031 -0.0032 -0.0081 +0.0006 +0.0269
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0445 +0.0011 -0.0008 -0.0084 -0.0000 +0.0024
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2193 +0.0036 -0.0008 +0.0016 +0.0018 +0.0142
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1176 +0.0005 -0.0096 -0.0297 +0.0070 +0.1060
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0812 +0.0056 -0.0034 -0.0033 +0.0038 -0.0311
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0497 +0.0405 -0.0089 +0.0322 +0.0276 -0.0951
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1400 +0.0343 +0.0202 -0.0086 +0.0005 -0.1683
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1207 +0.0169 -0.0058 +0.0004 +0.0004 -0.0896
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1235 +0.0117 -0.0078 +0.0011 -0.0001 -0.1373
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1394 +0.0441 -0.0007 -0.0136 +0.0007 -0.1593
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1322 +0.0164 -0.0031 -0.0002 +0.0007 -0.0878
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1351 +0.0170 -0.0063 +0.0017 +0.0006 -0.1335
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2060 +0.0445 +0.0761 -0.1281 +0.0017 -0.3666
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0421 -0.0103 +0.0134 -0.0147 -0.0018 -0.1073
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3011 -0.0030 +0.1483 +0.0078 -0.0120 -0.6444
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1881 +0.0037 +0.0045 +0.0051 +0.0002 -0.1626
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0433 +0.0676 -0.0087 -0.0168 +0.0006 -0.1090
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1840 +0.0316 +0.0062 -0.0049 +0.0001 -0.1514
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2318 -0.0093 +0.0378 -0.0706 +0.0033 -0.3482
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0633 +0.0977 -0.0155 +0.0159 +0.0001 -0.1846
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.6348 +0.0737 +0.1982 -0.0827 -0.0008 -0.6396
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0586 +0.0149 -0.0182 -0.0054 +0.1015 -0.1637
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0406 +0.0035 +0.0005 +0.0043 +0.0189 -0.0598
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0526 -0.0157 -0.0104 +0.0083 +0.0352 -0.0947
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0543 -0.0042 +0.0002 -0.0084 +0.0711 -0.1364
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0389 +0.0032 -0.0030 +0.0035 +0.0313 -0.0639
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0524 +0.0000 +0.0073 -0.0081 +0.0305 -0.1035
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0465 +0.0146 +0.0452 -0.0355 +0.0761 -0.2572
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0174 -0.0057 -0.0062 -0.0031 +0.0154 -0.0466
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0601 -0.1294 +0.1626 +0.0090 +0.0813 -0.5217
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0319 -0.0046 +0.0074 +0.0016 +0.0039 -0.0411
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0095 +0.0109 -0.0066 +0.0090 -0.0065 -0.0274
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0357 -0.0053 +0.0093 +0.0025 +0.0083 -0.0550
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0835 -0.0166 +0.0170 -0.0166 +0.0315 -0.1655
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0218 +0.0068 -0.0006 -0.0039 +0.0560 -0.1080
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.3011 -0.0891 -0.0032 -0.0082 +0.0618 -0.1911
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 17 -7.0700 -0.3200 -2.8700 -0.1300 -2.0300 -29.3727% -1.8476% -14.4439% -0.7589% -10.6674%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 6.9700 -5.7800 -2.1000 -1.3900 -2.3200 -1.1600 -45.3333% -23.1533% -16.6268% -24.9731% -14.2681%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 8.5500 -3.7600 -0.4100 -1.1100 -2.2600 -1.2400 -30.5443% -4.5759% -11.4907% -20.9066% -12.6660%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 3.9800 -0.2500 -0.4300 -0.9600 -0.3000 -5.9102% -9.7506% -19.4332% -7.0093%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 4.5300 -0.8500 +0.1500 -0.2200 -0.0100 -0.0300 -15.7993% +3.4247% -4.6316% -0.2203% -0.6579%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 4.6000 -0.8300 +0.4600 +0.1600 -0.0600 +0.3600 -15.2855% +11.1111% +3.6036% -1.2876% +8.4906%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 4.1000 -1.4500 -0.3200 -0.4300 -0.3600 -0.4400 -26.1261% -7.2398% -9.4923% -8.0717% -9.6916%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 13.0800 -14.5800 -6.6800 -5.2400 -6.2000 -4.8200 -52.7115% -33.8057% -28.6026% -32.1577% -26.9274%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.3700 -1.4200 -0.2200 -0.2800 +0.2800 +0.0100 -24.5250% -4.7930% -6.0215% +6.8460% +0.2294%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 4.7100 -1.5500 +0.3100 -1.1700 -0.3000 -24.7604% +7.0455% -19.8980% -5.9880%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 7.0600 +2.5400 +3.3300 +2.2600 +3.4200 +3.2300 +56.1947% +89.2761% +47.0833% +93.9560% +84.3342%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 3.8800 -1.8600 +0.3700 -0.0400 +0.4400 +0.1600 -32.4042% +10.5413% -1.0204% +12.7907% +4.3011%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 5.4200 -1.6500 -0.1100 -0.0900 -0.3200 -0.0500 -23.3380% -1.9892% -1.6334% -5.5749% -0.9141%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 5.8100 -1.7800 +0.0800 -0.3300 +0.2700 -0.0800 -23.4519% +1.3962% -5.3746% +4.8736% -1.3582%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 4.7600 -1.6900 +0.0900 +0.4600 +0.3500 +0.3400 -26.2016% +1.9272% +10.6977% +7.9365% +7.6923%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 4.9200 -2.4600 -0.0100 +0.2900 -0.7000 -0.0400 -33.3333% -0.2028% +6.2635% -12.4555% -0.8065%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.2900 -0.4500 +0.6300 +0.9000 +0.7000 -9.4937% +17.2131% +26.5487% +19.4986%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.4200 -0.8400 +0.5800 +0.6600 +0.3600 -15.9696% +15.1042% +17.5532% +8.8670%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500 3.6500 -1.0000 +0.2200 -0.0600 +0.2000 +0.1000 -21.5054% +6.4140% -1.6173% +5.7971% +2.8169%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200 3.9600 -0.2100 +0.6700 +0.2700 +0.6900 +0.4400 -5.0360% +20.3647% +7.3171% +21.1009% +12.5000%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.1000 -1.1800 +0.5700 +0.5000 +0.6100 +0.4000 -22.3485% +16.1473% +13.8889% +17.4785% +10.8108%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.2500 -1.2600 +0.4300 +0.1000 -0.5600 +0.2200 -22.8675% +11.2565% +2.4096% -11.6424% +5.4591%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.1800 -0.5500 +0.7200 +0.6100 +0.4100 -11.6279% +20.8092% +17.0868% +10.8753%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 4.5900 -0.0600 +0.9700 +0.8600 +0.8100 +1.0900 -1.2903% +26.7956% +23.0563% +21.4286% +31.1429%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 6.5600 -2.4800 +0.0100 +0.4600 -0.6500 -27.4336% +0.1527% +7.5410% -9.0153%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 4.9900 +0.5200 +0.8500 -0.5900 -0.2300 +11.6331% +20.5314% -10.5735% -4.4061%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 19.7800 -6.4000 -4.5000 -24.4461% -18.5338%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 10.6500 -2.2600 -1.7700 -17.5058% -14.2512%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 11.5400 -0.5200 -2.8700 -4.3118% -19.9167%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 25.0100 -2.5000 -3.2700 -9.0876% -11.5629%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 24.9900 -2.6800 -3.5100 -9.6856% -12.3158%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png