Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1377757 +281263 +70752 +65802 +84216 +84216 +25.6511% +5.4133% +5.0156% +6.5105% +6.5105%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 708451 +122129 +92689 +97741 +108570 +108570 +20.8297% +15.0527% +16.0045% +18.0986% +18.0986%
MTAC_3P_Standard 596590 623022 617574 607435 607435 717478 +120888 +94456 +99904 +110043 +110043 +20.2632% +15.1609% +16.1768% +18.1160% +18.1160%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 164525 +26977 +27686 +28965 +28965 +19.6128% +20.2325% +21.3669% +21.3669%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 183326 +27685 +26775 +26817 +28291 +28482 +17.7877% +17.1031% +17.1345% +18.2481% +18.3940%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 165049 +26540 +25664 +25757 +27164 +27262 +19.1612% +18.4123% +18.4914% +19.7005% +19.7856%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 185311 +26349 +26579 +26151 +27389 +27389 +16.5757% +16.7446% +16.4306% +17.3434% +17.3434%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1370384 +347648 +215715 +246511 +186300 +186300 +33.9920% +18.6820% +21.9341% +15.7337% +15.7337%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 58022 +17140 +16322 +15597 +15922 +15922 +41.9255% +39.1415% +36.7637% +37.8195% +37.8195%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 55772 +14703 +13370 +13749 +14620 +14620 +35.8007% +31.5315% +32.7178% +35.5268% +35.5268%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 45965 +37225 +22850 +22950 +23052 +23052 +425.9153% +98.8536% +99.7176% +100.6066% +100.6066%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31782 +14847 +14229 +13373 +13434 +13434 +87.6705% +81.0631% +72.6438% +73.2178% +73.2178%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 125567 +25659 +22676 +26584 +26919 +26919 +25.6826% +22.0389% +26.8571% +27.2879% +27.2879%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 92933 +21835 +20205 +21488 +21807 +21807 +30.7111% +27.7816% +30.0763% +30.6597% +30.6597%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 135352 +29648 +28855 +29730 +30918 +30840 +28.0481% +27.0947% +28.1475% +29.6053% +29.5086%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 141165 +26008 +23849 +26843 +28084 +27915 +22.5848% +20.3289% +23.4802% +24.8353% +24.6490%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 21190 +10996 +10384 +9952 +9957 +9957 +107.8674% +96.0948% +88.5567% +88.6406% +88.6406%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 22263 +7456 +6830 +6222 +6564 +6564 +50.3546% +44.2558% +38.7881% +41.8116% +41.8116%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 34263 +12553 +12368 +11683 +11800 +11800 +57.8213% +56.4878% +51.7405% +52.5308% +52.5308%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 35343 +9483 +9200 +9083 +9718 +9718 +36.6705% +35.1911% +34.5887% +37.9239% +37.9239%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20982 +17498 +14084 +14148 +14148 +502.2388% +204.1751% +207.0237% +207.0237%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 30606 +19907 +19132 +17724 +17717 +17717 +186.0641% +166.7422% +137.5873% +137.4583% +137.4583%
SCP_Astral_MBR 92167 93585 91884 90864 90838 120706 +28539 +27121 +28822 +29842 +29868 +30.9644% +28.9801% +31.3678% +32.8425% +32.8805%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1989602 +213474 +214256 +12.0191% +12.0684%
EWZ_2P_MBR_Exploris_Human 836809 836809 935190 +98381 +98381 +11.7567% +11.7567%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1041070 +126146 +127121 +13.7876% +13.9090%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2345557 +267523 +267521 +12.8739% +12.8737%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2345557 +267523 +267521 +12.8739% +12.8737%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 154647 +43143 +21028 +23288 +22616 +22616 +38.6919% +15.7373% +17.7285% +17.1293% +17.1293%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 137008 +28741 +19656 +22349 +22192 +22192 +26.5464% +16.7496% +19.4917% +19.3283% +19.3283%
MTAC_3P_Standard 110265 118693 115800 116148 116148 138609 +28344 +19916 +22809 +22461 +22461 +25.7053% +16.7794% +19.6969% +19.3383% +19.3383%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 59855 +10997 +10823 +10860 +10860 +22.5081% +22.0733% +22.1655% +22.1655%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 66327 +12358 +11252 +10487 +10443 +10506 +22.8983% +20.4303% +18.7804% +18.6869% +18.8209%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 60404 +11783 +10739 +10115 +9944 +9989 +24.2344% +21.6229% +20.1137% +19.7067% +19.8135%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66681 +11621 +10762 +9974 +9854 +9854 +21.1061% +19.2457% +17.5887% +17.3403% +17.3403%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75361 +24089 +16577 +20314 +16768 +16796 +46.9828% +28.1999% +36.9030% +28.6178% +28.6792%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21801 +7361 +6843 +6552 +6094 +6094 +50.9765% +45.7481% +42.9668% +38.7980% +38.7980%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20566 +6083 +5501 +5650 +5496 +5494 +42.0010% +36.5151% +37.8788% +36.4698% +36.4517%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18582 +9842 +9206 +9193 +9218 +9197 +112.6087% +98.1869% +97.9125% +98.4408% +97.9968%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17665 +8767 +8406 +7881 +7855 +7855 +98.5278% +90.7873% +80.5499% +80.0714% +80.0714%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 45088 +10223 +8791 +10746 +10663 +10663 +29.3217% +24.2196% +31.2911% +30.9746% +30.9746%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 33583 +8934 +8117 +8464 +8360 +8360 +36.2449% +31.8739% +33.6956% +33.1444% +33.1444%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 49330 +12642 +11654 +11681 +11909 +11871 +34.4581% +30.9322% +31.0261% +31.8244% +31.6906%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50507 +10351 +8962 +10464 +10614 +10561 +25.7770% +21.5718% +26.1319% +26.6062% +26.4382%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8440 +4774 +4491 +4231 +4194 +4194 +130.2237% +113.7250% +100.5227% +98.7753% +98.7753%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8635 +3336 +3024 +2780 +2569 +2568 +62.9553% +53.8941% +47.4808% +42.3508% +42.3273%
SCP_Astral_250pg_3ms 675 721 908 879 879
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13474 +5680 +5502 +5222 +5068 +5066 +72.8766% +69.0166% +63.2816% +60.2903% +60.2521%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 13091 +3933 +3749 +3720 +3677 +3676 +42.9461% +40.1306% +39.6969% +39.0588% +39.0441%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 9190 +7344 +6590 +6604 +6601 +397.8332% +253.4615% +255.3751% +254.9633%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12170 +8296 +8015 +7396 +7365 +7366 +214.1456% +192.9001% +154.9225% +153.2778% +153.3306%
SCP_Astral_MBR 24110 24991 24570 24544 24527 33239 +9129 +8248 +8669 +8695 +8712 +37.8640% +33.0039% +35.2829% +35.4262% +35.5200%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64482 +9211 +9335 +16.6652% +16.9275%
EWZ_2P_MBR_Exploris_Human 48465 48473 56001 +7536 +7528 +15.5494% +15.5303%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 60150 +8904 +8973 +17.3750% +17.5333%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80550 +7272 +7273 +9.9239% +9.9254%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80550 +7272 +7273 +9.9239% +9.9254%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92864 +4944 -24 -1118 -577 -1422 +5.6233% -0.0258% -1.1896% -0.6175% -1.5082%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 69710 +5937 +5736 +6099 +6695 +3875 +9.3096% +8.9661% +9.5880% +10.6245% +5.8859%
MTAC_3P_Standard 64317 64464 64219 63385 65967 70534 +6217 +6070 +6315 +7149 +4567 +9.6662% +9.4161% +9.8335% +11.2787% +6.9232%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13265 +1198 +1295 +1325 +1026 +9.9279% +10.8187% +11.0972% +8.3830%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13478 +1046 +1007 +1116 +1150 +818 +8.4138% +8.0747% +9.0277% +9.3284% +6.4613%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 13076 +1068 +1029 +1116 +1108 +896 +8.8941% +8.5415% +9.3311% +9.2580% +7.3563%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13562 +1001 +1097 +1085 +1152 +788 +7.9691% +8.8006% +8.6960% +9.2828% +6.1688%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 160286 +14062 +6752 +6296 +4459 +3000 +9.6168% +4.3977% +4.0886% +2.8615% +1.9074%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12375 +3212 +2847 +2790 +3041 +2353 +35.0540% +29.8804% +29.1080% +32.5798% +23.4783%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 12077 +2779 +2316 +2665 +2524 +2088 +29.8881% +23.7271% +28.3149% +26.4210% +20.9030%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 10186 +7736 +4102 +3939 +4070 +3837 +315.7551% +67.4227% +63.0543% +66.5468% +60.4347%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 7066 +2363 +2478 +2108 +2143 +2117 +50.2445% +54.0105% +42.5171% +43.5304% +42.7763%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18201 +2011 +1921 +2176 +2146 +1665 +12.4212% +11.7998% +13.5788% +13.3666% +10.0689%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15726 +2127 +1885 +2038 +2055 +1742 +15.6409% +13.6190% +14.8890% +15.0318% +12.4571%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18812 +2560 +2536 +2695 +2887 +2354 +15.7519% +15.5812% +16.7215% +18.1287% +14.3031%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19520 +2503 +2342 +2607 +2775 +2171 +14.7088% +13.6337% +15.4142% +16.5721% +12.5137%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 6303 +2656 +2390 +2439 +2764 +2489 +72.8270% +61.0785% +63.1211% +78.1012% +65.2596%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6481 +2181 +1878 +1684 +1504 +1312 +50.7209% +40.7995% +35.1053% +30.2190% +25.3821%
SCP_Astral_250pg_3ms 576 22 936 741 736
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8686 +2441 +2340 +2670 +2559 +2467 +39.0873% +36.8736% +44.3816% +41.7660% +39.6688%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8569 +1847 +1840 +1557 +1546 +1227 +27.4769% +27.3443% +22.2048% +22.0134% +16.7121%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5671 +4689 +3306 +3494 +3435 +477.4949% +139.7886% +160.4961% +153.6225%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7671 +3963 +3664 +3626 +3753 +3568 +106.8770% +91.4400% +89.6415% +95.7887% +86.9608%
SCP_Astral_MBR 20165 20129 20074 19793 19898 22101 +1936 +1972 +2027 +2308 +2203 +9.6008% +9.7968% +10.0976% +11.6607% +11.0715%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5086 +401 +386 +454 +347 +8.5592% +8.2128% +9.8014% +7.3222%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 255602 +10343 +8180 +4.2172% +3.3061%
EWZ_2P_MBR_Exploris_Human 115447 117345 119120 +3673 +1775 +3.1815% +1.5126%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 135794 +6826 +5088 +5.2928% +3.8927%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 195363 +17189 +11820 +9.6473% +6.4399%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 195363 +17189 +11820 +9.6473% +6.4399%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8548 +703 +373 +393 +345 +299 +8.9611% +4.5627% +4.8191% +4.2058% +3.6247%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12747 +1386 +1253 +1396 +1409 +949 +12.1996% +10.9013% +12.2985% +12.4272% +8.0437%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12880 +1407 +1320 +1403 +1484 +1048 +12.2636% +11.4187% +12.2244% +13.0221% +8.8573%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4558 +430 +466 +458 +375 +10.4167% +11.3881% +11.1707% +8.9649%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4593 +378 +345 +375 +379 +256 +8.9680% +8.1215% +8.8905% +8.9938% +5.9027%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4478 +403 +344 +388 +381 +293 +9.8896% +8.3212% +9.4866% +9.2995% +7.0012%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4628 +379 +391 +384 +397 +274 +8.9197% +9.2282% +9.0481% +9.3831% +6.2931%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8190 +935 +608 +850 +711 +653 +12.8877% +8.0190% +11.5804% +9.5066% +8.6639%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4452 +1207 +1063 +1041 +1134 +891 +37.1957% +31.3662% +30.5189% +34.1772% +25.0211%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4314 +1060 +881 +1023 +880 +822 +32.5753% +25.6627% +31.0848% +25.6261% +23.5395%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3822 +1372 +1426 +1372 +1425 +1388 +56.0000% +59.5159% +56.0000% +59.4493% +57.0255%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3757 +1249 +1321 +1123 +1115 +1174 +49.8006% +54.2282% +42.6348% +42.2029% +45.4510%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6352 +773 +696 +848 +806 +698 +13.8555% +12.3055% +15.4070% +14.5330% +12.3452%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5507 +786 +669 +724 +696 +663 +16.6490% +13.8280% +15.1369% +14.4668% +13.6870%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6632 +1021 +977 +1036 +1079 +919 +18.1964% +17.2767% +18.5132% +19.4309% +16.0861%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6809 +963 +860 +966 +1004 +844 +16.4728% +14.4562% +16.5326% +17.2954% +14.1492%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2382 +1090 +958 +976 +1094 +1023 +84.3653% +67.2753% +69.4168% +84.9379% +75.2759%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2392 +824 +732 +634 +519 +522 +52.5510% +44.0964% +36.0637% +27.7096% +27.9144%
SCP_Astral_250pg_3ms 307 8 350 283 281
SCP_Astral_250pg_6ms 637 756 751 766 767
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3200 +993 +925 +1031 +970 +983 +44.9932% +40.6593% +47.5334% +43.4978% +44.3392%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3118 +715 +730 +641 +579 +520 +29.7545% +30.5695% +25.8781% +22.8043% +20.0154%
SCP_Astral_500pg_3ms 525 902 828 835 2213 +1688 +1311 +1385 +1378 +321.5238% +145.3437% +167.2705% +165.0299%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2864 +1546 +1417 +1378 +1429 +1396 +117.2989% +97.9267% +92.7322% +99.5819% +95.0954%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5387 +679 +667 +675 +672 +671 +14.4223% +14.1314% +14.3251% +14.2524% +14.2282%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5086 +401 +386 +454 +347 +8.5592% +8.2128% +9.8014% +7.3222%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7541 +500 +435 +7.1013% +6.1216%
EWZ_2P_MBR_Exploris_Human 6167 6284 6473 +306 +189 +4.9619% +3.0076%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7462 +575 +499 +8.3491% +7.1665%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6423 +619 +468 +10.6651% +7.8589%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6423 +619 +468 +10.6651% +7.8589%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92848 -1431
MTAC_3P_Alternating 65832 69697 +3865
MTAC_3P_Standard 65967 70525 +4558
MTAC_Yeast_Alternating_3min 12239 13263 +1024
MTAC_Yeast_Alternating_5min 12660 13477 +817
MTAC_Yeast_Standard_3min 12180 13076 +896
MTAC_Yeast_Standard_5min 12772 13562 +790
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 160284 +2999
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12375 +2353
SCP_Astral_1000pg_24ms 9989 12075 +2086
SCP_Astral_1000pg_3ms 6349 10183 +3834
SCP_Astral_1000pg_6ms 4949 7060 +2111
SCP_Astral_10ng_12ms 16536 18201 +1665
SCP_Astral_10ng_24ms 13982 15726 +1744
SCP_Astral_10ng_3ms 16458 18811 +2353
SCP_Astral_10ng_6ms 17349 19520 +2171
SCP_Astral_250pg_12ms 3814 6303 +2489
SCP_Astral_250pg_24ms 5169 6481 +1312
SCP_Astral_250pg_3ms 736
SCP_Astral_250pg_6ms 2066
SCP_Astral_500pg_12ms 6219 8686 +2467
SCP_Astral_500pg_24ms 7342 8568 +1226
SCP_Astral_500pg_3ms 2234 5667 +3433
SCP_Astral_500pg_6ms 4103 7669 +3566
SCP_Astral_MBR 19891 22101 +2210
Seer_Astral_45 242898
Seer_Astral_single 4739 5086 +347
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 255589 +8167
EWZ_2P_MBR_Exploris_Human 117340 119109 +1769
EWZ_2P_MBR_Exploris_YeastHuman 130702 135788 +5086
MacCoss_Eclipse_Normalization_noNorm 183540 195363 +11823
MacCoss_Eclipse_Normalization_yesNorm 183540 195363 +11823

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0012 -0.0001 -0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0002 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0001 +0.0004 +0.0000 +0.0009 +0.0007 +0.0007
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0001 +0.0013 -0.0005 +0.0005 +0.0007 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0006 +0.0021 +0.0025 +0.0032 +0.0032
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0002 +0.0006 +0.0015 +0.0016 +0.0017 +0.0017
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0000 +0.0019 +0.0013 +0.0012 +0.0020 +0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0012 +0.0023 +0.0032 +0.0037 +0.0038
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 0.0001 -0.0005 -0.0005
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0010 +0.0012 +0.0007 +0.0021 +0.0005 +0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0012 +0.0010 +0.0017 +0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0025 +0.0079 +0.0058 +0.0057 +0.0071 +0.0071
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0011 +0.0041 +0.0059 +0.0041 +0.0050 +0.0057
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0030 +0.0033 +0.0042 +0.0066 +0.0056 +0.0056
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0013 +0.0035 +0.0029 +0.0037 +0.0037
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0018 +0.0039 +0.0010 +0.0033 +0.0031 +0.0031
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0009 +0.0033 +0.0035 +0.0027 +0.0027 +0.0027
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0001 +0.0009 +0.0000 +0.0022 +0.0013 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0011 +0.0049 +0.0051 +0.0008 +0.0063 +0.0063
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0031 +0.0033 +0.0042 +0.0055 +0.0062 +0.0062
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0034 +0.0102 +0.0034 +0.0034
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0028 +0.0079 +0.0055 +0.0078 +0.0073
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0034 +0.0056 +0.0044 +0.0062 +0.0060 +0.0060
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0041 +0.0054 +0.0065 +0.0053 +0.0052 +0.0052
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0036 +0.0049 +0.0059 +0.0071 +0.0071
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0055 +0.0086 +0.0087 +0.0069 +0.0069
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0014 +0.0041 +0.0034 +0.0029 +0.0036 +0.0036
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 0.0004 +0.0030 +0.0032
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0023 +0.0007 -0.0009
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0022 -0.0012 -0.0012 -0.0028 -0.0030 -0.0012
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0010 +0.0003 +0.0015 +0.0019 +0.0016 +0.0033
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0002 +0.0063 +0.0050 +0.0046 +0.0042
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0004 +0.0037 +0.0034 +0.0044 +0.0029 +0.0053
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0014 +0.0045 +0.0034 +0.0006 +0.0014 +0.0011
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0005 +0.0041 +0.0050 +0.0060 +0.0059
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0045 -0.0042 -0.0014
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0006 +0.0023 -0.0005 +0.0022 +0.0003 +0.0011
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0049 +0.0000 -0.0007 -0.0006 -0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0011 +0.0081 +0.0069 +0.0081 +0.0081 +0.0094
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0036 +0.0023 +0.0023 +0.0036 +0.0036 +0.0051
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 0.0001 +0.0019 +0.0050 +0.0044 +0.0046 +0.0047
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0018 +0.0036 +0.0021 +0.0035 +0.0042
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0014 +0.0019 +0.0009 +0.0003 +0.0031 +0.0022
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0008 +0.0045 +0.0081 +0.0074 +0.0069 +0.0068
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0003 +0.0051 +0.0017 +0.0051 +0.0043 +0.0046
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0011 +0.0064 +0.0087 +0.0045 +0.0075 +0.0072
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0005 +0.0037 +0.0037 +0.0021 +0.0008 +0.0037
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0029 +0.0057 +0.0029 +0.0115 +0.0029 +0.0029
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0090 +0.0189 +0.0156 +0.0174 +0.0178 +0.0178
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0011 +0.0047 +0.0050 -0.0003 +0.0031 +0.0035
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0019 +0.0001 -0.0018 +0.0032 +0.0043 +0.0041
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0016 +0.0026 -0.0086 -0.0036 -0.0014 -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0008 +0.0053 +0.0054 +0.0016 +0.0064 +0.0051
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0010 +0.0069 +0.0040 +0.0035 +0.0060 +0.0066
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0022 +0.0096 +0.0095
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0008 +0.0004 +0.0004
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0001 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0001 +0.0002 -0.0002 +0.0003 +0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0001 +0.0010 -0.0001 +0.0005 +0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0004 +0.0014 +0.0017 +0.0018 +0.0018
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0005 +0.0009 +0.0013 +0.0015 +0.0014 +0.0014
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0002 +0.0010 +0.0009 +0.0010 +0.0012 +0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0012 +0.0020 +0.0022 +0.0027 +0.0027
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0004 +0.0001 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0011 +0.0016 +0.0006 +0.0017 +0.0011 +0.0011
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0005 +0.0010 +0.0024 +0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0016 +0.0061 +0.0044 +0.0046 +0.0053 +0.0053
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0007 +0.0027 +0.0036 +0.0033 +0.0033 +0.0041
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0025 +0.0023 +0.0031 +0.0053 +0.0049 +0.0049
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0006 +0.0022 +0.0015 +0.0021 +0.0021
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0011 +0.0024 +0.0007 +0.0023 +0.0019 +0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0009 +0.0028 +0.0029 +0.0024 +0.0023 +0.0023
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0004 +0.0009 +0.0002 +0.0016 +0.0012 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0014 +0.0044 +0.0041 +0.0016 +0.0045 +0.0045
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0021 +0.0028 +0.0029 +0.0035 +0.0035 +0.0035
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0029 +0.0088 +0.0029 +0.0029
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0031 +0.0068 +0.0052 +0.0061 +0.0061
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0029 +0.0047 +0.0032 +0.0049 +0.0042 +0.0042
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0030 +0.0045 +0.0047 +0.0047 +0.0046 +0.0046
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0047 +0.0028 +0.0050 +0.0062 +0.0062
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0042 +0.0067 +0.0061 +0.0052 +0.0052
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0017 +0.0035 +0.0032 +0.0025 +0.0030 +0.0030
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0007 +0.0019 +0.0021
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0009 +0.0007 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0009 -0.0008 -0.0007 -0.0012 -0.0012 -0.0004
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0002 +0.0006 +0.0012 +0.0019 +0.0016 +0.0022
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 0.0005 +0.0041 +0.0038 +0.0034 +0.0027
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0010 +0.0047 +0.0031 +0.0035 +0.0023 +0.0035
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 0.0005 +0.0043 +0.0040 +0.0018 +0.0020 +0.0023
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0009 +0.0032 +0.0036 +0.0046 +0.0043
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0015 -0.0011 +0.0006
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0006 +0.0020 -0.0013 +0.0011 +0.0010 +0.0013
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0032 +0.0005 -0.0010 -0.0000 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0019 +0.0068 +0.0075 +0.0077 +0.0062 +0.0079
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0033 +0.0011 +0.0000 +0.0008 -0.0002 +0.0032
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 -0.0000 +0.0025 +0.0035 +0.0040 +0.0040 +0.0033
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0030 +0.0017 +0.0000 +0.0011 +0.0014
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 -0.0008 +0.0024 +0.0005 +0.0006 +0.0017 +0.0022
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 -0.0002 +0.0020 +0.0044 +0.0036 +0.0031 +0.0038
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0003 +0.0035 +0.0016 +0.0035 +0.0026 +0.0030
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0006 +0.0045 +0.0047 +0.0025 +0.0036 +0.0050
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0009 +0.0004 +0.0022 -0.0006 -0.0009 +0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0042 +0.0102 +0.0123 +0.0088 +0.0042 +0.0042
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0079 +0.0179 +0.0148 +0.0134 +0.0127 +0.0127
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0025 +0.0065 +0.0060 +0.0032 +0.0052 +0.0047
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0018 +0.0001 -0.0019 +0.0025 +0.0027 +0.0049
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 -0.0008 +0.0024 -0.0074 -0.0036 -0.0011 -0.0011
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0011 +0.0031 +0.0033 +0.0002 +0.0039 +0.0029
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0007 +0.0031 +0.0025 +0.0030 +0.0036 +0.0048
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0023 +0.0097 +0.0091
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 13342 -11053 -11246

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 768 -3 +6

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0576 +0.0260 +0.0266

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 688 -156 +1317

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -48 -238 -104

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 2 +1 +0 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1773 +0.0314 +0.0353 +0.0373 +0.0400 +0.0398
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1715 +0.0322 +0.0352 +0.0363 +0.0391 +0.0390
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1799 +0.0343 +0.0375 +0.0391 +0.0390
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1665 +0.0134 +0.0256 +0.0289 +0.0309 +0.0310
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1857 +0.0160 +0.0218 +0.0242 +0.0258 +0.0260
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1643 +0.0140 +0.0277 +0.0306 +0.0320 +0.0320
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1562 +0.0082 +0.0063 +0.0066 +0.0057 +0.0056
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5979 +0.0110 +0.0109
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2124 +0.0408 +0.0407

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0875 +0.0112 +0.0136 +0.0148 +0.0155 +0.0117
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0844 +0.0120 +0.0141 +0.0144 +0.0156 +0.0126
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0789 +0.0116 +0.0129 +0.0131 +0.0102
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0685 -0.0093 +0.0082 +0.0093 +0.0097 +0.0084
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0818 +0.0026 +0.0062 +0.0065 +0.0046 +0.0044
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0666 -0.0105 +0.0098 +0.0097 +0.0097 +0.0082
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1018 -0.0010 -0.0001 -0.0018 -0.0009 -0.0015
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5785 -0.0096 -0.0095
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1374 +0.0141 +0.0127

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0143 -0.0020 +0.0070 +0.0012 +0.0000 -0.0634
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0040 -0.0076 +0.0055 -0.0002 -0.0001 -0.0368
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 -0.0006 +0.0007 -0.0023 -0.0001 -0.0000 -0.0002
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0619 +0.0012 -0.0008 +0.0020 -0.0002 -0.0647
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0623 -0.0054 -0.0006 -0.0003 +0.0001 -0.0100
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0571 -0.0080 +0.0050 -0.0016 -0.0001 +0.0282
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1328 -0.0059 -0.0059 +0.0211 -0.0012 -0.1025
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0795 +0.0062 +0.0047 -0.0191 -0.0001 +0.0191
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1971 +0.0183 -0.0240 +0.0287 +0.0020 -0.0834
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1060 +0.0048 -0.0054 -0.0067 +0.0002 +0.0175
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0469 +0.0009 +0.0001 -0.0089 -0.0000 +0.0013
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2085 +0.0051 -0.0017 +0.0004 +0.0004 +0.0046
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1372 -0.0032 -0.0062 -0.0160 +0.0006 +0.1141
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0806 +0.0043 -0.0045 -0.0054 -0.0001 -0.0213
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0461 +0.0169 -0.0238 +0.0355 +0 -0.0504
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0168 +0.0009 +0.0076 -0.0005 +0.0006 -0.0572
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0025 -0.0089 +0.0045 +0.0004 +0.0011 -0.0397
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0121 +0.0054 -0.0044 +0.0010 +0.0033 +0.0053
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0563 +0.0013 +0.0005 -0.0055 +0.0004 -0.0647
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0640 -0.0060 -0.0005 -0.0005 -0.0005 -0.0056
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0532 -0.0084 +0.0078 -0.0007 +0.0020 +0.0202
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1593 -0.0077 -0.0028 +0.0144 -0.0004 -0.0614
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0762 +0.0048 +0.0016 -0.0170 -0.0057 +0.0262
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2432 +0.0504 -0.0481 +0.0073 +0.0089 -0.0311
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1041 +0.0031 -0.0032 -0.0081 +0.0006 +0.0275
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0447 +0.0011 -0.0008 -0.0084 -0.0000 +0.0026
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2206 +0.0036 -0.0008 +0.0016 +0.0018 +0.0155
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1127 +0.0005 -0.0096 -0.0297 +0.0070 +0.1012
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0850 +0.0056 -0.0034 -0.0033 +0.0038 -0.0272
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0476 +0.0405 -0.0089 +0.0322 +0.0276 -0.0972
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1653 +0.0343 +0.0202 -0.0086 +0.0005 -0.1431
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1390 +0.0169 -0.0058 +0.0004 +0.0004 -0.0713
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1556 +0.0117 -0.0078 +0.0011 -0.0001 -0.1051
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1701 +0.0441 -0.0007 -0.0136 +0.0007 -0.1286
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1483 +0.0164 -0.0031 -0.0002 +0.0007 -0.0717
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1557 +0.0170 -0.0063 +0.0017 +0.0006 -0.1129
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2219 +0.0445 +0.0761 -0.1281 +0.0017 -0.3506
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0471 -0.0103 +0.0134 -0.0147 -0.0018 -0.1023
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3783 -0.0030 +0.1483 +0.0078 -0.0120 -0.5672
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1869 +0.0037 +0.0045 +0.0051 +0.0002 -0.1638
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0462 +0.0676 -0.0087 -0.0168 +0.0006 -0.1061
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1909 +0.0316 +0.0062 -0.0049 +0.0001 -0.1445
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2560 -0.0093 +0.0378 -0.0706 +0.0033 -0.3241
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0760 +0.0977 -0.0155 +0.0159 +0.0001 -0.1719
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.6084 +0.0737 +0.1982 -0.0827 -0.0008 -0.6659
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0611 +0.0149 -0.0182 -0.0054 +0.1015 -0.1611
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0392 +0.0035 +0.0005 +0.0043 +0.0189 -0.0611
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0544 -0.0157 -0.0104 +0.0083 +0.0352 -0.0929
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0593 -0.0042 +0.0002 -0.0084 +0.0711 -0.1314
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0427 +0.0032 -0.0030 +0.0035 +0.0313 -0.0602
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0705 +0.0000 +0.0073 -0.0081 +0.0305 -0.0854
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0464 +0.0146 +0.0452 -0.0355 +0.0761 -0.2573
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0188 -0.0057 -0.0062 -0.0031 +0.0154 -0.0451
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0613 -0.1294 +0.1626 +0.0090 +0.0813 -0.5205
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0316 -0.0046 +0.0074 +0.0016 +0.0039 -0.0414
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0100 +0.0109 -0.0066 +0.0090 -0.0065 -0.0268
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0381 -0.0053 +0.0093 +0.0025 +0.0083 -0.0525
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0762 -0.0166 +0.0170 -0.0166 +0.0315 -0.1728
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0214 +0.0068 -0.0006 -0.0039 +0.0560 -0.1084
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1798 -0.0891 -0.0032 -0.0082 +0.0618 -0.3125
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 20.0100 -4.0600 +2.6900 +0.1400 +2.8800 +0.9800 -16.8675% +15.5312% +0.7046% +16.8126% +5.1498%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10.1700 -2.5800 +1.1000 +1.8100 +0.8800 +2.0400 -20.2353% +12.1279% +21.6507% +9.4726% +25.0923%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 10.3300 -1.9800 +1.3700 +0.6700 -0.4800 +0.5400 -16.0845% +15.2902% +6.9358% -4.4403% +5.5158%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.0900 +0.8600 +0.6800 +0.1500 +0.8100 +20.3310% +15.4195% +3.0364% +18.9252%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.1900 -0.1900 +0.8100 +0.4400 +0.6500 +0.6300 -3.5316% +18.4932% +9.2632% +14.3172% +13.8158%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.1000 -0.3300 +0.9600 +0.6600 +0.4400 +0.8600 -6.0773% +23.1884% +14.8649% +9.4421% +20.2830%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.1300 -0.4200 +0.7100 +0.6000 +0.6700 +0.5900 -7.5676% +16.0633% +13.2450% +15.0224% +12.9956%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 16.5900 -11.0700 -3.1700 -1.7300 -2.6900 -1.3100 -40.0217% -16.0425% -9.4432% -13.9523% -7.3184%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.8700 -0.9200 +0.2800 +0.2200 +0.7800 +0.5100 -15.8895% +6.1002% +4.7312% +19.0709% +11.6972%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.2800 -0.9800 +0.8800 -0.6000 +0.2700 -15.6550% +20.0000% -10.2041% +5.3892%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.1400 +0.6200 +1.4100 +0.3400 +1.5000 +1.3100 +13.7168% +37.8016% +7.0833% +41.2088% +34.2037%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.4300 -1.3100 +0.9200 +0.5100 +0.9900 +0.7100 -22.8223% +26.2108% +13.0102% +28.7791% +19.0860%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.3400 -0.7300 +0.8100 +0.8300 +0.6000 +0.8700 -10.3253% +14.6474% +15.0635% +10.4530% +15.9049%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.2000 -1.3900 +0.4700 +0.0600 +0.6600 +0.3100 -18.3136% +8.2024% +0.9772% +11.9134% +5.2632%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 6.2800 -0.1700 +1.6100 +1.9800 +1.8700 +1.8600 -2.6357% +34.4754% +46.0465% +42.4036% +42.0814%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.9500 -0.4300 +2.0200 +2.3200 +1.3300 +1.9900 -5.8266% +40.9736% +50.1080% +23.6655% +40.1210%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.6700 -0.0700 +1.0100 +1.2800 +1.0800 -1.4768% +27.5956% +37.7581% +30.0836%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.6700 -0.5900 +0.8300 +0.9100 +0.6100 -11.2167% +21.6146% +24.2021% +15.0246%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.5800 -0.7000 +1.0500 +0.9800 +1.0900 +0.8800 -13.2576% +29.7450% +27.2222% +31.2321% +23.7838%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.8400 -0.6700 +1.0200 +0.6900 +0.0300 +0.8100 -12.1597% +26.7016% +16.6265% +0.6237% +20.0993%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 5.7100 +0.9800 +2.2500 +2.1400 +1.9400 +20.7188% +65.0289% +59.9440% +51.4589%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.4500 +0.8000 +1.8300 +1.7200 +1.6700 +1.9500 +17.2043% +50.5525% +46.1126% +44.1799% +55.7143%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 7.9200 -1.1200 +1.3700 +1.8200 +0.7100 -12.3894% +20.9160% +29.8361% +9.8474%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.0300 +0.5600 +0.8900 -0.5500 -0.1900 +12.5280% +21.4976% -9.8566% -3.6398%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 25.4200 -0.7600 +1.1400 -2.9030% +4.6952%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 13.5500 +0.6400 +1.1300 +4.9574% +9.0982%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 14.9500 +2.8900 +0.5400 +23.9635% +3.7474%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 38.5700 +11.0600 +10.2900 +40.2036% +36.3861%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 38.5300 +10.8600 +10.0300 +39.2483% +35.1930%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png