Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6228909
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1293541 1378494 +282000 +71489 +66539 +84953 +84953 +25.7183% +5.4697% +5.0717% +6.5675% +6.5675%
MTAC_3P_Alternating 586322 615762 610710 599881 599881 703122 +116800 +87360 +92412 +103241 +103241 +19.9208% +14.1873% +15.1319% +17.2102% +17.2102%
MTAC_3P_Standard 596590 623022 617574 607435 607435 708570 +111980 +85548 +90996 +101135 +101135 +18.7700% +13.7311% +14.7344% +16.6495% +16.6495%
MTAC_Yeast_Alternating_3min 137548 136839 135560 135560 163425 +25877 +26586 +27865 +27865 +18.8131% +19.4287% +20.5555% +20.5555%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 154844 181889 +26248 +25338 +25380 +26854 +27045 +16.8645% +16.1851% +16.2163% +17.3213% +17.4660%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 137787 163916 +25407 +24531 +24624 +26031 +26129 +18.3432% +17.5995% +17.6780% +18.8788% +18.9633%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 157922 183362 +24400 +24630 +24202 +25440 +25440 +15.3496% +15.5167% +15.2061% +16.1092% +16.1092%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3638373
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1184084 1369167 +346431 +214498 +245294 +185083 +185083 +33.8730% +18.5766% +21.8258% +15.6309% +15.6309%
SCIEX_3P 672242 749525 722698 714454 714454
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 42100 57834 +16952 +16134 +15409 +15734 +15734 +41.4657% +38.6906% +36.3206% +37.3729% +37.3729%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 41152 55410 +14341 +13008 +13387 +14258 +14258 +34.9193% +30.6778% +31.8564% +34.6472% +34.6472%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 22913 45981 +37241 +22866 +22966 +23068 +23068 +426.0984% +98.9228% +99.7871% +100.6765% +100.6765%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 18348 31735 +14800 +14182 +13326 +13387 +13387 +87.3930% +80.7953% +72.3885% +72.9616% +72.9616%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 98648 125605 +25697 +22714 +26622 +26957 +26957 +25.7207% +22.0758% +26.8955% +27.3265% +27.3265%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 71126 92665 +21567 +19937 +21220 +21539 +21539 +30.3342% +27.4131% +29.7012% +30.2829% +30.2829%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 104512 134773 +29069 +28276 +29151 +30339 +30261 +27.5004% +26.5510% +27.5994% +29.0509% +28.9546%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 113250 140983 +25826 +23667 +26661 +27902 +27733 +22.4268% +20.1737% +23.3210% +24.6743% +24.4883%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 11233 21420 +11226 +10614 +10182 +10187 +10187 +110.1236% +98.2232% +90.6033% +90.6882% +90.6882%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 15699 22241 +7434 +6808 +6200 +6542 +6542 +50.2060% +44.1133% +38.6510% +41.6714% +41.6714%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 2386
SCP_Astral_250pg_6ms 1436 4783 5690 5731 5731
SCP_Astral_500pg_12ms 21710 21895 22580 22463 22463 34624 +12914 +12729 +12044 +12161 +12161 +59.4841% +58.1366% +53.3392% +54.1379% +54.1379%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 25625 35171 +9311 +9028 +8911 +9546 +9546 +36.0054% +34.5331% +33.9337% +37.2527% +37.2527%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 20936 +17452 +14038 +14102 +14102 +500.9185% +203.5083% +206.3506% +206.3506%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 12889 30652 +19953 +19178 +17770 +17763 +17763 +186.4941% +167.1431% +137.9444% +137.8152% +137.8152%
SCP_Astral_MBR 92167 93585 91884 90864 90838 119248 +27081 +25663 +27364 +28384 +28410 +29.3825% +27.4221% +29.7810% +31.2379% +31.2755%
Seer_Astral_45 2512737 3124006 3135497 2971207 2971207
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17626526
EWZ_2P_MBR_Exploris 1776128 1775346 1978304 +202176 +202958 +11.3830% +11.4320%
EWZ_2P_MBR_Exploris_Human 836809 836809 929966 +93157 +93157 +11.1324% +11.1324%
EWZ_2P_MBR_Exploris_YeastHuman 914924 913949 1036739 +121815 +122790 +13.3142% +13.4351%
MacCoss_Eclipse_Normalization_noNorm 2078034 2078036 2346373 +268339 +268337 +12.9131% +12.9130%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2078036 2346373 +268339 +268337 +12.9131% +12.9130%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 348990
KEAP1KO_Eclipse 111504 133619 131359 132031 132031 154703 +43199 +21084 +23344 +22672 +22672 +38.7421% +15.7792% +17.7711% +17.1717% +17.1717%
MTAC_3P_Alternating 108267 117352 114659 114816 114816 137015 +28748 +19663 +22356 +22199 +22199 +26.5529% +16.7556% +19.4978% +19.3344% +19.3344%
MTAC_3P_Standard 110265 118693 115800 116148 116148 138607 +28342 +19914 +22807 +22459 +22459 +25.7035% +16.7777% +19.6952% +19.3365% +19.3365%
MTAC_Yeast_Alternating_3min 48858 49032 48995 48995 59854 +10996 +10822 +10859 +10859 +22.5060% +22.0713% +22.1635% +22.1635%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 55821 66324 +12355 +11249 +10484 +10440 +10503 +22.8928% +20.4249% +18.7751% +18.6816% +18.8155%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 50415 60403 +11782 +10738 +10114 +9943 +9988 +24.2323% +21.6209% +20.1118% +19.7047% +19.8116%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 56827 66681 +11621 +10762 +9974 +9854 +9854 +21.1061% +19.2457% +17.5887% +17.3403% +17.3403%
Olsen_Astral_3P 198770 231103 234505 234149 234149
Olsen_Exploris_3P 51272 58784 55047 58593 58565 75365 +24093 +16581 +20318 +16772 +16800 +46.9906% +28.2067% +36.9103% +28.6246% +28.6861%
SCIEX_3P 82206 93920 87927 87858 87858
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 15707 21801 +7361 +6843 +6552 +6094 +6094 +50.9765% +45.7481% +42.9668% +38.7980% +38.7980%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 15072 20566 +6083 +5501 +5650 +5496 +5494 +42.0010% +36.5151% +37.8788% +36.4698% +36.4517%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 9385 18581 +9841 +9205 +9192 +9217 +9196 +112.5973% +98.1762% +97.9018% +98.4302% +97.9861%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 9810 17662 +8764 +8403 +7878 +7852 +7852 +98.4940% +90.7549% +80.5192% +80.0408% +80.0408%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 34425 45088 +10223 +8791 +10746 +10663 +10663 +29.3217% +24.2196% +31.2911% +30.9746% +30.9746%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 25223 33583 +8934 +8117 +8464 +8360 +8360 +36.2449% +31.8739% +33.6956% +33.1444% +33.1444%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 37459 49330 +12642 +11654 +11681 +11909 +11871 +34.4581% +30.9322% +31.0261% +31.8244% +31.6906%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 39946 50507 +10351 +8962 +10464 +10614 +10561 +25.7770% +21.5718% +26.1319% +26.6062% +26.4382%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 4246 8440 +4774 +4491 +4231 +4194 +4194 +130.2237% +113.7250% +100.5227% +98.7753% +98.7753%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 6067 8635 +3336 +3024 +2780 +2569 +2568 +62.9553% +53.8941% +47.4808% +42.3508% +42.3273%
SCP_Astral_250pg_3ms 675 721 908 879 879
SCP_Astral_250pg_6ms 1436 1738 2145 2163 2165
SCP_Astral_500pg_12ms 7794 7972 8252 8406 8408 13474 +5680 +5502 +5222 +5068 +5066 +72.8766% +69.0166% +63.2816% +60.2903% +60.2521%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 9415 13091 +3933 +3749 +3720 +3677 +3676 +42.9461% +40.1306% +39.6969% +39.0588% +39.0441%
SCP_Astral_500pg_3ms 1846 2600 2586 2589 9181 +7335 +6581 +6595 +6592 +397.3456% +253.1154% +255.0271% +254.6157%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 4804 12172 +8298 +8017 +7398 +7367 +7368 +214.1972% +192.9483% +154.9644% +153.3195% +153.3722%
SCP_Astral_MBR 24110 24991 24570 24544 24527 33248 +9138 +8257 +8678 +8704 +8721 +37.9013% +33.0399% +35.3195% +35.4628% +35.5567%
Seer_Astral_45 69584 90103 87204 87620 87624
Seer_Astral_single 56699 55793 55891 55891 61879 +5180 +6086 +5988 +5988 +9.1360% +10.9082% +10.7137% +10.7137%
YEAST_KO_Astral 66823 87888 87428 86498 86777
EWZ_2P_MBR_Exploris 55271 55147 64509 +9238 +9362 +16.7140% +16.9764%
EWZ_2P_MBR_Exploris_Human 48465 48473 55956 +7491 +7483 +15.4565% +15.4375%
EWZ_2P_MBR_Exploris_YeastHuman 51246 51177 60126 +8880 +8949 +17.3282% +17.4864%
MacCoss_Eclipse_Normalization_noNorm 73278 73277 80559 +7281 +7282 +9.9361% +9.9376%
MacCoss_Eclipse_Normalization_yesNorm 73278 73277 80559 +7281 +7282 +9.9361% +9.9376%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 649383
KEAP1KO_Eclipse 87920 92888 93982 93441 94286 92809 +4889 -79 -1173 -632 -1477 +5.5607% -0.0850% -1.2481% -0.6764% -1.5665%
MTAC_3P_Alternating 63773 63974 63611 63015 65835 69619 +5846 +5645 +6008 +6604 +3784 +9.1669% +8.8239% +9.4449% +10.4800% +5.7477%
MTAC_3P_Standard 64317 64464 64219 63385 65967 70434 +6117 +5970 +6215 +7049 +4467 +9.5107% +9.2610% +9.6778% +11.1209% +6.7716%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12239 13227 +1160 +1257 +1287 +988 +9.6130% +10.5013% +10.7789% +8.0726%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12660 13474 +1042 +1003 +1112 +1146 +814 +8.3816% +8.0427% +8.9953% +9.2959% +6.4297%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12180 13058 +1050 +1011 +1098 +1090 +878 +8.7442% +8.3921% +9.1806% +9.1076% +7.2085%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12774 13543 +982 +1078 +1066 +1133 +769 +7.8178% +8.6482% +8.5437% +9.1297% +6.0200%
Olsen_Astral_3P 236395 245756 242430 240719 247368
Olsen_Exploris_3P 146224 153534 153990 155827 157286 160261 +14037 +6727 +6271 +4434 +2975 +9.5997% +4.3814% +4.0723% +2.8455% +1.8915%
SCIEX_3P 70810 74366 72157 71550 73429
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10022 12364 +3201 +2836 +2779 +3030 +2342 +34.9340% +29.7649% +28.9932% +32.4620% +23.3686%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 9989 12065 +2767 +2304 +2653 +2512 +2076 +29.7591% +23.6041% +28.1874% +26.2954% +20.7829%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 6349 10170 +7720 +4086 +3923 +4054 +3821 +315.1020% +67.1598% +62.7981% +66.2852% +60.1827%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 4949 7044 +2341 +2456 +2086 +2121 +2095 +49.7767% +53.5310% +42.0734% +43.0835% +42.3318%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16536 18191 +2001 +1911 +2166 +2136 +1655 +12.3595% +11.7383% +13.5164% +13.3043% +10.0085%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13984 15698 +2099 +1857 +2010 +2027 +1714 +15.4350% +13.4167% +14.6844% +14.8270% +12.2569%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16458 18793 +2541 +2517 +2676 +2868 +2335 +15.6350% +15.4645% +16.6036% +18.0094% +14.1876%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17349 19509 +2492 +2331 +2596 +2764 +2160 +14.6442% +13.5697% +15.3491% +16.5064% +12.4503%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 3814 6359 +2712 +2446 +2495 +2820 +2545 +74.3625% +62.5096% +64.5704% +79.6835% +66.7278%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5169 6485 +2185 +1882 +1688 +1508 +1316 +50.8140% +40.8864% +35.1887% +30.2994% +25.4595%
SCP_Astral_250pg_3ms 576 22 936 741 736
SCP_Astral_250pg_6ms 637 2080 2029 2046 2068
SCP_Astral_500pg_12ms 6245 6346 6016 6127 6219 8646 +2401 +2300 +2630 +2519 +2427 +38.4468% +36.2433% +43.7168% +41.1131% +39.0256%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7342 8545 +1823 +1816 +1533 +1522 +1203 +27.1199% +26.9877% +21.8625% +21.6717% +16.3852%
SCP_Astral_500pg_3ms 982 2365 2177 2236 5666 +4684 +3301 +3489 +3430 +476.9857% +139.5772% +160.2664% +153.3989%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 4103 7664 +3956 +3657 +3619 +3746 +3561 +106.6882% +91.2653% +89.4685% +95.6100% +86.7902%
SCP_Astral_MBR 20165 20129 20074 19793 19898 22009 +1844 +1880 +1935 +2216 +2111 +9.1446% +9.3398% +9.6393% +11.1959% +10.6091%
Seer_Astral_45 225377 241455 241952 237727 242898
Seer_Astral_single 4685 4700 4632 4739 5086 +401 +386 +454 +347 +8.5592% +8.2128% +9.8014% +7.3222%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1338667
EWZ_2P_MBR_Exploris 245259 247422 255433 +10174 +8011 +4.1483% +3.2378%
EWZ_2P_MBR_Exploris_Human 115447 117345 119040 +3593 +1695 +3.1123% +1.4445%
EWZ_2P_MBR_Exploris_YeastHuman 128968 130706 135820 +6852 +5114 +5.3129% +3.9126%
MacCoss_Eclipse_Normalization_noNorm 178174 183543 195141 +16967 +11598 +9.5227% +6.3190%
MacCoss_Eclipse_Normalization_yesNorm 178174 183543 195141 +16967 +11598 +9.5227% +6.3190%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 26514
KEAP1KO_Eclipse 7845 8175 8155 8203 8249 8548 +703 +373 +393 +345 +299 +8.9611% +4.5627% +4.8191% +4.2058% +3.6247%
MTAC_3P_Alternating 11361 11494 11351 11338 11798 12736 +1375 +1242 +1385 +1398 +938 +12.1028% +10.8056% +12.2016% +12.3302% +7.9505%
MTAC_3P_Standard 11473 11560 11477 11396 11832 12880 +1407 +1320 +1403 +1484 +1048 +12.2636% +11.4187% +12.2244% +13.0221% +8.8573%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4183 4552 +424 +460 +452 +369 +10.2713% +11.2414% +11.0244% +8.8214%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4337 4600 +385 +352 +382 +386 +263 +9.1340% +8.2863% +9.0564% +9.1599% +6.0641%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4185 4477 +402 +343 +387 +380 +292 +9.8650% +8.2970% +9.4621% +9.2751% +6.9773%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4354 4625 +376 +388 +381 +394 +271 +8.8491% +9.1574% +8.9774% +9.3122% +6.2242%
Olsen_Astral_3P 13820 14378 14293 14296 14611
Olsen_Exploris_3P 7255 7582 7340 7479 7537 8189 +934 +607 +849 +710 +652 +12.8739% +8.0058% +11.5668% +9.4932% +8.6507%
SCIEX_3P 8652 9109 8679 8618 8812
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3561 4453 +1208 +1064 +1042 +1135 +892 +37.2265% +31.3957% +30.5482% +34.2074% +25.0491%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3492 4314 +1060 +881 +1023 +880 +822 +32.5753% +25.6627% +31.0848% +25.6261% +23.5395%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 2434 3815 +1365 +1419 +1365 +1418 +1381 +55.7143% +59.2237% +55.7143% +59.1573% +56.7379%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 2583 3741 +1233 +1305 +1107 +1099 +1158 +49.1627% +53.5714% +42.0273% +41.5973% +44.8316%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5654 6350 +771 +694 +846 +804 +696 +13.8197% +12.2702% +15.3706% +14.4969% +12.3099%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4844 5492 +771 +654 +709 +681 +648 +16.3313% +13.5180% +14.8233% +14.1551% +13.3774%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5713 6630 +1019 +975 +1034 +1077 +917 +18.1608% +17.2414% +18.4775% +19.3949% +16.0511%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 5965 6814 +968 +865 +971 +1009 +849 +16.5583% +14.5403% +16.6182% +17.3816% +14.2330%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1359 2390 +1098 +966 +984 +1102 +1031 +84.9845% +67.8371% +69.9858% +85.5590% +75.8646%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1870 2390 +822 +730 +632 +517 +520 +52.4235% +43.9759% +35.9499% +27.6028% +27.8075%
SCP_Astral_250pg_3ms 307 8 350 283 281
SCP_Astral_250pg_6ms 637 756 751 766 767
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2217 3166 +959 +891 +997 +936 +949 +43.4527% +39.1648% +45.9659% +41.9731% +42.8056%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2598 3106 +703 +718 +629 +567 +508 +29.2551% +30.0670% +25.3936% +22.3316% +19.5535%
SCP_Astral_500pg_3ms 525 902 828 835 2215 +1690 +1313 +1387 +1380 +321.9048% +145.5654% +167.5121% +165.2695%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 1468 2870 +1552 +1423 +1384 +1435 +1402 +117.7542% +98.3414% +93.1359% +100% +95.5041%
SCP_Astral_MBR 4708 4720 4712 4715 4716 5378 +670 +658 +666 +663 +662 +14.2311% +13.9407% +14.1341% +14.0615% +14.0373%
Seer_Astral_45 5802 6297 6122 6133 6246
Seer_Astral_single 4685 4700 4632 4739 5086 +401 +386 +454 +347 +8.5592% +8.2128% +9.8014% +7.3222%
YEAST_KO_Astral 4565 4795 4676 4673 4783
EWZ_2P_MBR_Exploris 7041 7106 7539 +498 +433 +7.0729% +6.0934%
EWZ_2P_MBR_Exploris_Human 6167 6284 6475 +308 +191 +4.9943% +3.0395%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6963 7468 +581 +505 +8.4362% +7.2526%
MacCoss_Eclipse_Normalization_noNorm 5804 5955 6418 +614 +463 +10.5789% +7.7750%
MacCoss_Eclipse_Normalization_yesNorm 5804 5955 6418 +614 +463 +10.5789% +7.7750%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 649013
KEAP1KO_Eclipse 94279 92797 -1482
MTAC_3P_Alternating 65832 69604 +3772
MTAC_3P_Standard 65967 70423 +4456
MTAC_Yeast_Alternating_3min 12239 13227 +988
MTAC_Yeast_Alternating_5min 12660 13472 +812
MTAC_Yeast_Standard_3min 12180 13058 +878
MTAC_Yeast_Standard_5min 12772 13538 +766
Olsen_Astral_3P 247364
Olsen_Exploris_3P 157285 160259 +2974
SCIEX_3P 73429
SCP_Astral_1000pg_12ms 10022 12364 +2342
SCP_Astral_1000pg_24ms 9989 12063 +2074
SCP_Astral_1000pg_3ms 6349 10167 +3818
SCP_Astral_1000pg_6ms 4949 7038 +2089
SCP_Astral_10ng_12ms 16536 18191 +1655
SCP_Astral_10ng_24ms 13982 15698 +1716
SCP_Astral_10ng_3ms 16458 18791 +2333
SCP_Astral_10ng_6ms 17349 19507 +2158
SCP_Astral_250pg_12ms 3814 6359 +2545
SCP_Astral_250pg_24ms 5169 6485 +1316
SCP_Astral_250pg_3ms 736
SCP_Astral_250pg_6ms 2066
SCP_Astral_500pg_12ms 6219 8646 +2427
SCP_Astral_500pg_24ms 7342 8544 +1202
SCP_Astral_500pg_3ms 2234 5662 +3428
SCP_Astral_500pg_6ms 4103 7660 +3557
SCP_Astral_MBR 19891 22009 +2118
Seer_Astral_45 242898
Seer_Astral_single 4739 5086 +347
YEAST_KO_Astral 1338667
EWZ_2P_MBR_Exploris 247422 255416 +7994
EWZ_2P_MBR_Exploris_Human 117340 119029 +1689
EWZ_2P_MBR_Exploris_YeastHuman 130702 135813 +5111
MacCoss_Eclipse_Normalization_noNorm 183540 195141 +11601
MacCoss_Eclipse_Normalization_yesNorm 183540 195141 +11601

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0013 -0.0001 -0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 -0.0001 +0.0005 +0.0005
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0008 -0.0001 +0.0004 +0.0000 +0.0009 +0.0007 +0.0007
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0007 -0.0001 +0.0013 -0.0005 +0.0005 +0.0007 +0.0006
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0026 0.0006 +0.0021 +0.0025 +0.0032 +0.0032
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0015 0.0002 +0.0006 +0.0015 +0.0016 +0.0017 +0.0017
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0020 -0.0000 +0.0019 +0.0013 +0.0012 +0.0020 +0.0020
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 0.0012 +0.0023 +0.0032 +0.0037 +0.0038
MacCoss_Eclipse_Normalization_Entrapment 0.0006 0.0006 -0.0000 -0.0006 -0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 0.0010 +0.0012 +0.0007 +0.0021 +0.0005 +0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0012 +0.0010 +0.0017 +0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 0.0025 +0.0079 +0.0058 +0.0057 +0.0071 +0.0071
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0046 0.0011 +0.0041 +0.0059 +0.0041 +0.0050 +0.0057
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0026 0.0030 +0.0033 +0.0042 +0.0066 +0.0056 +0.0056
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0024 0.0013 +0.0035 +0.0029 +0.0037 +0.0037
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 0.0018 +0.0039 +0.0010 +0.0033 +0.0031 +0.0031
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 0.0009 +0.0033 +0.0035 +0.0027 +0.0027 +0.0027
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 0.0001 +0.0009 +0.0000 +0.0022 +0.0013 +0.0013
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 0.0011 +0.0049 +0.0051 +0.0008 +0.0063 +0.0063
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 0.0031 +0.0033 +0.0042 +0.0055 +0.0062 +0.0062
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 0.0033 +0.0102 +0.0033 +0.0033
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0044 0.0028 +0.0079 +0.0055 +0.0078 +0.0073
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0026 0.0034 +0.0056 +0.0044 +0.0062 +0.0060 +0.0060
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 0.0041 +0.0054 +0.0065 +0.0053 +0.0052 +0.0052
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 0.0036 +0.0049 +0.0059 +0.0071 +0.0071
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0015 0.0055 +0.0086 +0.0087 +0.0069 +0.0069
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 0.0014 +0.0040 +0.0034 +0.0028 +0.0036 +0.0036
Seer_Astral_45_Entrapment -0.0023 -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0023

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0027 0.0003 +0.0029 +0.0030
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0014 -0.0015 +0.0014 -0.0001
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0011 -0.0025 -0.0015 -0.0014 -0.0030 -0.0032 -0.0014
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0043 -0.0011 +0.0001 +0.0014 +0.0018 +0.0014 +0.0032
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0044 -0.0011 +0.0054 +0.0041 +0.0036 +0.0032
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0057 -0.0004 +0.0037 +0.0034 +0.0044 +0.0029 +0.0053
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0024 -0.0009 +0.0049 +0.0038 +0.0011 +0.0019 +0.0015
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0054 0.0009 +0.0045 +0.0054 +0.0065 +0.0063
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0031 -0.0043 -0.0041 -0.0013
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0035
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0017 -0.0002 +0.0027 -0.0001 +0.0026 +0.0006 +0.0015
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0029
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0040 -0.0049 +0.0000 -0.0007 -0.0006 -0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0083 0.0016 +0.0086 +0.0074 +0.0086 +0.0086 +0.0099
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0087 -0.0027 +0.0032 +0.0032 +0.0045 +0.0045 +0.0060
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0002 +0.0015 +0.0047 +0.0041 +0.0043 +0.0044
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0060 -0.0020 +0.0035 +0.0020 +0.0034 +0.0041
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0036 -0.0013 +0.0019 +0.0009 +0.0003 +0.0031 +0.0023
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0060 0.0010 +0.0046 +0.0083 +0.0076 +0.0070 +0.0070
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0049 -0.0009 +0.0045 +0.0011 +0.0045 +0.0037 +0.0039
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0061 0.0005 +0.0059 +0.0082 +0.0040 +0.0069 +0.0067
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0042 -0.0010 +0.0032 +0.0032 +0.0016 +0.0003 +0.0032
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0 0.0029 +0.0057 +0.0029 +0.0115 +0.0029 +0.0029
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0088 0.0107 +0.0206 +0.0174 +0.0191 +0.0195 +0.0195
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 -0.0024 0.0014 +0.0050 +0.0054 +0.0000 +0.0035 +0.0039
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0060 -0.0027 -0.0007 -0.0026 +0.0025 +0.0035 +0.0034
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0002 -0.0016 +0.0026 -0.0086 -0.0035 -0.0014 -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 -0.0043 0.0012 +0.0057 +0.0057 +0.0020 +0.0068 +0.0055
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0057 0.0014 +0.0073 +0.0044 +0.0039 +0.0064 +0.0070
Seer_Astral_45_Entrapment -0.0049 -0.0036
Seer_Astral_single_Entrapment -0.0074 -0.0073 0.0022 +0.0096 +0.0095
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0061

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 -0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0013 -0.0008 +0.0004 +0.0004
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 0.0001 +0.0004 +0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0001 0.0000 +0.0002 -0.0002 +0.0002 +0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0003 0.0001 +0.0010 -0.0001 +0.0005 +0.0004 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 0.0003 +0.0013 +0.0016 +0.0018 +0.0018
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0008 0.0005 +0.0009 +0.0013 +0.0015 +0.0014 +0.0014
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0011 0.0002 +0.0010 +0.0009 +0.0010 +0.0012 +0.0012
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 0.0010 +0.0018 +0.0020 +0.0025 +0.0025
MacCoss_Eclipse_Normalization_Entrapment 0.0002 0.0002 0.0003 +0.0001 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 0.0011 +0.0015 +0.0006 +0.0017 +0.0011 +0.0011
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0005 +0.0010 +0.0025 +0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 0.0015 +0.0061 +0.0043 +0.0046 +0.0052 +0.0052
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 -0.0034 0.0007 +0.0027 +0.0036 +0.0033 +0.0033 +0.0041
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0024 0.0023 +0.0022 +0.0029 +0.0051 +0.0047 +0.0047
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0016 0.0005 +0.0021 +0.0015 +0.0021 +0.0021
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 0.0011 +0.0024 +0.0007 +0.0023 +0.0019 +0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 0.0009 +0.0028 +0.0029 +0.0024 +0.0023 +0.0023
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 0.0004 +0.0009 +0.0002 +0.0016 +0.0012 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 0.0013 +0.0043 +0.0039 +0.0015 +0.0044 +0.0044
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 0.0025 +0.0032 +0.0034 +0.0039 +0.0039 +0.0039
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 0.0023 +0.0082 +0.0023 +0.0023
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 0.0030 +0.0067 +0.0051 +0.0060 +0.0060
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0013 0.0027 +0.0046 +0.0031 +0.0047 +0.0041 +0.0041
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 0.0028 +0.0044 +0.0046 +0.0046 +0.0045 +0.0045
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 0.0046 +0.0028 +0.0050 +0.0062 +0.0062
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0010 0.0041 +0.0066 +0.0060 +0.0051 +0.0051
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 0.0015 +0.0033 +0.0030 +0.0023 +0.0028 +0.0028
Seer_Astral_45_Entrapment -0.0011 -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 0.0007 +0.0029 +0.0029
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0005

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0019
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0013 0.0004 +0.0016 +0.0018
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0006 -0.0005 +0.0011 +0.0001
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0006 -0.0008 -0.0007 -0.0006 -0.0011 -0.0010 -0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0024 -0.0003 +0.0006 +0.0011 +0.0018 +0.0016 +0.0021
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0022 -0.0002 +0.0035 +0.0032 +0.0028 +0.0020
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0025 0.0018 +0.0055 +0.0039 +0.0042 +0.0031 +0.0043
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0018 0.0008 +0.0046 +0.0043 +0.0022 +0.0023 +0.0026
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0034 0.0007 +0.0030 +0.0034 +0.0044 +0.0041
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0021 -0.0015 -0.0010 +0.0006
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0013
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0019 -0.0004 +0.0022 -0.0010 +0.0013 +0.0012 +0.0015
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0020
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0039 -0.0032 +0.0005 -0.0009 +0.0001 +0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0060 0.0023 +0.0071 +0.0078 +0.0081 +0.0066 +0.0083
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0064 -0.0029 +0.0015 +0.0004 +0.0011 +0.0002 +0.0035
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0033 0.0003 +0.0028 +0.0038 +0.0043 +0.0043 +0.0036
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0044 -0.0030 +0.0018 +0.0001 +0.0012 +0.0014
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0030 0.0004 +0.0036 +0.0018 +0.0019 +0.0030 +0.0034
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0040 0.0001 +0.0022 +0.0047 +0.0038 +0.0033 +0.0040
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0033 -0.0004 +0.0035 +0.0015 +0.0034 +0.0025 +0.0029
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0044 0.0006 +0.0045 +0.0047 +0.0025 +0.0036 +0.0050
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0029 -0.0015 -0.0002 +0.0017 -0.0012 -0.0014 +0.0014
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0 0.0033 +0.0093 +0.0115 +0.0080 +0.0033 +0.0033
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0048 0.0090 +0.0190 +0.0158 +0.0145 +0.0137 +0.0138
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 -0.0022 0.0029 +0.0069 +0.0064 +0.0036 +0.0056 +0.0051
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0067 -0.0028 -0.0008 -0.0028 +0.0016 +0.0017 +0.0040
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 -0.0002 +0.0030 -0.0069 -0.0030 -0.0005 -0.0005
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 -0.0018 0.0020 +0.0039 +0.0042 +0.0010 +0.0048 +0.0038
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0041 0.0011 +0.0035 +0.0029 +0.0034 +0.0040 +0.0052
Seer_Astral_45_Entrapment -0.0029 -0.0009
Seer_Astral_single_Entrapment -0.0074 -0.0069 0.0023 +0.0097 +0.0091
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0020

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 24588 11599 -12796 -12989

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 762 459 -312 -303

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0.0310 0.0396 +0.0080 +0.0086

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -629 573 -271 +1202

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 56 -64 -254 -120

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 0 +1 +0 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 3 0 +1 +2 +0 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 15 14 +4 +1 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 14 13 +4 +0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 14 +3 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 2 1 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 2 2 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 1 0 +0 +1 +0 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 1 0 +0 +1 -1 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 1 1 +0 +1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 1 0 +0 +0 +0 +1 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1375 0.1753 +0.0294 +0.0333 +0.0353 +0.0380 +0.0378
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1325 0.1682 +0.0289 +0.0319 +0.0330 +0.0358 +0.0357
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1409 0.1777 +0.0322 +0.0353 +0.0370 +0.0368
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1355 0.1645 +0.0114 +0.0235 +0.0269 +0.0289 +0.0290
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1598 0.1835 +0.0137 +0.0196 +0.0220 +0.0236 +0.0237
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1323 0.1608 +0.0105 +0.0242 +0.0271 +0.0286 +0.0285
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.0833
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1506 0.1559 +0.0078 +0.0059 +0.0063 +0.0054 +0.0053
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5869 0.5977 +0.0108 +0.0108
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.1718 0.2127 +0.0410 +0.0409

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0758 0.0869 +0.0106 +0.0130 +0.0142 +0.0149 +0.0111
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0718 0.0841 +0.0117 +0.0138 +0.0141 +0.0152 +0.0123
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0687 0.0782 +0.0109 +0.0122 +0.0124 +0.0095
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0601 0.0686 -0.0092 +0.0083 +0.0093 +0.0098 +0.0084
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0775 0.0828 +0.0036 +0.0072 +0.0075 +0.0056 +0.0053
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0584 0.0661 -0.0109 +0.0094 +0.0093 +0.0093 +0.0078
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0374
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.1033 0.1018 -0.0010 -0.0001 -0.0018 -0.0009 -0.0015
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.0795
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5880 0.5790 -0.0091 -0.0090
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1246 0.1368 +0.0135 +0.0121

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0777 0.0125 -0.0020 +0.0070 +0.0012 +0.0000 -0.0652
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0407 -0.0035 -0.0076 +0.0055 -0.0002 -0.0001 -0.0372
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 0.0009 0.0002 +0.0007 -0.0023 -0.0001 -0.0000 -0.0006
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.1266 -0.0638 +0.0012 -0.0008 +0.0020 -0.0002 -0.0629
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0723 -0.0618 -0.0054 -0.0006 -0.0003 +0.0001 -0.0106
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0289 -0.0544 -0.0080 +0.0050 -0.0016 -0.0001 +0.0255
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 -0.0963 +0.0114 +0.0329 -0.0052 +0.0001
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.2293 +0.0115 +0.0151 +0.0011 +0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 -0.0202 -0.0082 +0.0282 -0.0195 +0.0005
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 -0.0423 +0.0067 +0.0305 +0.0014 +0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3429 +0.0081 +0.0093 -0.0002 +0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.0333 -0.0024 -0.0402 -0.0016 -0.0001
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.0729 +0.0108 -0.0145 +0.0012 -0.0002
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2277 +0.0015 +0.0038 -0.0038 -0.0001
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2019 +0.0262 -0.0191 +0.0011 -0.0004
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.2353 0.1288 -0.0059 -0.0059 +0.0211 -0.0012 -0.1064
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0604 -0.0804 +0.0062 +0.0047 -0.0191 -0.0001 +0.0200
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.2805 0.1964 +0.0183 -0.0240 +0.0287 +0.0020 -0.0841
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.0885 0.1056 +0.0048 -0.0054 -0.0067 +0.0002 +0.0171
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0456 -0.0470 +0.0009 +0.0001 -0.0089 -0.0000 +0.0014
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2040 0.2084 +0.0051 -0.0017 +0.0004 +0.0004 +0.0045
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.0231 0.1345 -0.0032 -0.0062 -0.0160 +0.0006 +0.1114
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.1019 -0.0805 +0.0043 -0.0045 -0.0054 -0.0001 -0.0214
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 -0.0965 0.0453 +0.0169 -0.0238 +0.0355 +0 -0.0511
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0776 +0.0195 +0.0041 +0.0006 +0.0003
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0676 -0.0031 +0.0125 +0.0006 -0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0038 -0.0051 -0.0071 +0.0012 +0.0002
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0425 +0.0119 -0.0026 -0.0002 -0.0000
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0617 -0.0238 +0.0049 +0.0003 -0.0001
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0230 -0.0331 +0.0073 +0.0004 +0.0000
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0086 +0.0109 -0.0100 -0.0011 +0.0003
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.0595 -0.0356 -0.0145 +0.0024 +0.0008
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.0364 -0.0468 -0.0064 -0.0010 -0.0004

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 -0.0739 0.0137 +0.0009 +0.0076 -0.0005 +0.0006 -0.0603
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0422 -0.0030 -0.0089 +0.0045 +0.0004 +0.0011 -0.0392
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 -0.0069 0.0119 +0.0054 -0.0044 +0.0010 +0.0033 +0.0050
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.1211 -0.0606 +0.0013 +0.0005 -0.0055 +0.0004 -0.0605
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0696 -0.0640 -0.0060 -0.0005 -0.0005 -0.0005 -0.0057
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0330 -0.0483 -0.0084 +0.0078 -0.0007 +0.0020 +0.0153
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 -0.0901 +0.0142 +0.0365 -0.0057 -0.0002
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1575 +0.0050 +0.0043 -0.0072 -0.0060
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.0075 -0.0338 -0.0246 +0.0154 -0.0097
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 -0.0523 +0.0064 +0.0290 +0.0021 -0.0001
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3057 +0.0072 +0.0066 -0.0010 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.0286 +0.0002 -0.0402 -0.0012 -0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.0488 +0.0124 -0.0135 -0.0021 -0.0022
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1966 -0.0003 +0.0009 -0.0042 +0.0009
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.1776 +0.0289 -0.0188 +0.0012 -0.0027
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.2207 0.1614 -0.0077 -0.0028 +0.0144 -0.0004 -0.0593
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0500 -0.0758 +0.0048 +0.0016 -0.0170 -0.0057 +0.0259
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2743 0.2446 +0.0504 -0.0481 +0.0073 +0.0089 -0.0298
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0765 0.1048 +0.0031 -0.0032 -0.0081 +0.0006 +0.0283
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0421 -0.0444 +0.0011 -0.0008 -0.0084 -0.0000 +0.0023
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2051 0.2212 +0.0036 -0.0008 +0.0016 +0.0018 +0.0161
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 -0.0116 0.1102 +0.0005 -0.0096 -0.0297 +0.0070 +0.0986
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.1123 -0.0834 +0.0056 -0.0034 -0.0033 +0.0038 -0.0288
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 -0.1449 0.0397 +0.0405 -0.0089 +0.0322 +0.0276 -0.1052
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0675 +0.0258 +0.0029 -0.0003 -0.0025
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0656 -0.0049 +0.0142 +0.0054 -0.0021
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0037 -0.0001 -0.0108 +0.0000 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0406 +0.0137 -0.0048 +0.0001 -0.0001
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0624 -0.0232 +0.0027 +0.0012 -0.0002
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0216 -0.0350 +0.0076 +0.0002 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0132 +0.0131 -0.0109 +0.0003 +0.0016
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.0583 -0.0435 -0.0160 +0.0023 +0.0005
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0451 -0.0508 -0.0078 +0.0009 +0.0008

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.3083 0.1520 +0.0343 +0.0202 -0.0086 +0.0005 -0.1564
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.2103 0.1330 +0.0169 -0.0058 +0.0004 +0.0004 -0.0773
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.2607 0.1469 +0.0117 -0.0078 +0.0011 -0.0001 -0.1138
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.2987 0.1558 +0.0441 -0.0007 -0.0136 +0.0007 -0.1428
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.2200 0.1402 +0.0164 -0.0031 -0.0002 +0.0007 -0.0798
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.2686 0.1435 +0.0170 -0.0063 +0.0017 +0.0006 -0.1251
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.5750 +0.0354 +0.0384 -0.0420 -0.0006
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.3504 +0.0422 -0.0321 -0.0167 +0.0004
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 1.2403 +0.2175 -0.0279 -0.1166 -0.0009
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.2570 +0.0427 +0.0074 -0.0036 +0.0005
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.3361 +0.0473 +0.0030 -0.0078 +0.0005
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.3802 +0.0549 +0.0262 -0.0056 +0.0001
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.3316 +0.0358 +0.0129 -0.0110 +0.0001
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.2865 +0.0274 +0.0045 -0.0018 +0.0011
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.5387 +0.0778 +0.0001 -0.0169 +0.0003
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.5726 0.2155 +0.0445 +0.0761 -0.1281 +0.0017 -0.3571
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.1494 0.0452 -0.0103 +0.0134 -0.0147 -0.0018 -0.1043
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.9455 0.3476 -0.0030 +0.1483 +0.0078 -0.0120 -0.5979
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.3507 0.1861 +0.0037 +0.0045 +0.0051 +0.0002 -0.1646
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.1523 0.0446 +0.0676 -0.0087 -0.0168 +0.0006 -0.1077
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.3354 0.1886 +0.0316 +0.0062 -0.0049 +0.0001 -0.1468
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.5801 0.2525 -0.0093 +0.0378 -0.0706 +0.0033 -0.3276
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.2480 0.0743 +0.0977 -0.0155 +0.0159 +0.0001 -0.1736
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 1.2743 0.5964 +0.0737 +0.1982 -0.0827 -0.0008 -0.6780
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.4826 +0.0321 -0.0450 -0.0051 -0.0001
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.5418 +0.0200 -0.0293 -0.0344 -0.0000
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.1072 +0.0068 -0.0387 -0.0080 +0.0005
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.1517 +0.0190 -0.0584 -0.0028 -0.0002
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.1938 +0.0281 -0.0478 -0.0031 -0.0006
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.1340 +0.0273 -0.0601 -0.0037 +0.0000
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.1860 +0.0130 -0.0614 -0.0008 +0.0011
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.5778 +0.0619 -0.0455 -0.0143 +0.0038
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.4984 +0.0688 -0.0494 -0.0103 +0.0013

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.2223 0.0622 +0.0149 -0.0182 -0.0054 +0.1015 -0.1601
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.1003 0.0378 +0.0035 +0.0005 +0.0043 +0.0189 -0.0626
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.1474 0.0543 -0.0157 -0.0104 +0.0083 +0.0352 -0.0931
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.1907 0.0590 -0.0042 +0.0002 -0.0084 +0.0711 -0.1317
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.1029 0.0412 +0.0032 -0.0030 +0.0035 +0.0313 -0.0617
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.1559 0.0631 +0.0000 +0.0073 -0.0081 +0.0305 -0.0928
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.4072 +0.0402 -0.0136 +0.0467 +0.1416
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.1839 +0.0316 -0.0208 -0.0112 +0.0754
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.9202 +0.1306 -0.0136 -0.0647 +0.5274
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0652 +0.0032 +0.0034 -0.0021 +0.0187
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0763 +0.0110 -0.0047 +0.0013 +0.0138
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0804 +0.0055 -0.0000 +0.0038 +0.0183
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0795 +0.0026 +0.0079 -0.0036 +0.0164
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0563 +0.0015 +0.0006 +0.0010 +0.0050
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.1365 +0.0296 -0.0022 -0.0025 +0.0158
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.3037 0.0475 +0.0146 +0.0452 -0.0355 +0.0761 -0.2562
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0640 0.0179 -0.0057 -0.0062 -0.0031 +0.0154 -0.0461
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.5818 0.0598 -0.1294 +0.1626 +0.0090 +0.0813 -0.5220
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0730 0.0312 -0.0046 +0.0074 +0.0016 +0.0039 -0.0418
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0368 0.0098 +0.0109 -0.0066 +0.0090 -0.0065 -0.0271
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0907 0.0375 -0.0053 +0.0093 +0.0025 +0.0083 -0.0531
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.2490 0.0708 -0.0166 +0.0170 -0.0166 +0.0315 -0.1782
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.1298 0.0213 +0.0068 -0.0006 -0.0039 +0.0560 -0.1084
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.4922 0.1800 -0.0891 -0.0032 -0.0082 +0.0618 -0.3122
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.3152 +0.0682 -0.0593 -0.0056 +0.0928
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.3566 +0.0668 -0.0849 -0.0031 +0.1131
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0592 +0.0113 -0.0357 +0.0198 +0.0064
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0537 -0.0054 -0.0154 +0.0040 +0.0050
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0645 -0.0011 -0.0225 +0.0112 +0.0037
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0477 +0.0094 -0.0181 -0.0013 +0.0020
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0937 -0.0134 -0.0199 -0.0090 +0.0263
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.3243 +0.0271 -0.0671 +0.0055 +0.0651
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.3344 +0.0501 -0.0498 +0.0220 +0.0590

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 173.9100
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 19.0300 22.5400 -1.5300 +5.2200 +2.6700 +5.4100 +3.5100 -6.3565% +30.1386% +13.4373% +31.5820% +18.4446%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 8.1300 10 -2.7500 +0.9300 +1.6400 +0.7100 +1.8700 -21.5686% +10.2536% +19.6172% +7.6426% +23.0012%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 9.7900 9.9900 -2.3200 +1.0300 +0.3300 -0.8200 +0.2000 -18.8465% +11.4955% +3.4161% -7.5856% +2.0429%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.2800 5.3200 +1.0900 +0.9100 +0.3800 +1.0400 +25.7683% +20.6349% +7.6923% +24.2991%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.5600 5.1800 -0.2000 +0.8000 +0.4300 +0.6400 +0.6200 -3.7175% +18.2648% +9.0526% +14.0969% +13.5965%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.2400 5.2700 -0.1600 +1.1300 +0.8300 +0.6100 +1.0300 -2.9466% +27.2947% +18.6937% +13.0901% +24.2925%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.5400 5.1200 -0.4300 +0.7000 +0.5900 +0.6600 +0.5800 -7.7477% +15.8371% +13.0243% +14.7982% +12.7753%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 67.2800
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 17.9000 16.3900 -11.2700 -3.3700 -1.9300 -2.8900 -1.5100 -40.7448% -17.0547% -10.5349% -14.9896% -8.4358%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 26.6900
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.8500 -0.9400 +0.2600 +0.2000 +0.7600 +0.4900 -16.2349% +5.6645% +4.3011% +18.5819% +11.2385%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 5.0100 5.4600 -0.8000 +1.0600 -0.4200 +0.4500 -12.7796% +24.0909% -7.1429% +8.9820%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 3.8300 5.0400 +0.5200 +1.3100 +0.2400 +1.4000 +1.2100 +11.5044% +35.1206% +5.0000% +38.4615% +31.5927%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.7200 4.8700 -0.8700 +1.3600 +0.9500 +1.4300 +1.1500 -15.1568% +38.7464% +24.2347% +41.5698% +30.9140%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 5.4700 6.3000 -0.7700 +0.7700 +0.7900 +0.5600 +0.8300 -10.8911% +13.9241% +14.3376% +9.7561% +15.1737%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.8900 6.1900 -1.4000 +0.4600 +0.0500 +0.6500 +0.3000 -18.4453% +8.0279% +0.8143% +11.7329% +5.0934%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.4200 5.8900 -0.5600 +1.2200 +1.5900 +1.4800 +1.4700 -8.6822% +26.1242% +36.9767% +33.5601% +33.2579%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.9600 6.7700 -0.6100 +1.8400 +2.1400 +1.1500 +1.8100 -8.2656% +37.3225% +46.2203% +20.4626% +36.4919%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 3.5900 4.6100 -0.1300 +0.9500 +1.2200 +1.0200 -2.7426% +25.9563% +35.9882% +28.4123%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.0600 4.8300 -0.4300 +0.9900 +1.0700 +0.7700 -8.1749% +25.7813% +28.4574% +18.9655%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.5500
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 3.5200
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 3.7000 4.5400 -0.7400 +1.0100 +0.9400 +1.0500 +0.8400 -14.0152% +28.6119% +26.1111% +30.0860% +22.7027%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.0300 4.8700 -0.6400 +1.0500 +0.7200 +0.0600 +0.8400 -11.6152% +27.4869% +17.3494% +1.2474% +20.8437%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 3.7700 4.7200 -0.0100 +1.2600 +1.1500 +0.9500 -0.2114% +36.4162% +32.2129% +25.1989%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 3.5000 5.1300 +0.4800 +1.5100 +1.4000 +1.3500 +1.6300 +10.3226% +41.7127% +37.5335% +35.7143% +46.5714%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.2100 8.3500 -0.6900 +1.8000 +2.2500 +1.1400 -7.6327% +27.4809% +36.8852% +15.8114%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 58.8700
Seer_Astral_single 4.4700 4.1400 5.5800 5.2200 5.9300 +1.4600 +1.7900 +0.3500 +0.7100 +32.6622% +43.2367% +6.2724% +13.6015%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 165.6400
EWZ_2P_MBR_Exploris 26.1800 24.2800 26.8000 +0.6200 +2.5200 +2.3682% +10.3789%
EWZ_2P_MBR_Exploris_Human 12.9100 12.4200 14.5900 +1.6800 +2.1700 +13.0132% +17.4718%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 14.4100 15.9300 +3.8700 +1.5200 +32.0896% +10.5482%
MacCoss_Eclipse_Normalization_noNorm 27.5100 28.2800 40.1500 +12.6400 +11.8700 +45.9469% +41.9731%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 28.5000 40.2900 +12.6200 +11.7900 +45.6090% +41.3684%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png