Regression Metrics Report

Versions: v0.6.4, v0.6.7, v0.7.0, v0.7.4, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 5499336 7773512 7737757 6228907 6753587
KEAP1KO_Eclipse 1096494 1307005 1311955 1293541 1280376 1282603 +186109 -24402 -29352 -10938 +2227 +16.9731% -1.8670% -2.2373% -0.8456% +0.1739%
MTAC_3P_Alternating 586322 615762 610710 599881 615142 618114 +31792 +2352 +7404 +18233 +2972 +5.4223% +0.3820% +1.2124% +3.0394% +0.4831%
MTAC_3P_Standard 596590 623022 617574 607435 620630 624236 +27646 +1214 +6662 +16801 +3606 +4.6340% +0.1949% +1.0787% +2.7659% +0.5810%
MTAC_Yeast_Alternating_3min 137548 136839 135560 143617 144114 +6566 +7275 +8554 +497 +4.7736% +5.3165% +6.3101% +0.3461%
MTAC_Yeast_Alternating_5min 155641 156551 156509 155035 161151 161942 +6301 +5391 +5433 +6907 +791 +4.0484% +3.4436% +3.4714% +4.4551% +0.4908%
MTAC_Yeast_Standard_3min 138509 139385 139292 137885 143679 144688 +6179 +5303 +5396 +6803 +1009 +4.4611% +3.8046% +3.8739% +4.9338% +0.7023%
MTAC_Yeast_Standard_5min 158962 158732 159160 157922 162597 163505 +4543 +4773 +4345 +5583 +908 +2.8579% +3.0070% +2.7300% +3.5353% +0.5584%
Olsen_Astral_3P 3282083 3760832 3714135 3638372 3411514
Olsen_Exploris_3P 1022736 1154669 1123873 1184084 1299900 1315502 +292766 +160833 +191629 +131418 +15602 +28.6258% +13.9289% +17.0508% +11.0987% +1.2002%
SCIEX_3P 672242 749525 722698 714454 738192
SCP_Astral_1000pg_12ms 40882 41700 42425 42100 48971 50767 +9885 +9067 +8342 +8667 +1796 +24.1793% +21.7434% +19.6629% +20.5867% +3.6675%
SCP_Astral_1000pg_24ms 41069 42402 42023 41152 47320 48260 +7191 +5858 +6237 +7108 +940 +17.5096% +13.8154% +14.8419% +17.2726% +1.9865%
SCP_Astral_1000pg_3ms 8740 23115 23015 22913 37263 39232 +30492 +16117 +16217 +16319 +1969 +348.8787% +69.7253% +70.4627% +71.2216% +5.2841%
SCP_Astral_1000pg_6ms 16935 17553 18409 18348 26269 26985 +10050 +9432 +8576 +8637 +716 +59.3446% +53.7344% +46.5859% +47.0733% +2.7256%
SCP_Astral_10ng_12ms 99908 102891 98983 98648 108696 110795 +10887 +7904 +11812 +12147 +2099 +10.8970% +7.6819% +11.9334% +12.3135% +1.9311%
SCP_Astral_10ng_24ms 71098 72728 71445 71126 79592 82526 +11428 +9798 +11081 +11400 +2934 +16.0736% +13.4721% +15.5098% +16.0279% +3.6863%
SCP_Astral_10ng_3ms 105704 106497 105622 104434 114911 117360 +11656 +10863 +11738 +12926 +2449 +11.0270% +10.2003% +11.1132% +12.3772% +2.1312%
SCP_Astral_10ng_6ms 115157 117316 114322 113081 120581 123713 +8556 +6397 +9391 +10632 +3132 +7.4299% +5.4528% +8.2145% +9.4021% +2.5974%
SCP_Astral_250pg_12ms 10194 10806 11238 11233 16166 16822 +6628 +6016 +5584 +5589 +656 +65.0186% +55.6728% +49.6886% +49.7552% +4.0579%
SCP_Astral_250pg_24ms 14807 15433 16041 15699 18979 19436 +4629 +4003 +3395 +3737 +457 +31.2622% +25.9379% +21.1645% +23.8041% +2.4079%
SCP_Astral_250pg_3ms 1261 2032 2450 2386 6854 8189 +6928 +6157 +5739 +5803 +1335 +549.4052% +303.0020% +234.2449% +243.2104% +19.4777%
SCP_Astral_250pg_6ms 1436 4783 5690 5731 12756 13743 +12307 +8960 +8053 +8012 +987 +857.0334% +187.3301% +141.5290% +139.8011% +7.7375%
SCP_Astral_500pg_12ms 21710 21895 22580 22463 28476 29684 +7974 +7789 +7104 +7221 +1208 +36.7296% +35.5743% +31.4615% +32.1462% +4.2422%
SCP_Astral_500pg_24ms 25860 26143 26260 25625 28918 29987 +4127 +3844 +3727 +4362 +1069 +15.9590% +14.7037% +14.1927% +17.0224% +3.6967%
SCP_Astral_500pg_3ms 3484 6898 6834 17948 17635 +14151 +10737 +10801 -313 +406.1711% +155.6538% +158.0480% -1.7439%
SCP_Astral_500pg_6ms 10699 11474 12882 12889 24617 25703 +15004 +14229 +12821 +12814 +1086 +140.2374% +124.0108% +99.5265% +99.4181% +4.4116%
SCP_Astral_MBR 92167 93585 91884 90864 103745 106420 +14253 +12835 +14536 +15556 +2675 +15.4643% +13.7148% +15.8199% +17.1201% +2.5784%
Seer_Astral_45 2512737 3124006 3135497 2971207 2983380
Seer_Astral_single 56699 55793 55891 57609 58312 +1613 +2519 +2421 +703 +2.8448% +4.5149% +4.3316% +1.2203%
YEAST_KO_Astral 16088274 20393787 19199790 17613446 17195301
EWZ_2P_MBR_Exploris 1776128 1851731 1854208 +78080 +2477 +4.3961% +0.1338%
EWZ_2P_MBR_Exploris_Human 836809 874152 876133 +39324 +1981 +4.6993% +0.2266%
EWZ_2P_MBR_Exploris_YeastHuman 914924 970392 974884 +59960 +4492 +6.5535% +0.4629%
MacCoss_Eclipse_Normalization_noNorm 2078034 2232646 2232952 +154918 +306 +7.4550% +0.0137%
MacCoss_Eclipse_Normalization_yesNorm 2078034 2232646 2232952 +154918 +306 +7.4550% +0.0137%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 246168 430774 397213 348933 112968
KEAP1KO_Eclipse 111504 133619 131359 132031 144294 146047 +34543 +12428 +14688 +14016 +1753 +30.9792% +9.3011% +11.1816% +10.6157% +1.2149%
MTAC_3P_Alternating 108267 117352 114659 114816 120341 121301 +13034 +3949 +6642 +6485 +960 +12.0388% +3.3651% +5.7928% +5.6482% +0.7977%
MTAC_3P_Standard 110265 118693 115800 116148 121570 122950 +12685 +4257 +7150 +6802 +1380 +11.5041% +3.5866% +6.1744% +5.8563% +1.1351%
MTAC_Yeast_Alternating_3min 48858 49032 48995 53753 54041 +5183 +5009 +5046 +288 +10.6083% +10.2158% +10.2990% +0.5358%
MTAC_Yeast_Alternating_5min 53969 55075 55840 55884 60128 60125 +6156 +5050 +4285 +4241 -3 +11.4065% +9.1693% +7.6737% +7.5889% -0.0050%
MTAC_Yeast_Standard_3min 48621 49665 50289 50460 54718 54937 +6316 +5272 +4648 +4477 +219 +12.9903% +10.6151% +9.2426% +8.8724% +0.4002%
MTAC_Yeast_Standard_5min 55060 55919 56707 56827 60295 60543 +5483 +4624 +3836 +3716 +248 +9.9582% +8.2691% +6.7646% +6.5391% +0.4113%
Olsen_Astral_3P 198770 231103 234505 234149 235433
Olsen_Exploris_3P 51272 58784 55047 58593 69375 71013 +19741 +12229 +15966 +12420 +1638 +38.5025% +20.8033% +29.0043% +21.1971% +2.3611%
SCIEX_3P 82206 93920 87927 87858 99779
SCP_Astral_1000pg_12ms 14440 14958 15249 15707 18353 19086 +4646 +4128 +3837 +3379 +733 +32.1745% +27.5973% +25.1623% +21.5127% +3.9939%
SCP_Astral_1000pg_24ms 14483 15065 14916 15070 17442 18002 +3519 +2937 +3086 +2932 +560 +24.2975% +19.4955% +20.6892% +19.4559% +3.2106%
SCP_Astral_1000pg_3ms 8740 9376 9389 9364 14696 15814 +7074 +6438 +6425 +6450 +1118 +80.9382% +68.6647% +68.4311% +68.8808% +7.6075%
SCP_Astral_1000pg_6ms 8898 9259 9784 9810 14822 15457 +6559 +6198 +5673 +5647 +635 +73.7132% +66.9403% +57.9824% +57.5637% +4.2842%
SCP_Astral_10ng_12ms 34865 36297 34342 34425 38970 40017 +5152 +3720 +5675 +5592 +1047 +14.7770% +10.2488% +16.5250% +16.2440% +2.6867%
SCP_Astral_10ng_24ms 24649 25466 25119 25223 28731 29882 +5233 +4416 +4763 +4659 +1151 +21.2301% +17.3408% +18.9617% +18.4712% +4.0061%
SCP_Astral_10ng_3ms 36688 37676 37649 37421 41845 42741 +6053 +5065 +5092 +5320 +896 +16.4986% +13.4436% +13.5249% +14.2166% +2.1412%
SCP_Astral_10ng_6ms 40156 41545 40043 39893 43129 44314 +4158 +2769 +4271 +4421 +1185 +10.3546% +6.6651% +10.6660% +11.0821% +2.7476%
SCP_Astral_250pg_12ms 3666 3949 4209 4246 6620 6843 +3177 +2894 +2634 +2597 +223 +86.6612% +73.2844% +62.5802% +61.1634% +3.3686%
SCP_Astral_250pg_24ms 5299 5611 5855 6066 7345 7562 +2263 +1951 +1707 +1496 +217 +42.7062% +34.7710% +29.1546% +24.6621% +2.9544%
SCP_Astral_250pg_3ms 675 721 908 879 3123 3812 +3137 +3091 +2904 +2933 +689 +464.7407% +428.7101% +319.8238% +333.6746% +22.0621%
SCP_Astral_250pg_6ms 1436 1738 2145 2163 5260 5781 +4345 +4043 +3636 +3618 +521 +302.5766% +232.6237% +169.5105% +167.2677% +9.9049%
SCP_Astral_500pg_12ms 7794 7972 8252 8406 11013 11549 +3755 +3577 +3297 +3143 +536 +48.1781% +44.8695% +39.9540% +37.3900% +4.8670%
SCP_Astral_500pg_24ms 9158 9342 9371 9414 10816 11245 +2087 +1903 +1874 +1831 +429 +22.7888% +20.3704% +19.9979% +19.4498% +3.9663%
SCP_Astral_500pg_3ms 1846 2600 2586 7614 7518 +5672 +4918 +4932 -96 +307.2589% +189.1538% +190.7193% -1.2608%
SCP_Astral_500pg_6ms 3874 4155 4774 4805 9580 10105 +6231 +5950 +5331 +5300 +525 +160.8415% +143.2010% +111.6674% +110.3018% +5.4802%
SCP_Astral_MBR 24110 24991 24570 24544 27969 28924 +4814 +3933 +4354 +4380 +955 +19.9668% +15.7377% +17.7208% +17.8455% +3.4145%
Seer_Astral_45 69584 90103 87204 87620 87743
Seer_Astral_single 56699 55793 55891 57609 58312 +1613 +2519 +2421 +703 +2.8448% +4.5149% +4.3316% +1.2203%
YEAST_KO_Astral 66823 87888 87428 86498 83586
EWZ_2P_MBR_Exploris 55271 59501 59902 +4631 +401 +8.3787% +0.6739%
EWZ_2P_MBR_Exploris_Human 48465 51922 52036 +3571 +114 +7.3682% +0.2196%
EWZ_2P_MBR_Exploris_YeastHuman 51246 55424 55722 +4476 +298 +8.7343% +0.5377%
MacCoss_Eclipse_Normalization_noNorm 73278 77725 77876 +4598 +151 +6.2747% +0.1943%
MacCoss_Eclipse_Normalization_yesNorm 73278 77725 77876 +4598 +151 +6.2747% +0.1943%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 603278 724941 730564 637465 629055
KEAP1KO_Eclipse 87920 92888 93982 93441 89357 89747 +1827 -3141 -4235 -3694 +390 +2.0780% -3.3815% -4.5062% -3.9533% +0.4365%
MTAC_3P_Alternating 63773 63974 63611 63015 64844 64845 +1072 +871 +1234 +1830 +1 +1.6810% +1.3615% +1.9399% +2.9041% +0.0015%
MTAC_3P_Standard 64317 64464 64219 63385 65538 65603 +1286 +1139 +1384 +2218 +65 +1.9995% +1.7669% +2.1551% +3.4993% +0.0992%
MTAC_Yeast_Alternating_3min 12067 11970 11940 12533 12559 +492 +589 +619 +26 +4.0772% +4.9206% +5.1843% +0.2075%
MTAC_Yeast_Alternating_5min 12432 12471 12362 12328 12755 12788 +356 +317 +426 +460 +33 +2.8636% +2.5419% +3.4460% +3.7313% +0.2587%
MTAC_Yeast_Standard_3min 12008 12047 11960 11968 12466 12477 +469 +430 +517 +509 +11 +3.9057% +3.5694% +4.3227% +4.2530% +0.0882%
MTAC_Yeast_Standard_5min 12561 12465 12477 12410 12914 12837 +276 +372 +360 +427 -77 +2.1973% +2.9844% +2.8853% +3.4408% -0.5963%
Olsen_Astral_3P 236395 245756 242430 240719 237288
Olsen_Exploris_3P 146224 153534 153990 155827 153485 155320 +9096 +1786 +1330 -507 +1835 +6.2206% +1.1633% +0.8637% -0.3254% +1.1956%
SCIEX_3P 70810 74366 72157 71550 73070
SCP_Astral_1000pg_12ms 9163 9528 9585 9334 10459 11060 +1897 +1532 +1475 +1726 +601 +20.7028% +16.0789% +15.3886% +18.4915% +5.7462%
SCP_Astral_1000pg_24ms 9298 9761 9412 9553 10105 10687 +1389 +926 +1275 +1134 +582 +14.9387% +9.4867% +13.5465% +11.8706% +5.7595%
SCP_Astral_1000pg_3ms 2450 6084 6247 6116 8402 8662 +6212 +2578 +2415 +2546 +260 +253.5510% +42.3734% +38.6586% +41.6285% +3.0945%
SCP_Astral_1000pg_6ms 4703 4588 4958 4923 5933 6044 +1341 +1456 +1086 +1121 +111 +28.5137% +31.7350% +21.9040% +22.7707% +1.8709%
SCP_Astral_10ng_12ms 16190 16280 16025 16055 16513 16910 +720 +630 +885 +855 +397 +4.4472% +3.8698% +5.5226% +5.3254% +2.4042%
SCP_Astral_10ng_24ms 13599 13841 13688 13671 13907 14525 +926 +684 +837 +854 +618 +6.8093% +4.9418% +6.1148% +6.2468% +4.4438%
SCP_Astral_10ng_3ms 16252 16276 16117 15925 16678 17042 +790 +766 +925 +1117 +364 +4.8609% +4.7063% +5.7393% +7.0141% +2.1825%
SCP_Astral_10ng_6ms 17017 17178 16913 16745 17394 17568 +551 +390 +655 +823 +174 +3.2379% +2.2703% +3.8728% +4.9149% +1.0003%
SCP_Astral_250pg_12ms 3647 3913 3864 3539 4635 4861 +1214 +948 +997 +1322 +226 +33.2876% +24.2269% +25.8023% +37.3552% +4.8759%
SCP_Astral_250pg_24ms 4300 4603 4797 4977 5301 5331 +1031 +728 +534 +354 +30 +23.9767% +15.8158% +11.1320% +7.1127% +0.5659%
SCP_Astral_250pg_3ms 576 22 936 741 2514 2645 +2069 +2623 +1709 +1904 +131 +359.2014% +11922.7273% +182.5855% +256.9501% +5.2108%
SCP_Astral_250pg_6ms 637 2080 2029 2046 3817 3939 +3302 +1859 +1910 +1893 +122 +518.3673% +89.3750% +94.1350% +92.5220% +3.1962%
SCP_Astral_500pg_12ms 6245 6346 6016 6127 7230 7444 +1199 +1098 +1428 +1317 +214 +19.1994% +17.3022% +23.7367% +21.4950% +2.9599%
SCP_Astral_500pg_24ms 6722 6729 7012 7023 7344 7426 +704 +697 +414 +403 +82 +10.4731% +10.3582% +5.9042% +5.7383% +1.1166%
SCP_Astral_500pg_3ms 982 2365 2177 4911 4634 +3652 +2269 +2457 -277 +371.8941% +95.9408% +112.8617% -5.6404%
SCP_Astral_500pg_6ms 3708 4007 4045 3918 6276 6403 +2695 +2396 +2358 +2485 +127 +72.6807% +59.7954% +58.2942% +63.4252% +2.0236%
SCP_Astral_MBR 20165 20129 20074 19793 19705 20264 +99 +135 +190 +471 +559 +0.4909% +0.6707% +0.9465% +2.3796% +2.8368%
Seer_Astral_45 225377 241455 241952 237727 232215
Seer_Astral_single 4685 4700 4632 4856 4907 +222 +207 +275 +51 +4.7385% +4.4043% +5.9370% +1.0502%
YEAST_KO_Astral 1300836 1388263 1327464 1301700 1335596
EWZ_2P_MBR_Exploris 245259 243268 244714 -545 +1446 -0.2222% +0.5944%
EWZ_2P_MBR_Exploris_Human 115447 114125 114180 -1267 +55 -1.0975% +0.0482%
EWZ_2P_MBR_Exploris_YeastHuman 128968 129916 130271 +1303 +355 +1.0103% +0.2733%
MacCoss_Eclipse_Normalization_noNorm 178174 187201 187650 +9476 +449 +5.3184% +0.2398%
MacCoss_Eclipse_Normalization_yesNorm 178174 187201 187650 +9476 +449 +5.3184% +0.2398%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 21740 28540 27527 26397 6553
KEAP1KO_Eclipse 7845 8175 8155 8203 8208 8250 +405 +75 +95 +47 +42 +5.1625% +0.9174% +1.1649% +0.5730% +0.5117%
MTAC_3P_Alternating 11361 11494 11351 11338 11762 11778 +417 +284 +427 +440 +16 +3.6705% +2.4709% +3.7618% +3.8808% +0.1360%
MTAC_3P_Standard 11473 11560 11477 11396 11950 11970 +497 +410 +493 +574 +20 +4.3319% +3.5467% +4.2955% +5.0369% +0.1674%
MTAC_Yeast_Alternating_3min 4128 4092 4100 4339 4343 +215 +251 +243 +4 +5.2083% +6.1339% +5.9268% +0.0922%
MTAC_Yeast_Alternating_5min 4215 4248 4218 4214 4379 4390 +175 +142 +172 +176 +11 +4.1518% +3.3427% +4.0778% +4.1766% +0.2512%
MTAC_Yeast_Standard_3min 4075 4134 4090 4097 4318 4307 +232 +173 +217 +210 -11 +5.6933% +4.1848% +5.3056% +5.1257% -0.2547%
MTAC_Yeast_Standard_5min 4249 4237 4244 4231 4440 4393 +144 +156 +149 +162 -47 +3.3890% +3.6819% +3.5108% +3.8289% -1.0586%
Olsen_Astral_3P 13820 14378 14293 14296 14375
Olsen_Exploris_3P 7255 7582 7340 7479 7643 7732 +477 +150 +392 +253 +89 +6.5748% +1.9784% +5.3406% +3.3828% +1.1645%
SCIEX_3P 8652 9109 8679 8618 9319
SCP_Astral_1000pg_12ms 3245 3389 3411 3318 3747 3958 +713 +569 +547 +640 +211 +21.9723% +16.7896% +16.0364% +19.2887% +5.6312%
SCP_Astral_1000pg_24ms 3254 3433 3291 3434 3608 3802 +548 +369 +511 +368 +194 +16.8408% +10.7486% +15.5272% +10.7164% +5.3769%
SCP_Astral_1000pg_3ms 2450 2396 2450 2397 3106 3213 +763 +817 +763 +816 +107 +31.1429% +34.0985% +31.1429% +34.0426% +3.4449%
SCP_Astral_1000pg_6ms 2508 2436 2634 2642 3155 3218 +710 +782 +584 +576 +63 +28.3094% +32.1018% +22.1716% +21.8017% +1.9968%
SCP_Astral_10ng_12ms 5579 5656 5504 5546 5701 5855 +276 +199 +351 +309 +154 +4.9471% +3.5184% +6.3772% +5.5716% +2.7013%
SCP_Astral_10ng_24ms 4721 4838 4783 4811 4840 5081 +360 +243 +298 +270 +241 +7.6255% +5.0227% +6.2304% +5.6121% +4.9793%
SCP_Astral_10ng_3ms 5611 5655 5596 5553 5824 5939 +328 +284 +343 +386 +115 +5.8457% +5.0221% +6.1294% +6.9512% +1.9746%
SCP_Astral_10ng_6ms 5846 5949 5843 5805 6035 6093 +247 +144 +250 +288 +58 +4.2251% +2.4206% +4.2786% +4.9612% +0.9611%
SCP_Astral_250pg_12ms 1292 1424 1406 1288 1730 1823 +531 +399 +417 +535 +93 +41.0991% +28.0197% +29.6586% +41.5373% +5.3757%
SCP_Astral_250pg_24ms 1568 1660 1758 1873 1934 1958 +390 +298 +200 +85 +24 +24.8724% +17.9518% +11.3766% +4.5382% +1.2410%
SCP_Astral_250pg_3ms 307 8 350 283 1017 1104 +797 +1096 +754 +821 +87 +259.6091% +13700% +215.4286% +290.1060% +8.5546%
SCP_Astral_250pg_6ms 637 756 751 766 1453 1564 +927 +808 +813 +798 +111 +145.5259% +106.8783% +108.2557% +104.1775% +7.6394%
SCP_Astral_500pg_12ms 2207 2275 2169 2230 2650 2716 +509 +441 +547 +486 +66 +23.0630% +19.3846% +25.2190% +21.7937% +2.4906%
SCP_Astral_500pg_24ms 2403 2388 2477 2539 2637 2703 +300 +315 +226 +164 +66 +12.4844% +13.1910% +9.1239% +6.4592% +2.5028%
SCP_Astral_500pg_3ms 525 902 828 1934 1786 +1261 +884 +958 -148 +240.1905% +98.0044% +115.7005% -7.6525%
SCP_Astral_500pg_6ms 1318 1447 1486 1435 2265 2361 +1043 +914 +875 +926 +96 +79.1351% +63.1652% +58.8829% +64.5296% +4.2384%
SCP_Astral_MBR 4708 4720 4712 4715 4730 4877 +169 +157 +165 +162 +147 +3.5896% +3.3263% +3.5017% +3.4358% +3.1078%
Seer_Astral_45 5802 6297 6122 6133 6072
Seer_Astral_single 4685 4700 4632 4856 4907 +222 +207 +275 +51 +4.7385% +4.4043% +5.9370% +1.0502%
YEAST_KO_Astral 4565 4795 4676 4673 4713
EWZ_2P_MBR_Exploris 7041 6977 7035 -6 +58 -0.0852% +0.8313%
EWZ_2P_MBR_Exploris_Human 6167 6091 6081 -86 -10 -1.3945% -0.1642%
EWZ_2P_MBR_Exploris_YeastHuman 6887 6933 6969 +82 +36 +1.1906% +0.5193%
MacCoss_Eclipse_Normalization_noNorm 5804 6137 6152 +348 +15 +5.9959% +0.2444%
MacCoss_Eclipse_Normalization_yesNorm 5804 6137 6152 +348 +15 +5.9959% +0.2444%

Metric: quantification.protein_groups.total

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 629037
KEAP1KO_Eclipse 89334 89724 +390
MTAC_3P_Alternating 64842 64845 +3
MTAC_3P_Standard 65534 65597 +63
MTAC_Yeast_Alternating_3min 12524 12554 +30
MTAC_Yeast_Alternating_5min 12749 12785 +36
MTAC_Yeast_Standard_3min 12465 12459 -6
MTAC_Yeast_Standard_5min 12908 12827 -81
Olsen_Astral_3P 237264
Olsen_Exploris_3P 153484 155316 +1832
SCIEX_3P 73066
SCP_Astral_1000pg_12ms 10459 11060 +601
SCP_Astral_1000pg_24ms 10105 10687 +582
SCP_Astral_1000pg_3ms 8400 8660 +260
SCP_Astral_1000pg_6ms 5927 6036 +109
SCP_Astral_10ng_12ms 16512 16909 +397
SCP_Astral_10ng_24ms 13907 14525 +618
SCP_Astral_10ng_3ms 16678 17037 +359
SCP_Astral_10ng_6ms 17392 17568 +176
SCP_Astral_250pg_12ms 4635 4861 +226
SCP_Astral_250pg_24ms 5300 5331 +31
SCP_Astral_250pg_3ms 2513 2643 +130
SCP_Astral_250pg_6ms 3817 3939 +122
SCP_Astral_500pg_12ms 7230 7444 +214
SCP_Astral_500pg_24ms 7344 7426 +82
SCP_Astral_500pg_3ms 4909 4631 -278
SCP_Astral_500pg_6ms 6275 6403 +128
SCP_Astral_MBR 19705 20261 +556
Seer_Astral_45 232214
Seer_Astral_single 4856 4907 +51
YEAST_KO_Astral 1335591
EWZ_2P_MBR_Exploris 243258 244698 +1440
EWZ_2P_MBR_Exploris_Human 114117 114173 +56
EWZ_2P_MBR_Exploris_YeastHuman 129914 130269 +355
MacCoss_Eclipse_Normalization_noNorm 187198 187648 +450
MacCoss_Eclipse_Normalization_yesNorm 187198 187648 +450

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0011 -0.0002
EWZ_2P_MBR_Exploris_Entrapment -0.0011 -0.0011 -0.0013 -0.0001 -0.0001
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0004 -0.0009 -0.0002 -0.0004
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0010 -0.0008 -0.0013 -0.0013 -0.0008 -0.0012 -0.0003 -0.0005 +0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0004 -0.0006 -0.0007 -0.0016 -0.0017 -0.0004 -0.0022 -0.0012 -0.0010 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0015 -0.0019 -0.0026 -0.0023 -0.0022 -0.0006 -0.0003 +0.0004 +0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0014 -0.0015 -0.0016 -0.0019 -0.0015 -0.0006 -0.0005 -0.0004 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0014 -0.0012 -0.0020 -0.0027 -0.0018 +0.0001 -0.0005 -0.0006 +0.0002 +0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0013 -0.0014 -0.0004 +0.0005 +0.0010 -0.0001
MacCoss_Eclipse_Normalization_Entrapment 0.0006 -0.0008 -0.0007 -0.0013 +0.0000
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 -0.0004 0.0009 +0.0011 +0.0006 +0.0020 +0.0004 +0.0014
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006 -0.0011
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0023 -0.0013 +0.0010 +0.0017 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0009 -0.0004 +0.0050 +0.0028 +0.0027 +0.0042 +0.0005
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0048 -0.0030 -0.0038 -0.0003 -0.0004 +0.0026 +0.0044 +0.0026 +0.0034 -0.0001
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0036 -0.0026 -0.0020 -0.0021 -0.0019 -0.0010 +0.0014 +0.0005 -0.0002
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0017 -0.0024 -0.0012 -0.0010 +0.0012 +0.0007 +0.0014 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0020 -0.0013 +0.0007 -0.0022 +0.0002 -0.0000 +0.0007
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0011 -0.0008 +0.0016 +0.0018 +0.0010 +0.0009 +0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0013 -0.0013 -0.0005 -0.0014 +0.0009 -0.0001 +0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0005 0.0012 +0.0050 +0.0052 +0.0009 +0.0064 +0.0017
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0028 -0.0010 -0.0008 +0.0002 +0.0014 +0.0021 +0.0018
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0.0023 -0.0017 +0.0052 -0.0017 -0.0041
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 0.0008 -0.0014 +0.0037 +0.0013 +0.0036 -0.0021
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0010 -0.0027 -0.0026 -0.0034 -0.0026 -0.0005 -0.0016 +0.0001 -0.0000 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 0.0004 -0.0001 +0.0011 +0.0023 +0.0011 +0.0010 -0.0005
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0004 0.0015 +0.0028 +0.0038 +0.0050 +0.0019
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0033 -0.0015 -0.0016 0.0006 +0.0037 +0.0038 +0.0021 +0.0021
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0031 -0.0020 +0.0006 -0.0001 -0.0006 +0.0002 +0.0011
Seer_Astral_45_Entrapment -0.0023 -0.0012
Seer_Astral_single_Entrapment -0.0022 0.0002 -0.0001 +0.0021 -0.0003
YEAST_KO_Astral_Entrapment -0.0024 -0.0019 -0.0026 -0.0025 -0.0031

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0024 -0.0029
EWZ_2P_MBR_Exploris_Entrapment -0.0026 -0.0025 -0.0013 +0.0013 +0.0012
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0052 -0.0039 -0.0009 +0.0013
MTAC_3P_Alternating_Entrapment -0.0010 -0.0011 0.0005 0.0007 -0.0037 -0.0038 -0.0028 -0.0028 -0.0044 -0.0046 -0.0002
MTAC_3P_Standard_Entrapment -0.0013 -0.0025 -0.0029 -0.0026 -0.0044 -0.0033 -0.0021 -0.0008 -0.0004 -0.0008 +0.0011
MTAC_Yeast_Alternating_3min_Entrapment -0.0066 -0.0053 -0.0048 -0.0031 -0.0026 +0.0040 +0.0027 +0.0022 +0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0048 -0.0034 -0.0014 -0.0021 +0.0021 +0.0018 +0.0028 +0.0013 -0.0007
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0047 -0.0020 -0.0028 -0.0052 -0.0060 -0.0002 -0.0012 -0.0040 -0.0032 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0049 -0.0041 -0.0005 +0.0004 +0.0015 +0.0007
MacCoss_Eclipse_Normalization_Entrapment -0.0003 -0.0048 -0.0057 -0.0055 -0.0010
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038 -0.0033
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 -0.0005 -0.0008 +0.0021 -0.0006 +0.0020 +0.0001 -0.0003
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034 -0.0042
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0039 -0.0032 +0.0017 +0.0009 +0.0010 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0016 -0.0015 +0.0055 +0.0044 +0.0055 +0.0056 +0.0001
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0059 -0.0072 -0.0072 -0.0021 -0.0014 +0.0045 +0.0045 +0.0058 +0.0058 +0.0008
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0043 -0.0045 -0.0046 -0.0028 -0.0010 +0.0021 +0.0015 +0.0017 +0.0018
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0040 -0.0054 -0.0057 -0.0045 +0.0009 -0.0005 +0.0009 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0056 -0.0030 +0.0003 -0.0007 -0.0013 +0.0015 +0.0026
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0037 -0.0041 -0.0004 +0.0033 +0.0026 +0.0020 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0045 -0.0034 +0.0020 -0.0014 +0.0020 +0.0012 +0.0011
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0055 -0.0018 +0.0036 +0.0059 +0.0017 +0.0046 +0.0038
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 0.0006 -0.0012 +0.0030 +0.0030 +0.0014 +0.0001 -0.0018
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 -0.0085 0 0.0028 -0.0034 -0.0007 -0.0034 +0.0051 -0.0034 -0.0062
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0084 -0.0088 -0.0009 0.0000 +0.0099 +0.0067 +0.0084 +0.0088 +0.0009
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0040 0.0014 -0.0020 0.0000 -0.0026 +0.0010 +0.0014 -0.0040 -0.0005 -0.0026
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0027 -0.0013 +0.0007 -0.0012 +0.0038 +0.0049 +0.0014
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 0.0019 0.0027 +0.0069 -0.0044 +0.0007 +0.0028 +0.0007
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0008 -0.0056 0.0011 0.0023 +0.0068 +0.0068 +0.0031 +0.0079 +0.0012
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0047 -0.0011 +0.0048 +0.0019 +0.0014 +0.0039 +0.0036
Seer_Astral_45_Entrapment -0.0049 -0.0040
Seer_Astral_single_Entrapment -0.0074 -0.0000 -0.0004 +0.0070 -0.0004
YEAST_KO_Astral_Entrapment -0.0065 -0.0055 -0.0034 -0.0047 -0.0060

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0002 0.0003
EWZ_2P_MBR_Exploris_Entrapment -0.0013 -0.0006 -0.0007 +0.0005 -0.0002
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0004 -0.0006 -0.0003 -0.0002
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 -0.0002 -0.0001 -0.0007 -0.0006 -0.0005 -0.0009 -0.0004 -0.0005 +0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0002 -0.0004 -0.0003 -0.0006 -0.0008 +0.0001 -0.0010 -0.0005 -0.0005 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0010 -0.0013 -0.0014 -0.0014 -0.0013 -0.0003 -0.0000 +0.0001 +0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0010 -0.0008 -0.0011 -0.0012 -0.0008 -0.0004 -0.0002 -0.0003 -0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0008 -0.0011 -0.0016 -0.0011 -0.0003 -0.0004 -0.0004 -0.0001 +0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0011 -0.0009 -0.0001 +0.0001 +0.0006 +0.0002
MacCoss_Eclipse_Normalization_Entrapment 0.0002 -0.0003 -0.0002 -0.0004 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008 -0.0007
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 0.0002 0.0007 +0.0011 +0.0002 +0.0013 +0.0007 +0.0005
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004 -0.0007
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0015 -0.0008 +0.0007 +0.0021 +0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0006 -0.0000 +0.0045 +0.0028 +0.0030 +0.0037 +0.0006
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0029 -0.0026 -0.0026 0.0002 0.0001 +0.0021 +0.0030 +0.0027 +0.0027 -0.0002
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0028 -0.0024 -0.0019 -0.0011 -0.0013 -0.0006 +0.0016 +0.0013 +0.0008
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0010 -0.0016 -0.0006 -0.0005 +0.0011 +0.0005 +0.0010 +0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0016 -0.0005 +0.0009 -0.0008 +0.0008 +0.0004 +0.0012
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0008 -0.0009 +0.0010 +0.0011 +0.0006 +0.0005 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0011 -0.0012 -0.0007 -0.0014 -0.0000 -0.0004 -0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 0.0004 0.0008 +0.0038 +0.0035 +0.0011 +0.0039 +0.0004
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0016 -0.0006 +0.0001 +0.0002 +0.0007 +0.0008 +0.0010
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0.0014 -0.0007 +0.0052 -0.0007 -0.0022
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 0.0002 -0.0005 +0.0032 +0.0016 +0.0025 -0.0007
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0004 -0.0020 -0.0013 -0.0012 -0.0006 +0.0013 -0.0002 +0.0014 +0.0008 +0.0007
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 0.0001 -0.0000 +0.0015 +0.0017 +0.0017 +0.0016 -0.0001
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 0.0010 0.0014 -0.0004 +0.0018 +0.0030 +0.0004
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0019 -0.0010 -0.0007 0.0007 +0.0032 +0.0026 +0.0017 +0.0013
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0016 -0.0007 +0.0010 +0.0008 +0.0001 +0.0006 +0.0009
Seer_Astral_45_Entrapment -0.0011 -0.0005
Seer_Astral_single_Entrapment -0.0022 0.0002 -0.0001 +0.0021 -0.0003
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0007 -0.0007 -0.0015

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
APMS_Astral_Entrapment -0.0008 -0.0011
EWZ_2P_MBR_Exploris_Entrapment -0.0012 -0.0014 -0.0009 +0.0003 +0.0006
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0031 -0.0020 -0.0004 +0.0011
MTAC_3P_Alternating_Entrapment -0.0001 -0.0002 0.0003 0.0002 -0.0024 -0.0020 -0.0019 -0.0017 -0.0023 -0.0022 +0.0004
MTAC_3P_Standard_Entrapment -0.0008 -0.0014 -0.0021 -0.0018 -0.0025 -0.0014 -0.0006 -0.0001 +0.0006 +0.0004 +0.0011
MTAC_Yeast_Alternating_3min_Entrapment -0.0036 -0.0034 -0.0030 -0.0011 -0.0006 +0.0030 +0.0028 +0.0024 +0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0025 -0.0013 -0.0002 -0.0006 +0.0032 +0.0016 +0.0019 +0.0008 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0035 -0.0014 -0.0016 -0.0022 -0.0029 +0.0009 +0.0006 -0.0015 -0.0013 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0030 -0.0014 +0.0009 +0.0013 +0.0024 +0.0016
MacCoss_Eclipse_Normalization_Entrapment -0.0005 -0.0027 -0.0028 -0.0023 -0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024 -0.0019
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0012 -0.0007 +0.0020 -0.0013 +0.0010 +0.0009 +0.0005
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028 -0.0018
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0029 -0.0016 +0.0021 +0.0007 +0.0017 +0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0013 -0.0001 +0.0048 +0.0054 +0.0057 +0.0042 +0.0012
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0033 -0.0041 -0.0031 -0.0013 -0.0006 +0.0038 +0.0027 +0.0034 +0.0025 +0.0007
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0040 -0.0040 -0.0047 -0.0032 -0.0007 +0.0003 +0.0008 +0.0008 +0.0015
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0031 -0.0042 -0.0034 -0.0040 +0.0008 -0.0009 +0.0002 -0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0038 -0.0029 +0.0003 -0.0016 -0.0015 -0.0004 +0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0026 -0.0033 -0.0012 +0.0013 +0.0004 -0.0001 -0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0034 -0.0029 +0.0010 -0.0010 +0.0009 +0.0000 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0023 0.0004 +0.0043 +0.0045 +0.0024 +0.0035 +0.0027
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0000 -0.0019 -0.0006 +0.0013 -0.0016 -0.0019 -0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0047 0 0.0030 -0.0021 +0.0040 +0.0061 +0.0026 -0.0021 -0.0051
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0055 -0.0047 -0.0018 -0.0006 +0.0094 +0.0062 +0.0049 +0.0041 +0.0012
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0035 -0.0007 -0.0028 0.0005 -0.0003 +0.0037 +0.0032 +0.0004 +0.0024 -0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0021 -0.0008 +0.0011 -0.0008 +0.0035 +0.0037 +0.0013
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 -0.0003 0.0027 +0.0059 -0.0040 -0.0002 +0.0023 +0.0029
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 0.0009 -0.0028 0.0006 0.0024 +0.0044 +0.0046 +0.0015 +0.0052 +0.0018
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0028 -0.0012 +0.0011 +0.0005 +0.0010 +0.0016 +0.0016
Seer_Astral_45_Entrapment -0.0029 -0.0003
Seer_Astral_single_Entrapment -0.0074 0.0001 -0.0004 +0.0070 -0.0005
YEAST_KO_Astral_Entrapment -0.0041 -0.0030 -0.0016 -0.0021 -0.0026

Metric: ftr.precursors.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 24395 7187 3191 -21204 -3996

Metric: ftr.precursors.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 771 -74 58 -713 +132

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0316 0 0.0182 -0.0134 +0.0182

Metric: ftr.protein_groups.additional_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 844 -773 263 -581 +1036

Metric: ftr.protein_groups.additional_yeast_IDs

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 190 -87 -29 -219 +58

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
EWZ_2P_MBR_Exploris 0.2251 0 0 -0.2251 +0

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 0 0 +1 +0 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 1 3 3 0 0 +1 +2 +0 -3 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 14 15 12 14 +4 +1 +1 -3 +2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 11 12 +4 +0 +1 -3 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 14 14 11 +3 +0 +1 +0 -3
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 2 2 0 0 +0 +1 +0 -2 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 2 2 1 1 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 1 0 0 0 +0 +1 -1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 1 1 0 0 +0 +1 +0 -1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1421 0.1400 0.1374 0.1635 0.1638 +0.0179 +0.0217 +0.0237 +0.0264 +0.0003
MTAC_3P_Standard 0.1393 0.1362 0.1351 0.1324 0.1547 0.1548 +0.0155 +0.0185 +0.0196 +0.0224 +0.0000
MTAC_Yeast_Alternating_3min 0.1456 0.1424 0.1408 0.1587 0.1584 +0.0129 +0.0160 +0.0176 -0.0003
MTAC_Yeast_Alternating_5min 0.1531 0.1409 0.1376 0.1356 0.1448 0.1469 -0.0061 +0.0060 +0.0093 +0.0113 +0.0021
MTAC_Yeast_Standard_3min 0.1698 0.1639 0.1616 0.1599 0.1668 0.1671 -0.0027 +0.0032 +0.0055 +0.0072 +0.0003
MTAC_Yeast_Standard_5min 0.1503 0.1366 0.1337 0.1323 0.1444 0.1453 -0.0050 +0.0087 +0.0116 +0.0130 +0.0009
Olsen_Astral_3P 0.0823 0.0884 0.0854 0.0832 0.1073
Olsen_Exploris_3P 0.1480 0.1499 0.1495 0.1505 0.1527 0.1531 +0.0051 +0.0031 +0.0035 +0.0026 +0.0003
SCIEX_3P 0.1284 0.1282 0.1196 0.1184 0.1535
MacCoss_Eclipse_Normalization_noNorm 0.5869 0.5931 0.5935 +0.0066 +0.0003
MacCoss_Eclipse_Normalization_yesNorm 0.1717 0.2008 0.2004 +0.0288 -0.0004

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0739 0.0727 0.0720 0.0842 0.0836 +0.0073 +0.0097 +0.0109 +0.0116 -0.0006
MTAC_3P_Standard 0.0723 0.0703 0.0700 0.0688 0.0800 0.0804 +0.0081 +0.0102 +0.0105 +0.0116 +0.0004
MTAC_Yeast_Alternating_3min 0.0673 0.0660 0.0658 0.0738 0.0743 +0.0070 +0.0082 +0.0084 +0.0004
MTAC_Yeast_Alternating_5min 0.0778 0.0603 0.0593 0.0588 0.0633 0.0649 -0.0129 +0.0046 +0.0056 +0.0060 +0.0016
MTAC_Yeast_Standard_3min 0.0792 0.0756 0.0753 0.0772 0.0790 0.0785 -0.0008 +0.0028 +0.0031 +0.0012 -0.0006
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0569 0.0568 0.0623 0.0631 -0.0140 +0.0064 +0.0062 +0.0063 +0.0008
Olsen_Astral_3P 0.0374 0.0373 0.0367 0.0363 0.0471
Olsen_Exploris_3P 0.1028 0.1019 0.1036 0.1027 0.0981 0.0986 -0.0042 -0.0033 -0.0050 -0.0041 +0.0005
SCIEX_3P 0.0864 0.0832 0.0787 0.0785 0.1012
MacCoss_Eclipse_Normalization_noNorm 0.5881 0.5814 0.5813 -0.0068 -0.0001
MacCoss_Eclipse_Normalization_yesNorm 0.1233 0.1355 0.1342 +0.0109 -0.0012

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0694 -0.0765 -0.0777 -0.0048 -0.0041 -0.0020 +0.0070 +0.0012 -0.0729 -0.0006
MTAC_3P_Alternating human A vs B -0.0432 -0.0356 -0.0411 -0.0409 -0.0157 -0.0155 -0.0076 +0.0055 -0.0002 -0.0252 -0.0002
MTAC_3P_Alternating yeast A vs B -0.0026 0.0033 -0.0010 0.0009 -0.0088 -0.0087 +0.0007 -0.0023 -0.0001 +0.0079 -0.0001
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1257 -0.1249 -0.1269 -0.0711 -0.0750 +0.0012 -0.0008 +0.0020 -0.0557 +0.0039
MTAC_3P_Standard human A vs B -0.0785 -0.0731 -0.0725 -0.0722 -0.0702 -0.0712 -0.0054 -0.0006 -0.0003 -0.0020 +0.0010
MTAC_3P_Standard yeast A vs B -0.0337 -0.0257 -0.0306 -0.0291 -0.0567 -0.0575 -0.0080 +0.0050 -0.0016 +0.0276 +0.0008
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.1013 -0.0961 0.0501 +0.0114 +0.0329 -0.0052 -0.0460
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2128 -0.2280 -0.2291 -0.1850 +0.0115 +0.0151 +0.0011 -0.0441
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0111 -0.0392 -0.0197 0.1785 -0.0082 +0.0282 -0.0195 +0.1588
Olsen_Astral_3P human B vs A -0.0036 -0.0103 -0.0408 -0.0422 0.0325 +0.0067 +0.0305 +0.0014 -0.0098
Olsen_Astral_3P human D vs C -0.3258 -0.3338 -0.3431 -0.3429 -0.3275 +0.0081 +0.0093 -0.0002 -0.0154
Olsen_Astral_3P human F vs E 0.0777 0.0753 0.0351 0.0335 0.1239 -0.0024 -0.0402 -0.0016 +0.0904
Olsen_Astral_3P yeast B vs A 0.0756 0.0864 0.0719 0.0731 0.1212 +0.0108 -0.0145 +0.0012 +0.0482
Olsen_Astral_3P yeast D vs C -0.2263 -0.2278 -0.2316 -0.2278 -0.2179 +0.0015 +0.0038 -0.0038 -0.0099
Olsen_Astral_3P yeast F vs E 0.1940 0.2203 0.2012 0.2023 0.2375 +0.0262 -0.0191 +0.0011 +0.0352
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2213 0.2154 0.2365 0.1296 0.1284 -0.0059 -0.0059 +0.0211 -0.1069 -0.0012
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0749 -0.0796 -0.0605 -0.0852 -0.0842 +0.0062 +0.0047 -0.0191 +0.0246 -0.0009
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2739 0.2498 0.2785 0.1890 0.1949 +0.0183 -0.0240 +0.0287 -0.0895 +0.0059
Olsen_Exploris_3P human B vs A 0.0955 0.1003 0.0949 0.0883 0.1037 0.1051 +0.0048 -0.0054 -0.0067 +0.0155 +0.0014
Olsen_Exploris_3P human D vs C -0.0535 -0.0544 -0.0545 -0.0456 -0.0479 -0.0481 +0.0009 +0.0001 -0.0089 +0.0023 +0.0003
Olsen_Exploris_3P human F vs E 0.1998 0.2049 0.2032 0.2036 0.2154 0.2149 +0.0051 -0.0017 +0.0004 +0.0118 -0.0005
Olsen_Exploris_3P yeast B vs A 0.0478 0.0446 0.0384 0.0225 0.1452 0.1471 -0.0032 -0.0062 -0.0160 +0.1227 +0.0019
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1074 -0.1020 -0.0776 -0.0788 +0.0043 -0.0045 -0.0054 -0.0244 +0.0012
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0848 -0.0610 -0.0965 0.0474 0.0473 +0.0169 -0.0238 +0.0355 -0.0491 -0.0001
SCIEX_3P ecoli B vs A -0.0531 -0.0727 -0.0768 -0.0773 -0.0369 +0.0195 +0.0041 +0.0006 -0.0404
SCIEX_3P ecoli C vs A -0.0580 -0.0550 -0.0675 -0.0681 -0.0089 -0.0031 +0.0125 +0.0006 -0.0591
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0024 0.0036 0.0319 -0.0051 -0.0071 +0.0012 +0.0282
SCIEX_3P human B vs A -0.0334 -0.0453 -0.0427 -0.0425 -0.0767 +0.0119 -0.0026 -0.0002 +0.0343
SCIEX_3P human C vs A -0.0804 -0.0567 -0.0616 -0.0618 -0.0862 -0.0238 +0.0049 +0.0003 +0.0243
SCIEX_3P human C vs B -0.0484 -0.0153 -0.0226 -0.0230 -0.0159 -0.0331 +0.0073 +0.0004 -0.0071
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0094 -0.0084 -0.0637 +0.0109 -0.0100 -0.0011 +0.0554
SCIEX_3P yeast C vs A -0.1064 -0.0708 -0.0563 -0.0587 -0.1527 -0.0356 -0.0145 +0.0024 +0.0939
SCIEX_3P yeast C vs B -0.0912 -0.0443 -0.0379 -0.0368 -0.1029 -0.0468 -0.0064 -0.0010 +0.0661

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0663 -0.0738 -0.0733 0.0057 0.0065 +0.0009 +0.0076 -0.0005 -0.0677 +0.0009
MTAC_3P_Alternating human A vs B -0.0451 -0.0362 -0.0407 -0.0411 -0.0145 -0.0153 -0.0089 +0.0045 +0.0004 -0.0266 +0.0008
MTAC_3P_Alternating yeast A vs B 0.0016 0.0070 -0.0025 -0.0036 0.0012 0.0027 +0.0054 -0.0044 +0.0010 -0.0024 +0.0014
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1257 -0.1262 -0.1206 -0.0688 -0.0742 +0.0013 +0.0005 -0.0055 -0.0519 +0.0054
MTAC_3P_Standard human A vs B -0.0772 -0.0711 -0.0706 -0.0701 -0.0685 -0.0698 -0.0060 -0.0005 -0.0005 -0.0016 +0.0013
MTAC_3P_Standard yeast A vs B -0.0322 -0.0239 -0.0317 -0.0310 -0.0549 -0.0534 -0.0084 +0.0078 -0.0007 +0.0239 -0.0015
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0595 -0.0960 -0.0903 0.0530 +0.0142 +0.0365 -0.0057 -0.0373
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1664 -0.1707 -0.1634 -0.1343 +0.0050 +0.0043 -0.0072 -0.0291
Olsen_Astral_3P ecoli F vs E 0.0601 0.0263 -0.0017 0.0172 0.1899 -0.0338 -0.0246 +0.0154 +0.1727
Olsen_Astral_3P human B vs A -0.0149 -0.0213 -0.0503 -0.0525 0.0264 +0.0064 +0.0290 +0.0021 -0.0260
Olsen_Astral_3P human D vs C -0.2928 -0.3000 -0.3066 -0.3056 -0.3020 +0.0072 +0.0066 -0.0010 -0.0036
Olsen_Astral_3P human F vs E 0.0700 0.0702 0.0300 0.0288 0.1151 +0.0002 -0.0402 -0.0012 +0.0863
Olsen_Astral_3P yeast B vs A 0.0543 0.0667 0.0532 0.0510 0.1056 +0.0124 -0.0135 -0.0021 +0.0545
Olsen_Astral_3P yeast D vs C -0.1994 -0.1991 -0.2000 -0.1957 -0.1973 -0.0003 +0.0009 -0.0042 +0.0016
Olsen_Astral_3P yeast F vs E 0.1690 0.1979 0.1791 0.1803 0.2017 +0.0289 -0.0188 +0.0012 +0.0214
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2094 0.2067 0.2211 0.1515 0.1574 -0.0077 -0.0028 +0.0144 -0.0696 +0.0058
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0711 -0.0727 -0.0557 -0.0802 -0.0786 +0.0048 +0.0016 -0.0170 +0.0245 -0.0016
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3062 0.2582 0.2654 0.2273 0.2328 +0.0504 -0.0481 +0.0073 -0.0382 +0.0055
Olsen_Exploris_3P human B vs A 0.0841 0.0872 0.0840 0.0759 0.0990 0.1010 +0.0031 -0.0032 -0.0081 +0.0231 +0.0020
Olsen_Exploris_3P human D vs C -0.0502 -0.0513 -0.0505 -0.0421 -0.0445 -0.0448 +0.0011 -0.0008 -0.0084 +0.0024 +0.0004
Olsen_Exploris_3P human F vs E 0.1988 0.2024 0.2017 0.2033 0.2248 0.2245 +0.0036 -0.0008 +0.0016 +0.0215 -0.0003
Olsen_Exploris_3P yeast B vs A 0.0433 0.0439 0.0342 0.0046 0.1381 0.1286 +0.0005 -0.0096 -0.0297 +0.1335 -0.0095
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1151 -0.1117 -0.1085 -0.0768 -0.0800 +0.0056 -0.0034 -0.0033 -0.0316 +0.0032
Olsen_Exploris_3P yeast F vs E -0.0534 -0.0939 -0.0850 -0.1172 0.0694 0.0600 +0.0405 -0.0089 +0.0322 -0.0478 -0.0094
SCIEX_3P ecoli B vs A -0.0415 -0.0673 -0.0702 -0.0700 -0.0488 +0.0258 +0.0029 -0.0003 -0.0212
SCIEX_3P ecoli C vs A -0.0531 -0.0481 -0.0623 -0.0677 -0.0159 -0.0049 +0.0142 +0.0054 -0.0518
SCIEX_3P ecoli C vs B -0.0149 0.0149 0.0041 0.0041 0.0264 -0.0001 -0.0108 +0.0000 +0.0223
SCIEX_3P human B vs A -0.0318 -0.0455 -0.0407 -0.0408 -0.0812 +0.0137 -0.0048 +0.0001 +0.0404
SCIEX_3P human C vs A -0.0819 -0.0587 -0.0614 -0.0626 -0.0978 -0.0232 +0.0027 +0.0012 +0.0353
SCIEX_3P human C vs B -0.0489 -0.0139 -0.0215 -0.0217 -0.0179 -0.0350 +0.0076 +0.0002 -0.0038
SCIEX_3P yeast B vs A -0.0091 -0.0222 -0.0113 -0.0116 -0.0646 +0.0131 -0.0109 +0.0003 +0.0530
SCIEX_3P yeast C vs A -0.1151 -0.0716 -0.0556 -0.0578 -0.1566 -0.0435 -0.0160 +0.0023 +0.0987
SCIEX_3P yeast C vs B -0.1020 -0.0512 -0.0434 -0.0443 -0.0926 -0.0508 -0.0078 +0.0009 +0.0483

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2962 0.3164 0.3078 0.1215 0.1275 +0.0343 +0.0202 -0.0086 -0.1863 +0.0060
MTAC_3P_Alternating human A vs B 0.1984 0.2153 0.2095 0.2099 0.1111 0.1106 +0.0169 -0.0058 +0.0004 -0.0988 -0.0004
MTAC_3P_Alternating yeast A vs B 0.2558 0.2675 0.2598 0.2608 0.1123 0.1131 +0.0117 -0.0078 +0.0011 -0.1485 +0.0009
MTAC_3P_Standard ecoli A vs B 0.2681 0.3123 0.3116 0.2980 0.1322 0.1350 +0.0441 -0.0007 -0.0136 -0.1658 +0.0029
MTAC_3P_Standard human A vs B 0.2062 0.2226 0.2195 0.2193 0.1246 0.1232 +0.0164 -0.0031 -0.0002 -0.0947 -0.0014
MTAC_3P_Standard yeast A vs B 0.2555 0.2725 0.2662 0.2680 0.1240 0.1261 +0.0170 -0.0063 +0.0017 -0.1440 +0.0021
Olsen_Astral_3P ecoli B vs A 0.5438 0.5792 0.6177 0.5756 0.1660 +0.0354 +0.0384 -0.0420 -0.4097
Olsen_Astral_3P ecoli D vs C 0.3566 0.3988 0.3667 0.3500 0.2094 +0.0422 -0.0321 -0.0167 -0.1407
Olsen_Astral_3P ecoli F vs E 1.1682 1.3857 1.3577 1.2411 0.3789 +0.2175 -0.0279 -0.1166 -0.8622
Olsen_Astral_3P human B vs A 0.2100 0.2526 0.2600 0.2564 0.1382 +0.0427 +0.0074 -0.0036 -0.1182
Olsen_Astral_3P human D vs C 0.2930 0.3403 0.3434 0.3356 0.2264 +0.0473 +0.0030 -0.0078 -0.1092
Olsen_Astral_3P human F vs E 0.3046 0.3595 0.3858 0.3801 0.1766 +0.0549 +0.0262 -0.0056 -0.2035
Olsen_Astral_3P yeast B vs A 0.2937 0.3296 0.3425 0.3315 0.1403 +0.0358 +0.0129 -0.0110 -0.1912
Olsen_Astral_3P yeast D vs C 0.2553 0.2827 0.2872 0.2854 0.1907 +0.0274 +0.0045 -0.0018 -0.0947
Olsen_Astral_3P yeast F vs E 0.4774 0.5552 0.5553 0.5384 0.1941 +0.0778 +0.0001 -0.0169 -0.3443
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6229 0.6989 0.5708 0.2070 0.1941 +0.0445 +0.0761 -0.1281 -0.3639 -0.0129
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1526 0.1660 0.1512 0.0483 0.0446 -0.0103 +0.0134 -0.0147 -0.1029 -0.0036
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8013 0.9497 0.9575 0.2642 0.2935 -0.0030 +0.1483 +0.0078 -0.6933 +0.0294
Olsen_Exploris_3P human B vs A 0.3372 0.3409 0.3454 0.3505 0.1868 0.1841 +0.0037 +0.0045 +0.0051 -0.1637 -0.0026
Olsen_Exploris_3P human D vs C 0.1096 0.1772 0.1685 0.1517 0.0437 0.0423 +0.0676 -0.0087 -0.0168 -0.1080 -0.0014
Olsen_Exploris_3P human F vs E 0.3024 0.3340 0.3402 0.3353 0.1828 0.1839 +0.0316 +0.0062 -0.0049 -0.1526 +0.0011
Olsen_Exploris_3P yeast B vs A 0.6189 0.6096 0.6474 0.5768 0.2176 0.2134 -0.0093 +0.0378 -0.0706 -0.3592 -0.0041
Olsen_Exploris_3P yeast D vs C 0.1498 0.2475 0.2320 0.2479 0.0555 0.0554 +0.0977 -0.0155 +0.0159 -0.1924 -0.0001
Olsen_Exploris_3P yeast F vs E 1.0859 1.1596 1.3578 1.2751 0.4781 0.4132 +0.0737 +0.1982 -0.0827 -0.7970 -0.0649
SCIEX_3P ecoli B vs A 0.5007 0.5328 0.4878 0.4827 0.1067 +0.0321 -0.0450 -0.0051 -0.3760
SCIEX_3P ecoli C vs A 0.5855 0.6055 0.5762 0.5418 0.1398 +0.0200 -0.0293 -0.0344 -0.4020
SCIEX_3P ecoli C vs B 0.1466 0.1534 0.1147 0.1067 0.0736 +0.0068 -0.0387 -0.0080 -0.0331
SCIEX_3P human B vs A 0.1942 0.2132 0.1548 0.1520 0.0852 +0.0190 -0.0584 -0.0028 -0.0668
SCIEX_3P human C vs A 0.2171 0.2452 0.1974 0.1943 0.0942 +0.0281 -0.0478 -0.0031 -0.1001
SCIEX_3P human C vs B 0.1705 0.1978 0.1377 0.1340 0.0862 +0.0273 -0.0601 -0.0037 -0.0478
SCIEX_3P yeast B vs A 0.2341 0.2472 0.1858 0.1850 0.0882 +0.0130 -0.0614 -0.0008 -0.0968
SCIEX_3P yeast C vs A 0.5719 0.6338 0.5883 0.5740 0.1464 +0.0619 -0.0455 -0.0143 -0.4277
SCIEX_3P yeast C vs B 0.4881 0.5568 0.5075 0.4971 0.1170 +0.0688 -0.0494 -0.0103 -0.3801

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ v0.6.7 vs v0.6.4 Δ v0.7.0 vs v0.6.7 Δ v0.7.4 vs v0.7.0 Δ develop vs v0.7.4 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1444 0.1262 0.1208 0.0500 0.0505 +0.0149 -0.0182 -0.0054 -0.0708 +0.0005
MTAC_3P_Alternating human A vs B 0.0731 0.0766 0.0771 0.0815 0.0344 0.0341 +0.0035 +0.0005 +0.0043 -0.0470 -0.0003
MTAC_3P_Alternating yeast A vs B 0.1300 0.1143 0.1039 0.1122 0.0441 0.0470 -0.0157 -0.0104 +0.0083 -0.0681 +0.0029
MTAC_3P_Standard ecoli A vs B 0.1320 0.1278 0.1280 0.1196 0.0473 0.0463 -0.0042 +0.0002 -0.0084 -0.0724 -0.0009
MTAC_3P_Standard human A vs B 0.0679 0.0711 0.0681 0.0716 0.0384 0.0359 +0.0032 -0.0030 +0.0035 -0.0332 -0.0025
MTAC_3P_Standard yeast A vs B 0.1262 0.1262 0.1335 0.1254 0.0503 0.0507 +0.0000 +0.0073 -0.0081 -0.0751 +0.0004
Olsen_Astral_3P ecoli B vs A 0.1924 0.2326 0.2190 0.2657 0.0480 +0.0402 -0.0136 +0.0467 -0.2177
Olsen_Astral_3P ecoli D vs C 0.1089 0.1405 0.1197 0.1086 0.0727 +0.0316 -0.0208 -0.0112 -0.0359
Olsen_Astral_3P ecoli F vs E 0.3405 0.4711 0.4575 0.3928 0.1322 +0.1306 -0.0136 -0.0647 -0.2606
Olsen_Astral_3P human B vs A 0.0420 0.0451 0.0485 0.0465 0.0211 +0.0032 +0.0034 -0.0021 -0.0254
Olsen_Astral_3P human D vs C 0.0549 0.0659 0.0612 0.0625 0.0432 +0.0110 -0.0047 +0.0013 -0.0193
Olsen_Astral_3P human F vs E 0.0528 0.0583 0.0583 0.0620 0.0244 +0.0055 -0.0000 +0.0038 -0.0377
Olsen_Astral_3P yeast B vs A 0.0563 0.0589 0.0668 0.0632 0.0272 +0.0026 +0.0079 -0.0036 -0.0359
Olsen_Astral_3P yeast D vs C 0.0483 0.0497 0.0503 0.0513 0.0404 +0.0015 +0.0006 +0.0010 -0.0109
Olsen_Astral_3P yeast F vs E 0.0959 0.1255 0.1233 0.1208 0.0373 +0.0296 -0.0022 -0.0025 -0.0834
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2180 0.2632 0.2277 0.0493 0.0496 +0.0146 +0.0452 -0.0355 -0.1784 +0.0002
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0579 0.0517 0.0486 0.0197 0.0180 -0.0057 -0.0062 -0.0031 -0.0289 -0.0017
Olsen_Exploris_3P ecoli F vs E 0.4584 0.3290 0.4916 0.5005 0.0664 0.0634 -0.1294 +0.1626 +0.0090 -0.4341 -0.0031
Olsen_Exploris_3P human B vs A 0.0646 0.0600 0.0674 0.0691 0.0343 0.0336 -0.0046 +0.0074 +0.0016 -0.0348 -0.0007
Olsen_Exploris_3P human D vs C 0.0301 0.0410 0.0343 0.0433 0.0096 0.0090 +0.0109 -0.0066 +0.0090 -0.0337 -0.0006
Olsen_Exploris_3P human F vs E 0.0759 0.0706 0.0798 0.0824 0.0356 0.0348 -0.0053 +0.0093 +0.0025 -0.0468 -0.0008
Olsen_Exploris_3P yeast B vs A 0.2336 0.2170 0.2340 0.2174 0.0646 0.0828 -0.0166 +0.0170 -0.0166 -0.1528 +0.0181
Olsen_Exploris_3P yeast D vs C 0.0715 0.0783 0.0777 0.0738 0.0211 0.0190 +0.0068 -0.0006 -0.0039 -0.0527 -0.0021
Olsen_Exploris_3P yeast F vs E 0.5309 0.4419 0.4386 0.4304 0.1594 0.0911 -0.0891 -0.0032 -0.0082 -0.2710 -0.0682
SCIEX_3P ecoli B vs A 0.2191 0.2872 0.2279 0.2223 0.0546 +0.0682 -0.0593 -0.0056 -0.1677
SCIEX_3P ecoli C vs A 0.2647 0.3315 0.2466 0.2435 0.0697 +0.0668 -0.0849 -0.0031 -0.1738
SCIEX_3P ecoli C vs B 0.0574 0.0687 0.0330 0.0528 0.0337 +0.0113 -0.0357 +0.0198 -0.0190
SCIEX_3P human B vs A 0.0657 0.0603 0.0448 0.0488 0.0241 -0.0054 -0.0154 +0.0040 -0.0247
SCIEX_3P human C vs A 0.0731 0.0720 0.0496 0.0608 0.0264 -0.0011 -0.0225 +0.0112 -0.0344
SCIEX_3P human C vs B 0.0556 0.0651 0.0470 0.0457 0.0233 +0.0094 -0.0181 -0.0013 -0.0224
SCIEX_3P yeast B vs A 0.1098 0.0964 0.0764 0.0675 0.0337 -0.0134 -0.0199 -0.0090 -0.0338
SCIEX_3P yeast C vs A 0.2938 0.3209 0.2538 0.2592 0.0518 +0.0271 -0.0671 +0.0055 -0.2075
SCIEX_3P yeast C vs B 0.2531 0.3033 0.2534 0.2754 0.0345 +0.0501 -0.0498 +0.0220 -0.2410

Metric: runtime

Dataset v0.6.4 v0.6.7 v0.7.0 v0.7.4 develop current Δ current vs v0.6.4 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs v0.7.4 Δ current vs develop % current vs v0.6.4 % current vs v0.6.7 % current vs v0.7.0 % current vs v0.7.4 % current vs develop
APMS_Astral 247.2300 331.1700 190.8900 176.4300 88.0500
KEAP1KO_Eclipse 24.0700 17.3200 19.8700 17.1300 16.9800 15.6400 -8.4300 -1.6800 -4.2300 -1.4900 -1.3400 -35.0229% -9.6998% -21.2884% -8.6982% -7.8916%
MTAC_3P_Alternating 12.7500 9.0700 8.3600 9.2900 7.2000 7.1600 -5.5900 -1.9100 -1.2000 -2.1300 -0.0400 -43.8431% -21.0584% -14.3541% -22.9279% -0.5556%
MTAC_3P_Standard 12.3100 8.9600 9.6600 10.8100 8.2600 8.3900 -3.9200 -0.5700 -1.2700 -2.4200 +0.1300 -31.8440% -6.3616% -13.1470% -22.3867% +1.5738%
MTAC_Yeast_Alternating_3min 4.2300 4.4100 4.9400 4.0600 4.6200 +0.3900 +0.2100 -0.3200 +0.5600 +9.2199% +4.7619% -6.4777% +13.7931%
MTAC_Yeast_Alternating_5min 5.3800 4.3800 4.7500 4.5400 4.3100 4.2400 -1.1400 -0.1400 -0.5100 -0.3000 -0.0700 -21.1896% -3.1963% -10.7368% -6.6079% -1.6241%
MTAC_Yeast_Standard_3min 5.4300 4.1400 4.4400 4.6600 4.3400 4.6300 -0.8000 +0.4900 +0.1900 -0.0300 +0.2900 -14.7330% +11.8357% +4.2793% -0.6438% +6.6820%
MTAC_Yeast_Standard_5min 5.5500 4.4200 4.5300 4.4600 4.3200 4.9400 -0.6100 +0.5200 +0.4100 +0.4800 +0.6200 -10.9910% +11.7647% +9.0508% +10.7623% +14.3519%
Olsen_Astral_3P 76.4000 62.9200 70.0100 64.7500 45.7900
Olsen_Exploris_3P 27.6600 19.7600 18.3200 19.2800 13.5300 14.8100 -12.8500 -4.9500 -3.5100 -4.4700 +1.2800 -46.4570% -25.0506% -19.1594% -23.1846% +9.4605%
SCIEX_3P 30.2900 25.6900 26.5600 29.3700 15.9300
SCP_Astral_1000pg_12ms 5.7900 4.5900 4.6500 4.0900 4.3600 4.5100 -1.2800 -0.0800 -0.1400 +0.4200 +0.1500 -22.1071% -1.7429% -3.0108% +10.2689% +3.4404%
SCP_Astral_1000pg_24ms 6.2600 4.4000 5.8800 4.8800 4.9200 -1.3400 +0.5200 -0.9600 +0.0400 -21.4058% +11.8182% -16.3265% +0.8197%
SCP_Astral_1000pg_3ms 4.5200 3.7300 4.8000 3.6400 4.9100 4.5200 +0 +0.7900 -0.2800 +0.8800 -0.3900 +0% +21.1796% -5.8333% +24.1758% -7.9430%
SCP_Astral_1000pg_6ms 5.7400 3.5100 3.9200 3.4400 3.8200 3.9600 -1.7800 +0.4500 +0.0400 +0.5200 +0.1400 -31.0105% +12.8205% +1.0204% +15.1163% +3.6649%
SCP_Astral_10ng_12ms 7.0700 5.5300 5.5100 5.7400 6.2600 5.0700 -2 -0.4600 -0.4400 -0.6700 -1.1900 -28.2885% -8.3183% -7.9855% -11.6725% -19.0096%
SCP_Astral_10ng_24ms 7.5900 5.7300 6.1400 5.5400 5.3400 5.5800 -2.0100 -0.1500 -0.5600 +0.0400 +0.2400 -26.4822% -2.6178% -9.1205% +0.7220% +4.4944%
SCP_Astral_10ng_3ms 6.4500 4.6700 4.3000 4.4100 4.9200 5 -1.4500 +0.3300 +0.7000 +0.5900 +0.0800 -22.4806% +7.0664% +16.2791% +13.3787% +1.6260%
SCP_Astral_10ng_6ms 7.3800 4.9300 4.6300 5.6200 4.8700 5.1600 -2.2200 +0.2300 +0.5300 -0.4600 +0.2900 -30.0813% +4.6653% +11.4471% -8.1851% +5.9548%
SCP_Astral_250pg_12ms 4.7400 3.6600 3.3900 4.2600 4.0400 -0.7000 +0.3800 +0.6500 -0.2200 -14.7679% +10.3825% +19.1740% -5.1643%
SCP_Astral_250pg_24ms 5.2600 3.8400 3.7600 4.2200 4.4600 -0.8000 +0.6200 +0.7000 +0.2400 -15.2091% +16.1458% +18.6170% +5.6872%
SCP_Astral_250pg_3ms 4.6500 3.4300 3.7100 3.4500 3.7200 4.1300 -0.5200 +0.7000 +0.4200 +0.6800 +0.4100 -11.1828% +20.4082% +11.3208% +19.7101% +11.0215%
SCP_Astral_250pg_6ms 4.1700 3.2900 3.6900 3.2700 4.4700 4.2800 +0.1100 +0.9900 +0.5900 +1.0100 -0.1900 +2.6379% +30.0912% +15.9892% +30.8869% -4.2506%
SCP_Astral_500pg_12ms 5.2800 3.5300 3.6000 3.4900 4.0900 4.1100 -1.1700 +0.5800 +0.5100 +0.6200 +0.0200 -22.1591% +16.4306% +14.1667% +17.7650% +0.4890%
SCP_Astral_500pg_24ms 5.5100 3.8200 4.1500 4.8100 4.5700 4.4800 -1.0300 +0.6600 +0.3300 -0.3300 -0.0900 -18.6933% +17.2775% +7.9518% -6.8607% -1.9694%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5700 4.3000 4.4400 -0.2900 +0.9800 +0.8700 +0.1400 -6.1311% +28.3237% +24.3697% +3.2558%
SCP_Astral_500pg_6ms 4.6500 3.6200 3.7300 3.7800 4.3800 4.3800 -0.2700 +0.7600 +0.6500 +0.6000 +0 -5.8065% +20.9945% +17.4263% +15.8730% +0%
SCP_Astral_MBR 9.0400 6.5500 6.1000 7.1800 6.5500 -2.4900 +0 +0.4500 -0.6300 -27.5442% +0% +7.3770% -8.7744%
Seer_Astral_45 100.3500 65.6700 60.0400 48.7000 75.3400
Seer_Astral_single 4.4700 4.1400 5.5800 4.1600 5.0700 +0.6000 +0.9300 -0.5100 +0.9100 +13.4228% +22.4638% -9.1398% +21.8750%
YEAST_KO_Astral 235.6300 252.0700 163.6800 143.2300 138.3000
EWZ_2P_MBR_Exploris 26.1800 19.2600 19.2100 -6.9700 -0.0500 -26.6234% -0.2596%
EWZ_2P_MBR_Exploris_Human 12.9100 11.2700 12.0600 -0.8500 +0.7900 -6.5840% +7.0098%
EWZ_2P_MBR_Exploris_YeastHuman 12.0600 11.9800 11.4800 -0.5800 -0.5000 -4.8093% -4.1736%
MacCoss_Eclipse_Normalization_noNorm 27.5100 30.4300 28.0100 +0.5000 -2.4200 +1.8175% -7.9527%
MacCoss_Eclipse_Normalization_yesNorm 27.6700 29.7300 29.7500 +2.0800 +0.0200 +7.5172% +0.0673%

EWZ_2P_MBR_Exploris

GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj1.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj10.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj11.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png
GO113_DIA_MBRAnalysis_HelaStd_200ngperuL_Inj12.png

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

EWZ_2P_MBR_Exploris_Human

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

EWZ_2P_MBR_Exploris_YeastHuman

Inj1.png
Inj1.png
Inj10.png
Inj10.png
Inj11.png
Inj11.png
Inj12.png
Inj12.png

KEAP1KO_Eclipse

MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5111_DDA_H358_Rep1_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5112_DDA_H358_Rep2_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5113_DDA_H358_Rep3_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png
MA5114_DDA_H358_KEAP1KO_Rep1_EWZ_ES_DIA.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard

Sample-A_Rep1.png
Sample-A_Rep1.png
Sample-A_Rep2.png
Sample-A_Rep2.png
Sample-A_Rep3.png
Sample-A_Rep3.png
Sample-B_Rep1.png
Sample-B_Rep1.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min

Rep1.png
Rep1.png
Rep2.png
Rep2.png
Rep3.png
Rep3.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_noNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

MacCoss_Eclipse_Normalization_yesNorm

012_BYPP2p0_1_A1.png
012_BYPP2p0_1_A1.png
013_BYPP1p0_1_A2.png
013_BYPP1p0_1_A2.png
014_BYPP0p25_1_A3.png
014_BYPP0p25_1_A3.png
015_BYPP1p5_1_A4.png
015_BYPP1p5_1_A4.png

Olsen_Exploris_3P

E10H50Y40_1.png
E10H50Y40_1.png
E10H50Y40_2.png
E10H50Y40_2.png
E10H50Y40_3.png
E10H50Y40_3.png
E10H50Y40_4.png
E10H50Y40_4.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms

3msIT_3p4mz_1.png
3msIT_3p4mz_1.png
3msIT_3p4mz_2.png
3msIT_3p4mz_2.png
6msIT_6p8mz_1.png
6msIT_6p8mz_1.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms

2.png
2.png
3.png
3.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms

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1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms

1.png
1.png
2.png
2.png
3.png
3.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR

0p25ng_1.png
0p25ng_1.png
0p25ng_2.png
0p25ng_2.png
0p25ng_3.png
0p25ng_3.png
10ng_1.png
10ng_1.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single

1.png
1.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png